Citrus Sinensis ID: 045247

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MVRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHcccccccEEEEcHHHHHHHHcccccccccccccccccEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEcEEcccccEEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHEccccccccccEEEcHHHHHHHHccccccccccccccccccEEEcEcccccEEEEEEccccccccHHHHHHHHHHHHHHHcHHHHHHHcccccccccEEEEEEcccccc
Coil and Loop (DISEMBL)
MVRNGATVLKELIAsshgkynpyrifSAKELEIatnnydereviKQCDFYITKLYKGFWQERLISVLKFdeslpdsvykySINNIVYAAQMDHKHILKLIGccletpipilvfeygeyrtl
Flexible Loop (DISEMBL)
MVRNGATVLKELiasshgkynpyRIFSAKELEIAtnnyderevIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL
Low Complexity Region (SEG)
MVRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL
Disordered region (IsUnstruct)
*******VLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY***
Disordered Region (DISOPRED)
**RNGATVLK*************RIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDE*******KYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRT*
Disordered Region (DISEMBL)
MVRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL
Disordered Region (DISPRO)
****GATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
Q7X8C5	748	Wall-associated receptor	no	no	0.917	0.148	0.380	8e-17
Q8GXQ3	642	Wall-associated receptor	no	no	0.917	0.172	0.380	1e-16
Q9S9M2	761	Wall-associated receptor	no	no	0.917	0.145	0.371	2e-16
Q9LMT9	764	Putative wall-associated	no	no	0.909	0.143	0.359	3e-16
Q9SA25	720	Wall-associated receptor	no	no	0.966	0.162	0.327	8e-16
Q9LN59	788	Putative wall-associated	no	no	0.917	0.140	0.345	2e-15
Q8RY17	751	Wall-associated receptor	no	no	0.917	0.147	0.371	2e-15
Q9S9M5	730	Wall-associated receptor	no	no	0.917	0.152	0.380	3e-15
Q9S9M1	731	Wall-associated receptor	no	no	0.917	0.151	0.368	1e-14
Q9S9M3	730	Wall-associated receptor	no	no	0.917	0.152	0.371	1e-14

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 71/113 (62%), Gaps = 2/113 (1%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
           RNG  +LK+ +A   G     RIFS+ ELE AT+N+++  V+ Q       +YKG   + 
Sbjct: 381 RNGGMLLKQQLARKEGNVEMSRIFSSHELEKATDNFNKNRVLGQGG--QGTVYKGMLVDG 438

Query: 63  LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
            I  +K  +++ +   +  IN +V  AQ++H++I+KL+GCCLET +P+LV+E+
Sbjct: 439 RIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEF 491

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q8GXQ3|WAKLF_ARATH Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=2

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 71/113 (62%), Gaps = 2/113 (1%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
           RNG  +LK+ + + +G  +  RIFS+KEL+ AT+N+    V+ Q       +YKG   E 
Sbjct: 397 RNGGLLLKQQLITKNGNVDMSRIFSSKELKKATDNFSMNRVLGQGG--QGTVYKGMLAEG 454

Query: 63  LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
            I  +K  + + +   +  IN +V  +Q++H++I+KL+GCCLET +P+LV+EY
Sbjct: 455 RIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLETEVPVLVYEY 507

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 70/113 (61%), Gaps = 2/113 (1%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
           RNG  +LK+ +A   G     +IFS+ ELE AT+N++   V+ Q       +YKG   + 
Sbjct: 389 RNGGMLLKQQLARKEGNVEMSKIFSSNELEKATDNFNTNRVLGQGG--QGTVYKGMLVDG 446

Query: 63  LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
            I  +K  +++ +   +  IN +V  AQ++H++I+KL+GCCLET +P+LV+E+
Sbjct: 447 RIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEF 499

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Plays a role in plant mineral nutrients response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMT9|WAKLL_ARATH Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 76/114 (66%), Gaps = 4/114 (3%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE- 61
           RNG  +L++ + ++ G+    ++FS++ELE AT+N+++  VI Q       +YKG   + 
Sbjct: 419 RNGGLLLQQQLNTTQGRVEKTKLFSSRELEKATDNFNDNRVIGQGG--QGTVYKGMLVDG 476

Query: 62  RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
           R ++V K +    D + ++ IN ++  +Q++H+H++KL+GCCLET +PILV+E+
Sbjct: 477 RSVAVKKSNVVDEDKLQEF-INEVIILSQINHRHVVKLLGCCLETEVPILVYEF 529

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 74/119 (62%), Gaps = 2/119 (1%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
           RNG  +L++  +  HG  N  ++FS+ +LE AT+ ++   ++ Q       +YKG  ++ 
Sbjct: 355 RNGGLLLQQQTSFLHGSVNRTKVFSSNDLENATDRFNASRILGQGG--QGTVYKGMLEDG 412

Query: 63  LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
           +I  +K  ++L +   +  IN I+  +Q++H++++K++GCCLET +PILV+E+   R L
Sbjct: 413 MIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNL 471

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LN59|WAKLK_ARATH Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 69/113 (61%), Gaps = 2/113 (1%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
           RNG  +L++ + ++ G     RIFS++ELE AT+N+ E  ++ Q       +YKG   + 
Sbjct: 416 RNGGLLLQQQLNTNKGNVEKTRIFSSRELEKATDNFSESRILGQGG--QGTVYKGMLVDG 473

Query: 63  LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
               +K  + + +   +  IN +V  +Q++H+H++KL+GCCLET +P LV+E+
Sbjct: 474 RTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEF 526

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RY17|WAKLI_ARATH Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 2/113 (1%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
           RNG  +LK+ + +  G     +IFS+KELE AT+N++   V+ Q       +YKG   + 
Sbjct: 386 RNGGLLLKQQLTTRGGNVQSSKIFSSKELEKATDNFNMNRVLGQGG--QGTVYKGMLVDG 443

Query: 63  LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
            I  +K  + L +   +  IN +   +Q++H++I+KL+GCCLET +PILV+E+
Sbjct: 444 RIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEH 496

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Required during plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 2/113 (1%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
           RNG  +LK+ + +  G     +IFS+KEL  AT+N+    V+ Q       +YKG   + 
Sbjct: 394 RNGGLLLKQQLTTKDGNVEMSKIFSSKELRKATDNFSIDRVLGQGG--QGTVYKGMLVDG 451

Query: 63  LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
            I  +K  + + +   +  IN IV  +Q++H++I+KL+GCCLET +PILV+EY
Sbjct: 452 SIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEY 504

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M1|WAKLE_ARATH Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 72/114 (63%), Gaps = 3/114 (2%)

Query: 3   RNGATVLKE-LIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE 61
           RNG  +LK+ L  ++ G  +  R+FS++EL+ AT+N+  + V+ +       +YKG   +
Sbjct: 396 RNGGLLLKQQLTTTNDGNVDMSRLFSSEELKKATDNFSVKRVLGK--GSQGTVYKGMMVD 453

Query: 62  RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
             I  +K  + + +   +  IN I+  +Q++H++I+KLIGCCLET +PILV+EY
Sbjct: 454 GKIIAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEY 507

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. May be involved in plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 2/113 (1%)

Query: 3   RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
           RNG  +LK+ + +  G     +IFS++ELE AT+N+    V+ Q       +YK    + 
Sbjct: 393 RNGGLLLKQQLTTKDGSVEMSKIFSSRELEKATDNFSIDRVLGQGG--QGTVYKRMLVDG 450

Query: 63  LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
            I  +K  + + +   +  IN IV  +Q++H++I+KL+GCCLET +PILV+EY
Sbjct: 451 SIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEY 503

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
255582635	331	receptor protein kinase, putative [Ricin	0.942	0.344	0.546	2e-24
224123144	344	predicted protein [Populus trichocarpa]	0.909	0.319	0.504	1e-21
255542662	330	serine-threonine protein kinase, plant-t	0.933	0.342	0.478	1e-20
255542676	247	serine-threonine protein kinase, plant-t	0.966	0.473	0.442	6e-20
255542658	356	serine-threonine protein kinase, plant-t	0.933	0.317	0.449	7e-20
255542656	331	serine-threonine protein kinase, plant-t	0.933	0.341	0.432	2e-18
359493231	497	PREDICTED: inactive serine/threonine-pro	0.925	0.225	0.417	5e-18
302143512	252	unnamed protein product [Vitis vinifera]	0.900	0.432	0.454	7e-18
296081092	1111	unnamed protein product [Vitis vinifera]	0.925	0.100	0.417	9e-18
4678272	372	putative protein [Arabidopsis thaliana]	0.966	0.314	0.421	6e-16

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 80/119 (67%), Gaps = 5/119 (4%)

Query: 4   NGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERL 63
           NG  +L++LIAS  G+ NP RIFSA EL  AT++YD R++I Q   Y  KLY G   ER 
Sbjct: 15  NGRMLLEKLIASCDGRCNPIRIFSADELSRATDDYDPRKIITQDSGY--KLYNGLLHERT 72

Query: 64  ISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEYRTL 121
           ISV KF +      YKY  N+I++A QM  HK+ LKL+GCCLET IP+LVFE  EY TL
Sbjct: 73  ISVKKFKDK--SEQYKYCYNDIMFATQMSKHKNFLKLLGCCLETQIPVLVFEPIEYGTL 129

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/115 (50%), Positives = 78/115 (67%), Gaps = 5/115 (4%)

Query: 2   VRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE 61
           ++NG+ +L++L+    GK N  R FSA EL+ ATNNYD ++++     Y  KLYKGF Q 
Sbjct: 20  IKNGSKLLEKLVDICDGKCNSIRSFSATELKKATNNYDPQKILTGDSGY--KLYKGFLQG 77

Query: 62  RLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEY 115
           R +SV KF +   D  Y+Y  N+IVYA++M  HK  +KL+GCCLE  IPILVFEY
Sbjct: 78  RPVSVKKFKDD--DEQYEYCFNDIVYASKMSVHKSFMKLLGCCLEARIPILVFEY 130

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 6/119 (5%)

Query: 4   NGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERL 63
           NG+ +L++ +A  +G+ NP R FS++ELE AT NY+E++V+K   ++  +LYKGF Q+R 
Sbjct: 10  NGSKLLEKSVAFCNGRCNPIRNFSSEELEKATRNYNEKQVLKLDGYF--ELYKGFLQDRP 67

Query: 64  ISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEYRTL 121
           + V KF   L   V + +IN IVYA+ M  H + +KL+GCCLETP PILVFE  + +TL
Sbjct: 68  VIVKKF---LEVGVEQLAINEIVYASAMSVHINSIKLLGCCLETPSPILVFESAKEKTL 123

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542676|ref|XP_002512401.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548362|gb|EEF49853.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  101 bits (252), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 84/122 (68%), Gaps = 5/122 (4%)

Query: 1   MVRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQ 60
           ++RNG  +L++ IA ++G+ NP R FS +EL+ ATN+Y +  VI +  ++    YKGF +
Sbjct: 8   LMRNGGILLEKSIAFNNGRGNPIRCFSVEELQTATNSYSQNNVIYEGGWHTH--YKGFLR 65

Query: 61  ERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEYR 119
           ER + V ++  ++ + V    IN+IV+A++M  HK++LKL+GCCLE+ IPILVFEY E  
Sbjct: 66  ERPVIVKRYRTNIHERVC--PINDIVFASEMSRHKNVLKLLGCCLESEIPILVFEYAEKG 123

Query: 120 TL 121
            L
Sbjct: 124 NL 125

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 83/118 (70%), Gaps = 5/118 (4%)

Query: 1   MVRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQ 60
           ++RNG  +L++ IA ++G+ NP R FS  EL+ ATN+Y +  VI +  ++   LYKGF +
Sbjct: 16  LMRNGGILLEKSIAFNNGRGNPIRWFSVDELQTATNSYSQNNVIYEGGWHT--LYKGFLR 73

Query: 61  ERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGE 117
           +R + V ++  ++ + V    IN+IV+A++M  HK++LKL+GCCLE+ IPILVFEY E
Sbjct: 74  DRPVIVKRYRNNIHERVC--PINDIVFASEMSRHKNVLKLLGCCLESEIPILVFEYAE 129

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542656|ref|XP_002512391.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548352|gb|EEF49843.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 83/125 (66%), Gaps = 12/125 (9%)

Query: 1   MVRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYIT---KLYKG 57
           ++RNG ++L++ +A ++G+ NP R FS KEL+ ATN+Y +  V     FYI    +LYKG
Sbjct: 14  LMRNGRSLLEKSVALNNGRGNPVRCFSVKELQNATNSYSQHNV-----FYIDGTCRLYKG 68

Query: 58  FWQERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYG 116
             ++R + V K+D   P    +  +++IV A++M  H+++LKL+GCCLE+ IPI VFEY 
Sbjct: 69  LIRDRPVIVKKYDYKHPS---EDPVSDIVIASEMSVHRNVLKLLGCCLESEIPIPVFEYA 125

Query: 117 EYRTL 121
           E  TL
Sbjct: 126 EKGTL 130

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493231|ref|XP_002265528.2| PREDICTED: inactive serine/threonine-protein kinase At1g67470-like [Vitis vinifera]

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 75/115 (65%), Gaps = 3/115 (2%)

Query: 2   VRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE 61
           ++NG+ +L++L++S +G+ NP R FS KELE ATN Y+   +  +  +  ++ YKG  + 
Sbjct: 10  LKNGSLLLEKLVSSLNGRSNPIRNFSIKELEQATNKYNSSLIFDRWTY--SEWYKGSLEG 67

Query: 62  RLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEY 115
           R +SV KF   + D+  +  I  I +A Q+  HK++LKL GCCLET  P+LV+EY
Sbjct: 68  RFVSVRKFHPVIDDAFLERVIKEITFATQLSAHKNVLKLFGCCLETQTPVLVYEY 122

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143512|emb|CBI22073.3| unnamed protein product [Vitis vinifera]

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 75/121 (61%), Gaps = 12/121 (9%)

Query: 2   VRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE 61
           ++NG+ +L++L+ S +GK NP R FS KEL+ ATNNY     +    +Y  K YKG   +
Sbjct: 10  LKNGSLLLEKLVCSFNGKSNPIRYFSDKELQKATNNYSSALDLHDSGYY--KCYKGSVDD 67

Query: 62  RLISVLKFDESLPDSVYKYS------INNIVYAAQMD-HKHILKLIGCCLETPIPILVFE 114
           RLI V KFD   P+  Y +       IN I  A QM  HK++LKL+GCCLET +P LV+E
Sbjct: 68  RLICVRKFD---PNYRYPFEGPLERIINEIAIATQMSAHKNVLKLLGCCLETQLPTLVYE 124

Query: 115 Y 115
           +
Sbjct: 125 F 125

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081092|emb|CBI18286.3| unnamed protein product [Vitis vinifera]

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 75/115 (65%), Gaps = 3/115 (2%)

Query: 2   VRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE 61
           ++NG+ +L++L++S +G+ NP R FS KELE ATN Y+   +  +  +  ++ YKG  + 
Sbjct: 624 LKNGSLLLEKLVSSLNGRSNPIRNFSIKELEQATNKYNSSLIFDRWTY--SEWYKGSLEG 681

Query: 62  RLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEY 115
           R +SV KF   + D+  +  I  I +A Q+  HK++LKL GCCLET  P+LV+EY
Sbjct: 682 RFVSVRKFHPVIDDAFLERVIKEITFATQLSAHKNVLKLFGCCLETQTPVLVYEY 736

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4678272|emb|CAB41180.1| putative protein [Arabidopsis thaliana]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 75/121 (61%), Gaps = 4/121 (3%)

Query: 2   VRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE 61
           ++NG  +L+ELIAS  GK NP R FS+ ++  AT+N+ E  +I    ++I   YKG  +E
Sbjct: 51  LKNGGILLEELIASFDGKTNPIRCFSSDQILKATDNFSESRIISSWGYFI--WYKGVIEE 108

Query: 62  RLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEYRT 120
           R +S+ K+  S   S +  +  +I  ++QM  HK+ LKLIGCCLE  +P LV EY E+  
Sbjct: 109 RQVSIKKW-SSQNLSSFTEAYRDISVSSQMSGHKNALKLIGCCLEFDLPALVCEYTEHGP 167

Query: 121 L 121
           L
Sbjct: 168 L 168

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
TAIR|locus:2076646	334	AT3G57750 [Arabidopsis thalian	0.966	0.350	0.413	5.1e-18
TAIR|locus:2076596	340	AT3G57700 [Arabidopsis thalian	0.942	0.335	0.421	2.3e-17
TAIR|locus:2076671	355	AT3G57730 [Arabidopsis thalian	0.975	0.332	0.385	1.1e-16
TAIR|locus:2076586	351	AT3G57710 [Arabidopsis thalian	0.933	0.321	0.378	3.1e-16
TAIR|locus:2079959	351	AT3G52530 [Arabidopsis thalian	0.900	0.310	0.4	6.7e-16
TAIR|locus:2200527	642	WAKL6 "wall associated kinase-	0.917	0.172	0.380	9.3e-16
TAIR|locus:2200562	748	WAKL2 "wall associated kinase-	0.917	0.148	0.380	9.4e-16
TAIR|locus:2030988	764	AT1G17910 [Arabidopsis thalian	0.909	0.143	0.359	1.6e-15
TAIR|locus:2032875	720	AT1G16260 [Arabidopsis thalian	0.966	0.162	0.327	5e-15
TAIR|locus:2076681	359	AT3G57720 [Arabidopsis thalian	0.933	0.314	0.398	5.9e-15

TAIR|locus:2076646 AT3G57750 [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 5.1e-18, P = 5.1e-18
 Identities = 50/121 (41%), Positives = 74/121 (61%)

Query:     2 VRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE 61
             ++NG  +L+ELIAS  GK NP R FS+ ++  AT+N+ E  +I    ++I   YKG  +E
Sbjct:    13 LKNGGILLEELIASFDGKTNPIRCFSSDQILKATDNFSESRIISSWGYFIW--YKGVIEE 70

Query:    62 RLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEYRT 120
             R +S+ K+      S +  +  +I  ++QM  HK+ LKLIGCCLE  +P LV EY E+  
Sbjct:    71 RQVSIKKWSSQNLSS-FTEAYRDISVSSQMSGHKNALKLIGCCLEFDLPALVCEYTEHGP 129

Query:   121 L 121
             L
Sbjct:   130 L 130

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2076596 AT3G57700 [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 2.3e-17, P = 2.3e-17
 Identities = 51/121 (42%), Positives = 78/121 (64%)

Query:     3 RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
             +NG+ +L+ELIA+S G YNP R FS+ ++  ATN++D   VI + D ++   YKG  + R
Sbjct:    21 KNGSLLLEELIATSGGIYNPIRTFSSDQILQATNHFDWNYVISE-DRFVW--YKGMIENR 77

Query:    63 LISVLKFDE-SLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEYRT 120
              + + KF + S+ D+   Y   +I  ++ M  HK++LKL+GCCLE P P+LV EY E+  
Sbjct:    78 PVLIKKFQDCSVFDADNFY--RDIAVSSLMSSHKNVLKLLGCCLEFPRPVLVCEYPEHGA 135

Query:   121 L 121
             L
Sbjct:   136 L 136

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2076671 AT3G57730 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 47/122 (38%), Positives = 71/122 (58%)

Query:     2 VRNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE 61
             + NG+  LKELI   +GK  P R F++ ++  AT N+D    + +  FYI   YKG  ++
Sbjct:    31 LENGSIFLKELIVDCNGKSIPIRSFTSSQIRKATKNFDLSCFVAEEGFYIW--YKGVIED 88

Query:    62 RLISVLKFDE-SLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYGEYR 119
             R   + +F E  + D        +IV +A+M +H + LKL+GCCLE P P+LVFE+ E+ 
Sbjct:    89 RSYMIKRFSEYKVTDYRVSEVYKDIVLSARMSNHNNFLKLLGCCLEFPFPVLVFEFAEHG 148

Query:   120 TL 121
              L
Sbjct:   149 VL 150

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076586 AT3G57710 [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 45/119 (37%), Positives = 73/119 (61%)

Query:     4 NGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERL 63
             NG+  L+EL+A  +GK  P R FS +++  ATNN+D    + Q  +Y  K Y+G  ++R 
Sbjct:    26 NGSIFLRELVADCNGKSIPIRSFSPEQILKATNNFDSSCFVSQDVYY--KWYRGEIEDRS 83

Query:    64 ISVLKFDES-LPDSVYKYS--INNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYGEY 118
               + +F E  +    ++     N+IV +A+M +H + L+L+GCCLE P P+LVFE+ E+
Sbjct:    84 YMIKRFSEDEITGKRHRVKEVYNDIVLSARMSNHSNFLQLLGCCLEFPFPVLVFEFAEH 142

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079959 AT3G52530 [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 6.7e-16, P = 6.7e-16
 Identities = 48/120 (40%), Positives = 75/120 (62%)

Query:     3 RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
             +NG+ + +ELIA S GKYNP R+FS+ ++  ATNN+D   +I + D +I   YKG  +ER
Sbjct:    17 KNGSLLHEELIACSDGKYNPIRMFSSDQILKATNNFDADHIIAK-DRFIW--YKGTIEER 73

Query:    63 LISVLKFDE-----SLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGE 117
              + + K++      S P++VY+   +  V +    HK++LKL+GCC+E   P+LV E  E
Sbjct:    74 RVLIKKWEGDYVLFSSPENVYR---DIAVLSMMSSHKNVLKLLGCCVEFYKPVLVCELAE 130

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2200527 WAKL6 "wall associated kinase-like 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 9.3e-16, P = 9.3e-16
 Identities = 43/113 (38%), Positives = 71/113 (62%)

Query:     3 RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
             RNG  +LK+ + + +G  +  RIFS+KEL+ AT+N+    V+ Q       +YKG   E 
Sbjct:   397 RNGGLLLKQQLITKNGNVDMSRIFSSKELKKATDNFSMNRVLGQGGQ--GTVYKGMLAEG 454

Query:    63 LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
              I  +K  + + +   +  IN +V  +Q++H++I+KL+GCCLET +P+LV+EY
Sbjct:   455 RIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLETEVPVLVYEY 507

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200562 WAKL2 "wall associated kinase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 9.4e-16, P = 9.4e-16
 Identities = 43/113 (38%), Positives = 71/113 (62%)

Query:     3 RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
             RNG  +LK+ +A   G     RIFS+ ELE AT+N+++  V+ Q       +YKG   + 
Sbjct:   381 RNGGMLLKQQLARKEGNVEMSRIFSSHELEKATDNFNKNRVLGQGGQ--GTVYKGMLVDG 438

Query:    63 LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
              I  +K  +++ +   +  IN +V  AQ++H++I+KL+GCCLET +P+LV+E+
Sbjct:   439 RIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEF 491

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2030988 AT1G17910 [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 41/114 (35%), Positives = 76/114 (66%)

Query:     3 RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE- 61
             RNG  +L++ + ++ G+    ++FS++ELE AT+N+++  VI Q       +YKG   + 
Sbjct:   419 RNGGLLLQQQLNTTQGRVEKTKLFSSRELEKATDNFNDNRVIGQGGQ--GTVYKGMLVDG 476

Query:    62 RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
             R ++V K +    D + ++ IN ++  +Q++H+H++KL+GCCLET +PILV+E+
Sbjct:   477 RSVAVKKSNVVDEDKLQEF-INEVIILSQINHRHVVKLLGCCLETEVPILVYEF 529

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2032875 AT1G16260 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 5.0e-15, P = 5.0e-15
 Identities = 39/119 (32%), Positives = 74/119 (62%)

Query:     3 RNGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQER 62
             RNG  +L++  +  HG  N  ++FS+ +LE AT+ ++   ++ Q       +YKG  ++ 
Sbjct:   355 RNGGLLLQQQTSFLHGSVNRTKVFSSNDLENATDRFNASRILGQGGQ--GTVYKGMLEDG 412

Query:    63 LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
             +I  +K  ++L +   +  IN I+  +Q++H++++K++GCCLET +PILV+E+   R L
Sbjct:   413 MIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNL 471

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076681 AT3G57720 [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 5.9e-15, P = 5.9e-15
 Identities = 49/123 (39%), Positives = 71/123 (57%)

Query:     4 NGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERL 63
             NG+  LKELIA  +GK  P R FS+ ++  AT+N+     +    FY+   YKG  ++R 
Sbjct:    36 NGSIFLKELIADCNGKSIPIRNFSSDQILKATSNFGSSCFVTAEGFYVW--YKGIIEDRS 93

Query:    64 ISVLKFDESLPDSVYKYSI----NNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYGEY 118
               + +F E     V +Y +    N IV +A+M +H + LKLIG CLE  +P+LVFEY E+
Sbjct:    94 YMIKRFSEY---KVTQYRVAEVYNEIVLSARMSNHNNFLKLIGFCLEFSLPVLVFEYAEH 150

Query:   119 RTL 121
               L
Sbjct:   151 GVL 153

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XIII000087 hypothetical protein (344 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	121
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.003
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query: 90  QMDHKHILKLIGCCLETPIPILVFEY 115
           ++ H +I++L+G C +     +V EY
Sbjct: 57  KLSHPNIVRLLGVCTQGEPLYIVTEY 82

Length = 258

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEY 118
               H++I+K  G C E   PI+VFEY E+
Sbjct: 63  TNFQHENIVKFYGVCTEGDPPIMVFEYMEH 92

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 90  QMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
           ++ H ++++L+G C E     LV EY E   L
Sbjct: 52  KLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDL 83

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
            ++DH +++KL+G C E     +V EY E   L
Sbjct: 56  RKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDL 88

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
            ++DH +I+KL+G C E    ++V EY     L
Sbjct: 56  RKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDL 88

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 90  QMDHKHILKLIGCCLETPIPIL--VFEYGEYR 119
           Q DH HI+KLIG   E P+ I+  +   GE R
Sbjct: 63  QFDHPHIVKLIGVITENPVWIVMELAPLGELR 94

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 90  QMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
           Q++H H++KL G C +    +L+ EY +Y +L
Sbjct: 59  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 90

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.77
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.59
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.56
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.4
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.4
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.38
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.37
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.35
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.35
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.34
KOG0605	550	consensus NDR and related serine/threonine kinases	99.32
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.28
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.26
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.26
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.25
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.24
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.24
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.23
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.22
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.21
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.21
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.21
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.2
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.2
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.19
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.18
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.18
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.18
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.18
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.17
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.17
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.17
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.17
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.17
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.16
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.15
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.15
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.14
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.14
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.14
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.14
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.14
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.13
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.13
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.13
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.13
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.12
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.12
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.12
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.12
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.11
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.11
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.11
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.11
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.11
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.11
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.1
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.1
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.1
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.1
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.1
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.1
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.1
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.1
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.09
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.09
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.09
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.09
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.09
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.09
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.09
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.09
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.08
KOG0586	596	consensus Serine/threonine protein kinase [General	99.08
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.08
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.08
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.08
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.08
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.08
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.07
PHA02988	283	hypothetical protein; Provisional	99.07
KOG0610	459	consensus Putative serine/threonine protein kinase	99.07
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.07
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.07
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.07
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.07
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.07
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.07
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.06
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.06
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.06
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.06
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.05
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.05
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.05
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.05
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.05
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.05
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.04
PTZ00267	478	NIMA-related protein kinase; Provisional	99.04
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.04
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.04
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.03
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.03
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.03
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.03
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.03
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.03
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.03
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.03
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.03
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.03
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.03
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.03
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.02
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.02
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.02
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.02
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.02
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.02
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.02
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.01
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.01
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.01
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.01
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.01
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.01
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.01
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.01
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.01
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.01
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.99
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.99
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.99
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.99
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.99
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.99
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.99
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.99
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.99
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.98
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.98
KOG0578	550	consensus p21-activated serine/threonine protein k	98.98
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.98
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.98
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.98
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.98
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.98
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.98
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.98
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.97
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.97
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.96
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.96
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.96
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.96
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.96
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.95
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.95
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.95
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.94
KOG0589	426	consensus Serine/threonine protein kinase [General	98.94
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.94
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.94
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.94
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.93
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.93
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.93
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.93
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.92
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.92
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.92
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.92
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.92
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.92
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.92
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.92
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.91
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.91
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.91
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.91
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.9
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.9
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.9
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.9
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.9
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.9
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.9
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.9
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.9
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.89
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	98.89
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.89
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.89
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.89
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.89
PRK09188	365	serine/threonine protein kinase; Provisional	98.89
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.89
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.88
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.88
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.88
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.88
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.88
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.88
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.88
KOG0198	313	consensus MEKK and related serine/threonine protei	98.88
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.88
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.88
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.88
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.87
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.87
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.87
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.87
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.87
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.87
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.86
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.86
KOG4721	904	consensus Serine/threonine protein kinase, contain	98.86
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.86
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.86
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.86
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.86
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.85
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.85
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.85
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.85
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.85
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.85
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.85
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.85
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.85
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.84
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.84
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.84
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.84
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.84
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.83
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.83
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.83
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.83
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.83
PLN00009	294	cyclin-dependent kinase A; Provisional	98.83
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.83
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.83
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.83
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.82
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.82
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.82
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.82
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.82
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.81
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.81
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.81
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.81
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.81
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.81
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.8
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.8
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.8
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.8
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.8
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.79
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.79
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.79
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.78
PTZ00283	496	serine/threonine protein kinase; Provisional	98.77
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.77
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.77
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.77
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.77
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.77
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.77
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.76
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.76
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.76
PHA03212	391	serine/threonine kinase US3; Provisional	98.75
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.74
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.73
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.73
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.73
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.73
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.72
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.71
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.71
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.71
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.71
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.71
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.7
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.69
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.67
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.67
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.66
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.66
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.65
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.65
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.65
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.64
PTZ00036	440	glycogen synthase kinase; Provisional	98.64
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.64
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.63
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.63
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.63
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.63
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.63
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.63
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.62
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.62
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.62
PHA03209	357	serine/threonine kinase US3; Provisional	98.61
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.6
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.6
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.6
KOG3653	534	consensus Transforming growth factor beta/activin	98.59
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.59
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.58
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.58
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.58
PHA03211	461	serine/threonine kinase US3; Provisional	98.57
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.57
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.57
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.56
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.55
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.55
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.54
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.54
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.54
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.54
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.52
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.51
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.51
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.5
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.49
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.49
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.48
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.48
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.48
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.47
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.46
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.46
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.45
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.44
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.44
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.43
KOG0584	632	consensus Serine/threonine protein kinase [General	98.43
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.41
PHA03207	392	serine/threonine kinase US3; Provisional	98.41
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.41
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.39
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.36
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.36
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.34
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.34
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.33
PRK14879	211	serine/threonine protein kinase; Provisional	98.28
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.28
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.25
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.25
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.25
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.21
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.2
PRK10345	210	hypothetical protein; Provisional	98.2
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.2
PHA03210	501	serine/threonine kinase US3; Provisional	98.18
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.17
KOG1152	772	consensus Signal transduction serine/threonine kin	98.16
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.13
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.13
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.12
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.09
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.08
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.07
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.06
PTZ00284	467	protein kinase; Provisional	98.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	97.95
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.93
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.92
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.87
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.85
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.79
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.76
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.73
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.7
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	97.64
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.59
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.57
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.46
smart00090	237	RIO RIO-like kinase.	97.43
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.3
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.29
PRK12274	218	serine/threonine protein kinase; Provisional	97.02
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.01
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.01
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.74
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.7
PHA02882	294	putative serine/threonine kinase; Provisional	96.69
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.66
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.59
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	96.52
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	96.44
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	96.37
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.36
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	96.33
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	96.23
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.04
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	95.82
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	95.77
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	95.46
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	95.2
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	95.03
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	95.01
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	94.91
KOG1243	690	consensus Protein kinase [General function predict	94.76
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	94.43
PRK10593	297	hypothetical protein; Provisional	92.21
KOG3087	229	consensus Serine/threonine protein kinase [General	91.91
PLN02876	822	acyl-CoA dehydrogenase	91.74
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	90.38
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	90.18
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	89.41
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	87.89
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	86.25
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	85.3
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	83.99
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	81.69

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=7.1e-18  Score=116.13  Aligned_cols=97  Identities=31%  Similarity=0.539  Sum_probs=86.8

Q ss_pred             CcccccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceee
Q 045247           22 PYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLI  100 (121)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~  100 (121)
                      ....|++.++..+|++|...+.||+|.||  .||+|.. .+..+++|.+....... ..+|.+|+..+.+++|+|+++++
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg--~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~Ll  137 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFG--TVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLL  137 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCe--EEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEE
Confidence            56679999999999999999999999999  9999999 66889999887664221 56699999999999999999999


Q ss_pred             eEEecCC-ccEEEEeccCCCCC
Q 045247          101 GCCLETP-IPILVFEYGEYRTL  121 (121)
Q Consensus       101 ~~~~~~~-~~~lv~e~~~~g~L  121 (121)
                      |+|.... ...|||||+++|+|
T Consensus       138 GyC~e~~~~~~LVYEym~nGsL  159 (361)
T KOG1187|consen  138 GYCLEGGEHRLLVYEYMPNGSL  159 (361)
T ss_pred             EEEecCCceEEEEEEccCCCCH
Confidence            9999888 49999999999986

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.59  E-value=7.4e-15  Score=100.26  Aligned_cols=86  Identities=19%  Similarity=0.328  Sum_probs=75.4

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ...+|.....||.|.|+  .||+|..  .+..+++|.+.... ..+....+..|+.+|+.++|+|++.+++++..++.++
T Consensus         8 ~~~~y~~~~~iG~Gsfa--vVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~   85 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFA--VVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY   85 (429)
T ss_pred             ccccceehhhccCcceE--EEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence            34578888889999999  9999998  67889999998663 2344667889999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      |||||+.+|+|
T Consensus        86 lVMEyC~gGDL   96 (429)
T KOG0595|consen   86 LVMEYCNGGDL   96 (429)
T ss_pred             EEEEeCCCCCH
Confidence            99999999986

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.56  E-value=2.1e-15  Score=105.24  Aligned_cols=115  Identities=16%  Similarity=0.215  Sum_probs=89.6

Q ss_pred             cCchHHHHHHHHhhcC---CCCCcccccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHH
Q 045247            3 RNGATVLKELIASSHG---KYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVY   78 (121)
Q Consensus         3 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~   78 (121)
                      .+..+++..+..++..   ..+....+..+.++.....+...+.||+|.||  .||.|.| ....+++|.+....  ...
T Consensus       170 ~~~~gl~~~l~~p~~~~~~~~p~~~~~~~d~wei~r~~l~l~~~LG~G~FG--~V~~g~~~~~~~vavk~ik~~~--m~~  245 (468)
T KOG0197|consen  170 KNADGLCTRLRDPCSKQGHTKPQTPDLARDPWEIPREELKLIRELGSGQFG--EVWLGKWNGSTKVAVKTIKEGS--MSP  245 (468)
T ss_pred             ccCcchhhcccCchhccCCCCCCCCccccCCeeecHHHHHHHHHhcCCccc--eEEEEEEcCCCcccceEEeccc--cCh
Confidence            3445555555555543   22333334456666677777888899999999  9999999 44578999888763  456


Q ss_pred             HHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           79 KYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        79 ~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ..+.+|+.+|++++|+++++++++|.....++||||||+.|+|
T Consensus       246 ~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL  288 (468)
T KOG0197|consen  246 EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL  288 (468)
T ss_pred             hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence            7888999999999999999999999998899999999999976

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.40  E-value=2e-13  Score=100.00  Aligned_cols=91  Identities=24%  Similarity=0.347  Sum_probs=78.4

Q ss_pred             HHHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeee
Q 045247           29 KELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIG  101 (121)
Q Consensus        29 ~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~  101 (121)
                      ...+..+.+....+.||+|.||  .||++..       ....|+||.++..........|.+|+.+++.++|+||++++|
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFG--kVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlG  556 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFG--KVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLG  556 (774)
T ss_pred             ceeEechhheeehhhhcCchhh--hhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence            3344566778889999999999  9999976       134689999987764446789999999999999999999999


Q ss_pred             EEecCCccEEEEeccCCCCC
Q 045247          102 CCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       102 ~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +|...+..++|+|||..|+|
T Consensus       557 VC~~~~P~~MvFEYm~~GDL  576 (774)
T KOG1026|consen  557 VCREGDPLCMVFEYMDHGDL  576 (774)
T ss_pred             EEccCCeeEEEEEecccccH
Confidence            99999999999999999986

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.40  E-value=2.1e-12  Score=89.07  Aligned_cols=83  Identities=23%  Similarity=0.350  Sum_probs=69.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEeCCeE-EEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC-ccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFWQERL-ISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP-IPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~~~~~-~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~-~~~lv~  113 (121)
                      .+...+.+|.|.||  .||++.|.|.. +++|.+.... .......+.+|+.++.+++|||+++++|.+..+. ...+||
T Consensus        42 ~l~~~~~iG~G~~g--~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt  119 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFG--TVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT  119 (362)
T ss_pred             HhhhhhhcccCCce--eEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence            34445669999999  99999996666 9999987653 1222568999999999999999999999998877 789999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       120 Ey~~~GsL  127 (362)
T KOG0192|consen  120 EYMPGGSL  127 (362)
T ss_pred             EeCCCCcH
Confidence            99999986

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.38  E-value=2.9e-12  Score=90.49  Aligned_cols=94  Identities=16%  Similarity=0.258  Sum_probs=77.4

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--C-C--eE-EEEEEecCC--CChhHHHHHHHHHHHHHhcCCCCcc
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFW--Q-E--RL-ISVLKFDES--LPDSVYKYSINNIVYAAQMDHKHIL   97 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~-~--~~-~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~~~   97 (121)
                      +.-..|....++....++||+|.||  .||+|.+  . +  .. +++|.....  ........+.+|.++++.++|+|++
T Consensus       147 I~r~~Wel~H~~v~l~kkLGeGaFG--eV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVV  224 (474)
T KOG0194|consen  147 IPRQKWELSHSDIELGKKLGEGAFG--EVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVV  224 (474)
T ss_pred             ccccccEEeccCccccceeeccccc--EEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEE
Confidence            3445566666777778999999999  9999998  2 2  23 788887752  2244578899999999999999999


Q ss_pred             eeeeEEecCCccEEEEeccCCCCC
Q 045247           98 KLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        98 ~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +++|++....++++|||++.||+|
T Consensus       225 r~yGVa~~~~Pl~ivmEl~~gGsL  248 (474)
T KOG0194|consen  225 RFYGVAVLEEPLMLVMELCNGGSL  248 (474)
T ss_pred             EEEEEEcCCCccEEEEEecCCCcH
Confidence            999999999999999999999986

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.37  E-value=7.5e-13  Score=94.50  Aligned_cols=87  Identities=16%  Similarity=0.214  Sum_probs=76.5

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .++..+...++||+|.||  .|..|.. .+..+++|.++..........|.+|+..|.+++|||++.++|+|..++...+
T Consensus       535 fPRs~L~~~ekiGeGqFG--EVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm  612 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFG--EVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM  612 (807)
T ss_pred             cchhheehhhhhcCcccc--eeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence            345567778999999999  9999998 5688999999987633345889999999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||+++|+|
T Consensus       613 I~EYmEnGDL  622 (807)
T KOG1094|consen  613 ITEYMENGDL  622 (807)
T ss_pred             HHHHHhcCcH
Confidence            9999999975

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=3.4e-12  Score=87.74  Aligned_cols=84  Identities=14%  Similarity=0.157  Sum_probs=71.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-h-h----HHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-D-S----VYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~-~----~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      +.|...+.+|+|.||  .|..+..  ++..+++|.+..... . +    ....+.+|+.+|++++||+++++.+++..++
T Consensus       172 d~yii~~~LGsGafg--~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFG--LVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             ceeEeeeeecCCcee--EEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            456778999999999  9999988  789999999875430 1 1    1234679999999999999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..|+||||++||+|
T Consensus       250 s~YmVlE~v~GGeL  263 (475)
T KOG0615|consen  250 SSYMVLEYVEGGEL  263 (475)
T ss_pred             ceEEEEEEecCccH
Confidence            99999999999986

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.35  E-value=1.1e-12  Score=95.99  Aligned_cols=84  Identities=17%  Similarity=0.259  Sum_probs=75.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CC---eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QE---RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~---~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      +.....++||.|.||  .|++|.+  .+   ..+++|.++...+.+....|+.|..+|.+.+|||++++-|+.......+
T Consensus       629 s~i~Ie~VIGaGEFG--EVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvM  706 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFG--EVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVM  706 (996)
T ss_pred             hheEEEEEEeccccc--ceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeE
Confidence            345668999999999  9999998  33   5699999999887788899999999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +|.|||++|+|
T Consensus       707 IiTEyMENGsL  717 (996)
T KOG0196|consen  707 IITEYMENGSL  717 (996)
T ss_pred             EEhhhhhCCcH
Confidence            99999999986

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.34  E-value=7.8e-13  Score=95.43  Aligned_cols=91  Identities=16%  Similarity=0.379  Sum_probs=83.1

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           27 SAKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      .++.|+-.+.++.-..+||.|.||  .||.|.|  ....+++|.++...  ....+|+.|.++|+.+.|||+++++|+|.
T Consensus       258 n~DkWEmeRtdItMkhKLGGGQYG--eVYeGvWKkyslTvAVKtLKEDt--MeveEFLkEAAvMKeikHpNLVqLLGVCT  333 (1157)
T KOG4278|consen  258 NADKWEMERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCT  333 (1157)
T ss_pred             CcchhhccchheeeeeccCCCccc--ceeeeeeeccceeeehhhhhhcc--hhHHHHHHHHHHHHhhcCccHHHHhhhhc
Confidence            357888888888889999999999  9999999  77889999998773  67899999999999999999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....|+|.|||.+|+|
T Consensus       334 ~EpPFYIiTEfM~yGNL  350 (1157)
T KOG4278|consen  334 HEPPFYIITEFMCYGNL  350 (1157)
T ss_pred             cCCCeEEEEecccCccH
Confidence            99999999999999975

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.32  E-value=7.7e-12  Score=88.13  Aligned_cols=87  Identities=13%  Similarity=0.104  Sum_probs=75.5

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ...++|..+.+||+|.||  .||.+.-  +|...|+|.++....  ..+...+..|-.+|...+++++++++-.+.+.+.
T Consensus       138 ~~~~DFe~Lk~IgkGAfG--eVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~  215 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFG--EVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEY  215 (550)
T ss_pred             CCcccchhheeeccccce--eEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCe
Confidence            355789999999999999  9999987  889999999987641  2235678888889999899999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      +||||||++||++
T Consensus       216 LYLiMEylPGGD~  228 (550)
T KOG0605|consen  216 LYLIMEYLPGGDM  228 (550)
T ss_pred             eEEEEEecCCccH
Confidence            9999999999974

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.28  E-value=1.7e-11  Score=92.67  Aligned_cols=85  Identities=22%  Similarity=0.411  Sum_probs=73.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe---CC----eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW---QE----RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~---~~----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      ..+......||.|.||  .||.|.+   .+    ..+++|.+.+.....+...|+.|..+|+.++|+|+++++|++....
T Consensus       691 ~~~v~l~~~lG~G~FG--~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFG--EVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             hhheEeeeeecccccc--ceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            3456678899999999  9999998   23    2478888887765566788999999999999999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++++|||++|+|
T Consensus       769 ~~~i~leyM~gGDL  782 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDL  782 (1025)
T ss_pred             CcEEEehhcccCcH
Confidence            99999999999986

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.26  E-value=3.9e-11  Score=84.00  Aligned_cols=90  Identities=17%  Similarity=0.246  Sum_probs=74.1

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe--C-----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeee
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW--Q-----ERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIG  101 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~  101 (121)
                      .+....+.|...+.||.|.||  .||++..  .     +..+++|.+...........+.+|+..+..+. |||++++++
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~  108 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFG--KVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLG  108 (400)
T ss_pred             ceeccccceehhheecCCCCc--eEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence            444556788899999999999  9999986  1     23589998875432334567889999999996 999999999


Q ss_pred             EEecCCccEEEEeccCCCCC
Q 045247          102 CCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       102 ~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++......++||||+++|+|
T Consensus       109 ~~~~~~~~~lv~Ey~~~g~L  128 (400)
T cd05105         109 ACTKSGPIYIITEYCFYGDL  128 (400)
T ss_pred             EEccCCceEEEEEecCCCcH
Confidence            99998999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.26  E-value=1.1e-11  Score=87.01  Aligned_cols=81  Identities=21%  Similarity=0.284  Sum_probs=68.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--CccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLET--PIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~~~  110 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.++.... ........+|+.+|++++|+|++++.+.....  ..+|
T Consensus       117 ~~feki~kIGeGTyg--~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYG--QVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             HHHHHHHHhcCcchh--heeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            456778899999999  9999998  888999999886541 12245568899999999999999999988765  6899


Q ss_pred             EEEeccCC
Q 045247          111 LVFEYGEY  118 (121)
Q Consensus       111 lv~e~~~~  118 (121)
                      +|+|||++
T Consensus       195 lVFeYMdh  202 (560)
T KOG0600|consen  195 LVFEYMDH  202 (560)
T ss_pred             EEEecccc
Confidence            99999985

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.25  E-value=3.1e-11  Score=83.72  Aligned_cols=89  Identities=17%  Similarity=0.224  Sum_probs=72.9

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeE
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGC  102 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~  102 (121)
                      +....++|...+.||+|.||  .||++.+       .+..+++|.+...........+.+|+.++..+ +|+|++++++.
T Consensus        30 ~~~~~~~~~~~~~LG~G~fG--~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~  107 (375)
T cd05104          30 WEFPRNRLSFGKTLGAGAFG--KVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGA  107 (375)
T ss_pred             cccchHHeehhheecCCccc--eEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence            34445678889999999999  9999864       24578999887543233456788899999999 79999999999


Q ss_pred             EecCCccEEEEeccCCCCC
Q 045247          103 CLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~~~~~~lv~e~~~~g~L  121 (121)
                      +......++||||+++|+|
T Consensus       108 ~~~~~~~~lv~E~~~~g~L  126 (375)
T cd05104         108 CTVGGPTLVITEYCCYGDL  126 (375)
T ss_pred             eccCCcceeeehhccCCcH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.24  E-value=8.6e-11  Score=77.67  Aligned_cols=84  Identities=18%  Similarity=0.265  Sum_probs=70.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .+|...+.||+|.||  .||++.+     .+..+++|.++..........+..++..+..++|+|++++.+.+...+..+
T Consensus         5 ~~~~~~~~ig~G~fg--~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   82 (266)
T cd05064           5 KSIKIERILGTGRFG--ELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM   82 (266)
T ss_pred             HHeEEeeeecccCCC--eEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence            457788899999999  9999976     245788998876542334567888999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        83 lv~e~~~~~~L   93 (266)
T cd05064          83 IVTEYMSNGAL   93 (266)
T ss_pred             EEEEeCCCCcH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.24  E-value=4.5e-11  Score=85.28  Aligned_cols=84  Identities=14%  Similarity=0.203  Sum_probs=74.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ..|.....||+|.|+  .+|.+..  +|..+|+|.++....  ......+.+|+.+.+.|.|||++++++++.+.+.+|+
T Consensus        18 ~~Y~~g~~LGkGgFA--~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFA--RCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             ceeeeeeeeccCcce--EEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE
Confidence            358889999999999  9999998  788999999987431  2345778899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      |.|++++|+|
T Consensus        96 vLELC~~~sL  105 (592)
T KOG0575|consen   96 VLELCHRGSL  105 (592)
T ss_pred             EEEecCCccH
Confidence            9999999875

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.23  E-value=1.3e-10  Score=79.31  Aligned_cols=84  Identities=7%  Similarity=0.055  Sum_probs=72.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.|+  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++++......+++|
T Consensus         5 ~~y~~~~~lg~g~~g--~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           5 DDFEKISELGAGNGG--VVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             hhhheeccccCCCCE--EEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            578888999999999  9999988  677788888775432333567889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        83 e~~~~~~L   90 (333)
T cd06650          83 EHMDGGSL   90 (333)
T ss_pred             ecCCCCcH
Confidence            99999875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.22  E-value=1.3e-10  Score=79.26  Aligned_cols=84  Identities=7%  Similarity=0.025  Sum_probs=72.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.+|  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++++...+..++||
T Consensus         5 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (331)
T cd06649           5 DDFERISELGAGNGG--VVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (331)
T ss_pred             ccceEEEeecCCCCE--EEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence            578888999999999  9999988  677888998876532334567889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        83 e~~~~~~L   90 (331)
T cd06649          83 EHMDGGSL   90 (331)
T ss_pred             ecCCCCcH
Confidence            99999875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.21  E-value=9.7e-11  Score=81.34  Aligned_cols=83  Identities=10%  Similarity=0.027  Sum_probs=70.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .|...+.||+|.||  .||++..  ++..+++|.+....  .......+..|+.++..++|++++++++.+...+..++|
T Consensus         2 ~f~~~~~LG~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv   79 (381)
T cd05626           2 MFVKIKTLGIGAFG--EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV   79 (381)
T ss_pred             CceEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEE
Confidence            57778899999999  9999988  67889999987532  112345688899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~E~~~gg~L   88 (381)
T cd05626          80 MDYIPGGDM   88 (381)
T ss_pred             EecCCCCcH
Confidence            999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.21  E-value=3.6e-11  Score=81.41  Aligned_cols=86  Identities=15%  Similarity=0.183  Sum_probs=74.4

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ..++|...++||+|+||  .|+...-  +++..++|.++...  ...+......|..++..++||.+++++-.+.+...+
T Consensus        23 ~~~dF~~lkviGkG~fG--kV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL  100 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFG--KVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL  100 (357)
T ss_pred             ChhheeeeeeeeccCCc--eEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence            34579999999999999  9998887  78889999988653  123356678888999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      |+|+||+.||+|
T Consensus       101 ylVld~~~GGeL  112 (357)
T KOG0598|consen  101 YLVLDYLNGGEL  112 (357)
T ss_pred             EEEEeccCCccH
Confidence            999999999986

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=7e-11  Score=81.39  Aligned_cols=84  Identities=14%  Similarity=0.107  Sum_probs=71.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||.|.||  .||++..  .+..+++|.+....  .......+..|+.++..++|+|++++++.+......++
T Consensus         1 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l   78 (364)
T cd05599           1 DDFESIKVIGRGAFG--EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYL   78 (364)
T ss_pred             CCceEEEEEEecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEE
Confidence            367888999999999  9999988  67889999987532  11234567789999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        79 v~E~~~~g~L   88 (364)
T cd05599          79 IMEYLPGGDM   88 (364)
T ss_pred             EECCCCCcHH
Confidence            9999998865

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=1.2e-10  Score=80.64  Aligned_cols=83  Identities=12%  Similarity=0.055  Sum_probs=70.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||.|.||  .||++..  .+..+++|.+....  .......+..|+.++..++|+|++++++.+......++|
T Consensus         2 ~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv   79 (377)
T cd05629           2 DFHTVKVIGKGAFG--EVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI   79 (377)
T ss_pred             CceEeEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence            67888999999999  9999988  67889999886432  112245677889999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~E~~~gg~L   88 (377)
T cd05629          80 MEFLPGGDL   88 (377)
T ss_pred             EeCCCCCcH
Confidence            999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.20  E-value=1.5e-10  Score=79.63  Aligned_cols=83  Identities=14%  Similarity=0.112  Sum_probs=70.8

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||.|.||  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++++......+++||
T Consensus        75 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  152 (353)
T PLN00034         75 ELERVNRIGSGAGG--TVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE  152 (353)
T ss_pred             HHhhhhhccCCCCe--EEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence            46667889999999  9999988  6788999998654323335678899999999999999999999998899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus       153 ~~~~~~L  159 (353)
T PLN00034        153 FMDGGSL  159 (353)
T ss_pred             cCCCCcc
Confidence            9999875

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.19  E-value=3.3e-10  Score=76.18  Aligned_cols=84  Identities=14%  Similarity=0.217  Sum_probs=69.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe------------------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW------------------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHIL   97 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~------------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~   97 (121)
                      +.|...+.||+|.||  .||.+.+                  .+..+++|.+...........+.+|+..+..++|+|++
T Consensus         5 ~~~~~~~~lg~G~fg--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           5 GHLLFKEKLGEGQFG--EVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             hhCeeeeEecccCCe--EEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCee
Confidence            467888999999999  9999874                  12358899887653233356788999999999999999


Q ss_pred             eeeeEEecCCccEEEEeccCCCCC
Q 045247           98 KLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        98 ~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++++++...+..+++|||+++|+|
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L  106 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDL  106 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcH
Confidence            999999988899999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.18  E-value=1.2e-11  Score=82.46  Aligned_cols=80  Identities=24%  Similarity=0.326  Sum_probs=69.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .|.....+|+|++|  .|++|..  +|+.+++|.+-.+.+. ...+-.++|++.|+++.|+|++.++.+|.....+++|+
T Consensus         3 kYE~LgkvGEGSYG--vV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF   80 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYG--VVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF   80 (396)
T ss_pred             HHhhhhccccCcce--EEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence            35566789999999  9999998  8999999998766532 33566789999999999999999999999999999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+..
T Consensus        81 E~~dh   85 (396)
T KOG0593|consen   81 EYCDH   85 (396)
T ss_pred             eecch
Confidence            99864

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.18  E-value=3.1e-10  Score=76.62  Aligned_cols=83  Identities=7%  Similarity=0.035  Sum_probs=70.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||+|.|+  .||++..  ++..+++|.+...........+..|+..+..++|+|++++++++......+++||
T Consensus         2 ~~~~~~~lg~G~~g--~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (308)
T cd06615           2 DFEKLGELGAGNGG--VVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME   79 (308)
T ss_pred             CceEEeeccCCCCe--EEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence            57888899999999  9999988  6777888887654322334668889999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 y~~~~~L   86 (308)
T cd06615          80 HMDGGSL   86 (308)
T ss_pred             ccCCCcH
Confidence            9998875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.18  E-value=1.7e-10  Score=79.93  Aligned_cols=83  Identities=11%  Similarity=0.003  Sum_probs=70.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.||  .||++..  .+..+++|.+....  .......+..|+.++..++|++++++++.+...+..++|
T Consensus         2 ~y~~~~~lG~G~~g--~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv   79 (376)
T cd05598           2 MFVKIKTIGIGAFG--EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV   79 (376)
T ss_pred             CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence            67888999999999  9999988  67889999886432  012245677889999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~E~~~~g~L   88 (376)
T cd05598          80 MDYIPGGDM   88 (376)
T ss_pred             EeCCCCCcH
Confidence            999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.18  E-value=1.8e-10  Score=79.98  Aligned_cols=83  Identities=8%  Similarity=0.013  Sum_probs=70.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .|...+.||+|.||  .||++..  .+..+++|.+....  .......+..|+.++..++|++++++++.+......++|
T Consensus         2 ~f~~~~~LG~G~~g--~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv   79 (382)
T cd05625           2 MFVKIKTLGIGAFG--EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV   79 (382)
T ss_pred             CcEEEEEEEeCCCE--EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEE
Confidence            47778899999999  9999988  67789999886532  112345678899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~E~~~gg~L   88 (382)
T cd05625          80 MDYIPGGDM   88 (382)
T ss_pred             EeCCCCCcH
Confidence            999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=1.6e-10  Score=78.83  Aligned_cols=83  Identities=10%  Similarity=0.124  Sum_probs=70.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.||  .||++..  .+..+++|.+.....  ......+..++..+..++|+|++++++.+......++|
T Consensus         2 ~y~~~~~ig~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   79 (333)
T cd05600           2 DFQILTQVGQGGYG--QVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA   79 (333)
T ss_pred             CcEEEEEEeecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence            57888999999999  9999998  678899999875321  12345678889999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~e~~~g~~L   88 (333)
T cd05600          80 MEYVPGGDF   88 (333)
T ss_pred             EeCCCCCCH
Confidence            999999875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.17  E-value=5.8e-11  Score=77.89  Aligned_cols=80  Identities=19%  Similarity=0.299  Sum_probs=69.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .|...+.+|+|.|+  .||++..  +++.+++|.+..... ....-..++|+..|+.++|+|++.+++++...+.+.+|+
T Consensus         3 rY~~~~~lGEG~~g--vVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf   80 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYG--VVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF   80 (318)
T ss_pred             hhhhhhhhcCcceE--EEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence            35667889999999  9999999  889999999987641 122566789999999999999999999999999999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||++.
T Consensus        81 Efm~t   85 (318)
T KOG0659|consen   81 EFMPT   85 (318)
T ss_pred             Eeccc
Confidence            99974

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.17  E-value=1.4e-10  Score=79.10  Aligned_cols=84  Identities=7%  Similarity=0.085  Sum_probs=71.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.|+  .||++..  .+..+++|.+....  .......+..|+..+..++|+|++++++.+...+..++
T Consensus        18 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   95 (329)
T PTZ00263         18 SDFEMGETLGTGSFG--RVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF   95 (329)
T ss_pred             hheEEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence            468888999999999  9999998  67889999886432  11234567889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++|+|
T Consensus        96 v~e~~~~~~L  105 (329)
T PTZ00263         96 LLEFVVGGEL  105 (329)
T ss_pred             EEcCCCCChH
Confidence            9999999875

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.17  E-value=2.4e-10  Score=77.61  Aligned_cols=83  Identities=11%  Similarity=0.099  Sum_probs=72.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc-cEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI-PILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~-~~lv~  113 (121)
                      ++.....||+|.-|  .|+++..  ++..+++|.+.........+.+.+|+.++....||+++.++++|..... ..++|
T Consensus        80 dle~~~~lG~G~gG--~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m  157 (364)
T KOG0581|consen   80 DLERLGVLGSGNGG--TVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM  157 (364)
T ss_pred             HhhhhhhcccCCCc--EEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence            45567889999999  9999988  7888999999655434456889999999999999999999999998884 99999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      |||.+|+|
T Consensus       158 EYMDgGSL  165 (364)
T KOG0581|consen  158 EYMDGGSL  165 (364)
T ss_pred             hhcCCCCH
Confidence            99999986

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.17  E-value=1.4e-10  Score=81.29  Aligned_cols=90  Identities=16%  Similarity=0.251  Sum_probs=73.8

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeee
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIG  101 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~  101 (121)
                      ++....++|...+.||+|.||  .||++.+       .+..+++|.+...........+..|+.++..+. |+|++++++
T Consensus        31 ~~~~~~~~~~~~~~lG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~  108 (401)
T cd05107          31 AWEMPRDNLVLGRTLGSGAFG--RVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLG  108 (401)
T ss_pred             cceecHHHeehhhhccCCCce--eEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence            345556678888999999999  9999985       235689999976532233457888999999997 999999999


Q ss_pred             EEecCCccEEEEeccCCCCC
Q 045247          102 CCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       102 ~~~~~~~~~lv~e~~~~g~L  121 (121)
                      .+......++|+||+++|+|
T Consensus       109 ~~~~~~~~~iv~E~~~~g~L  128 (401)
T cd05107         109 ACTKGGPIYIITEYCRYGDL  128 (401)
T ss_pred             EEccCCCcEEEEeccCCCcH
Confidence            99888899999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.16  E-value=3.8e-10  Score=74.48  Aligned_cols=87  Identities=16%  Similarity=0.158  Sum_probs=73.3

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      +.+++++.....||+|.|+  .||++..  .+..+++|.+.... ......+.+++..+..++|+|++++++.+...+..
T Consensus         4 ~~~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   80 (268)
T cd06624           4 EYEYDENGERVVLGKGTYG--IVYAARDLSTQVRIAIKEIPERD-SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF   80 (268)
T ss_pred             ccccccCCceEEEecCCce--EEEEeEecCCCcEEEEEEecCCC-HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence            3456677777899999999  9999987  56778999887653 33456788899999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+++++|
T Consensus        81 ~lv~e~~~~~~L   92 (268)
T cd06624          81 KIFMEQVPGGSL   92 (268)
T ss_pred             EEEEecCCCCCH
Confidence            999999998875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.15  E-value=7.4e-10  Score=73.67  Aligned_cols=83  Identities=13%  Similarity=0.190  Sum_probs=70.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||+|.++  .||++..  .+..+++|.+...........+..++..+..++|+|++++++.+...+..+++||
T Consensus         2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (279)
T cd06619           2 DIQYQEILGHGNGG--TVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE   79 (279)
T ss_pred             cchheeeeccCCCe--EEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence            46677889999999  9999987  6788999988654323345678889999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~l   86 (279)
T cd06619          80 FMDGGSL   86 (279)
T ss_pred             cCCCCCh
Confidence            9998864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.15  E-value=1.7e-11  Score=79.21  Aligned_cols=84  Identities=17%  Similarity=0.220  Sum_probs=71.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.+|.|.||  .||.+..  ....+++|++.....  ....+.+.+|+.+.+.++|||+.++++.+.+....||
T Consensus        22 ~dfeigr~LgkgkFG--~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFG--NVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             hhccccccccCCccc--cEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            478889999999999  9999998  566789999876531  1124678889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||.++|++
T Consensus       100 ilEya~~gel  109 (281)
T KOG0580|consen  100 ILEYAPRGEL  109 (281)
T ss_pred             EEEecCCchH
Confidence            9999999874

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.14  E-value=1.6e-10  Score=78.79  Aligned_cols=87  Identities=16%  Similarity=0.286  Sum_probs=69.0

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEe
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCL  104 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~  104 (121)
                      .+.++|...+.||+|.||  .||++..       .+..+++|.+...........+..|+..+..+ +|+|++++++.+.
T Consensus         4 ~~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFG--KVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             cchhHceeeeEeccCCcc--eEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            345678889999999999  9999964       23568999887543233456788899999998 7999999999876


Q ss_pred             cC-CccEEEEeccCCCCC
Q 045247          105 ET-PIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~-~~~~lv~e~~~~g~L  121 (121)
                      .. ...+++|||+++|+|
T Consensus        82 ~~~~~~~lv~ey~~~g~L   99 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNL   99 (338)
T ss_pred             CCCCceEEEEecCCCCcH
Confidence            54 457899999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.14  E-value=3e-10  Score=78.43  Aligned_cols=83  Identities=8%  Similarity=0.009  Sum_probs=69.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.||  .||.+..  .+..+++|.++....  ......+..+..++..++|++++++++.+......++|
T Consensus         2 ~y~~~~~LG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv   79 (363)
T cd05628           2 DFESLKVIGRGAFG--EVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI   79 (363)
T ss_pred             CceEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence            67888999999999  9999988  678899999875320  12235677888899999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~E~~~gg~L   88 (363)
T cd05628          80 MEFLPGGDM   88 (363)
T ss_pred             EcCCCCCcH
Confidence            999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=1.4e-10  Score=77.76  Aligned_cols=83  Identities=11%  Similarity=0.028  Sum_probs=69.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.|+  .||++..  .+..+++|.+....  .......+.+|+..++.++|+|++++++.+......+++
T Consensus         2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   79 (291)
T cd05612           2 DLERIKTVGTGTFG--RVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML   79 (291)
T ss_pred             CceeeeeeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence            57788999999999  9999998  67889999886432  112345678899999999999999999999888999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~e~~~~~~L   88 (291)
T cd05612          80 MEYVPGGEL   88 (291)
T ss_pred             EeCCCCCCH
Confidence            999998875

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.14  E-value=6.9e-10  Score=72.59  Aligned_cols=78  Identities=22%  Similarity=0.341  Sum_probs=66.4

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCC
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      +.||+|.|+  .||++..  .+..+++|.+...........+.+++..++.++|+|++++.+.+......++||||++++
T Consensus         1 ~~lg~g~~g--~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFG--EVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCc--cEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            368999999  9999988  678899998765433344567889999999999999999999999989999999999988


Q ss_pred             CC
Q 045247          120 TL  121 (121)
Q Consensus       120 ~L  121 (121)
                      +|
T Consensus        79 ~L   80 (252)
T cd05084          79 DF   80 (252)
T ss_pred             cH
Confidence            64

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.14  E-value=4e-10  Score=77.34  Aligned_cols=84  Identities=11%  Similarity=0.169  Sum_probs=69.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--C-CeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--Q-ERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~-~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|.||  .||++.+  . +..+++|.+....  .......+..|+..+..++|||++++++.+......+
T Consensus        30 ~~y~~~~~ig~G~~g--~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         30 EDFNFIRTLGTGSFG--RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             hhcEEEEEEeecCCe--EEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            468888999999999  9999987  3 3578999886431  1123456788999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus       108 lv~Ey~~~g~L  118 (340)
T PTZ00426        108 LVLEFVIGGEF  118 (340)
T ss_pred             EEEeCCCCCcH
Confidence            99999999875

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=2.6e-10  Score=75.70  Aligned_cols=85  Identities=12%  Similarity=0.112  Sum_probs=72.5

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      +.++|...+.||.|.++  .||++..  .+..+++|.+.... ......+..++..++.++|+|++++++.+......++
T Consensus         3 ~~~~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (280)
T cd06611           3 PNDIWEIIGELGDGAFG--KVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWI   79 (280)
T ss_pred             chhHHHHHHHhcCCCCc--eEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Confidence            34568888899999999  9999988  57789999887553 3445678889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++++|
T Consensus        80 v~e~~~~~~L   89 (280)
T cd06611          80 LIEFCDGGAL   89 (280)
T ss_pred             EeeccCCCcH
Confidence            9999998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.13  E-value=8.4e-10  Score=72.79  Aligned_cols=84  Identities=19%  Similarity=0.251  Sum_probs=70.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--C---CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--Q---ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~---~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|.|+  .||++.+  .   ...+++|.++..........+..++..+..++|+|++++.+.+......+
T Consensus         4 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (266)
T cd05033           4 SYVTIEKVIGGGEFG--EVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM   81 (266)
T ss_pred             HHceeeeEecCCccc--eEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence            468888999999999  9999987  2   24688888875543344567888999999999999999999998889999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++|||+++++|
T Consensus        82 iv~e~~~~~~L   92 (266)
T cd05033          82 IITEYMENGSL   92 (266)
T ss_pred             EEEEcCCCCCH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.13  E-value=2.7e-11  Score=83.90  Aligned_cols=86  Identities=14%  Similarity=0.223  Sum_probs=73.7

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ....|...+.+|.|.||  .|-++..  .|+.+++|.++...  +..+.-++.+|+.+|+.++||||+.++.++.+.+..
T Consensus        51 lkHRyE~~etLGkGTYG--KVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI  128 (668)
T KOG0611|consen   51 LKHRYEITETLGKGTYG--KVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI  128 (668)
T ss_pred             hhhHHHHHHHhcCCccc--ceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence            34567788999999999  9988877  68889999998654  223345688999999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      .+||||..+|+|
T Consensus       129 vivMEYaS~GeL  140 (668)
T KOG0611|consen  129 VIVMEYASGGEL  140 (668)
T ss_pred             EEEEEecCCccH
Confidence            999999999875

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.13  E-value=1e-09  Score=71.61  Aligned_cols=78  Identities=24%  Similarity=0.379  Sum_probs=66.6

Q ss_pred             CeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCCC
Q 045247           42 EVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRT  120 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g~  120 (121)
                      +.||+|.++  .||++.. .+..+++|.+....+......+.+++..+..++|+|++++.+.+......+++|||+++++
T Consensus         1 ~~ig~g~~g--~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   78 (250)
T cd05085           1 ELLGKGNFG--EVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD   78 (250)
T ss_pred             CccCCCCCc--eEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence            368999999  9999988 7778899988765433445578889999999999999999999998899999999999886


Q ss_pred             C
Q 045247          121 L  121 (121)
Q Consensus       121 L  121 (121)
                      |
T Consensus        79 L   79 (250)
T cd05085          79 F   79 (250)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.12  E-value=4.2e-10  Score=74.27  Aligned_cols=80  Identities=26%  Similarity=0.405  Sum_probs=64.7

Q ss_pred             cCCeeecCCCccceEEEEEeC------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           40 EREVIKQCDFYITKLYKGFWQ------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        40 ~~~~ig~g~~~~~~v~~~~~~------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..+.||.|.||  .|+++.+.      +..+++|.+...........+.+++..+..++|+|++++++++......++|+
T Consensus         3 ~~~~ig~G~fg--~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~   80 (259)
T PF07714_consen    3 LIKQIGEGSFG--KVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM   80 (259)
T ss_dssp             EEEEEEEESSE--EEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred             EeeEEccCCCc--EEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccc
Confidence            34689999999  99999883      46789999965443344788899999999999999999999999888899999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        81 e~~~~g~L   88 (259)
T PF07714_consen   81 EYCPGGSL   88 (259)
T ss_dssp             E--TTEBH
T ss_pred             cccccccc
Confidence            99998764

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=3e-10  Score=79.06  Aligned_cols=88  Identities=11%  Similarity=0.118  Sum_probs=77.0

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ......|...++||.|.-+  .||.+..  .+..+++|++...........+.+|+..++.++|||+++.+.+|.....+
T Consensus        22 p~n~~~YeL~e~IG~G~sa--~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~L   99 (516)
T KOG0582|consen   22 PLNAKDYELQEVIGVGASA--VVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSEL   99 (516)
T ss_pred             CCCccceeEEEEEecccee--EeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEeccee
Confidence            3445679999999999999  9999988  67889999998765344468899999999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      |+||.||.+|++
T Consensus       100 WvVmpfMa~GS~  111 (516)
T KOG0582|consen  100 WVVMPFMAGGSL  111 (516)
T ss_pred             EEeehhhcCCcH
Confidence            999999999974

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.12  E-value=4.8e-11  Score=85.31  Aligned_cols=81  Identities=19%  Similarity=0.258  Sum_probs=72.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|.+.+.||+|.|+  .||+|..  +...+++|.+.+.. +.++.+.+.+++++++.+.|||++.+++.+.....+++|
T Consensus         2 e~yhv~e~iG~Gsfg--~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV   79 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFG--RVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV   79 (808)
T ss_pred             cchhHHHHhcCCccc--eeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence            367788899999999  9999987  67889999998654 456678899999999999999999999999999999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      .||+.+
T Consensus        80 te~a~g   85 (808)
T KOG0597|consen   80 TEYAVG   85 (808)
T ss_pred             ehhhhh
Confidence            999876

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.12  E-value=1.2e-09  Score=72.50  Aligned_cols=82  Identities=17%  Similarity=0.235  Sum_probs=69.0

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |...+.||.|.|+  .||++..  .+..+++|.+...........+.+++..+..++|+|++++++.+......++||||
T Consensus         6 ~~~~~~ig~G~~~--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           6 FTKLEKIGKGSFG--EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             hhhheeEeecCCe--EEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence            5667789999999  9999987  66789999876543233456788889999999999999999999999999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        84 ~~~~~l   89 (277)
T cd06641          84 LGGGSA   89 (277)
T ss_pred             CCCCcH
Confidence            998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.11  E-value=9.5e-10  Score=72.62  Aligned_cols=84  Identities=18%  Similarity=0.249  Sum_probs=69.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CC---eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QE---RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~---~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .+|...+.||+|.|+  .||++..  .+   ..+++|.+...........+..++..+..++|+|++++.+.+......+
T Consensus         4 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           4 SCIKIEKVIGAGEFG--EVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             HHeEeeeeecccCCC--ceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            467778999999999  9999976  22   3688888765443344567888999999999999999999999889999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++|||+++++|
T Consensus        82 lv~e~~~~~~L   92 (267)
T cd05066          82 IVTEYMENGSL   92 (267)
T ss_pred             EEEEcCCCCCH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.11  E-value=3.1e-10  Score=78.71  Aligned_cols=87  Identities=14%  Similarity=0.116  Sum_probs=71.7

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ...++|...+.||+|.||  .||.+..  .+..+++|.+....  .......+..++.++..++|+|++++.+.+.....
T Consensus        40 ~~~~~y~~~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFG--EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             CCHHHCeEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            344678889999999999  9999988  67789999886421  11224456788889999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus       118 ~~lv~Ey~~gg~L  130 (370)
T cd05621         118 LYMVMEYMPGGDL  130 (370)
T ss_pred             EEEEEcCCCCCcH
Confidence            9999999999875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.11  E-value=6.2e-10  Score=73.02  Aligned_cols=81  Identities=16%  Similarity=0.237  Sum_probs=68.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      +|...+.||+|.|+  .||.+.+ .+..+++|.+....  .....+..|+..+..++|+|++++++.+......+++|||
T Consensus         5 ~~~~~~~lg~G~~~--~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~   80 (256)
T cd05114           5 ELTFMKELGSGQFG--VVHLGKWRAQIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF   80 (256)
T ss_pred             HcEEeeEecCCcCc--eEEEEEeccCceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence            46777889999999  9999988 66678898876542  2345678899999999999999999999988999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++|+|
T Consensus        81 ~~~~~L   86 (256)
T cd05114          81 MENGCL   86 (256)
T ss_pred             CCCCcH
Confidence            998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.11  E-value=4.2e-10  Score=74.96  Aligned_cols=84  Identities=11%  Similarity=0.066  Sum_probs=70.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.++  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++.+......++||
T Consensus         5 ~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           5 EDLETISDLGAGNGG--SVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             HHHHHHHHcCCCCCe--EEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence            356677889999999  9999988  577888888765432233567888999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        83 e~~~~~~L   90 (284)
T cd06620          83 EFMDCGSL   90 (284)
T ss_pred             ecCCCCCH
Confidence            99998864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.11  E-value=7.9e-10  Score=73.86  Aligned_cols=86  Identities=17%  Similarity=0.177  Sum_probs=69.8

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      .+..|...+.||+|.|+  .||++..       .+..+++|.+...........+..++..++.++|++++++++.+...
T Consensus         4 ~~~~~~i~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           4 SREKITLLRELGQGSFG--MVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             cHHHceeeeeecCCCCc--EEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            45578889999999999  9999864       13468888876543223345677888899999999999999999888


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...+++|||+++|+|
T Consensus        82 ~~~~lv~e~~~~g~L   96 (288)
T cd05061          82 QPTLVVMELMAHGDL   96 (288)
T ss_pred             CCcEEEEeCCCCCCH
Confidence            899999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=6.8e-10  Score=74.15  Aligned_cols=82  Identities=10%  Similarity=0.087  Sum_probs=67.8

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      |...+.||+|.||  .||++..  ++..+++|.+......  .....+.+|+.+++.++|++++++.+.+...+..+++|
T Consensus         2 y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05605           2 FRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             ceEEEEEecCCCe--EEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence            5667889999999  9999988  6788999988754211  11244677899999999999999999998889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        80 e~~~~~~L   87 (285)
T cd05605          80 TLMNGGDL   87 (285)
T ss_pred             eccCCCcH
Confidence            99998875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.10  E-value=1.3e-09  Score=71.40  Aligned_cols=83  Identities=17%  Similarity=0.161  Sum_probs=69.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||.|.++  .||.+..  ++..+++|.++..........+..++..+..++|+|++++.+.+......+++||
T Consensus         1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (255)
T cd08219           1 QYNVLRVVGEGSFG--RALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME   78 (255)
T ss_pred             CceEEEEeeccCCe--EEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence            36677899999999  9999988  6788899988654323345677788889999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus        79 ~~~~~~l   85 (255)
T cd08219          79 YCDGGDL   85 (255)
T ss_pred             eCCCCcH
Confidence            9998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.10  E-value=5.6e-10  Score=78.34  Aligned_cols=87  Identities=17%  Similarity=0.175  Sum_probs=71.6

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-------Ch------hHHHHHHHHHHHHHhcCCCCcc
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-------PD------SVYKYSINNIVYAAQMDHKHIL   97 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-------~~------~~~~~~~~~~~~l~~l~h~~~~   97 (121)
                      ...++|.....||.|.||  .|..+..  .+..+++|++.+..       +.      .....+.+|+.+|++++|+|++
T Consensus        94 k~lNqy~l~~eiG~G~yG--kVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV  171 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYG--KVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV  171 (576)
T ss_pred             eehhheehhhhhcCCccc--eEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence            455789999999999999  9999988  78899999987532       00      0124788999999999999999


Q ss_pred             eeeeEEecC--CccEEEEeccCCCCC
Q 045247           98 KLIGCCLET--PIPILVFEYGEYRTL  121 (121)
Q Consensus        98 ~~~~~~~~~--~~~~lv~e~~~~g~L  121 (121)
                      +++.+..++  +.+|+|+||+..|.+
T Consensus       172 ~LiEvLDDP~s~~~YlVley~s~G~v  197 (576)
T KOG0585|consen  172 KLIEVLDDPESDKLYLVLEYCSKGEV  197 (576)
T ss_pred             EEEEeecCcccCceEEEEEeccCCcc
Confidence            999998654  679999999998864

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.10  E-value=5.3e-10  Score=73.50  Aligned_cols=82  Identities=10%  Similarity=0.202  Sum_probs=70.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      ++|...+.||+|.++  .||++.. .+..+++|.+....  .....+..++..++.++|+|++++.+.+......+++||
T Consensus         6 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05072           6 ESIKLVKKLGAGQFG--EVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE   81 (261)
T ss_pred             HHeEEeeecCCcCCc--eEEEEEecCCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence            468888999999999  9999988 66778898876542  345678889999999999999999999988899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus        82 ~~~~~~L   88 (261)
T cd05072          82 YMAKGSL   88 (261)
T ss_pred             cCCCCcH
Confidence            9998875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.10  E-value=1.3e-09  Score=71.88  Aligned_cols=84  Identities=15%  Similarity=0.200  Sum_probs=70.7

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ..+|...+.||+|.|+  .||++..  .+..+++|.+.... ......+.+++..+..++|++++++.+.+......++|
T Consensus         8 ~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv   84 (267)
T cd06646           8 QHDYELIQRVGSGTYG--DVYKARNLHTGELAAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC   84 (267)
T ss_pred             hhhcchhheeecCCCe--EEEEEEECCCCeEEEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence            3468888999999999  9999998  67788999886543 23345577888999999999999999999998999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      +||+++++|
T Consensus        85 ~e~~~~~~L   93 (267)
T cd06646          85 MEYCGGGSL   93 (267)
T ss_pred             EeCCCCCcH
Confidence            999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.10  E-value=1.4e-09  Score=71.83  Aligned_cols=77  Identities=19%  Similarity=0.179  Sum_probs=63.3

Q ss_pred             eeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCC
Q 045247           43 VIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      .||+|.||  .||++..    .+..+++|.++..........+.+|+..++.++|+|++++++.+......++||||+++
T Consensus         2 ~lg~G~~g--~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05087           2 EIGNGWFG--KVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL   79 (269)
T ss_pred             cccccCCc--eEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence            58999999  9999976    23567888876543223345688899999999999999999999888889999999998


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |+|
T Consensus        80 g~L   82 (269)
T cd05087          80 GDL   82 (269)
T ss_pred             CcH
Confidence            875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.10  E-value=2.4e-10  Score=75.09  Aligned_cols=85  Identities=13%  Similarity=0.232  Sum_probs=72.4

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +..+|...+.||.|.++  .||.+.. .+..+++|.+.... ......+..++..++.++|++++++.+.+......+++
T Consensus         4 ~~~~y~~~~~ig~g~~~--~vy~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (261)
T cd05148           4 PREEFTLERKLGSGYFG--EVWEGLWKNRVRVAIKILKSDD-LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII   80 (261)
T ss_pred             cHHHHHHhhhhccCCCc--cEEEeEecCCCcEEEEeccccc-hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence            44568888999999999  9999998 76778899887653 23456688889999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        81 ~e~~~~~~L   89 (261)
T cd05148          81 TELMEKGSL   89 (261)
T ss_pred             EeecccCCH
Confidence            999998875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.10  E-value=3.6e-10  Score=78.44  Aligned_cols=89  Identities=18%  Similarity=0.257  Sum_probs=72.3

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe--C-----CeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeE
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW--Q-----ERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGC  102 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~  102 (121)
                      +....++|...+.||+|.||  .||++..  .     ...+++|.+...........+..|+..++.+ +|+|++++++.
T Consensus        33 ~~~~~~~~~~~~~LG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~  110 (374)
T cd05106          33 WEFPRDNLQFGKTLGAGAFG--KVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGA  110 (374)
T ss_pred             ccccHHHceehheecCCCcc--cEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence            34445578899999999999  9998875  2     2468999887543233356688899999998 79999999999


Q ss_pred             EecCCccEEEEeccCCCCC
Q 045247          103 CLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~~~~~~lv~e~~~~g~L  121 (121)
                      +......+++|||+++|+|
T Consensus       111 ~~~~~~~~lv~ey~~~g~L  129 (374)
T cd05106         111 CTHGGPVLVITEYCCYGDL  129 (374)
T ss_pred             ecCCCCeEEeHhhccCCcH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.10  E-value=1.2e-09  Score=72.50  Aligned_cols=83  Identities=17%  Similarity=0.209  Sum_probs=70.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      .|.....||.|.++  .||.+..  .+..+++|.+...........+..++..++.+.|++++++.+.+......++|||
T Consensus         5 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06640           5 LFTKLERIGKGSFG--EVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME   82 (277)
T ss_pred             hhhhhhhcccCCCe--EEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence            45666789999999  9999988  6788999988754323446778889999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus        83 ~~~~~~L   89 (277)
T cd06640          83 YLGGGSA   89 (277)
T ss_pred             cCCCCcH
Confidence            9999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.09  E-value=3.5e-12  Score=84.35  Aligned_cols=85  Identities=18%  Similarity=0.284  Sum_probs=70.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeee-EEecC-Ccc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIG-CCLET-PIP  109 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~-~~~~~-~~~  109 (121)
                      ..+|...++||.|+||  .||+...  ++..++.|.++-.. +.+..+.+..|+.+|+++.|||+++.++ .+... .-+
T Consensus        18 l~~y~Il~~IG~GsFg--~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFG--EVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             HHHHHHHHHHcCCcch--heEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence            3467778899999999  9999987  88889999887443 3445688999999999999999999987 44444 448


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++|||++..|+|
T Consensus        96 nivmE~c~~GDL  107 (375)
T KOG0591|consen   96 NIVMELCDAGDL  107 (375)
T ss_pred             HHHHHhhcccCH
Confidence            999999999986

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.09  E-value=4.5e-10  Score=77.84  Aligned_cols=86  Identities=14%  Similarity=0.094  Sum_probs=71.1

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ..++|...+.||+|.||  .||++..  .+..+++|.+....  .......+..++.+++.++|++++++.+++......
T Consensus        41 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          41 KAEDFDVIKVIGRGAFG--EVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CHHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            34578888999999999  9999988  67889999986431  112234567888999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus       119 ~lv~Ey~~gg~L  130 (370)
T cd05596         119 YMVMEYMPGGDL  130 (370)
T ss_pred             EEEEcCCCCCcH
Confidence            999999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.09  E-value=4.6e-10  Score=77.87  Aligned_cols=91  Identities=13%  Similarity=0.126  Sum_probs=73.9

Q ss_pred             HHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           29 KELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        29 ~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      .++....++|...+.||+|.||  .||++..  .+..+++|.+....  .......+..+..++..++|++++++++.+.
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~  113 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFG--EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ  113 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCe--EEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            3444555789999999999999  9999988  67789999886421  1122345677888899999999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....++||||+++|+|
T Consensus       114 ~~~~~~lv~Ey~~gg~L  130 (371)
T cd05622         114 DDRYLYMVMEYMPGGDL  130 (371)
T ss_pred             cCCEEEEEEcCCCCCcH
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=8.1e-10  Score=75.41  Aligned_cols=83  Identities=12%  Similarity=0.014  Sum_probs=69.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.||  .||.+..  .+..+++|.+....  .......+..+..++..++|++++++.+++......++|
T Consensus         2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (331)
T cd05597           2 DFEILKVIGRGAFG--EVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV   79 (331)
T ss_pred             CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence            57788999999999  9999988  67889999986421  012245577788888899999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~e~~~g~~L   88 (331)
T cd05597          80 MDYYVGGDL   88 (331)
T ss_pred             EecCCCCcH
Confidence            999999875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.09  E-value=1.5e-09  Score=71.48  Aligned_cols=84  Identities=15%  Similarity=0.267  Sum_probs=70.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||.|.|+  .||++..  .+..+++|.+....  .......+.+|+..++.++|+|++++.+.+......++
T Consensus         2 ~~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08228           2 ANFQIEKKIGRGQFS--EVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNI   79 (267)
T ss_pred             cceeeeeeeccCCCe--eEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEE
Confidence            468888999999999  9999988  67889999875422  12335668889999999999999999999988889999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||+++|+|
T Consensus        80 v~e~~~~~~L   89 (267)
T cd08228          80 VLELADAGDL   89 (267)
T ss_pred             EEEecCCCcH
Confidence            9999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.09  E-value=1.3e-09  Score=71.71  Aligned_cols=84  Identities=19%  Similarity=0.303  Sum_probs=71.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.++  .||++..  .+..+++|.++...  .......+.+++..+..++|++++++++.+...+..++
T Consensus         2 ~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~l   79 (267)
T cd08224           2 GNFKIEKKIGKGQFS--VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNI   79 (267)
T ss_pred             CceeeeeeeccCCce--EEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            578888999999999  9999998  67889999876422  12335678899999999999999999999998899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++|+|
T Consensus        80 v~e~~~~~~L   89 (267)
T cd08224          80 VLELADAGDL   89 (267)
T ss_pred             EEecCCCCCH
Confidence            9999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.09  E-value=8.9e-10  Score=73.12  Aligned_cols=86  Identities=15%  Similarity=0.228  Sum_probs=70.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      ..++|...+.||+|.++  .||.+..       .+..+++|.+...........+.+++..+..++|+|++++.+.+...
T Consensus         4 ~~~~~~~~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~   81 (277)
T cd05062           4 AREKITMSRELGQGSFG--MVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG   81 (277)
T ss_pred             cHHHceeeeeeccccCC--eEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            45678889999999999  9998865       23568888876443223456688899999999999999999999888


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...+++|||+++|+|
T Consensus        82 ~~~~lv~e~~~~~~L   96 (277)
T cd05062          82 QPTLVIMELMTRGDL   96 (277)
T ss_pred             CCeEEEEecCCCCCH
Confidence            899999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.09  E-value=1.9e-10  Score=83.19  Aligned_cols=85  Identities=22%  Similarity=0.346  Sum_probs=70.6

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--C--C--eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--Q--E--RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~--~--~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .+....+.+.||+|.||  .||+|.+  .  |  ..+++|.++...+......|+.|..+|+.++||++++++|+|.. .
T Consensus       387 ~Re~Itl~r~iG~GqFG--dVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~  463 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFG--DVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q  463 (974)
T ss_pred             ehhhccHHHhhcCCccc--ceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence            33445667899999999  9999998  2  2  34889998886655567889999999999999999999999966 6


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++|||..+.|.|
T Consensus       464 P~WivmEL~~~GEL  477 (974)
T KOG4257|consen  464 PMWIVMELAPLGEL  477 (974)
T ss_pred             ceeEEEecccchhH
Confidence            78999999998865

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.08  E-value=1.3e-09  Score=73.37  Aligned_cols=82  Identities=18%  Similarity=0.252  Sum_probs=68.8

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .++|...+.||.|.|+  .||++..  .+..+++|.+.............+|+..++.++|+|++++.+++......++|
T Consensus         4 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (303)
T cd07869           4 ADSYEKLEKLGEGSYA--TVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV   81 (303)
T ss_pred             cccceEeeeEEecCCE--EEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence            3578889999999999  9999998  67889999987543222234567889999999999999999999999999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      |||+.+
T Consensus        82 ~e~~~~   87 (303)
T cd07869          82 FEYVHT   87 (303)
T ss_pred             EECCCc
Confidence            999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.08  E-value=7.6e-10  Score=79.25  Aligned_cols=89  Identities=17%  Similarity=0.135  Sum_probs=76.1

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .......|....+||.|.|+  .|..+..  ++..+++|.++..... .....+.+++..|..+.|||+++++.+.....
T Consensus        51 ~~~~vg~y~i~~tig~g~f~--~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~  128 (596)
T KOG0586|consen   51 DSNSVGLYVIIKTIGKGNFA--KVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA  128 (596)
T ss_pred             ccccccceeeeeeeccceeE--EEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence            34556778999999999999  9999987  8889999999877522 22355888999999999999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      .+|+||||..+|++
T Consensus       129 ~lylV~eya~~ge~  142 (596)
T KOG0586|consen  129 TLYLVMEYASGGEL  142 (596)
T ss_pred             eeEEEEEeccCchh
Confidence            99999999998864

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.08  E-value=6.2e-10  Score=74.07  Aligned_cols=92  Identities=14%  Similarity=0.142  Sum_probs=73.4

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeE
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGC  102 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~  102 (121)
                      +.++.+..+.++|...+.||+|.++  .||++..  .+..+++|.+....  .....+..++..+..+ +|+|++++++.
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~   83 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYG--KVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGM   83 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCc--EEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence            4556677788899999999999999  9999988  67788899876432  2235567788888888 69999999998


Q ss_pred             Ee-----cCCccEEEEeccCCCCC
Q 045247          103 CL-----ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~-----~~~~~~lv~e~~~~g~L  121 (121)
                      +.     ..+..+++|||+++++|
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~~L  107 (286)
T cd06638          84 YYKKDVKNGDQLWLVLELCNGGSV  107 (286)
T ss_pred             eeecccCCCCeEEEEEeecCCCCH
Confidence            74     34568999999998875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.08  E-value=1e-09  Score=73.30  Aligned_cols=82  Identities=10%  Similarity=0.079  Sum_probs=68.2

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      |...+.||+|.||  .||++..  ++..+++|.+.....  ......+.+|+.++..++|++++++.+.+...+..+++|
T Consensus         2 f~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05631           2 FRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             ceEEEEEecCCCE--EEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence            5667889999999  9999987  688899998865321  112345678899999999999999999998889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        80 e~~~~g~L   87 (285)
T cd05631          80 TIMNGGDL   87 (285)
T ss_pred             EecCCCcH
Confidence            99999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.08  E-value=8.1e-10  Score=76.16  Aligned_cols=83  Identities=8%  Similarity=0.031  Sum_probs=69.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.||  .||.+..  .+..+++|.++...  .......+..+...+..++|++++++++.+......++|
T Consensus         2 ~f~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv   79 (360)
T cd05627           2 DFESLKVIGRGAFG--EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI   79 (360)
T ss_pred             CceEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            57788899999999  9999988  67889999886431  112245677888899999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~E~~~gg~L   88 (360)
T cd05627          80 MEFLPGGDM   88 (360)
T ss_pred             EeCCCCccH
Confidence            999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.08  E-value=9.1e-10  Score=74.91  Aligned_cols=78  Identities=12%  Similarity=0.065  Sum_probs=65.2

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccC
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      +.||+|.||  .||++..  .+..+++|.+....  .......+..++..+..++|+|++++.+.+......++||||++
T Consensus         1 ~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~   78 (323)
T cd05595           1 KLLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN   78 (323)
T ss_pred             CeeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCC
Confidence            368999999  9999987  67889999987532  12234566788899999999999999999999999999999999


Q ss_pred             CCCC
Q 045247          118 YRTL  121 (121)
Q Consensus       118 ~g~L  121 (121)
                      +|+|
T Consensus        79 ~~~L   82 (323)
T cd05595          79 GGEL   82 (323)
T ss_pred             CCcH
Confidence            9875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.08  E-value=6.8e-10  Score=73.02  Aligned_cols=84  Identities=14%  Similarity=0.252  Sum_probs=71.1

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ..++|...+.||.|.++  .||++.+ .+..+++|.++...  .....+..++..++.++|+|++++.+.+......+++
T Consensus         4 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   79 (261)
T cd05068           4 DRTSIQLLRKLGAGQFG--EVWEGLWNNTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV   79 (261)
T ss_pred             chhheeeEEEecccCCc--cEEEEEecCCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence            34568888999999999  9999988 66778999887543  2345678899999999999999999999888999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        80 ~e~~~~~~L   88 (261)
T cd05068          80 TELMKYGSL   88 (261)
T ss_pred             eecccCCcH
Confidence            999988765

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.07  E-value=9.8e-10  Score=74.99  Aligned_cols=84  Identities=14%  Similarity=0.052  Sum_probs=69.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+....  .......+..+..++..++|++++.+.+.+...+..++
T Consensus         1 d~y~i~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~l   78 (331)
T cd05624           1 DDFEIIKVIGRGAFG--EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYL   78 (331)
T ss_pred             CCceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            367888999999999  9999988  67789999886421  11223456777888888999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        79 v~Ey~~gg~L   88 (331)
T cd05624          79 VMDYYVGGDL   88 (331)
T ss_pred             EEeCCCCCcH
Confidence            9999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PHA02988 hypothetical protein; Provisional

Probab=99.07  E-value=4e-09  Score=70.54  Aligned_cols=79  Identities=24%  Similarity=0.399  Sum_probs=65.2

Q ss_pred             CCeeecCCCccceEEEEEeCCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEec----CCccEEEEe
Q 045247           41 REVIKQCDFYITKLYKGFWQERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLE----TPIPILVFE  114 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~----~~~~~lv~e  114 (121)
                      ...+++|.++  .||++.+.+..+++|.+.....  ......+.+|+..+..++|+|++++++++..    ....+++||
T Consensus        25 ~~~i~~g~~~--~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         25 SVLIKENDQN--SIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             CeEEeeCCce--EEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence            3678999999  9999999888999999875431  1114667799999999999999999998866    356889999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus       103 y~~~g~L  109 (283)
T PHA02988        103 YCTRGYL  109 (283)
T ss_pred             eCCCCcH
Confidence            9999875

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.07  E-value=1.8e-10  Score=79.37  Aligned_cols=83  Identities=16%  Similarity=0.109  Sum_probs=71.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|.....||.|..|  .||.+..  .+...++|++......  +...+...|-.+|..++||.+..+++.+......+++
T Consensus        78 ~f~llk~LG~GdiG--~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~  155 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIG--TVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV  155 (459)
T ss_pred             HHHHHHHcCCCCce--eEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence            46667889999999  9999999  5578999999876422  2246677788899999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||++||+|
T Consensus       156 meyCpGGdL  164 (459)
T KOG0610|consen  156 MEYCPGGDL  164 (459)
T ss_pred             EecCCCccH
Confidence            999999986

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.07  E-value=9e-10  Score=76.48  Aligned_cols=87  Identities=14%  Similarity=0.189  Sum_probs=72.6

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC---h-hHHHHHHHHHHHHHhcC-CCCcceeeeEEec
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP---D-SVYKYSINNIVYAAQMD-HKHILKLIGCCLE  105 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~---~-~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~  105 (121)
                      ...+.|.....||+|.|+  .|+.+..  ++..+++|.+.....   . .....+.+|+..++.++ |||++++..++..
T Consensus        14 ~~~g~y~~~~~lG~Gsfg--kV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t   91 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFG--KVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT   91 (370)
T ss_pred             cccCceeeeeeecCCCCe--eEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence            345678999999999999  9999987  778899997766421   1 22455667999999999 9999999999999


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      ....++||||+.+|+|
T Consensus        92 ~~~~~ivmEy~~gGdL  107 (370)
T KOG0583|consen   92 PTKIYIVMEYCSGGDL  107 (370)
T ss_pred             CCeEEEEEEecCCccH
Confidence            9999999999999875

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.07  E-value=5.9e-10  Score=74.22  Aligned_cols=83  Identities=12%  Similarity=0.172  Sum_probs=70.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||+|.++  .||++..  .+..+++|.+...........+.+++..+..++|+|++++++.+......+++||
T Consensus         2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (286)
T cd06622           2 EIEVLDELGKGNYG--SVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME   79 (286)
T ss_pred             hhhhhhhhcccCCe--EEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence            46777899999999  9999988  6788999988754323345678889999999999999999999988899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~l   86 (286)
T cd06622          80 YMDAGSL   86 (286)
T ss_pred             ecCCCCH
Confidence            9998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.07  E-value=1.4e-09  Score=82.33  Aligned_cols=84  Identities=21%  Similarity=0.243  Sum_probs=72.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.++....  .....++.+|+..++.++|||++++++.+...+..++
T Consensus         2 grYeIi~~LGkGgfG--~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyL   79 (932)
T PRK13184          2 QRYDIIRLIGKGGMG--EVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYY   79 (932)
T ss_pred             CCeEEEEEEecCCCE--EEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEE
Confidence            467888999999999  9999998  678899999875431  2235678899999999999999999999999899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++|+|
T Consensus        80 VMEY~eGGSL   89 (932)
T PRK13184         80 TMPYIEGYTL   89 (932)
T ss_pred             EEEcCCCCCH
Confidence            9999999875

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.07  E-value=1.3e-09  Score=74.15  Aligned_cols=78  Identities=10%  Similarity=0.057  Sum_probs=65.3

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccC
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      +.||+|.||  .||++..  .+..+++|.+....  .......+..++..+..++|+|++++.+.+...+..++||||++
T Consensus         1 ~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~   78 (323)
T cd05571           1 KLLGKGTFG--KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYAN   78 (323)
T ss_pred             CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCC
Confidence            368999999  9999987  67889999887532  11234567788999999999999999999999999999999999


Q ss_pred             CCCC
Q 045247          118 YRTL  121 (121)
Q Consensus       118 ~g~L  121 (121)
                      +|+|
T Consensus        79 ~~~L   82 (323)
T cd05571          79 GGEL   82 (323)
T ss_pred             CCcH
Confidence            9875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.07  E-value=1.1e-09  Score=72.01  Aligned_cols=84  Identities=14%  Similarity=0.250  Sum_probs=71.4

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ..++|...+.||.|.++  .||++.. .+..+++|.+....  .....+..++..++.+.|++++++++.+......+++
T Consensus         4 ~~~~~~i~~~ig~g~~~--~v~~~~~~~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   79 (261)
T cd05034           4 PRESLKLERKLGAGQFG--EVWMGTWNGTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV   79 (261)
T ss_pred             chhheeeeeeeccCcce--EEEEEEEcCCceEEEEEecCCc--cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence            45678888999999999  9999988 66778999887543  3346688899999999999999999999888899999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        80 ~e~~~~~~L   88 (261)
T cd05034          80 TEYMSKGSL   88 (261)
T ss_pred             EeccCCCCH
Confidence            999998865

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.07  E-value=1.9e-09  Score=71.77  Aligned_cols=84  Identities=20%  Similarity=0.341  Sum_probs=69.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ++|...+.||+|.|+  .||++..      .+..+++|.+...........+.+|+..++.++|+|++++++.+......
T Consensus         5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   82 (283)
T cd05090           5 SAVRFMEELGECAFG--KIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV   82 (283)
T ss_pred             hhceeeeeccccCCc--ceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence            356777899999999  9999975      23568888887543233346788899999999999999999999998999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++|||+++++|
T Consensus        83 ~lv~e~~~~~~L   94 (283)
T cd05090          83 CMLFEYLNQGDL   94 (283)
T ss_pred             EEEEEcCCCCcH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.06  E-value=6.4e-10  Score=80.58  Aligned_cols=88  Identities=11%  Similarity=0.145  Sum_probs=71.5

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecC
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMD-HKHILKLIGCCLET  106 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~  106 (121)
                      .....+|....+||+|.||  .|+.+..  ++...++|+++...  ..........|.+++.... ||.+++++.++...
T Consensus       364 ~~~l~~F~~l~vLGkGsFG--kV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~  441 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFG--KVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK  441 (694)
T ss_pred             cccccceEEEEEeccCcCc--eEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence            3445689999999999999  9999998  67889999998754  1223455566666666555 99999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      +++|+||||+.||++
T Consensus       442 ~~l~fvmey~~Ggdm  456 (694)
T KOG0694|consen  442 EHLFFVMEYVAGGDL  456 (694)
T ss_pred             CeEEEEEEecCCCcE
Confidence            999999999999973

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.06  E-value=8.9e-10  Score=76.72  Aligned_cols=86  Identities=14%  Similarity=0.104  Sum_probs=74.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMD-HKHILKLIGCCLETPI  108 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~  108 (121)
                      ....|...+.||.|.|+  .|+.+..  +|..+++|.+......  .....+.+|+.+|..+. |||++.+.+.+.....
T Consensus        33 ~~~~Y~l~~~lG~G~Fg--~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~  110 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFG--VVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS  110 (382)
T ss_pred             ccccEEehhhhCCCCce--EEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence            34568888999999999  9999998  6889999999765421  13467899999999999 9999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++|||++.+|+|
T Consensus       111 ~~lvmEL~~GGeL  123 (382)
T KOG0032|consen  111 VYLVMELCEGGEL  123 (382)
T ss_pred             EEEEEEecCCchH
Confidence            9999999999875

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.06  E-value=2.2e-09  Score=70.85  Aligned_cols=85  Identities=15%  Similarity=0.309  Sum_probs=70.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CC---eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QE---RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~---~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      .++|+..+.||+|.++  .||++..  .+   ..+++|.+...........+..++..+..++|+|++++.+.+......
T Consensus         4 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (268)
T cd05063           4 PSHITKQKVIGAGEFG--EVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA   81 (268)
T ss_pred             hHHceEeeEecCCCCc--cEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence            3467888999999999  9999987  33   368888876553233456788899999999999999999999998999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++|||+++++|
T Consensus        82 ~lv~e~~~~~~L   93 (268)
T cd05063          82 MIITEYMENGAL   93 (268)
T ss_pred             EEEEEcCCCCCH
Confidence            999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.06  E-value=1.8e-09  Score=73.61  Aligned_cols=78  Identities=10%  Similarity=0.044  Sum_probs=65.5

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccC
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      +.||+|.||  .||.+..  .+..+++|.+....  .......+..++..+..++|++++++.+.+...+..++||||++
T Consensus         1 ~~lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~   78 (328)
T cd05593           1 KLLGKGTFG--KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVN   78 (328)
T ss_pred             CeeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCC
Confidence            368999999  9999987  67889999987532  12234567788899999999999999999999999999999999


Q ss_pred             CCCC
Q 045247          118 YRTL  121 (121)
Q Consensus       118 ~g~L  121 (121)
                      +|+|
T Consensus        79 ~g~L   82 (328)
T cd05593          79 GGEL   82 (328)
T ss_pred             CCCH
Confidence            9875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.05  E-value=2.6e-09  Score=69.98  Aligned_cols=83  Identities=16%  Similarity=0.205  Sum_probs=69.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||.|.++  .++....  .+..+++|.+.... .......+.+|+..++.++|+|++++++++......+++|
T Consensus         1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~   78 (256)
T cd08221           1 HYIPIRVLGKGAFG--EATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEM   78 (256)
T ss_pred             CceEeeEecccCCc--eEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEE
Confidence            36778899999999  9988887  67788999876543 1234566788999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        79 e~~~~~~L   86 (256)
T cd08221          79 EYANGGTL   86 (256)
T ss_pred             EecCCCcH
Confidence            99998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.05  E-value=1.6e-09  Score=72.45  Aligned_cols=81  Identities=17%  Similarity=0.263  Sum_probs=67.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||.|.|+  .||++..  ++..+++|.++..........+.+|+..++.++|+|++++.+.+......++||
T Consensus         5 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (288)
T cd07871           5 ETYVKLDKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF   82 (288)
T ss_pred             ccceEeeEEecCCCE--EEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            468888999999999  9999988  678899998865432223446678999999999999999999998888899999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+.+
T Consensus        83 e~~~~   87 (288)
T cd07871          83 EYLDS   87 (288)
T ss_pred             eCCCc
Confidence            99874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.05  E-value=1.1e-09  Score=74.65  Aligned_cols=83  Identities=12%  Similarity=0.081  Sum_probs=69.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.|+  .||++..  .+..+++|.+.....  ......+..+..++..++|++++++.+.+......++|
T Consensus         2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv   79 (330)
T cd05601           2 DFDVKSLVGRGHFG--EVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV   79 (330)
T ss_pred             CceEEEEEEeccCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence            67888999999999  9999988  678899999875421  12345577788888899999999999999888999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~e~~~~~~L   88 (330)
T cd05601          80 MEYQPGGDL   88 (330)
T ss_pred             ECCCCCCCH
Confidence            999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=3.1e-09  Score=69.82  Aligned_cols=84  Identities=15%  Similarity=0.227  Sum_probs=70.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ++|...+.||.|.++  .||.+..  .+..+++|.+......    .....+.+++..+..++|+|++++.+.+......
T Consensus         2 ~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   79 (263)
T cd06625           2 TNWRRGKLLGQGAFG--RVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETL   79 (263)
T ss_pred             CcccccceecCCCce--EEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeE
Confidence            478889999999999  9999987  6788999987654211    1235677888999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+++++|
T Consensus        80 ~~v~e~~~~~~l   91 (263)
T cd06625          80 SIFMEYMPGGSV   91 (263)
T ss_pred             EEEEEECCCCcH
Confidence            999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.05  E-value=2.3e-09  Score=72.02  Aligned_cols=83  Identities=17%  Similarity=0.175  Sum_probs=70.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..|...+.||+|.++  .||++..  .+..+++|.+.... ......+..++..++.++|+|++++++.+......++||
T Consensus        19 ~~y~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          19 KKYTRFEKIGQGASG--TVYTAIDIATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhceeeeeeccCCCe--EEEEEEECCCCCEEEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            468888999999999  9999987  67889999887543 233456778888999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        96 e~~~~~~L  103 (297)
T cd06656          96 EYLAGGSL  103 (297)
T ss_pred             cccCCCCH
Confidence            99998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.05  E-value=3e-09  Score=70.24  Aligned_cols=77  Identities=19%  Similarity=0.253  Sum_probs=62.4

Q ss_pred             eeecCCCccceEEEEEe-C---CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCC
Q 045247           43 VIKQCDFYITKLYKGFW-Q---ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~-~---~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      .||+|.||  .||++.. .   ...+++|.+...........+.+++..++.++|+|++++++.+......+++|||+++
T Consensus         2 ~lg~G~fg--~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05042           2 EIGNGWFG--KVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL   79 (269)
T ss_pred             cCCccCCc--eEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence            58999999  9999975 2   3457777766443233345678899999999999999999999988999999999998


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |+|
T Consensus        80 g~L   82 (269)
T cd05042          80 GDL   82 (269)
T ss_pred             CcH
Confidence            875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.04  E-value=8.8e-10  Score=73.44  Aligned_cols=82  Identities=17%  Similarity=0.272  Sum_probs=68.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||+|.|+  .||++..  .+..+++|.+..... ......+.+|+..+..++|+|++++.+++......++||
T Consensus         2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (287)
T cd07848           2 KFEVLGVVGEGAYG--VVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF   79 (287)
T ss_pred             CceEEEEecccCCE--EEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence            57788899999999  9999998  677899998865421 122456778999999999999999999999889999999


Q ss_pred             eccCCCC
Q 045247          114 EYGEYRT  120 (121)
Q Consensus       114 e~~~~g~  120 (121)
                      ||++++.
T Consensus        80 e~~~~~~   86 (287)
T cd07848          80 EYVEKNM   86 (287)
T ss_pred             ecCCCCH
Confidence            9998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.04  E-value=2.1e-09  Score=76.87  Aligned_cols=81  Identities=15%  Similarity=0.111  Sum_probs=68.4

Q ss_pred             CCcCCeeecCCCccceEEEEEe--C-CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--Q-ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~-~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||.|.++  .||.+..  . +..+++|.+.... ......+..|+..+..++|+|++++++.+...+..++|||
T Consensus        69 y~~~~~lg~G~~g--~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         69 YVLTTLVGRNPTT--AAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             EEEEEEEEeCCCc--EEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence            7788899999999  9999987  3 5667788665443 3345567789999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus       146 ~~~gg~L  152 (478)
T PTZ00267        146 YGSGGDL  152 (478)
T ss_pred             CCCCCCH
Confidence            9999976

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.04  E-value=3.7e-09  Score=69.44  Aligned_cols=84  Identities=15%  Similarity=0.162  Sum_probs=71.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||.|.++  .||++..  .+..+++|.+...........+..++..++.++|++++++.+.+...+..++++
T Consensus         1 ~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~   78 (267)
T cd06610           1 DDYELIEVIGVGATA--VVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM   78 (267)
T ss_pred             CcceeeeeecCCCCe--EEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence            367888999999999  9999987  677889998875432235677888999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      |++++++|
T Consensus        79 e~~~~~~l   86 (267)
T cd06610          79 PYLSGGSL   86 (267)
T ss_pred             eccCCCcH
Confidence            99998764

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.04  E-value=2.2e-09  Score=70.94  Aligned_cols=83  Identities=17%  Similarity=0.268  Sum_probs=69.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CC---eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QE---RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~---~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .|...+.||.|.|+  .||++..  .+   ..+++|.+...........+..++..++.+.|+|++++.+.+......++
T Consensus         5 ~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l   82 (269)
T cd05065           5 CVKIEEVIGAGEFG--EVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI   82 (269)
T ss_pred             HeEEEeEecCCCCC--eEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence            46778899999999  9999987  33   35889988765323446778999999999999999999999988889999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++|+|
T Consensus        83 v~e~~~~~~L   92 (269)
T cd05065          83 ITEFMENGAL   92 (269)
T ss_pred             EEecCCCCcH
Confidence            9999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.03  E-value=6.9e-10  Score=75.96  Aligned_cols=83  Identities=17%  Similarity=0.081  Sum_probs=70.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.||  .||++..  .+..+++|.+....  .......+..+...+..++|++++++++.+......++|
T Consensus         2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (350)
T cd05573           2 DFEVIKVIGRGAFG--EVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV   79 (350)
T ss_pred             CceEEEEEEeCCcE--EEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence            57788999999999  9999998  68889999987532  012345678888999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~e~~~~~~L   88 (350)
T cd05573          80 MEYMPGGDL   88 (350)
T ss_pred             EcCCCCCCH
Confidence            999998875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.03  E-value=1.2e-09  Score=71.98  Aligned_cols=82  Identities=16%  Similarity=0.390  Sum_probs=70.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .+|...+.||.|.++  .||++.+  .+..+++|.+....  .....+.+++..+..+.|++++++++.+......+++|
T Consensus         6 ~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (263)
T cd05052           6 TDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   81 (263)
T ss_pred             HHeEEeeecCCcccc--eEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence            457778899999999  9999988  57789999887542  34567888999999999999999999998889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        82 e~~~~~~L   89 (263)
T cd05052          82 EFMTYGNL   89 (263)
T ss_pred             EeCCCCcH
Confidence            99998865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.03  E-value=5.8e-10  Score=74.03  Aligned_cols=82  Identities=18%  Similarity=0.230  Sum_probs=68.5

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |...+.||+|.++  .||++..  .+..+++|.+...........+..++..++.++|+|++++.+.+......++|+||
T Consensus         6 y~~~~~l~~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           6 FTKLERIGKGSFG--EVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHhcCCCCe--eEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            4445678999999  9999987  67789999887543234456788899999999999999999999999999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        84 ~~~~~L   89 (277)
T cd06642          84 LGGGSA   89 (277)
T ss_pred             cCCCcH
Confidence            998764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.03  E-value=2.9e-09  Score=70.52  Aligned_cols=83  Identities=17%  Similarity=0.197  Sum_probs=70.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|.....||.|.++  .||++..  .+..+++|.+...........+.+++..++.++|+|++++.+.+......++++|
T Consensus         2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (274)
T cd06609           2 LFTLLECIGKGSFG--EVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME   79 (274)
T ss_pred             hhhhhhhhcCCCCe--EEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence            46677889999999  9999998  6788999988755323345667889999999999999999999998899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~L   86 (274)
T cd06609          80 YCGGGSC   86 (274)
T ss_pred             eeCCCcH
Confidence            9998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.03  E-value=2.3e-09  Score=70.05  Aligned_cols=83  Identities=19%  Similarity=0.253  Sum_probs=69.8

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||+|.++  .+|++..  .+..+++|.+.... .......+..++..++.++|+|++++++.+......+++|
T Consensus         1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08529           1 DFEILNKIGKGSFG--VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM   78 (256)
T ss_pred             CceEeEEecCCCCe--EEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence            36667889999999  9999988  67888999886432 2344567888999999999999999999999889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        79 e~~~~~~L   86 (256)
T cd08529          79 EYAENGDL   86 (256)
T ss_pred             EeCCCCcH
Confidence            99998864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.03  E-value=1.9e-09  Score=71.32  Aligned_cols=85  Identities=14%  Similarity=0.180  Sum_probs=69.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CC-----eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QE-----RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .++|...+.||+|.|+  .||++..  ..     ..+++|.+...........+..++..+..++|+|++++++.+....
T Consensus         5 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   82 (277)
T cd05032           5 REKITLIRELGQGSFG--MVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ   82 (277)
T ss_pred             hHHeeEEeEecCCCCc--eEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence            4567888999999999  9999887  22     5688998765532233566788899999999999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..+++|||+++|+|
T Consensus        83 ~~~~v~e~~~~~~L   96 (277)
T cd05032          83 PTLVVMELMAKGDL   96 (277)
T ss_pred             CcEEEEecCCCCCH
Confidence            99999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.03  E-value=5.2e-09  Score=68.94  Aligned_cols=83  Identities=18%  Similarity=0.369  Sum_probs=69.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCC-----hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLP-----DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~-----~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      +|...+.||.|.|+  .||++.. .+..+++|.+.....     ......+.+++..++.++|+|++++.+.+......+
T Consensus         1 ~~~~~~~ig~g~~~--~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           1 EWTKGEVLGKGAYG--TVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             CccccceEeccCCe--EEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE
Confidence            36778899999999  9999988 778889998764321     112356788899999999999999999999989999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +++||+++++|
T Consensus        79 lv~e~~~~~~L   89 (265)
T cd06631          79 IFMEFVPGGSI   89 (265)
T ss_pred             EEEecCCCCcH
Confidence            99999998875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.03  E-value=3.6e-09  Score=69.34  Aligned_cols=82  Identities=15%  Similarity=0.231  Sum_probs=71.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      ++|...+.||.|.+|  .||++...+..+++|.+....  ....++..++..++.++|+|++++++.+......+++|||
T Consensus         6 ~~~~~~~~ig~g~~g--~v~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   81 (256)
T cd05039           6 KELKLGATIGKGEFG--DVMLGDYRGQKVAVKCLKDDS--TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY   81 (256)
T ss_pred             hhccceeeeecCCCc--eEEEEEecCcEEEEEEeccch--hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence            467888999999999  999998877889999987653  2456788899999999999999999999888899999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        82 ~~~~~L   87 (256)
T cd05039          82 MAKGSL   87 (256)
T ss_pred             cCCCcH
Confidence            998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.03  E-value=2.4e-09  Score=71.60  Aligned_cols=83  Identities=12%  Similarity=0.121  Sum_probs=70.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.++  .||.+..  .+..+++|.+.....  ......+..++..++.++|+|++++++.+......+++
T Consensus         2 ~y~~~~~ig~g~~~--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   79 (290)
T cd05580           2 DFEFIKTLGTGSFG--RVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV   79 (290)
T ss_pred             ceEEEEEeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence            57778899999999  9999988  678899998865321  12346678899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        80 ~e~~~~~~L   88 (290)
T cd05580          80 MEYVPGGEL   88 (290)
T ss_pred             EecCCCCCH
Confidence            999988865

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.03  E-value=2.4e-09  Score=71.58  Aligned_cols=84  Identities=15%  Similarity=0.148  Sum_probs=71.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .+.|...+.||.|.++  .||++..  .+..+++|.+.... ......+..++..++.+.|+|++++.+.+......++|
T Consensus        11 ~~~y~i~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (292)
T cd06644          11 NEVWEIIGELGDGAFG--KVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM   87 (292)
T ss_pred             chhhhhhheecCCCCe--EEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence            3467788899999999  9999988  57888999887653 34456788889999999999999999999888899999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        88 ~e~~~~~~l   96 (292)
T cd06644          88 IEFCPGGAV   96 (292)
T ss_pred             EecCCCCcH
Confidence            999998764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.03  E-value=1.7e-09  Score=71.66  Aligned_cols=84  Identities=25%  Similarity=0.395  Sum_probs=70.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-C------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-Q------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      .+|...+.||+|.++  .||++.. .      ...+++|.+...........+.+|+..+..+.|+|++++.+.+.....
T Consensus         5 ~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           5 DTIVLKRELGEGAFG--KVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             HHhhHHhhccccCCc--eEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            357778899999999  9999976 2      356899988765422245678899999999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .+++|||+++++|
T Consensus        83 ~~lv~e~~~~~~L   95 (280)
T cd05049          83 PIMVFEYMEHGDL   95 (280)
T ss_pred             eEEEEecCCCCCH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.03  E-value=8.3e-10  Score=73.52  Aligned_cols=83  Identities=13%  Similarity=0.112  Sum_probs=71.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|....++|.|+||  .|.....  .+...++|.+.....  -++..+..+|..+|+.+.||.++++.+.+.....+++|
T Consensus        45 dfe~~~tlGtGSFG--rV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   45 DFERLKTLGTGSFG--RVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhheeeeccCccc--eEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            67778899999999  9998887  677899999876431  13356778889999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus       123 meyv~GGEl  131 (355)
T KOG0616|consen  123 MEYVPGGEL  131 (355)
T ss_pred             EeccCCccH
Confidence            999999975

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.02  E-value=3.6e-09  Score=70.08  Aligned_cols=83  Identities=20%  Similarity=0.336  Sum_probs=68.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC---CCCcceeeeEEecCCccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD---HKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~---h~~~~~~~~~~~~~~~~~l  111 (121)
                      .|...+.||.|.++  .+|++..  .+..+++|.+...........+..++..++.+.   |++++++.+.+......++
T Consensus         2 ~y~~~~~l~~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYG--AVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCc--eEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            46677889999999  9999998  678899998875432334556778888888876   9999999999988889999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++++|
T Consensus        80 v~e~~~~~~L   89 (277)
T cd06917          80 IMEYAEGGSV   89 (277)
T ss_pred             EEecCCCCcH
Confidence            9999998865

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.02  E-value=3.5e-09  Score=70.33  Aligned_cols=84  Identities=20%  Similarity=0.297  Sum_probs=69.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CC-----eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QE-----RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      .+|...+.||+|.++  .||.+..  .+     ..+++|.+...........+.+++..+..++|++++++++.+.....
T Consensus         5 ~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T cd05048           5 SAVRFLEELGEGAFG--KVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP   82 (283)
T ss_pred             HHcchhhcccCccCC--cEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence            367888999999999  9999987  22     45888887654423345678889999999999999999999988888


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .+++|||+++|+|
T Consensus        83 ~~~~~e~~~~~~L   95 (283)
T cd05048          83 TCMLFEYLAHGDL   95 (283)
T ss_pred             eEEEEecCCCCcH
Confidence            9999999998875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.02  E-value=3.2e-09  Score=71.34  Aligned_cols=83  Identities=17%  Similarity=0.177  Sum_probs=70.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..|...+.||.|.++  .||++..  .+..+++|.+.... ......+..++..++.++|+|++++.+.+......++||
T Consensus        20 ~~y~~~~~lg~g~~~--~v~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~   96 (296)
T cd06654          20 KKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (296)
T ss_pred             cceeeEEEecCCCCe--EEEEEEECCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence            367778899999999  9999987  67789999887543 233566788889999999999999999999889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        97 e~~~~~~L  104 (296)
T cd06654          97 EYLAGGSL  104 (296)
T ss_pred             cccCCCCH
Confidence            99998875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.02  E-value=3.2e-09  Score=70.85  Aligned_cols=85  Identities=25%  Similarity=0.334  Sum_probs=70.5

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .++|.....||.|.|+  .||++..       .+..+++|.+...........+..++..++.++|++++++.+.+....
T Consensus         4 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~   81 (288)
T cd05050           4 RNNIEYVRDIGQGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK   81 (288)
T ss_pred             hHhceecccccccccc--cEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence            4568888999999999  9999875       245688998876542333566888999999999999999999998888


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++++||+++|+|
T Consensus        82 ~~~lv~e~~~~~~L   95 (288)
T cd05050          82 PMCLLFEYMAYGDL   95 (288)
T ss_pred             ccEEEEecCCCCCH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.02  E-value=3.7e-09  Score=71.20  Aligned_cols=84  Identities=8%  Similarity=0.076  Sum_probs=69.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.++  .||++..  .+..+++|.+.....  ......+..++..+..++|+|++++++.+......++
T Consensus         1 ~~y~~~~~l~~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l   78 (305)
T cd05609           1 EDFETIKLISNGAYG--AVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCM   78 (305)
T ss_pred             CCceEeeEeecCCCe--eEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEE
Confidence            367788999999999  9999988  677899998865421  1224567788899999999999999999988889999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++++|
T Consensus        79 v~e~~~g~~L   88 (305)
T cd05609          79 VMEYVEGGDC   88 (305)
T ss_pred             EEecCCCCcH
Confidence            9999998875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=1.5e-10  Score=80.14  Aligned_cols=83  Identities=18%  Similarity=0.251  Sum_probs=74.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      -|...+.||.|.||  .||+|.+  ++..+++|.+.......+...+.+++..+..++++|+.+.++.+..+..++++||
T Consensus        14 ~~~~~~~IgrGsfG--~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   14 LYTKLELIGRGSFG--EVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccchhccccccc--eeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            46666899999999  9999999  7788999999987655667889999999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+.+|++
T Consensus        92 y~~gGsv   98 (467)
T KOG0201|consen   92 YCGGGSV   98 (467)
T ss_pred             HhcCcch
Confidence            9999874

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.02  E-value=4e-09  Score=70.41  Aligned_cols=83  Identities=13%  Similarity=0.077  Sum_probs=68.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~~~~lv  112 (121)
                      +|...+.||.|.++  .||.+..  .+..+++|.+...........+.+++..++.++|+|++++++.+..  ....+++
T Consensus         2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           2 KIVELSRLGEGAGG--SVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             ceEEEEEeccCCce--EEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence            56777899999999  9999998  6788999988754322345668889999999999999999998754  3468999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        80 ~e~~~~~~L   88 (287)
T cd06621          80 MEYCEGGSL   88 (287)
T ss_pred             EEecCCCCH
Confidence            999998864

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.01  E-value=3.6e-09  Score=71.30  Aligned_cols=84  Identities=18%  Similarity=0.267  Sum_probs=67.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe--EEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER--LISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~--~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|.||  .||++..  .+.  .+++|.+...........+..|+..+..+ +|+|++++.+.+......+
T Consensus         7 ~~~~~~~~lg~G~~g--~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           7 NDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             hhceeeeeecCCCCc--eEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            467888999999999  9999987  443  35666665433233456778899989998 7999999999999989999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++|||+++|+|
T Consensus        85 lv~e~~~~~~L   95 (303)
T cd05088          85 LAIEYAPHGNL   95 (303)
T ss_pred             EEEEeCCCCcH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=1.8e-09  Score=73.09  Aligned_cols=76  Identities=16%  Similarity=0.095  Sum_probs=63.7

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCC
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      ||+|.||  .||++..  .+..+++|.+....  .......+..|+..+..++|+|++++.+.+...+..++||||+++|
T Consensus         1 lg~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   78 (312)
T cd05585           1 IGKGSFG--KVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGG   78 (312)
T ss_pred             CCcCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCC
Confidence            6899999  9999988  67789999886432  1223456778889999999999999999999999999999999998


Q ss_pred             CC
Q 045247          120 TL  121 (121)
Q Consensus       120 ~L  121 (121)
                      +|
T Consensus        79 ~L   80 (312)
T cd05585          79 EL   80 (312)
T ss_pred             cH
Confidence            75

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.01  E-value=2.4e-09  Score=73.11  Aligned_cols=83  Identities=12%  Similarity=0.035  Sum_probs=68.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.||  .||++..  .+..+++|.+....  .......+..+..++..++|++++++.+.+...+..++|
T Consensus         2 ~y~~~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (332)
T cd05623           2 DFEILKVIGRGAFG--EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV   79 (332)
T ss_pred             CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence            57788999999999  9999988  56778999886421  011234467788888889999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~ey~~~g~L   88 (332)
T cd05623          80 MDYYVGGDL   88 (332)
T ss_pred             EeccCCCcH
Confidence            999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.01  E-value=5.8e-09  Score=69.71  Aligned_cols=83  Identities=23%  Similarity=0.373  Sum_probs=67.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-C------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-Q------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      +|...+.||+|.|+  .||++.. .      ...+++|.+...........+..|+..++.++|+|++++.+.+......
T Consensus         1 ~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFG--KVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL   78 (290)
T ss_pred             CccccccccCcCCc--ceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence            36677899999999  9999976 1      1357787776554334456788899999999999999999999988999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+.+|+|
T Consensus        79 ~lv~e~~~~~~L   90 (290)
T cd05045          79 LLIVEYAKYGSL   90 (290)
T ss_pred             EEEEEecCCCCH
Confidence            999999998865

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.01  E-value=2.9e-09  Score=81.62  Aligned_cols=79  Identities=27%  Similarity=0.348  Sum_probs=65.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..+...+.||+|.||  .||++..  .+..+++|.+....  ..   ...++..++.++|||++++++++......++||
T Consensus       690 ~~~~~~~~ig~G~~g--~Vy~~~~~~~~~~vavK~~~~~~--~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~  762 (968)
T PLN00113        690 SSLKEENVISRGKKG--ASYKGKSIKNGMQFVVKEINDVN--SI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH  762 (968)
T ss_pred             hhCCcccEEccCCCe--eEEEEEECCCCcEEEEEEccCCc--cc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence            457778899999999  9999987  67889999886542  11   123467788999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       763 Ey~~~g~L  770 (968)
T PLN00113        763 EYIEGKNL  770 (968)
T ss_pred             eCCCCCcH
Confidence            99999875

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.01  E-value=2.2e-09  Score=70.54  Aligned_cols=81  Identities=16%  Similarity=0.214  Sum_probs=67.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      +|...+.||+|.++  .||.+.+ .+..+++|.+....  .....+.+++..+..++|+|++++++++......+++|||
T Consensus         5 ~~~~~~~lg~G~~~--~vy~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05113           5 DLTFLKELGTGQFG--VVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY   80 (256)
T ss_pred             HeEEeeEecCcccc--eEEEEEecCCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence            56777889999999  9999987 55568888877543  2345688899999999999999999999888889999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++|+|
T Consensus        81 ~~~~~l   86 (256)
T cd05113          81 MSNGCL   86 (256)
T ss_pred             CCCCcH
Confidence            988764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.01  E-value=3e-09  Score=71.27  Aligned_cols=84  Identities=15%  Similarity=0.245  Sum_probs=68.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-C---------------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCccee
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-Q---------------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKL   99 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~---------------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~   99 (121)
                      +.|...+.||+|.||  .||.+.. .               ...+++|.++..........+.+++..+..++|++++++
T Consensus         5 ~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           5 QQLRLKEKLGEGQFG--EVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             HhCeehhccCCCCCc--eEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            468888999999999  9998764 1               124788888754323345678899999999999999999


Q ss_pred             eeEEecCCccEEEEeccCCCCC
Q 045247          100 IGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       100 ~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++.+......+++|||+++++|
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L  104 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDL  104 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcH
Confidence            9999999999999999998864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=3.5e-09  Score=69.42  Aligned_cols=84  Identities=17%  Similarity=0.223  Sum_probs=71.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .++|...+.+|.|.++  .+|++..  .+..+++|.+.... ......+..++..++.++|+|++++++.+......+++
T Consensus         2 ~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~   78 (262)
T cd06613           2 QEDYELIQRIGSGTYG--DVYKARDIATGELVAIKVIKLEP-GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV   78 (262)
T ss_pred             ccceEEEEEecCCCce--EEEEeEecCCCCEEEEEEEEcCc-hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence            3568888999999999  9999988  56778999887653 23457788899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        79 ~e~~~~~~l   87 (262)
T cd06613          79 MEYCGGGSL   87 (262)
T ss_pred             EeCCCCCcH
Confidence            999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.01  E-value=3.5e-09  Score=72.26  Aligned_cols=78  Identities=15%  Similarity=0.185  Sum_probs=63.7

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.+....  .......+..+..++..+ +|+|++++.+++......++||||+
T Consensus         1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~   78 (329)
T cd05588           1 RVIGRGSYA--KVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV   78 (329)
T ss_pred             CeEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence            368999999  9999988  67889999987532  112235567788888777 6999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~g~L   83 (329)
T cd05588          79 SGGDL   83 (329)
T ss_pred             CCCCH
Confidence            99875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.01  E-value=7.1e-09  Score=68.00  Aligned_cols=83  Identities=14%  Similarity=0.145  Sum_probs=71.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||.|.++  .+|++..  .+..+++|.+...........+..++..+..++|++++++.+.+......++++|
T Consensus         2 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06623           2 DLERVKVLGQGSSG--VVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE   79 (264)
T ss_pred             cceeeeeeeecCCe--EEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence            57778999999999  9999988  5888999988766422346778889999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~L   86 (264)
T cd06623          80 YMDGGSL   86 (264)
T ss_pred             ecCCCcH
Confidence            9998875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.00  E-value=3.2e-09  Score=72.26  Aligned_cols=78  Identities=12%  Similarity=0.057  Sum_probs=64.5

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccC
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      +.||+|.||  .||.+..  .+..+++|.+....  .......+..++..+..++|++++++.+.+......++||||++
T Consensus         1 ~~lG~G~~g--~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~   78 (325)
T cd05594           1 KLLGKGTFG--KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN   78 (325)
T ss_pred             CeeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            368999999  9999987  77889999887532  11224556778888999999999999999999999999999999


Q ss_pred             CCCC
Q 045247          118 YRTL  121 (121)
Q Consensus       118 ~g~L  121 (121)
                      +|+|
T Consensus        79 ~~~L   82 (325)
T cd05594          79 GGEL   82 (325)
T ss_pred             CCcH
Confidence            9864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.00  E-value=1.7e-09  Score=71.33  Aligned_cols=83  Identities=13%  Similarity=0.196  Sum_probs=69.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.++  .||.+..  .+..+++|.++... ......+.+++..+..++|+|++++.+.+......++++
T Consensus         9 ~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~   85 (267)
T cd06645           9 EDFELIQRIGSGTYG--DVYKARNVNTGELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM   85 (267)
T ss_pred             HHHHHHHHhCCCCCe--EEEEEEEcCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence            356677889999999  9999988  67889999887553 233455778888999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        86 e~~~~~~L   93 (267)
T cd06645          86 EFCGGGSL   93 (267)
T ss_pred             eccCCCcH
Confidence            99998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.00  E-value=1.7e-10  Score=84.34  Aligned_cols=82  Identities=17%  Similarity=0.347  Sum_probs=70.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe---CC--eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW---QE--RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~---~~--~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .+...+.||+|.||  .|++|.|   .|  ..+++|+++..........|+.|+..|.+|+|+|+++++|+..+ ...++
T Consensus       111 ~i~l~e~LG~GsFg--vV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mM  187 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFG--VVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMM  187 (1039)
T ss_pred             HHHHHHHhcCccee--eEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhH
Confidence            44556889999999  9999999   33  35899999876544467889999999999999999999999987 77899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      |+|.++.|+|
T Consensus       188 V~ELaplGSL  197 (1039)
T KOG0199|consen  188 VFELAPLGSL  197 (1039)
T ss_pred             HhhhcccchH
Confidence            9999999875

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.00  E-value=4.2e-09  Score=70.04  Aligned_cols=81  Identities=17%  Similarity=0.165  Sum_probs=68.2

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |...+.||+|.++  .||++..  .+..+++|.+.... ......+..++..++.++|+|++++.+.+......++++||
T Consensus         7 ~~i~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~   83 (282)
T cd06643           7 WEIIGELGDGAFG--KVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   83 (282)
T ss_pred             HHHHhhcccCCCe--EEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence            4556789999999  9999998  56778888886543 34456788899999999999999999999998999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        84 ~~~~~l   89 (282)
T cd06643          84 CAGGAV   89 (282)
T ss_pred             cCCCcH
Confidence            998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.00  E-value=3.6e-09  Score=69.93  Aligned_cols=83  Identities=16%  Similarity=0.225  Sum_probs=67.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-----h----HHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-----S----VYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-----~----~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.++.....     .    ....+..|+..+..++|++++++++.+..
T Consensus         2 ~~~~~~~lg~g~~~--~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   79 (272)
T cd06629           2 KWVKGELIGKGTYG--RVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT   79 (272)
T ss_pred             ceeecceecccCce--EEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc
Confidence            36677899999999  9999987  6778999987542100     0    12456778889999999999999999999


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      .+..++|+||+++++|
T Consensus        80 ~~~~~lv~e~~~~~~L   95 (272)
T cd06629          80 EEYLSIFLEYVPGGSI   95 (272)
T ss_pred             CCceEEEEecCCCCcH
Confidence            9999999999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.99  E-value=5e-09  Score=69.57  Aligned_cols=85  Identities=18%  Similarity=0.291  Sum_probs=69.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-C------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-Q------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .++|...+.||+|.++  .||++.+ .      +..+++|.............+..++..++.++|+|++++++.+....
T Consensus         5 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (277)
T cd05036           5 RDSITLLRALGHGAFG--EVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL   82 (277)
T ss_pred             HHHcEeeeECCCCCCC--cEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence            3568888999999999  9999988 3      34578887765432333456888999999999999999999998888


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..+++|||+++++|
T Consensus        83 ~~~lv~e~~~g~~L   96 (277)
T cd05036          83 PRFILLELMAGGDL   96 (277)
T ss_pred             CcEEEEecCCCCCH
Confidence            89999999998875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.99  E-value=2.3e-09  Score=73.56  Aligned_cols=85  Identities=13%  Similarity=0.255  Sum_probs=68.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEec-
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLE-  105 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~-  105 (121)
                      .++|...+.||+|.||  .||++.+       .+..+++|.++..........+..|+..+..+ +|+|++++++.+.. 
T Consensus         6 ~~~~~~~~~lG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (343)
T cd05103           6 RDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   83 (343)
T ss_pred             hhHhcccccccCCccc--eEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence            4578889999999999  9999974       35679999987643233456788899999999 58999999987754 


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      ....+++|||+++|+|
T Consensus        84 ~~~~~lv~ey~~~g~L   99 (343)
T cd05103          84 GGPLMVIVEFCKFGNL   99 (343)
T ss_pred             CCceEEEEeccCCCcH
Confidence            4567899999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.99  E-value=2.5e-09  Score=72.74  Aligned_cols=82  Identities=13%  Similarity=0.164  Sum_probs=63.9

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHH---HhcCCCCcceeeeEEecCCccE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYA---AQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l---~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      |...+.||+|.+|  .||.+..  .+..+++|.+....  .......+..+...+   ..++|+|++++++++......+
T Consensus         1 y~i~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFG--KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence            4556789999999  9999988  67889999987432  112234455555443   5677999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        79 lv~E~~~~~~L   89 (324)
T cd05589          79 FVMEYAAGGDL   89 (324)
T ss_pred             EEEcCCCCCcH
Confidence            99999999875

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.99  E-value=4.4e-09  Score=70.54  Aligned_cols=85  Identities=16%  Similarity=0.229  Sum_probs=68.7

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe------------------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW------------------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHI   96 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~------------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~   96 (121)
                      .++|...+.||+|.|+  .||.+..                  ....+++|.+...........+..|+..+..++|+|+
T Consensus         4 ~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (296)
T cd05095           4 RKRLTFKEKLGEGQFG--EVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNI   81 (296)
T ss_pred             hhhceeeeeccCCCCC--eEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc
Confidence            3468888999999999  9998743                  1235788887654323335678899999999999999


Q ss_pred             ceeeeEEecCCccEEEEeccCCCCC
Q 045247           97 LKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        97 ~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +++++.+...+..+++|||+++|+|
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L  106 (296)
T cd05095          82 IRLLAVCITSDPLCMITEYMENGDL  106 (296)
T ss_pred             ceEEEEEecCCccEEEEEeCCCCcH
Confidence            9999999998999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.99  E-value=3.9e-09  Score=71.23  Aligned_cols=81  Identities=19%  Similarity=0.266  Sum_probs=67.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..|...+.||+|.||  .||++..  .+..+++|.+...........+.+|+..++.++|+|++++++.+...+..+++|
T Consensus         6 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   83 (309)
T cd07872           6 ETYIKLEKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF   83 (309)
T ss_pred             CceEEEEEecccCCE--EEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence            357888999999999  9999988  677899998875432223345678899999999999999999999989999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+++
T Consensus        84 e~~~~   88 (309)
T cd07872          84 EYLDK   88 (309)
T ss_pred             eCCCC
Confidence            99875

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.99  E-value=4.2e-09  Score=71.68  Aligned_cols=79  Identities=10%  Similarity=0.161  Sum_probs=64.7

Q ss_pred             CCeeecC--CCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           41 REVIKQC--DFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        41 ~~~ig~g--~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      .++||+|  .++  .||++..  ++..+++|.+..... ......+..++.+++.++|+|++++++.+...+..++||||
T Consensus         3 ~~~ig~G~~~~~--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           3 LTVIGRGFEDLM--TVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhhccccccceE--EEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence            4678888  677  8999888  678899999875431 23345667788899999999999999999999999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++|+|
T Consensus        81 ~~~~~l   86 (327)
T cd08227          81 MAYGSA   86 (327)
T ss_pred             cCCCcH
Confidence            998864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.99  E-value=5.8e-09  Score=70.32  Aligned_cols=87  Identities=17%  Similarity=0.252  Sum_probs=70.3

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEe
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCL  104 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~  104 (121)
                      ...++|...+.||+|.|+  .||.+..       .+..+++|.+...........+..|+..++.+ +|+|++++++.+.
T Consensus        32 ~~~~~~~~~~~ig~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  109 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFG--KVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT  109 (302)
T ss_pred             ccHHHeEEcceeeccCCe--eEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence            344568889999999999  9998864       23468888876543233456788899999999 6999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....+++|||+++|+|
T Consensus       110 ~~~~~~lv~e~~~~~~L  126 (302)
T cd05055         110 IGGPILVITEYCCYGDL  126 (302)
T ss_pred             cCCceEEEEEcCCCCcH
Confidence            88999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.99  E-value=3.5e-09  Score=69.64  Aligned_cols=82  Identities=11%  Similarity=0.211  Sum_probs=68.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .++|...+.||.|.||  .||++.. .+..+++|.+....  .....+..|+.+++.++|+|++++.+.+ .....+++|
T Consensus         5 ~~~~~~~~~ig~G~~g--~v~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~   79 (260)
T cd05067           5 RETLKLVKKLGAGQFG--EVWMGYYNGHTKVAIKSLKQGS--MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIIT   79 (260)
T ss_pred             hHHceeeeeeccCccc--eEEeeecCCCceEEEEEecCCC--CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEE
Confidence            4568888999999999  9999988 77889999887653  3345678899999999999999999876 456789999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        80 e~~~~~~L   87 (260)
T cd05067          80 EYMENGSL   87 (260)
T ss_pred             EcCCCCCH
Confidence            99998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.99  E-value=5.8e-09  Score=70.64  Aligned_cols=83  Identities=20%  Similarity=0.452  Sum_probs=67.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe----EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER----LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~----~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      .+|...+.||+|.||  .||++.+  .+.    .+++|.+...........+..++..+..++|+|++++++.+.. ...
T Consensus         7 ~~f~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~-~~~   83 (316)
T cd05108           7 TEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STV   83 (316)
T ss_pred             hhceeeeeeecCCCc--eEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-CCc
Confidence            368888999999999  9999986  333    3788888654323445678889999999999999999998865 467


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+++|+|
T Consensus        84 ~~v~e~~~~g~l   95 (316)
T cd05108          84 QLITQLMPFGCL   95 (316)
T ss_pred             eeeeecCCCCCH
Confidence            899999998875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.98  E-value=2.7e-09  Score=70.28  Aligned_cols=84  Identities=17%  Similarity=0.218  Sum_probs=70.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||.|.++  .||++..  .+..+++|.+....  .......+.+++..+..++|+|++++++.+......++
T Consensus         2 ~~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08229           2 ANFRIEKKIGRGQFS--EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI   79 (267)
T ss_pred             chhhhhhhhcccCCe--EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEE
Confidence            467778899999999  9999987  67788999776432  12234678889999999999999999999998899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++++|
T Consensus        80 v~e~~~~~~L   89 (267)
T cd08229          80 VLELADAGDL   89 (267)
T ss_pred             EEEecCCCCH
Confidence            9999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=9e-10  Score=79.90  Aligned_cols=85  Identities=14%  Similarity=0.075  Sum_probs=73.8

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .+-|.+.+.||.|.-|  .|..+..  +|+.+++|.+..+.  +......+-+|+.+|+-+.|||++.+++++.....+|
T Consensus        11 iGpwkLgkTLG~Gstg--~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ly   88 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTG--CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLY   88 (786)
T ss_pred             ccceeccccccCCCCc--eehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEE
Confidence            3458889999999999  9998887  89999999998763  2233456788999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +|.||+++|.|
T Consensus        89 lvlEyv~gGEL   99 (786)
T KOG0588|consen   89 LVLEYVPGGEL   99 (786)
T ss_pred             EEEEecCCchh
Confidence            99999999976

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.98  E-value=5.4e-10  Score=79.34  Aligned_cols=85  Identities=18%  Similarity=0.225  Sum_probs=72.9

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      +...|....+||+|.-|  .||.+..  .+..+++|.+.... .....-+.+|+.+|+..+|+|++.++..+...+.+++
T Consensus       271 P~~~y~~~~kigqgaSG--~vy~A~~~~~~~~VaiK~m~l~~-Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWV  347 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATG--GVYVARKISTKQEVAIKRMDLRK-QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWV  347 (550)
T ss_pred             hhhhhcchhhhcccccc--ceeeeeeccCCceEEEEEEEecc-CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEE
Confidence            34557778999999999  9999988  67789999988664 3335567899999999999999999999998899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       348 VMEym~ggsL  357 (550)
T KOG0578|consen  348 VMEYMEGGSL  357 (550)
T ss_pred             EEeecCCCch
Confidence            9999999986

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.98  E-value=4.7e-09  Score=69.10  Aligned_cols=83  Identities=17%  Similarity=0.207  Sum_probs=69.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      +|...+.||+|.++  .||.+..  ++..+++|.+......     .....+..++..++.++|+|++++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   78 (268)
T cd06630           1 EWLKGQQLGTGAFS--SCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHF   78 (268)
T ss_pred             CccccceecCcCce--EEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeE
Confidence            46777899999999  9999987  6788999988643211     1246788899999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+++++|
T Consensus        79 ~~v~e~~~~~~L   90 (268)
T cd06630          79 NLFVEWMAGGSV   90 (268)
T ss_pred             EEEEeccCCCcH
Confidence            999999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.98  E-value=4.2e-09  Score=70.65  Aligned_cols=83  Identities=18%  Similarity=0.194  Sum_probs=70.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.++  .||++..  .+..+++|.+.... ......+..++..++.++|+|++++.+.+...+..++|+
T Consensus        19 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          19 KKYTRFEKIGQGASG--TVYTAIDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             hhceeeeEecCCCCe--EEEEEEEcCCCCEEEEEEecccc-chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence            468888999999999  9999987  67788999876443 233566788888999999999999999999889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        96 e~~~~~~L  103 (293)
T cd06647          96 EYLAGGSL  103 (293)
T ss_pred             ecCCCCcH
Confidence            99998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.98  E-value=9.5e-09  Score=67.18  Aligned_cols=82  Identities=16%  Similarity=0.229  Sum_probs=68.5

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC----ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL----PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      |...+.||+|.++  .||++..  .+..+++|.+....    .......+..++..++.++|++++++.+.+......++
T Consensus         2 ~~~~~~ig~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   79 (258)
T cd06632           2 WRKGELLGSGSFG--SVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYI   79 (258)
T ss_pred             ccccceeeecCCc--eEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEE
Confidence            5667889999999  9999988  67889999876532    11234678889999999999999999999988899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||+++++|
T Consensus        80 v~e~~~~~~L   89 (258)
T cd06632          80 FLELVPGGSL   89 (258)
T ss_pred             EEEecCCCcH
Confidence            9999998764

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.98  E-value=6.8e-09  Score=68.69  Aligned_cols=77  Identities=22%  Similarity=0.204  Sum_probs=61.7

Q ss_pred             eeecCCCccceEEEEEe-C---CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCC
Q 045247           43 VIKQCDFYITKLYKGFW-Q---ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~-~---~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      .||+|.||  .||++.. .   ...+++|.+...........+.+++..+..++|+|++++++.+......+++|||+++
T Consensus         2 ~lg~G~~g--~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (268)
T cd05086           2 EIGNGWFG--KVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL   79 (268)
T ss_pred             cCCCCcCc--eEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence            58999999  9999875 2   2345666665443223456788888899999999999999999988999999999998


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |+|
T Consensus        80 ~~L   82 (268)
T cd05086          80 GDL   82 (268)
T ss_pred             CcH
Confidence            875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.98  E-value=5.9e-09  Score=68.16  Aligned_cols=83  Identities=17%  Similarity=0.194  Sum_probs=69.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||+|.++  .+|++..  .+..+++|.+.... .......+..++..++.++|+|++++.+.+...+..++||
T Consensus         1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08220           1 KYEKIRVVGRGAFG--IVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM   78 (256)
T ss_pred             CceEEEEecccCce--EEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence            36677899999999  9999888  67788999887543 1234567888999999999999999999998889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        79 e~~~~~~L   86 (256)
T cd08220          79 EYAPGGTL   86 (256)
T ss_pred             ecCCCCCH
Confidence            99998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.98  E-value=6.9e-09  Score=69.36  Aligned_cols=82  Identities=10%  Similarity=0.091  Sum_probs=67.2

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      |...+.||+|.||  .||.+..  ++..+++|.+.....  ......+..|+.++..++|++++.+.+.+...+..+++|
T Consensus         2 f~~~~~ig~G~~g--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05630           2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             ceeeEEeecCCCe--EEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence            4556789999999  9999988  678899998865321  112345677889999999999999999998889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        80 e~~~g~~L   87 (285)
T cd05630          80 TLMNGGDL   87 (285)
T ss_pred             EecCCCcH
Confidence            99998875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.98  E-value=4.3e-09  Score=70.15  Aligned_cols=76  Identities=13%  Similarity=0.066  Sum_probs=62.7

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCC
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      ||+|.||  .||.+..  .+..+++|.+.....  ......+..|+.++..++|++++++.+.+......+++|||+++|
T Consensus         1 lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g   78 (280)
T cd05608           1 LGKGGFG--EVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGG   78 (280)
T ss_pred             CCCCCce--eEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence            5889999  9999988  678899998865421  112345677889999999999999999998888999999999998


Q ss_pred             CC
Q 045247          120 TL  121 (121)
Q Consensus       120 ~L  121 (121)
                      +|
T Consensus        79 ~L   80 (280)
T cd05608          79 DL   80 (280)
T ss_pred             CH
Confidence            75

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.97  E-value=1.1e-08  Score=68.44  Aligned_cols=85  Identities=16%  Similarity=0.224  Sum_probs=69.8

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--C----------------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--Q----------------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHI   96 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~----------------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~   96 (121)
                      ...|...+.||+|.||  .||.+..  .                +..+++|.+...........+..++..+..++|+|+
T Consensus         4 ~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i   81 (296)
T cd05051           4 RQPLNFVEKLGEGQFG--EVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNI   81 (296)
T ss_pred             hhhCcccccccCCCCc--cEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCE
Confidence            3468888999999999  9998876  1                134788887765433446678889999999999999


Q ss_pred             ceeeeEEecCCccEEEEeccCCCCC
Q 045247           97 LKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        97 ~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +++.+.+......++++||+++++|
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L  106 (296)
T cd05051          82 ARLLGVCTVDPPLCMIMEYMENGDL  106 (296)
T ss_pred             eEEEEEEecCCCcEEEEecCCCCCH
Confidence            9999999988999999999998764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.97  E-value=4.2e-09  Score=71.42  Aligned_cols=78  Identities=15%  Similarity=0.067  Sum_probs=63.4

Q ss_pred             CeeecCCCccceEEEEEe-----CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           42 EVIKQCDFYITKLYKGFW-----QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      +.||+|.||  .||++..     .+..+++|.+..... .........|+..+..++|+|++++.+.+......++||||
T Consensus         2 ~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   79 (318)
T cd05582           2 KVLGQGSFG--KVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF   79 (318)
T ss_pred             ceeeeCCCE--EEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence            578999999  9998765     467899998875321 12234567788899999999999999999999999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++|+|
T Consensus        80 ~~~~~L   85 (318)
T cd05582          80 LRGGDL   85 (318)
T ss_pred             CCCCcH
Confidence            998864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.97  E-value=5e-09  Score=69.98  Aligned_cols=87  Identities=15%  Similarity=0.250  Sum_probs=70.1

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--C-----CeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEe
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--Q-----ERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCL  104 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~  104 (121)
                      ...++|...+.||+|.++  .||++..  .     ...+++|.+...........+..++..+..+ +|+|++++.+.+.
T Consensus         9 ~~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFG--QVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cCHhHeEEeeEecccccc--cEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            344568888999999999  9999986  2     2568888887543233456688899989888 7999999999998


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....+++|||+++|+|
T Consensus        87 ~~~~~~li~e~~~~~~L  103 (293)
T cd05053          87 QEGPLYVVVEYAAHGNL  103 (293)
T ss_pred             CCCCeEEEEEeCCCCcH
Confidence            88899999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.97  E-value=4e-09  Score=70.12  Aligned_cols=76  Identities=21%  Similarity=0.253  Sum_probs=60.1

Q ss_pred             eeecCCCccceEEEEEe--C------------------------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCc
Q 045247           43 VIKQCDFYITKLYKGFW--Q------------------------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHI   96 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~--~------------------------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~   96 (121)
                      .||+|.|+  .||++..  .                        ...+++|.+.... ......+..+..+++.++|+|+
T Consensus         2 ~lG~G~~~--~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           2 HLGQGTRT--NIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-RDIALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             CcCccccc--ceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-HHHHHHHHHHHHHHhcCCCCCe
Confidence            58999999  9999864  1                        1246777765432 2234567778888999999999


Q ss_pred             ceeeeEEecCCccEEEEeccCCCCC
Q 045247           97 LKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        97 ~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +++++++......++||||+++|+|
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L  103 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPL  103 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcH
Confidence            9999999998999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.97  E-value=1.8e-09  Score=70.82  Aligned_cols=83  Identities=12%  Similarity=0.108  Sum_probs=70.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+....  .......+.+++..++.++|+|++++.+.+......+++
T Consensus         1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   78 (258)
T cd05578           1 HFELLRVIGKGAFG--KVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLV   78 (258)
T ss_pred             CceEEEEeccCCCc--eEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEE
Confidence            46777899999999  9999988  57889999887532  113356788899999999999999999999888999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      +||+++++|
T Consensus        79 ~e~~~~~~L   87 (258)
T cd05578          79 VDLLLGGDL   87 (258)
T ss_pred             EeCCCCCCH
Confidence            999998865

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.97  E-value=5.1e-09  Score=70.37  Aligned_cols=82  Identities=16%  Similarity=0.203  Sum_probs=70.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+.... ......+..++..++.++|+|++++++.+...+..++++|
T Consensus        20 ~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          20 KYTRYEKIGQGASG--TVFTAIDVATGQEVAIKQINLQK-QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             eEEEEEEEecCCCe--EEEEEEEcCCCcEEEEEEEeccc-CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            57788899999999  9999987  67889999886543 2345667888999999999999999999998899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        97 ~~~~~~L  103 (296)
T cd06655          97 YLAGGSL  103 (296)
T ss_pred             ecCCCcH
Confidence            9998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.96  E-value=1.1e-08  Score=67.18  Aligned_cols=82  Identities=18%  Similarity=0.223  Sum_probs=70.2

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||+|.++  .+|++..  .+..+++|.+...... .....+..++..++.++|++++++++.....+..++++|
T Consensus         2 y~~~~~lg~G~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           2 WQRGNKIGGGTFG--KVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             ceeeeEeecCCCc--EEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence            6777899999999  9999987  6778999988765421 246778899999999999999999999988899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~L   86 (264)
T cd06626          80 YCSGGTL   86 (264)
T ss_pred             cCCCCcH
Confidence            9998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.96  E-value=7.4e-09  Score=67.82  Aligned_cols=82  Identities=17%  Similarity=0.117  Sum_probs=68.7

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||+|.|+  .+|.+..  .+..+++|.+.... .......+..++..++.++|+|++++.+.+...+..++++|
T Consensus         2 y~~~~~lg~g~~g--~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           2 YVKVKKIGEGSFG--KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             ceEEEEeccCCce--EEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence            6677899999999  9999887  67789999886432 12345678889999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~l   86 (256)
T cd08218          80 YCEGGDL   86 (256)
T ss_pred             cCCCCcH
Confidence            9998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.96  E-value=6.9e-09  Score=70.82  Aligned_cols=78  Identities=19%  Similarity=0.224  Sum_probs=62.9

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.+....  .......+..+...+..+ +|+|++++++++......++||||+
T Consensus         1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~   78 (329)
T cd05618           1 RVIGRGSYA--KVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV   78 (329)
T ss_pred             CeeeeCCCe--EEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCC
Confidence            368999999  9999988  67789999887532  122345566777777665 6999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~~~L   83 (329)
T cd05618          79 NGGDL   83 (329)
T ss_pred             CCCCH
Confidence            99875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.96  E-value=4.1e-09  Score=69.27  Aligned_cols=83  Identities=10%  Similarity=0.109  Sum_probs=70.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+...........+.+++..++.++|+|++++.+.+......++++|
T Consensus         2 ~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (265)
T cd06605           2 DLEYLGELGAGNSG--VVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME   79 (265)
T ss_pred             cchHHHHhcCCCCe--EEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence            46667889999999  9999988  5788999988766433445678889999999999999999999988899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~L   86 (265)
T cd06605          80 YMDGGSL   86 (265)
T ss_pred             ecCCCcH
Confidence            9997764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.96  E-value=5.5e-09  Score=68.73  Aligned_cols=83  Identities=8%  Similarity=0.144  Sum_probs=68.8

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ....|...+.||+|.++  .||.+.. .+..+++|.+...  ......+..|+.+++.++|++++++.+.+.. ...+++
T Consensus         4 ~~~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v   78 (260)
T cd05073           4 PRESLKLEKKLGAGQFG--EVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII   78 (260)
T ss_pred             cccceeEEeEecCccce--EEEEEEecCCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence            34578888999999999  9999987 5666888887654  2345678889999999999999999988877 778999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        79 ~e~~~~~~L   87 (260)
T cd05073          79 TEFMAKGSL   87 (260)
T ss_pred             EEeCCCCcH
Confidence            999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.96  E-value=5.8e-09  Score=68.48  Aligned_cols=81  Identities=16%  Similarity=0.206  Sum_probs=67.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      +|...+.||+|.++  .||.+.+ .+..+++|.+....  .....+..++..+..++|+|++++.+.+......+++|||
T Consensus         5 ~~~~~~~lg~G~~~--~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05059           5 ELTFLKELGSGQFG--VVHLGKWRGKIDVAIKMIREGA--MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY   80 (256)
T ss_pred             HcchhhhhccCCCc--eEEEeEecCCccEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence            46777889999999  9999988 55678888876542  2334577889999999999999999999888899999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        81 ~~~~~L   86 (256)
T cd05059          81 MANGCL   86 (256)
T ss_pred             CCCCCH
Confidence            998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.96  E-value=6.2e-09  Score=69.53  Aligned_cols=83  Identities=19%  Similarity=0.253  Sum_probs=68.4

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++++|...+.||+|.++  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++.+.+......++
T Consensus         3 ~~~~y~~~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l   80 (291)
T cd07870           3 AATSYLNLEKLGEGSYA--TVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF   80 (291)
T ss_pred             ccceeEEEEEEEecCCE--EEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence            34678889999999999  9999987  6788999988654312223456778889999999999999999998889999


Q ss_pred             EEeccCC
Q 045247          112 VFEYGEY  118 (121)
Q Consensus       112 v~e~~~~  118 (121)
                      ++||+.+
T Consensus        81 v~e~~~~   87 (291)
T cd07870          81 VFEYMHT   87 (291)
T ss_pred             EEecccC
Confidence            9999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.95  E-value=6.7e-09  Score=69.79  Aligned_cols=81  Identities=17%  Similarity=0.265  Sum_probs=67.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||.|.++  .||++..  .+..+++|.+...........+..++..+..++|+|++++++.+......+++|
T Consensus         6 ~~y~~~~~lg~g~~g--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~   83 (301)
T cd07873           6 ETYIKLDKLGEGTYA--TVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   83 (301)
T ss_pred             cceEEeeEeccCcCE--EEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence            467888999999999  9999988  678899998865432223445678899999999999999999999989999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+++
T Consensus        84 e~~~~   88 (301)
T cd07873          84 EYLDK   88 (301)
T ss_pred             ecccc
Confidence            99874

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.95  E-value=1.1e-08  Score=68.15  Aligned_cols=83  Identities=16%  Similarity=0.128  Sum_probs=67.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--Cc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--PI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~  108 (121)
                      .|...+.||+|.|+  .||.+.+      .+..+++|.+...........+.+++..++.+.|+|++++.+++...  ..
T Consensus         5 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           5 FLKRIRDLGEGHFG--KVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhceecCCCCce--eEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            46777899999999  9999874      35678999887553233456788999999999999999999988764  56


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .+++|||+++++|
T Consensus        83 ~~lv~e~~~g~~L   95 (284)
T cd05079          83 IKLIMEFLPSGSL   95 (284)
T ss_pred             eEEEEEccCCCCH
Confidence            8999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.95  E-value=9.2e-09  Score=68.33  Aligned_cols=80  Identities=19%  Similarity=0.334  Sum_probs=67.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+...........+..|+..+..++|+|++++.+.+...+..+++||
T Consensus         1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (284)
T cd07836           1 NFKQLEKLGEGTYA--TVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE   78 (284)
T ss_pred             CceEeeeeccCCce--EEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence            46778899999999  9999998  6788999988754322234556778899999999999999999999999999999


Q ss_pred             ccCC
Q 045247          115 YGEY  118 (121)
Q Consensus       115 ~~~~  118 (121)
                      |+++
T Consensus        79 ~~~~   82 (284)
T cd07836          79 YMDK   82 (284)
T ss_pred             cCCc
Confidence            9985

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.95  E-value=5.8e-09  Score=69.62  Aligned_cols=81  Identities=17%  Similarity=0.263  Sum_probs=67.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||.|.++  .||++..  .+..+++|.+...........+.+|+..++.++|+|++++.+.+...+..++||
T Consensus         5 ~~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (291)
T cd07844           5 ETYKKLDKLGEGSYA--TVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF   82 (291)
T ss_pred             cceeEEEEEeecCCe--EEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence            467888999999999  9999988  678899998865431122344667899999999999999999999999999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+.+
T Consensus        83 e~~~~   87 (291)
T cd07844          83 EYLDT   87 (291)
T ss_pred             ecCCC
Confidence            99974

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.94  E-value=5.5e-09  Score=69.79  Aligned_cols=92  Identities=18%  Similarity=0.183  Sum_probs=72.7

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeE
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGC  102 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~  102 (121)
                      +..+++..++++|...+.||+|.++  .||++..  .+..+++|.+....  .....+..++..+..+ +|+|++++++.
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~--~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~   87 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYG--KVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGM   87 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCe--EEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence            4455666678889999999999999  9999988  67788999886542  2334566777778887 69999999998


Q ss_pred             EecC-----CccEEEEeccCCCCC
Q 045247          103 CLET-----PIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~~-----~~~~lv~e~~~~g~L  121 (121)
                      +...     ...++++||+++|+|
T Consensus        88 ~~~~~~~~~~~~~lv~ey~~~~sL  111 (291)
T cd06639          88 FYKADKLVGGQLWLVLELCNGGSV  111 (291)
T ss_pred             EEeccccCCCeeEEEEEECCCCcH
Confidence            8643     358999999998864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.94  E-value=1.5e-09  Score=75.82  Aligned_cols=84  Identities=17%  Similarity=0.177  Sum_probs=69.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc-cEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI-PIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~-~~l  111 (121)
                      ++|...+.+|.|.||  .++....  .+..+++|.+..... ........+|+.+++++.|||++...+.+..... .++
T Consensus         4 ~~Ye~~~~iG~GafG--~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFG--SALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             chhhhhhhcCccccc--hhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence            467888999999999  7665544  566789999886542 2334567889999999999999999999988887 999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||+|++||++
T Consensus        82 vm~Y~eGg~l   91 (426)
T KOG0589|consen   82 VMEYCEGGDL   91 (426)
T ss_pred             EEeecCCCCH
Confidence            9999999975

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.94  E-value=1.3e-08  Score=67.61  Aligned_cols=83  Identities=22%  Similarity=0.415  Sum_probs=67.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CC----eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QE----RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ..|...+.||+|.|+  .||++.+  .+    ..+++|.+...........+.+++..+..+.|+|++++++++.. ...
T Consensus         7 ~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   83 (279)
T cd05057           7 TELEKIKVLGSGAFG--TVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV   83 (279)
T ss_pred             HHcEEcceecCCCCc--cEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence            357778899999999  9999987  33    25788877665433345678889999999999999999999877 789


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+++|+|
T Consensus        84 ~~v~e~~~~g~L   95 (279)
T cd05057          84 QLITQLMPLGCL   95 (279)
T ss_pred             EEEEecCCCCcH
Confidence            999999998875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.94  E-value=6.7e-09  Score=68.98  Aligned_cols=82  Identities=22%  Similarity=0.316  Sum_probs=67.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|.....||+|.++  .||++..  .+..+++|.+..... ......+..++..++.+.|+|++++++.+......+++|
T Consensus         2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   79 (286)
T cd07847           2 KYEKLSKIGEGSYG--VVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF   79 (286)
T ss_pred             ceeeeeeecccCCe--EEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence            57778899999999  9999988  578899998764321 122345778899999999999999999999989999999


Q ss_pred             eccCCCC
Q 045247          114 EYGEYRT  120 (121)
Q Consensus       114 e~~~~g~  120 (121)
                      ||++++.
T Consensus        80 e~~~~~~   86 (286)
T cd07847          80 EYCDHTV   86 (286)
T ss_pred             eccCccH
Confidence            9998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.94  E-value=8e-09  Score=76.69  Aligned_cols=84  Identities=17%  Similarity=0.071  Sum_probs=70.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||.|.|+  .||++..  .+..+++|.+....  .......+..++..+..++|+++++++..+......++
T Consensus         4 ~~y~i~~~LG~G~fg--~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           4 EEFVIVKPISRGAFG--KVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             CCEEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence            468888999999999  9999998  67889999987542  12224667788888999999999999999988899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++++|
T Consensus        82 VmEy~~g~~L   91 (669)
T cd05610          82 VMEYLIGGDV   91 (669)
T ss_pred             EEeCCCCCCH
Confidence            9999998865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.94  E-value=1.5e-08  Score=66.13  Aligned_cols=78  Identities=27%  Similarity=0.406  Sum_probs=66.5

Q ss_pred             CeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCCC
Q 045247           42 EVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRT  120 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g~  120 (121)
                      +.||+|.++  .||++.. .+..+++|.+...........+..++..++.+.|++++++.+.+......+++|||+++++
T Consensus         1 ~~lg~g~~g--~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFG--DVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCc--eEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            368999999  9999998 6788999988765433345678889999999999999999999999999999999998876


Q ss_pred             C
Q 045247          121 L  121 (121)
Q Consensus       121 L  121 (121)
                      |
T Consensus        79 l   79 (251)
T cd05041          79 L   79 (251)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.94  E-value=1.1e-08  Score=68.02  Aligned_cols=85  Identities=14%  Similarity=0.364  Sum_probs=69.3

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-C-----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec-CC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-Q-----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE-TP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-~~  107 (121)
                      .++|...+.||+|.|+  .||++.. .     +..+++|.+...........+..++..+..+.|+|++++++.+.. ..
T Consensus         5 ~~~~~~~~~i~~g~~g--~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~   82 (280)
T cd05043           5 RDRVTLSDLLQEGTFG--RIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE   82 (280)
T ss_pred             hhheEEeeeecccCCc--eEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence            4578888999999999  9999988 4     567888887654333446778889999999999999999998765 57


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..+++++|.++|+|
T Consensus        83 ~~~~~~~~~~~~~L   96 (280)
T cd05043          83 PPFVLYPYMNWGNL   96 (280)
T ss_pred             CCEEEEEcCCCCcH
Confidence            78999999988764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.93  E-value=1.4e-08  Score=66.93  Aligned_cols=84  Identities=14%  Similarity=0.168  Sum_probs=67.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC----ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL----PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--P  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~  107 (121)
                      .+|...+.||+|.++  .||.+..  ++..+++|.+....    .......+..|+..+..++|++++++.+++...  .
T Consensus         2 ~~~~~~~~l~~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   79 (265)
T cd06652           2 TNWRLGKLLGQGAFG--RVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMER   79 (265)
T ss_pred             CcceEeeEEecCCce--EEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCc
Confidence            468888999999999  9999988  67889999875321    112346778899999999999999999988653  4


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      .++++|||+++++|
T Consensus        80 ~~~~v~e~~~~~~L   93 (265)
T cd06652          80 TLSIFMEHMPGGSI   93 (265)
T ss_pred             eEEEEEEecCCCcH
Confidence            57899999998865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.93  E-value=1.1e-08  Score=68.41  Aligned_cols=82  Identities=9%  Similarity=0.087  Sum_probs=66.7

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      |...+.||+|.||  .||.+..  .+..+++|.+......  .....+..|+.++..++|++++.+.+.+...+..+++|
T Consensus         2 ~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05632           2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL   79 (285)
T ss_pred             ceEEEEEecCCCe--EEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence            4556789999999  9999988  6788999988654211  12344677899999999999999999998889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        80 e~~~~~~L   87 (285)
T cd05632          80 TIMNGGDL   87 (285)
T ss_pred             EeccCccH
Confidence            99998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.93  E-value=9.7e-09  Score=67.26  Aligned_cols=82  Identities=22%  Similarity=0.380  Sum_probs=68.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      .+|...+.||+|.+|  .||++.+ .+..+++|.+....  .....+..++..++.+.|++++++++.+......++++|
T Consensus         4 ~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd05112           4 SELTLVQEIGSGQFG--LVWLGYWLEKRKVAIKTIREGA--MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE   79 (256)
T ss_pred             hHeEEEeeecCcccc--eEEEEEEeCCCeEEEEECCCCC--CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence            356777899999999  9999988 67778899876543  224567889999999999999999999988889999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~L   86 (256)
T cd05112          80 FMEHGCL   86 (256)
T ss_pred             cCCCCcH
Confidence            9998764

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.93  E-value=1.5e-08  Score=67.46  Aligned_cols=82  Identities=20%  Similarity=0.252  Sum_probs=66.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CCc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TPI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~~  108 (121)
                      +|...+.||+|.||  .||.+.+      .+..+++|.+.... ......+..++..+..++|+|++++.+.+..  ...
T Consensus         5 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           5 HLKFIQQLGKGNFG--SVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             cceeeeeccCCCCc--eEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence            57778899999999  9999864      46678999887653 3445678899999999999999999987754  346


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++++||+++|+|
T Consensus        82 ~~lv~e~~~~~~L   94 (284)
T cd05081          82 LRLVMEYLPYGSL   94 (284)
T ss_pred             eEEEEEecCCCCH
Confidence            8899999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.93  E-value=4.9e-09  Score=68.58  Aligned_cols=83  Identities=20%  Similarity=0.264  Sum_probs=68.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+.... .......+..|+..++.++|+|++++++.+......++++
T Consensus         1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   78 (257)
T cd08225           1 RYEIIKKIGEGSFG--KIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVM   78 (257)
T ss_pred             CceEEEEecCCCcc--eEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEE
Confidence            36677889999999  9999998  57788999886532 1123456778999999999999999999999989999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        79 e~~~~~~L   86 (257)
T cd08225          79 EYCDGGDL   86 (257)
T ss_pred             ecCCCCcH
Confidence            99988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.92  E-value=7.8e-09  Score=70.32  Aligned_cols=78  Identities=13%  Similarity=0.112  Sum_probs=63.5

Q ss_pred             CeeecCCCccceEEEEEe-----CCeEEEEEEecCCC---ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           42 EVIKQCDFYITKLYKGFW-----QERLISVLKFDESL---PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.||+|.||  .||.+..     .+..+++|.+....   .......+..|+..+..++|+|++++++.+......+++|
T Consensus         2 ~~lg~G~~g--~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   79 (323)
T cd05584           2 KVLGKGGYG--KVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLIL   79 (323)
T ss_pred             ceeeecCCe--EEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEE
Confidence            579999999  9999875     35678999886531   0122345678889999999999999999999989999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        80 e~~~~~~L   87 (323)
T cd05584          80 EYLSGGEL   87 (323)
T ss_pred             eCCCCchH
Confidence            99998864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.92  E-value=5.3e-09  Score=68.97  Aligned_cols=82  Identities=12%  Similarity=0.176  Sum_probs=66.7

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ...|...+.||+|.++  .||++.+ ....+++|.+....  .....+..|+..+..++|+|++++.+.+. ....+++|
T Consensus         5 ~~~~~~~~~lg~g~~~--~v~~~~~~~~~~valK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~   79 (262)
T cd05071           5 RESLRLEVKLGQGCFG--EVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT   79 (262)
T ss_pred             hHHeeEeeecCCCCCC--cEEEEEecCCceEEEEecccCc--cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence            3468888999999999  9999988 55568899887542  23456788999999999999999988764 46689999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        80 e~~~~~~L   87 (262)
T cd05071          80 EYMSKGSL   87 (262)
T ss_pred             EcCCCCcH
Confidence            99998875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.92  E-value=6.8e-09  Score=79.28  Aligned_cols=87  Identities=13%  Similarity=0.153  Sum_probs=71.1

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CC
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TP  107 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~  107 (121)
                      ...+.|.....||.|.|+  .||.+..  .+..+++|.+.... .......+..|+.++..+.|+|++++++.+..  ..
T Consensus        10 ~~l~~YeIl~kLG~GgFG--tVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~   87 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFG--EVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ   87 (1021)
T ss_pred             cccCCEEEEEEEecCCCe--EEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence            344679999999999999  9999998  66778888887543 22345678889999999999999999998854  35


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      .+++||||+++|+|
T Consensus        88 ~lyIVMEY~~gGSL  101 (1021)
T PTZ00266         88 KLYILMEFCDAGDL  101 (1021)
T ss_pred             EEEEEEeCCCCCcH
Confidence            68999999999875

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.92  E-value=2e-08  Score=65.57  Aligned_cols=81  Identities=23%  Similarity=0.348  Sum_probs=67.9

Q ss_pred             CcCCeeecCCCccceEEEEEe--CC----eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           39 DEREVIKQCDFYITKLYKGFW--QE----RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        39 ~~~~~ig~g~~~~~~v~~~~~--~~----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ...+.||.|.|+  .||++..  .+    ..+++|.+...........+..++..+..++|++++++++.+......+++
T Consensus         2 ~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i   79 (258)
T smart00219        2 TLGKKLGEGAFG--EVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV   79 (258)
T ss_pred             cccceeccCCCc--ceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence            456789999999  9999988  33    678999987654222567788899999999999999999999988999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        80 ~e~~~~~~l   88 (258)
T smart00219       80 MEYMEGGDL   88 (258)
T ss_pred             EeccCCCCH
Confidence            999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.92  E-value=1.2e-08  Score=68.99  Aligned_cols=83  Identities=14%  Similarity=0.170  Sum_probs=70.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +|...+.||+|.++  .||.+..  .+..+++|.+......  .....+..++..+..+.|++++++++.+......+++
T Consensus         2 ~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   79 (316)
T cd05574           2 HFKKIKLLGKGDVG--RVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV   79 (316)
T ss_pred             ceEEeeeecCCccE--EEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence            57778899999999  9999988  5788999988765322  2346688899999999999999999999988999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+.+++|
T Consensus        80 ~e~~~~~~L   88 (316)
T cd05574          80 MDYCPGGEL   88 (316)
T ss_pred             EEecCCCCH
Confidence            999998765

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.92  E-value=8.3e-09  Score=70.18  Aligned_cols=83  Identities=14%  Similarity=0.157  Sum_probs=65.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCC-CcceeeeEEecCCccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHK-HILKLIGCCLETPIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~-~~~~~~~~~~~~~~~~l  111 (121)
                      +|...+.||+|.||  .||++..  .+..+++|.+....  .......+..+...+..+.|+ +++.+.+++...+..++
T Consensus         1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (324)
T cd05587           1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   78 (324)
T ss_pred             CceEEEEEeeccCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEE
Confidence            46777899999999  9999988  56789999887532  112345567778888888755 57888888888889999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        79 v~E~~~~g~L   88 (324)
T cd05587          79 VMEYVNGGDL   88 (324)
T ss_pred             EEcCCCCCcH
Confidence            9999999875

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.92  E-value=7.2e-10  Score=80.61  Aligned_cols=83  Identities=23%  Similarity=0.333  Sum_probs=68.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC------Cc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET------PI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~------~~  108 (121)
                      .|...+.||+|.||  .||++..  .|..+|+|.++...-.......-.|+.+++++.|+|||++.++-...      ..
T Consensus        14 ~W~~~e~LG~Ga~g--~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~   91 (732)
T KOG4250|consen   14 LWEMDERLGKGAFG--NVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL   91 (732)
T ss_pred             ceeehhhhcCCccc--eeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence            35567889999999  9999996  89999999988754223356778899999999999999998877543      46


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      +.++|||+.+|+|
T Consensus        92 ~vlvmEyC~gGsL  104 (732)
T KOG4250|consen   92 PVLVMEYCSGGSL  104 (732)
T ss_pred             ceEEEeecCCCcH
Confidence            8899999999986

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.92  E-value=1.3e-08  Score=68.05  Aligned_cols=83  Identities=24%  Similarity=0.363  Sum_probs=68.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ++|...+.+|.|.|+  .||.+..       .+..+++|.+.... ......+..++..+..++|++++++.+.+.....
T Consensus         5 ~~~~~~~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (288)
T cd05093           5 HNIVLKRELGEGAFG--KVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   81 (288)
T ss_pred             HHeeeccccCCcCCe--eEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence            467888999999999  9999874       23457788776543 3345678899999999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .+++|||+++++|
T Consensus        82 ~~lv~e~~~~~~L   94 (288)
T cd05093          82 LIMVFEYMKHGDL   94 (288)
T ss_pred             cEEEEEcCCCCCH
Confidence            9999999998764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.92  E-value=1.5e-08  Score=67.99  Aligned_cols=84  Identities=15%  Similarity=0.299  Sum_probs=67.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe--EEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER--LISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~--~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|.||  .||++..  .+.  .+++|.+...........+..++..+..+ +|++++++.+.+......+
T Consensus         2 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~   79 (297)
T cd05089           2 EDIKFEDVIGEGNFG--QVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY   79 (297)
T ss_pred             ccceeeeeecCCCcc--eEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence            467888899999999  9999987  332  36777766432233456788899989888 6999999999998888999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +++||+++|+|
T Consensus        80 lv~e~~~~~~L   90 (297)
T cd05089          80 IAIEYAPYGNL   90 (297)
T ss_pred             EEEEecCCCcH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.91  E-value=2.2e-08  Score=66.07  Aligned_cols=82  Identities=17%  Similarity=0.366  Sum_probs=64.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe--C---CeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc---
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--Q---ERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI---  108 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~---~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~---  108 (121)
                      |...+.||+|.||  .||.+..  .   ...+++|.+.... .......+..++..++.++|+|++++++.+.....   
T Consensus         1 ~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   78 (273)
T cd05035           1 LKLGKILGEGEFG--SVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK   78 (273)
T ss_pred             CccccccCcCCCc--eEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence            4567889999999  9999987  2   2568999887543 12334678889999999999999999998865443   


Q ss_pred             ---cEEEEeccCCCCC
Q 045247          109 ---PILVFEYGEYRTL  121 (121)
Q Consensus       109 ---~~lv~e~~~~g~L  121 (121)
                         .++++||+++|+|
T Consensus        79 ~~~~~~v~e~~~~~~l   94 (273)
T cd05035          79 IPKPMVILPFMKHGDL   94 (273)
T ss_pred             CcccEEEEeccCCCCH
Confidence               7999999998864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.91  E-value=1.2e-08  Score=67.46  Aligned_cols=84  Identities=18%  Similarity=0.340  Sum_probs=68.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      .+|.....||.|.|+  .||.+..       ....+++|.+...........+..|+..+..++|+|++++++.+.....
T Consensus         5 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   82 (275)
T cd05046           5 SNLQEITTLGRGEFG--EVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP   82 (275)
T ss_pred             Hhceeeeeeccccee--EEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence            467888899999999  9999985       1345788877654322235678899999999999999999999988889


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .+++|||+++|+|
T Consensus        83 ~~lv~e~~~~~~L   95 (275)
T cd05046          83 HYMILEYTDLGDL   95 (275)
T ss_pred             ceEEEEecCCCcH
Confidence            9999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.91  E-value=9.2e-09  Score=69.89  Aligned_cols=78  Identities=15%  Similarity=0.196  Sum_probs=61.9

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.+....  .......+..+..++..+ +|++++++.+++......++||||+
T Consensus         1 ~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~   78 (321)
T cd05591           1 KVLGKGSFG--KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV   78 (321)
T ss_pred             CccccCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC
Confidence            368999999  9999988  57789999887532  012234556677777655 6999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~~~L   83 (321)
T cd05591          79 NGGDL   83 (321)
T ss_pred             CCCcH
Confidence            99875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.91  E-value=2.5e-08  Score=65.68  Aligned_cols=82  Identities=16%  Similarity=0.282  Sum_probs=67.2

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh--------HHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS--------VYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~--------~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      |.....||.|.++  .||.+..  .+..+++|.+.......        ....+..++..+..++|++++++.+.+....
T Consensus         2 ~~~~~~ig~g~~~--~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (267)
T cd06628           2 WIKGALIGSGSFG--SVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD   79 (267)
T ss_pred             ccccceeecCCCe--EEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Confidence            5667889999999  9999988  67788999876543111        1245778889999999999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++++||+++++|
T Consensus        80 ~~~lv~e~~~~~~L   93 (267)
T cd06628          80 HLNIFLEYVPGGSV   93 (267)
T ss_pred             ccEEEEEecCCCCH
Confidence            99999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.90  E-value=3.5e-09  Score=70.40  Aligned_cols=82  Identities=22%  Similarity=0.321  Sum_probs=68.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||+|.++  .||++..  .+..+++|.+...... .....+..++..+..++|+|++++.+++......++++
T Consensus         2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   79 (286)
T cd07846           2 KYENLGLVGEGSYG--MVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF   79 (286)
T ss_pred             ceeEeeeeccCCCe--EEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence            57778899999999  9999998  5788999987654311 22456778899999999999999999999989999999


Q ss_pred             eccCCCC
Q 045247          114 EYGEYRT  120 (121)
Q Consensus       114 e~~~~g~  120 (121)
                      ||++++.
T Consensus        80 e~~~~~~   86 (286)
T cd07846          80 EFVDHTV   86 (286)
T ss_pred             ecCCccH
Confidence            9998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.90  E-value=1.5e-08  Score=67.37  Aligned_cols=82  Identities=16%  Similarity=0.113  Sum_probs=68.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||.|.++  .||++.+  .+..+++|.+..... ......+..++..++.++|+|++++++.+......++|+
T Consensus         1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~   78 (286)
T cd07832           1 RYKILGRIGEGAHG--IVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM   78 (286)
T ss_pred             CceEEeecccCCCc--EEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence            36677889999999  9999998  677899998875431 233567888999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+ +++|
T Consensus        79 e~~-~~~L   85 (286)
T cd07832          79 EYM-PSDL   85 (286)
T ss_pred             ccc-CCCH
Confidence            999 7664

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.90  E-value=1.3e-08  Score=69.24  Aligned_cols=83  Identities=14%  Similarity=0.149  Sum_probs=64.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~l  111 (121)
                      +|...+.||+|.||  .||++..  .+..+++|.+.....  .........+...+..+ +|++++.+.+++...+..++
T Consensus         1 df~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05616           1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYF   78 (323)
T ss_pred             CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEE
Confidence            46778899999999  9999988  667899998875321  11223455566666666 48889999999988899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        79 v~E~~~~g~L   88 (323)
T cd05616          79 VMEYVNGGDL   88 (323)
T ss_pred             EEcCCCCCCH
Confidence            9999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.90  E-value=1.2e-08  Score=69.32  Aligned_cols=78  Identities=12%  Similarity=0.161  Sum_probs=61.1

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHh-cCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQ-MDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~-l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.++....  .........+...+.. .+|++++++.+.+......++||||+
T Consensus         1 ~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~   78 (316)
T cd05619           1 KMLGKGSFG--KVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYL   78 (316)
T ss_pred             CeeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCC
Confidence            368999999  9999998  577899998875420  1223344556666665 57999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~g~L   83 (316)
T cd05619          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            99875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=1.5e-08  Score=66.70  Aligned_cols=85  Identities=18%  Similarity=0.168  Sum_probs=69.5

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCC--
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETP--  107 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~--  107 (121)
                      .++++|...+.||.|.++  .+|.+..  .+..+++|.+....  .....+..++..+..+ .|+|++++++++....  
T Consensus         3 ~~~~~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   78 (275)
T cd06608           3 DPTGIFELVEVIGEGTYG--KVYKARHKKTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP   78 (275)
T ss_pred             CchhheeheeeecCCCCe--EEEEEEECCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence            356789999999999999  9999998  56778899887653  3346678888889888 6999999999986544  


Q ss_pred             ----ccEEEEeccCCCCC
Q 045247          108 ----IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ----~~~lv~e~~~~g~L  121 (121)
                          ..+++|||+++++|
T Consensus        79 ~~~~~~~lv~e~~~~~~L   96 (275)
T cd06608          79 GNDDQLWLVMELCGGGSV   96 (275)
T ss_pred             CcceEEEEEEEcCCCCcH
Confidence                48999999998764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.90  E-value=2.5e-08  Score=66.12  Aligned_cols=83  Identities=18%  Similarity=0.182  Sum_probs=67.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CCc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TPI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~~  108 (121)
                      .|...+.||+|.|+  .||++.+      .+..+++|.+...........+..++..++.+.|+|++++.+.+..  ...
T Consensus         5 ~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~   82 (284)
T cd05038           5 HLKFIKQLGEGHFG--KVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS   82 (284)
T ss_pred             hchhheeeccCCCe--eEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence            46667889999999  9999986      2567999988766422245678899999999999999999998876  567


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .+++|||+++++|
T Consensus        83 ~~lv~e~~~~~~l   95 (284)
T cd05038          83 LRLIMEYLPSGSL   95 (284)
T ss_pred             eEEEEecCCCCCH
Confidence            8999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.90  E-value=1.3e-08  Score=69.19  Aligned_cols=78  Identities=13%  Similarity=0.086  Sum_probs=61.0

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHH-HHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIV-YAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~-~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.|+  .||++..  .+..+++|.+.....  ......+..+.. ++..++|+|++++.+.+...+..++||||+
T Consensus         1 ~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (321)
T cd05603           1 KVIGKGSFG--KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYV   78 (321)
T ss_pred             CeeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCC
Confidence            368999999  9999998  678899998865320  112334444443 567889999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~~~L   83 (321)
T cd05603          79 NGGEL   83 (321)
T ss_pred             CCCCH
Confidence            99875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.90  E-value=1.1e-08  Score=69.47  Aligned_cols=78  Identities=18%  Similarity=0.227  Sum_probs=62.4

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||.|.||  .||++..  .+..+++|.+....  .......+..+..++..+ +|+|++++.+++......++||||+
T Consensus         1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   78 (318)
T cd05570           1 KVLGKGSFG--KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV   78 (318)
T ss_pred             CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence            368999999  9999988  57789999887532  112234556677777766 6999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~~~L   83 (318)
T cd05570          79 NGGDL   83 (318)
T ss_pred             CCCCH
Confidence            99875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.90  E-value=2.6e-08  Score=65.55  Aligned_cols=76  Identities=20%  Similarity=0.286  Sum_probs=60.7

Q ss_pred             eeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCC
Q 045247           43 VIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      .||+|.|+  .||.+.+    .+..+++|.+...........+.+|+..++.++|+|++++++.+. .+..++||||+++
T Consensus         2 ~ig~G~~g--~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFG--CVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcc--cEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence            37999999  9999876    244588888875532233566889999999999999999999875 4678999999998


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |+|
T Consensus        79 ~~L   81 (257)
T cd05115          79 GPL   81 (257)
T ss_pred             CCH
Confidence            875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.89  E-value=1.5e-08  Score=68.97  Aligned_cols=78  Identities=14%  Similarity=0.106  Sum_probs=61.2

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHH-HHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIV-YAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~-~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.+.....  ......+..+.. .+..++|+|++++.+.+...+..++||||+
T Consensus         1 ~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~   78 (323)
T cd05575           1 KVIGKGSFG--KVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYV   78 (323)
T ss_pred             CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCC
Confidence            368999999  9999998  688899999875320  112334444444 457789999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~g~L   83 (323)
T cd05575          79 NGGEL   83 (323)
T ss_pred             CCCCH
Confidence            99875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=98.89  E-value=3.9e-09  Score=75.88  Aligned_cols=93  Identities=23%  Similarity=0.372  Sum_probs=79.5

Q ss_pred             cccHHHHHHHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEE
Q 045247           25 IFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCC  103 (121)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~  103 (121)
                      ..+.++|.+....+.....||+|.||  .||+|.|.| .|+||.+....+ ....+.|.+|+..+++-+|.||+=+.|++
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFG--tV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~  457 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFG--TVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC  457 (678)
T ss_pred             CccccccccCHHHhhccceecccccc--ceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh
Confidence            45568888888888999999999999  999999954 378999987653 34588999999999999999999999999


Q ss_pred             ecCCccEEEEeccCCCCC
Q 045247          104 LETPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~~~~~~lv~e~~~~g~L  121 (121)
                      ..+.. .+|..++++-+|
T Consensus       458 ~~p~~-AIiTqwCeGsSL  474 (678)
T KOG0193|consen  458 MNPPL-AIITQWCEGSSL  474 (678)
T ss_pred             cCCce-eeeehhccCchh
Confidence            87666 899999998765

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.89  E-value=1.6e-08  Score=67.30  Aligned_cols=76  Identities=13%  Similarity=0.049  Sum_probs=61.5

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCC
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      ||+|.||  .||++..  .+..+++|.+.....  .........|..++..++|+|++++.+.+......+++|||+++|
T Consensus         1 lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~   78 (277)
T cd05607           1 LGKGGFG--EVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGG   78 (277)
T ss_pred             CCCCCce--EEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCC
Confidence            5899999  9999987  678899998864321  112234456888999999999999999998889999999999988


Q ss_pred             CC
Q 045247          120 TL  121 (121)
Q Consensus       120 ~L  121 (121)
                      +|
T Consensus        79 ~L   80 (277)
T cd05607          79 DL   80 (277)
T ss_pred             CH
Confidence            75

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.89  E-value=1.6e-08  Score=67.21  Aligned_cols=80  Identities=20%  Similarity=0.310  Sum_probs=66.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+..... ......+..++..+..++|+|++++.+.+......++||
T Consensus         1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (285)
T cd07861           1 DYTKIEKIGEGTYG--VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF   78 (285)
T ss_pred             CceEeeEecccCce--EEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence            46677899999999  9999988  678899998865421 122456778899999999999999999999989999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+++
T Consensus        79 e~~~~   83 (285)
T cd07861          79 EFLSM   83 (285)
T ss_pred             ecCCC
Confidence            99874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.89  E-value=2.6e-08  Score=65.89  Aligned_cols=78  Identities=18%  Similarity=0.273  Sum_probs=62.5

Q ss_pred             CeeecCCCccceEEEEEe--CCe--EEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QER--LISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~--~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.++  .||++..  .+.  .+++|.+...........+..|+..+..+ +|+|++++++.+......+++|||+
T Consensus         1 ~~lg~g~~g--~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (270)
T cd05047           1 DVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   78 (270)
T ss_pred             CcCCCCCCc--eEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence            358999999  9999988  333  46777776433233456788899999988 6999999999999889999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~~~L   83 (270)
T cd05047          79 PHGNL   83 (270)
T ss_pred             CCCcH
Confidence            98864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.89  E-value=1.7e-08  Score=68.85  Aligned_cols=78  Identities=18%  Similarity=0.201  Sum_probs=63.3

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.+....  .......+..+..++..+ +|++++.+.+++......++||||+
T Consensus         1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (327)
T cd05617           1 RVIGRGSYA--KVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV   78 (327)
T ss_pred             CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence            368999999  9999988  67789999987542  112245567788877777 5999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~~~L   83 (327)
T cd05617          79 NGGDL   83 (327)
T ss_pred             CCCcH
Confidence            99875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.89  E-value=2.3e-08  Score=69.36  Aligned_cols=90  Identities=13%  Similarity=0.109  Sum_probs=67.5

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCCccceEEEEEe---CCeEEEEEEecCCC----ChhHHHHHHHHHHHHHhcCCCCccee
Q 045247           27 SAKELEIATNNYDEREVIKQCDFYITKLYKGFW---QERLISVLKFDESL----PDSVYKYSINNIVYAAQMDHKHILKL   99 (121)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~---~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~~~~~   99 (121)
                      +.+.+....++|...+.||+|.||  .||++..   .+..+++|.+....    .......+.+|+.++..+.|++++..
T Consensus         9 ~~~~~~~~~~~Y~~~~~IG~G~fg--~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~   86 (365)
T PRK09188          9 PGDQIPALSARFVETAVLKRDVFS--TVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQ   86 (365)
T ss_pred             cccccccccCCceEccEEeecCcE--EEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcE
Confidence            345555666789999999999999  9999977   35667888765321    11234568899999999999998853


Q ss_pred             eeEEecCCccEEEEeccCCCCC
Q 045247          100 IGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       100 ~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +..   ....++||||+++++|
T Consensus        87 l~~---~~~~~LVmE~~~G~~L  105 (365)
T PRK09188         87 LLA---TGKDGLVRGWTEGVPL  105 (365)
T ss_pred             EEE---cCCcEEEEEccCCCCH
Confidence            322   2457999999998875

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.89  E-value=4.1e-08  Score=64.80  Aligned_cols=84  Identities=14%  Similarity=0.212  Sum_probs=67.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC----ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL----PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TP  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~  107 (121)
                      .+|...+.+|+|.++  .||++..  .+..+++|.+....    .......+..|+..++.++|+|++++.+++..  ..
T Consensus         2 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   79 (266)
T cd06651           2 INWRRGKLLGQGAFG--RVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEK   79 (266)
T ss_pred             CCccccceecCCCCE--EEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCC
Confidence            468889999999999  9999987  67788999876432    11234567889999999999999999998765  35


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++++||+++++|
T Consensus        80 ~~~l~~e~~~~~~L   93 (266)
T cd06651          80 TLTIFMEYMPGGSV   93 (266)
T ss_pred             EEEEEEeCCCCCcH
Confidence            67899999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.88  E-value=1.3e-08  Score=69.39  Aligned_cols=84  Identities=14%  Similarity=0.210  Sum_probs=68.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-C--------CeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEec
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-Q--------ERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLE  105 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~--------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~  105 (121)
                      ..|...+.||+|.|+  .||.+.. .        ...+++|.+...........+..|+..+..+ +|+|++++.+.+..
T Consensus        12 ~~~~i~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          12 TRLTLGKPLGEGCFG--QVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             hHeeecceeccccCC--cEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            357888999999999  9999875 1        1357888776543233456788899999998 79999999999988


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      ....++++||+++|+|
T Consensus        90 ~~~~~lv~e~~~~g~L  105 (334)
T cd05100          90 DGPLYVLVEYASKGNL  105 (334)
T ss_pred             CCceEEEEecCCCCcH
Confidence            8899999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.88  E-value=1.8e-08  Score=65.91  Aligned_cols=81  Identities=17%  Similarity=0.224  Sum_probs=70.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||.|.++  .+|++..  .+..+++|.+....   ....+.+++..++.++|+|++++.+.+......++++
T Consensus         3 ~~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~   77 (256)
T cd06612           3 EVFDILEKLGEGSYG--SVYKAIHKETGQVVAIKVVPVEE---DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM   77 (256)
T ss_pred             ccchhhhhhcCCCCe--EEEEEEEcCCCcEEEEEEeecHH---HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence            568888899999999  9999998  46788999886542   2567888999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        78 e~~~~~~L   85 (256)
T cd06612          78 EYCGAGSV   85 (256)
T ss_pred             ecCCCCcH
Confidence            99998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.88  E-value=1.5e-09  Score=73.40  Aligned_cols=84  Identities=12%  Similarity=0.185  Sum_probs=67.1

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhH--HHHHHHHHHHHHhcCCCCcceeeeEEec--
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSV--YKYSINNIVYAAQMDHKHILKLIGCCLE--  105 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~--~~~~~~~~~~l~~l~h~~~~~~~~~~~~--  105 (121)
                      ++..++|...+.|++|.||  .||++.+  ++..+++|+++-.. ...  --..++|+.+|...+|+||+.+..+...  
T Consensus        72 Crsv~efe~lnrI~EGtyG--iVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~  148 (419)
T KOG0663|consen   72 CRSVEEFEKLNRIEEGTYG--VVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSN  148 (419)
T ss_pred             cccHHHHHHHhhcccCcce--eEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence            3455678888999999999  9999999  77889999987542 111  1235788999999999999999887754  


Q ss_pred             CCccEEEEeccCC
Q 045247          106 TPIPILVFEYGEY  118 (121)
Q Consensus       106 ~~~~~lv~e~~~~  118 (121)
                      -+.+|+||||+++
T Consensus       149 ~d~iy~VMe~~Eh  161 (419)
T KOG0663|consen  149 MDKIYIVMEYVEH  161 (419)
T ss_pred             cceeeeeHHHHHh
Confidence            4679999999875

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.88  E-value=1.1e-08  Score=69.54  Aligned_cols=78  Identities=17%  Similarity=0.218  Sum_probs=61.8

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.+....  .......+..+...+..+ +|++++++++++...+..++||||+
T Consensus         1 ~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~   78 (320)
T cd05590           1 RVLGKGSFG--KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFV   78 (320)
T ss_pred             CeeeeCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCC
Confidence            368999999  9999988  67789999886432  012234556677777665 5999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~g~L   83 (320)
T cd05590          79 NGGDL   83 (320)
T ss_pred             CCchH
Confidence            99875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.88  E-value=9.7e-09  Score=67.82  Aligned_cols=84  Identities=15%  Similarity=0.224  Sum_probs=66.6

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecC----
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLET----  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~----  106 (121)
                      +.+.|...+.||+|.++  .||++..  .+..+++|.+....  .....+..++..+..+ +|+|++++.+.+...    
T Consensus         4 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   79 (272)
T cd06637           4 PAGIFELVELVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG   79 (272)
T ss_pred             hhhhhhHHHheeecCCe--EEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence            44567778889999999  9999988  67788999886542  3345677788888887 699999999988642    


Q ss_pred             --CccEEEEeccCCCCC
Q 045247          107 --PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 --~~~~lv~e~~~~g~L  121 (121)
                        ...+++|||+++++|
T Consensus        80 ~~~~~~iv~e~~~~~~L   96 (272)
T cd06637          80 MDDQLWLVMEFCGAGSV   96 (272)
T ss_pred             CCcEEEEEEEcCCCCcH
Confidence              457899999998764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.88  E-value=3.1e-08  Score=65.93  Aligned_cols=83  Identities=20%  Similarity=0.299  Sum_probs=68.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      .++...+.||+|.|+  .||.+..       .+..+++|.+.... ......+..++..+..++|+|++++.+.+.....
T Consensus         5 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (280)
T cd05092           5 RDIVLKWELGEGAFG--KVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP   81 (280)
T ss_pred             HhceeccccCCccCC--eEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence            367788999999999  9998863       34567888776543 3445678899999999999999999999988889


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .+++|||+++|+|
T Consensus        82 ~~lv~e~~~~~~L   94 (280)
T cd05092          82 LLMVFEYMRHGDL   94 (280)
T ss_pred             eEEEEecCCCCCH
Confidence            9999999998764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.88  E-value=1.2e-08  Score=67.00  Aligned_cols=81  Identities=12%  Similarity=0.201  Sum_probs=66.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      ++|...+.||+|.++  .||++.. .+..+++|.+....  .....+.+|+..++.++|++++++++.+. ....+++||
T Consensus         6 ~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e   80 (260)
T cd05070           6 ESLQLIKKLGNGQFG--EVWMGTWNGNTKVAVKTLKPGT--MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE   80 (260)
T ss_pred             HHhhhhheeccccCc--eEEEEEecCCceeEEEEecCCC--CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence            467788899999999  9999987 66678888887543  22356788999999999999999998774 467899999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        81 ~~~~~~L   87 (260)
T cd05070          81 YMSKGSL   87 (260)
T ss_pred             ecCCCcH
Confidence            9998764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.88  E-value=1e-08  Score=69.55  Aligned_cols=84  Identities=14%  Similarity=0.205  Sum_probs=69.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC--ccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP--IPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~--~~~  110 (121)
                      ..+|...+.||+|.||  .|+.+..  ++...++|...... ......+.+|+.+|..++|+++++.+|......  ..+
T Consensus        16 ~~~~~~~~~lG~Gs~G--~V~l~~~~~~g~~~AvK~v~~~~-~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~   92 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFG--SVYLATNKKTGELMAVKSVELED-SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN   92 (313)
T ss_pred             cchhhhhccccCccce--EEEEEEecCCCcceeeeeeeccc-chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence            3467788899999999  9999998  47888999887653 222567889999999999999999999855544  588


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +.|||+++|+|
T Consensus        93 i~mEy~~~GsL  103 (313)
T KOG0198|consen   93 IFMEYAPGGSL  103 (313)
T ss_pred             eeeeccCCCcH
Confidence            99999999986

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.88  E-value=1.8e-08  Score=67.85  Aligned_cols=85  Identities=13%  Similarity=0.225  Sum_probs=68.5

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe---------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEe
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW---------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCL  104 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~  104 (121)
                      ..+|.....||+|.||  .||.+..         .+..+++|.+...........+..|+..+..+ +|+|++++++.+.
T Consensus        14 ~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          14 RDKLTLGKPLGEGCFG--QVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             HHHeeecceeeccCCc--eEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            3467888999999999  9998864         23467888776543233456788899999988 7999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....+++|||+++|+|
T Consensus        92 ~~~~~~lv~e~~~~~~L  108 (304)
T cd05101          92 QDGPLYVIVEYASKGNL  108 (304)
T ss_pred             cCCceEEEEecCCCCcH
Confidence            98999999999998865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.88  E-value=7.4e-09  Score=69.49  Aligned_cols=82  Identities=16%  Similarity=0.106  Sum_probs=68.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      .|.....||+|.++  .||++..  .+..+++|.+.... ......+.+++..+..++|+|++++++.+...+..+++||
T Consensus        23 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e   99 (292)
T cd06658          23 YLDSFIKIGEGSTG--IVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME   99 (292)
T ss_pred             HHhhhhcccCCCCe--EEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence            34445779999999  9999987  67789999886543 3345667888999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus       100 ~~~~~~L  106 (292)
T cd06658         100 FLEGGAL  106 (292)
T ss_pred             CCCCCcH
Confidence            9998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.88  E-value=8.1e-10  Score=79.69  Aligned_cols=79  Identities=18%  Similarity=0.302  Sum_probs=68.3

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      |..+..||-|+||  .||.+.+  +...|++|...-.+  ....++.++.++..|.++.|||.+...||+......||||
T Consensus        28 f~dLrEIGHGSFG--AVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM  105 (948)
T KOG0577|consen   28 FSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM  105 (948)
T ss_pred             HHHHHHhcCCccc--eeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence            5556789999999  9999998  67789999887654  2334788999999999999999999999999999999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      |||-|
T Consensus       106 EYClG  110 (948)
T KOG0577|consen  106 EYCLG  110 (948)
T ss_pred             HHHhc
Confidence            99865

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.87  E-value=2.2e-08  Score=66.20  Aligned_cols=83  Identities=24%  Similarity=0.336  Sum_probs=66.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .+|...+.||+|.+|  .||++.+ .    ...+++|.............+.+++..+..++|+|++++++.+.. ...+
T Consensus         6 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           6 EDITLGRCIGEGQFG--DVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             hhceeeeeeCCccce--eEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence            357788899999999  9999987 2    235788887655433445678889999999999999999988764 5678


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++|||+++|+|
T Consensus        83 lv~e~~~~~~L   93 (270)
T cd05056          83 IVMELAPLGEL   93 (270)
T ss_pred             EEEEcCCCCcH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.87  E-value=8.9e-09  Score=70.57  Aligned_cols=86  Identities=17%  Similarity=0.315  Sum_probs=67.5

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEec
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLE  105 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~  105 (121)
                      +.+.|...+.||.|.||  .||.+..       .+..+++|.++..........+..++..+..+ +|+|++++++.+..
T Consensus         5 ~~~~~~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~   82 (337)
T cd05054           5 PRDRLKLGKPLGRGAFG--KVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK   82 (337)
T ss_pred             CHHHhhhhcccccCcCc--eEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence            34568888999999999  9999864       23578999887543233346677888989888 79999999998764


Q ss_pred             -CCccEEEEeccCCCCC
Q 045247          106 -TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 -~~~~~lv~e~~~~g~L  121 (121)
                       ....++++||+++|+|
T Consensus        83 ~~~~~~~v~ey~~~~~L   99 (337)
T cd05054          83 PGGPLMVIVEYCKFGNL   99 (337)
T ss_pred             CCCCEEEEEecCCCCCH
Confidence             4568899999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.87  E-value=1.9e-08  Score=67.84  Aligned_cols=85  Identities=14%  Similarity=0.191  Sum_probs=68.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-C--------CeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEe
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-Q--------ERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCL  104 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~--------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~  104 (121)
                      .+.|...+.||+|.|+  .||.+.. .        ...+++|.+...........+..++..+..+ +|++++++.+.+.
T Consensus        17 ~~~~~i~~~lg~G~~g--~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (307)
T cd05098          17 RDRLVLGKPLGEGCFG--QVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   94 (307)
T ss_pred             hHHeEEeeeeccCCCe--eEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            3568899999999999  9998875 1        2358888887543223345677888889888 6999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....+++|||+++|+|
T Consensus        95 ~~~~~~lv~e~~~~~~L  111 (307)
T cd05098          95 QDGPLYVIVEYASKGNL  111 (307)
T ss_pred             cCCceEEEEecCCCCcH
Confidence            98999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.87  E-value=1.3e-08  Score=69.27  Aligned_cols=82  Identities=16%  Similarity=0.163  Sum_probs=64.3

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv  112 (121)
                      |.....||+|.||  .||++..  ++..+++|.+.....  ......+..+...+..+. |++++++.+++...+..++|
T Consensus         2 f~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05615           2 FNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV   79 (323)
T ss_pred             ceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence            5667899999999  9999988  678899998875320  122345666777777776 56788888888888899999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~Ey~~~g~L   88 (323)
T cd05615          80 MEYVNGGDL   88 (323)
T ss_pred             EcCCCCCcH
Confidence            999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.87  E-value=1.5e-08  Score=66.64  Aligned_cols=81  Identities=11%  Similarity=0.162  Sum_probs=65.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      ..|...+.||.|.++  .||++.+ .+..+++|.+....  .....+..|+..++.+.|++++++.+.+. ....+++||
T Consensus         6 ~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e   80 (260)
T cd05069           6 ESLRLDVKLGQGCFG--EVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE   80 (260)
T ss_pred             HHeeeeeeecCcCCC--eEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence            457788899999999  9999988 55568888876542  23456788999999999999999988774 467899999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus        81 ~~~~~~L   87 (260)
T cd05069          81 FMGKGSL   87 (260)
T ss_pred             cCCCCCH
Confidence            9998875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.87  E-value=3.8e-09  Score=75.15  Aligned_cols=88  Identities=15%  Similarity=0.154  Sum_probs=73.0

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhH--HHHHHHHHHHHHhc-CCCCcceeeeEEecC
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSV--YKYSINNIVYAAQM-DHKHILKLIGCCLET  106 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~--~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~  106 (121)
                      ....++|...+.||.|.|+  .|+.+..  ++..+++|++.....-.+  .+-+..|-..|..| .||.+++++--+.+.
T Consensus        69 kk~~~DF~Fg~~lGeGSYS--tV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~  146 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYS--TVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE  146 (604)
T ss_pred             cCChhhcchhheeccccce--eEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc
Confidence            4456789999999999999  9999998  788899999876531111  34456677778888 699999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ..+|+|+||+++|+|
T Consensus       147 ~sLYFvLe~A~nGdl  161 (604)
T KOG0592|consen  147 ESLYFVLEYAPNGDL  161 (604)
T ss_pred             cceEEEEEecCCCcH
Confidence            999999999999986

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.86  E-value=2.7e-08  Score=66.33  Aligned_cols=84  Identities=19%  Similarity=0.180  Sum_probs=71.5

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .+.+|.....+++|.++  .+|++..  .+..+++|.+....  .....+..++..+..++|+|++++++.+......++
T Consensus        17 ~~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   92 (286)
T cd06614          17 PRELYKNLEKIGEGASG--EVYKATDRATGKEVAIKKMRLRK--QNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV   92 (286)
T ss_pred             ccccchHhHhccCCCCe--EEEEEEEccCCcEEEEEEEecCc--hhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence            44567777889999999  9999998  57789999887653  245667888999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||+++++|
T Consensus        93 v~e~~~~~~L  102 (286)
T cd06614          93 VMEYMDGGSL  102 (286)
T ss_pred             EEeccCCCcH
Confidence            9999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.86  E-value=2.7e-08  Score=66.53  Aligned_cols=83  Identities=20%  Similarity=0.293  Sum_probs=67.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      .+|.....||+|.++  .||.+..       ....+++|.+.... ......+.+++..+..++|+|++++.+.+.....
T Consensus         5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (291)
T cd05094           5 RDIVLKRELGEGAFG--KVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP   81 (291)
T ss_pred             HHeEEeeeecccCCC--eEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence            357778899999999  9999875       22346777766543 2334678889999999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++++|
T Consensus        82 ~~lv~e~~~~~~L   94 (291)
T cd05094          82 LIMVFEYMKHGDL   94 (291)
T ss_pred             eEEEEecCCCCcH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=98.86  E-value=1.3e-09  Score=78.33  Aligned_cols=75  Identities=19%  Similarity=0.298  Sum_probs=62.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      .+..++.+|.|.-|  .||.|.+.+..|++|..+...        -.++..|+.++|+||+.+.|+|...+...+||||+
T Consensus       125 ~IsELeWlGSGaQG--AVF~Grl~netVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  125 EISELEWLGSGAQG--AVFLGRLHNETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             HhhhhhhhccCccc--ceeeeeccCceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence            34567899999999  999999977888998765432        23567789999999999999998888888999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      +.|.|
T Consensus       195 a~GqL  199 (904)
T KOG4721|consen  195 AQGQL  199 (904)
T ss_pred             ccccH
Confidence            98865

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.86  E-value=1.7e-08  Score=67.60  Aligned_cols=81  Identities=17%  Similarity=0.265  Sum_probs=66.7

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      |...+.||.|.++  .||++..  .+..+++|.+......    .....+..++..+..++|+|++++++.+...+..++
T Consensus         2 y~~~~~lg~g~~~--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   79 (298)
T cd07841           2 YEKGKKLGEGTYA--VVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL   79 (298)
T ss_pred             ceeeeeeeecccc--EEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE
Confidence            5667889999999  9999998  6788999998754311    123556778899999999999999999999889999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+ +|+|
T Consensus        80 v~e~~-~~~L   88 (298)
T cd07841          80 VFEFM-ETDL   88 (298)
T ss_pred             EEccc-CCCH
Confidence            99999 6653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.86  E-value=2.7e-08  Score=67.70  Aligned_cols=78  Identities=14%  Similarity=0.106  Sum_probs=60.9

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHH-HHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIV-YAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~-~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||.+..  .+..+++|.+....  .......+..+.. .++.++|+|++++.+.+...+..+++|||+
T Consensus         1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05604           1 KVIGKGSFG--KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV   78 (325)
T ss_pred             CceeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCC
Confidence            368999999  9999988  67889999886532  0122334444443 467789999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~~~L   83 (325)
T cd05604          79 NGGEL   83 (325)
T ss_pred             CCCCH
Confidence            99875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.86  E-value=8.9e-09  Score=69.24  Aligned_cols=81  Identities=12%  Similarity=0.086  Sum_probs=66.9

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |.....||.|.|+  .||++..  .+..+++|.+.... ......+.+++..+..++|+|++++.+.+...+..++++||
T Consensus        23 ~~~~~~ig~g~~g--~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~   99 (297)
T cd06659          23 LENYIKIGEGSTG--IVCIAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF   99 (297)
T ss_pred             HHhhhhcCCCCce--eEEEEEEcCCCCEEEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence            3344578999999  9999987  67889999886543 23345677888899999999999999999999999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus       100 ~~~~~L  105 (297)
T cd06659         100 LQGGAL  105 (297)
T ss_pred             CCCCCH
Confidence            998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.86  E-value=2.4e-08  Score=69.14  Aligned_cols=80  Identities=10%  Similarity=0.045  Sum_probs=65.8

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC-----c
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP-----I  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~-----~  108 (121)
                      +|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+..+..++|+|++++++.+....     .
T Consensus         1 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   78 (372)
T cd07853           1 DVEPDRPIGYGAFG--VVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEE   78 (372)
T ss_pred             CCcccceeeeCCCE--EEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccce
Confidence            46778899999999  9999987  67889999886542 1223467888999999999999999999987665     7


Q ss_pred             cEEEEeccCC
Q 045247          109 PILVFEYGEY  118 (121)
Q Consensus       109 ~~lv~e~~~~  118 (121)
                      .++++||+.+
T Consensus        79 ~~lv~e~~~~   88 (372)
T cd07853          79 IYVVTELMQS   88 (372)
T ss_pred             EEEEeecccc
Confidence            8999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.85  E-value=2.6e-08  Score=66.23  Aligned_cols=91  Identities=16%  Similarity=0.205  Sum_probs=71.0

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEE
Q 045247           27 SAKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCC  103 (121)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~  103 (121)
                      +..+...+.+.|...+.+|.|.|+  .||++..  .+..+++|......  .....+..++..+..+ +|+|++++.+.+
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   82 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAF   82 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCe--EEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence            344555566788888999999999  9999998  67788999876542  3345567778888887 699999999988


Q ss_pred             ec------CCccEEEEeccCCCCC
Q 045247          104 LE------TPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~------~~~~~lv~e~~~~g~L  121 (121)
                      ..      ....+++|||+++|+|
T Consensus        83 ~~~~~~~~~~~~~iv~e~~~~~~L  106 (282)
T cd06636          83 IKKSPPGHDDQLWLVMEFCGAGSV  106 (282)
T ss_pred             hcccccCCCCEEEEEEEeCCCCcH
Confidence            53      3568999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.85  E-value=4.1e-08  Score=67.70  Aligned_cols=85  Identities=16%  Similarity=0.157  Sum_probs=68.4

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC--
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP--  107 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~--  107 (121)
                      .....|...+.||+|.||  .||.+..  .+..+++|.+.... .......+.+++..+..++|+|++++++.+....  
T Consensus        18 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   95 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQG--IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL   95 (359)
T ss_pred             hhhhceEEEEEeecCCCE--EEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc
Confidence            345689999999999999  9999988  67889999986542 1233566778999999999999999999886433  


Q ss_pred             ----ccEEEEeccCCC
Q 045247          108 ----IPILVFEYGEYR  119 (121)
Q Consensus       108 ----~~~lv~e~~~~g  119 (121)
                          ..+++|||+.++
T Consensus        96 ~~~~~~~lv~e~~~~~  111 (359)
T cd07876          96 EEFQDVYLVMELMDAN  111 (359)
T ss_pred             cccceeEEEEeCCCcC
Confidence                468999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.85  E-value=4.7e-08  Score=65.04  Aligned_cols=82  Identities=20%  Similarity=0.258  Sum_probs=64.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--Ccc
Q 045247           38 YDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--PIP  109 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~~  109 (121)
                      |...+.||+|.||  .||.+.+      .+..+++|.+...........+..|+..++.++|+|++++.+.+...  ...
T Consensus         6 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (283)
T cd05080           6 LKKIRVLGEGHFG--KVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL   83 (283)
T ss_pred             ceeceecccCCCc--EEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence            4777899999999  9987653      45678999887653223456678899999999999999999987653  457


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++|||+++++|
T Consensus        84 ~lv~e~~~~~~l   95 (283)
T cd05080          84 QLIMEYVPLGSL   95 (283)
T ss_pred             EEEecCCCCCCH
Confidence            899999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.85  E-value=4.2e-08  Score=63.93  Aligned_cols=83  Identities=20%  Similarity=0.248  Sum_probs=70.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||.|.++  .+|++..  ++..+++|.+..... ......+..++..++.++|+|++++.+.+......++++
T Consensus         1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~   78 (258)
T cd08215           1 KYEIIKQIGKGSFG--KVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVM   78 (258)
T ss_pred             CceEEeeeccCCCe--EEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEE
Confidence            36677889999999  9999998  578899998876531 234567888999999999999999999998889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        79 e~~~~~~L   86 (258)
T cd08215          79 EYADGGDL   86 (258)
T ss_pred             EecCCCcH
Confidence            99998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.85  E-value=9.4e-09  Score=68.34  Aligned_cols=82  Identities=23%  Similarity=0.294  Sum_probs=68.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||+|.++  .+|++..  .+..+++|.++.... ......+..++..++.+.|+|++++.+.+...+..+++|
T Consensus         2 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~   79 (288)
T cd07833           2 KYEVLGVVGEGAYG--VVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF   79 (288)
T ss_pred             ceeEEEEecccCCe--eEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence            57778899999999  9999988  577899998865421 122467888999999999999999999999989999999


Q ss_pred             eccCCCC
Q 045247          114 EYGEYRT  120 (121)
Q Consensus       114 e~~~~g~  120 (121)
                      ||++++.
T Consensus        80 e~~~~~~   86 (288)
T cd07833          80 EYVERTL   86 (288)
T ss_pred             ecCCCCH
Confidence            9998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.85  E-value=3.7e-08  Score=64.30  Aligned_cols=78  Identities=23%  Similarity=0.368  Sum_probs=65.9

Q ss_pred             CeeecCCCccceEEEEEe--C---CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--Q---ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~---~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||.|.|+  .||++..  .   +..+++|.+...........+..++..+..++|++++++++.+......+++|||+
T Consensus         1 ~~ig~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           1 KKLGEGAFG--EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             CccccCCce--EEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence            368999999  9999998  3   67789998876642223567888999999999999999999999889999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++++|
T Consensus        79 ~~~~L   83 (262)
T cd00192          79 EGGDL   83 (262)
T ss_pred             cCCcH
Confidence            88875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=3.3e-10  Score=79.30  Aligned_cols=79  Identities=16%  Similarity=0.250  Sum_probs=64.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCC-ccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETP-IPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~-~~~lv  112 (121)
                      .|...+.||.|.||  .||++..  .+..+++|........-+..-=++|+..|+++. |+|++++..++.+.+ .+++|
T Consensus        11 RY~~i~klGDGTfG--sV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   11 RYTVIRKLGDGTFG--SVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHhcCCcce--eEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            57778899999999  9999988  778899998876641111222367899999999 999999999998877 89999


Q ss_pred             EeccC
Q 045247          113 FEYGE  117 (121)
Q Consensus       113 ~e~~~  117 (121)
                      ||||.
T Consensus        89 fE~Md   93 (538)
T KOG0661|consen   89 FEFMD   93 (538)
T ss_pred             HHhhh
Confidence            99985

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.85  E-value=2.2e-08  Score=67.76  Aligned_cols=85  Identities=16%  Similarity=0.237  Sum_probs=67.7

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe---------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEe
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW---------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCL  104 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~  104 (121)
                      ..+|...+.||+|.++  .||++..         ....+++|.+...........+..|+..+..+ +|+|++++.+++.
T Consensus        11 ~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   88 (314)
T cd05099          11 RDRLVLGKPLGEGCFG--QVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT   88 (314)
T ss_pred             HHHeeeeeeecCCCcc--cEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence            3467788999999999  9999864         23457888876543233456678889989888 5999999999998


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....+++|||+++|+|
T Consensus        89 ~~~~~~lv~e~~~~g~L  105 (314)
T cd05099          89 QEGPLYVIVEYAAKGNL  105 (314)
T ss_pred             cCCceEEEEecCCCCcH
Confidence            88889999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.85  E-value=3.7e-08  Score=64.76  Aligned_cols=76  Identities=12%  Similarity=0.051  Sum_probs=64.1

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCC
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      ||.|.++  .||++..  .+..+++|.+.....  ......+..++..++.++|+|++++.+.+......++++||++++
T Consensus         1 lg~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (262)
T cd05572           1 LGVGGFG--RVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGG   78 (262)
T ss_pred             CCCCCce--EEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCC
Confidence            5789999  9999998  578899998875431  123467888999999999999999999999999999999999988


Q ss_pred             CC
Q 045247          120 TL  121 (121)
Q Consensus       120 ~L  121 (121)
                      +|
T Consensus        79 ~L   80 (262)
T cd05572          79 EL   80 (262)
T ss_pred             cH
Confidence            75

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.84  E-value=1e-08  Score=67.56  Aligned_cols=77  Identities=21%  Similarity=0.294  Sum_probs=62.3

Q ss_pred             eeecCCCccceEEEEEe--CC------eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           43 VIKQCDFYITKLYKGFW--QE------RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~--~~------~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      .||+|.++  .||.+..  ..      ..+++|.+...........+.+++..++.++|++++++.+.+......+++||
T Consensus         2 ~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (269)
T cd05044           2 FLGSGAFG--EVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME   79 (269)
T ss_pred             ccccccce--eEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence            58999999  9999976  12      45777876544322345678889999999999999999999988889999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~L   86 (269)
T cd05044          80 LMEGGDL   86 (269)
T ss_pred             ccCCCcH
Confidence            9998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.84  E-value=2.3e-08  Score=67.85  Aligned_cols=78  Identities=14%  Similarity=0.161  Sum_probs=59.5

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHh-cCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQ-MDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~-l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.+....  ..........+...+.. .+|++++++++.+......++||||+
T Consensus         1 ~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~   78 (316)
T cd05592           1 KVLGKGSFG--KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL   78 (316)
T ss_pred             CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence            368999999  9999988  67789999887532  01122334445555544 47999999999999889999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~gg~L   83 (316)
T cd05592          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            99875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.84  E-value=6.4e-08  Score=62.75  Aligned_cols=81  Identities=20%  Similarity=0.242  Sum_probs=69.8

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |...+.||.|.++  .+|++..  .+..+++|.+.... ......+.+++..+..+.|++++++.+.+......++++||
T Consensus         2 y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~   78 (253)
T cd05122           2 FEILEKIGKGGFG--EVYKARHKRTGKEVAIKVIKLES-KEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF   78 (253)
T ss_pred             ceeeeeeccCCce--EEEEEEECCCCcEEEEEEecccc-hhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence            6677889999999  9999998  57789999987654 23567788899999999999999999999988999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        79 ~~~~~L   84 (253)
T cd05122          79 CSGGSL   84 (253)
T ss_pred             CCCCcH
Confidence            998764

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.84  E-value=4e-08  Score=64.35  Aligned_cols=83  Identities=16%  Similarity=0.225  Sum_probs=66.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CCccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TPIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~~~~l  111 (121)
                      +|...+.+|.|.++  .||++..  .+..+++|.+.... .......+..++..++.++|+|++++++.+..  ....++
T Consensus         1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~   78 (265)
T cd08217           1 DYEVLETIGKGSFG--TVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI   78 (265)
T ss_pred             CceeeeeeccCCCe--EEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence            36677889999999  9999987  67788888886533 23345678889999999999999999987753  456789


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++++|
T Consensus        79 ~~e~~~~~~L   88 (265)
T cd08217          79 VMEYCEGGDL   88 (265)
T ss_pred             EehhccCCCH
Confidence            9999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.84  E-value=3.8e-08  Score=64.54  Aligned_cols=81  Identities=16%  Similarity=0.219  Sum_probs=67.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe-cCCccEEEEe
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL-ETPIPILVFE  114 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~-~~~~~~lv~e  114 (121)
                      .+|...+.||+|.++  .||++...+..+++|......   ....+..++..++.++|++++++.+.+. .....++++|
T Consensus         6 ~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (256)
T cd05082           6 KELKLLQTIGKGEFG--DVMLGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   80 (256)
T ss_pred             HhCeeeeeecccCCC--eEEEEEEcCCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence            367888999999999  999998777778888876542   3456888999999999999999998764 4567899999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        81 ~~~~~~L   87 (256)
T cd05082          81 YMAKGSL   87 (256)
T ss_pred             CCCCCcH
Confidence            9998865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.83  E-value=2.5e-08  Score=66.99  Aligned_cols=78  Identities=17%  Similarity=0.133  Sum_probs=66.2

Q ss_pred             CCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCC
Q 045247           41 REVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      ...||+|.++  .||++..  .+..+++|.+.... ......+.+++..++.++|+|++++++.+...+..+++|||+++
T Consensus        25 ~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  101 (292)
T cd06657          25 FIKIGEGSTG--IVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  101 (292)
T ss_pred             HHHcCCCCCe--EEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence            3578999999  9999988  67889999876543 23456688899999999999999999999999999999999998


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      ++|
T Consensus       102 ~~L  104 (292)
T cd06657         102 GAL  104 (292)
T ss_pred             CcH
Confidence            764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=6.9e-08  Score=62.91  Aligned_cols=82  Identities=21%  Similarity=0.356  Sum_probs=69.3

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||+|.++  .+|++..  .+..+++|.+..... ......+..++..+..++|++++++.+.+......++++|
T Consensus         2 y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (254)
T cd06627           2 YQLGDLIGRGAFG--VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE   79 (254)
T ss_pred             ceeeeEEcccCCe--EEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence            6677899999999  9999988  677899998876541 1345678899999999999999999999988899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~~~~L   86 (254)
T cd06627          80 YAENGSL   86 (254)
T ss_pred             cCCCCcH
Confidence            9988764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.83  E-value=4.1e-08  Score=65.16  Aligned_cols=80  Identities=9%  Similarity=0.060  Sum_probs=63.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHH-HHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIV-YAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~-~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||.|.||  .||++..  ++..+++|.+...........+..+.. .++..+|+|++++++.+......+++|
T Consensus         2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~   79 (283)
T cd06617           2 DLEVIEELGRGAYG--VVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM   79 (283)
T ss_pred             CceEEEEecccCCe--EEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence            67778899999999  9999998  688899998875432223344444554 456678999999999999889999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+++
T Consensus        80 e~~~~   84 (283)
T cd06617          80 EVMDT   84 (283)
T ss_pred             hhhcc
Confidence            99874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.83  E-value=3.8e-09  Score=77.65  Aligned_cols=78  Identities=17%  Similarity=0.181  Sum_probs=68.7

Q ss_pred             CCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCC
Q 045247           41 REVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      .-++|+|.+|  .||.+.+  +...+++|.+.... ....+.+..|+.+.+.++|+||++.+|++....+.-+.||-++|
T Consensus       580 rvVLGKGTYG--~VYA~RD~~tqvrIaIKEIpekd-sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPG  656 (1226)
T KOG4279|consen  580 RVVLGKGTYG--TVYAARDMDTQVRIAIKEIPEKD-SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPG  656 (1226)
T ss_pred             eEEeecCcee--EEEeeccccceeEEEeeeccccc-chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCC
Confidence            3478999999  9999998  56678999998764 45578888999999999999999999999998899999999999


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |+|
T Consensus       657 GSL  659 (1226)
T KOG4279|consen  657 GSL  659 (1226)
T ss_pred             CcH
Confidence            986

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.83  E-value=5.3e-08  Score=63.91  Aligned_cols=77  Identities=23%  Similarity=0.335  Sum_probs=62.1

Q ss_pred             CeeecCCCccceEEEEEe--CC---eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QE---RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~---~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++.+  ..   ..+++|.+...........+..++..++.+.|++++++++.+. .+..+++|||+
T Consensus         1 ~~ig~G~~g--~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~   77 (257)
T cd05060           1 KELGHGNFG--SVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA   77 (257)
T ss_pred             CccCccCce--eEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence            368999999  9999987  33   5788998876542234567888999999999999999998775 46689999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        78 ~~~~L   82 (257)
T cd05060          78 PLGPL   82 (257)
T ss_pred             CCCcH
Confidence            98875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.83  E-value=3.3e-08  Score=66.11  Aligned_cols=81  Identities=23%  Similarity=0.309  Sum_probs=67.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||.|.++  .||++..  .+..+++|.+..... ......+..++..++.++|+|++++.+.+......++|
T Consensus         2 ~~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   79 (294)
T PLN00009          2 DQYEKVEKIGEGTYG--VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV   79 (294)
T ss_pred             CceEEEEEecCCCCE--EEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence            367788899999999  9999988  677899998765421 12235677889999999999999999999999999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      |||+++
T Consensus        80 ~e~~~~   85 (294)
T PLN00009         80 FEYLDL   85 (294)
T ss_pred             Eecccc
Confidence            999864

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.83  E-value=1.5e-09  Score=80.69  Aligned_cols=81  Identities=21%  Similarity=0.369  Sum_probs=67.9

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CC----eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QE----RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .....+||+|.||  .||+|.|  .+    .+|++|++......+...+++.++-.|.+++|+|++++++++... .+.|
T Consensus       698 lkk~kvLGsgAfG--tV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s-~~ql  774 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFG--TVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS-TLQL  774 (1177)
T ss_pred             hhhhceeccccce--eEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc-hHHH
Confidence            4556899999999  9999999  33    468999887665344578899999999999999999999999664 4899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      |.+|++.|.|
T Consensus       775 vtq~mP~G~L  784 (1177)
T KOG1025|consen  775 VTQLMPLGCL  784 (1177)
T ss_pred             HHHhcccchH
Confidence            9999999875

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.83  E-value=2.8e-08  Score=67.46  Aligned_cols=78  Identities=13%  Similarity=0.110  Sum_probs=61.0

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHh-cCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQ-MDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~-l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||.+..  ++..+++|.+.....  .........+...+.. .+|++++++++.+...+..++||||+
T Consensus         1 ~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~   78 (316)
T cd05620           1 KVLGKGSFG--KVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL   78 (316)
T ss_pred             CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC
Confidence            368999999  9999998  678899998875320  1223344556666654 47999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~g~L   83 (316)
T cd05620          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            98875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.83  E-value=1.4e-08  Score=72.68  Aligned_cols=77  Identities=19%  Similarity=0.162  Sum_probs=67.9

Q ss_pred             cCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           40 EREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        40 ~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      ..+++|.|.||  .||-|..  +|+.+++|.+++.. +.+....+.+|+++|..++||.++.+--.+..++..|+|||-+
T Consensus       568 ~devLGSGQFG--~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl  645 (888)
T KOG4236|consen  568 ADEVLGSGQFG--TVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL  645 (888)
T ss_pred             hHhhccCCcce--eeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh
Confidence            46899999999  9999988  78999999998654 4555678899999999999999999999999999999999966


Q ss_pred             CC
Q 045247          117 EY  118 (121)
Q Consensus       117 ~~  118 (121)
                      .|
T Consensus       646 ~G  647 (888)
T KOG4236|consen  646 HG  647 (888)
T ss_pred             cc
Confidence            44

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.82  E-value=3.5e-08  Score=67.14  Aligned_cols=78  Identities=17%  Similarity=0.143  Sum_probs=59.9

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHH-HHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNI-VYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~-~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++..  .+..+++|.+.....  ......+..+. ..+..++|+|++++.+.+...+..+++|||+
T Consensus         1 ~~lg~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05602           1 KVIGKGSFG--KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI   78 (325)
T ss_pred             CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCC
Confidence            368999999  9999988  667899998865320  11223344443 3467789999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~~~L   83 (325)
T cd05602          79 NGGEL   83 (325)
T ss_pred             CCCcH
Confidence            99875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.82  E-value=4e-08  Score=66.87  Aligned_cols=79  Identities=18%  Similarity=0.179  Sum_probs=63.1

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----Ccc
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----PIP  109 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----~~~  109 (121)
                      |...+.||.|.|+  .||++..  .+..+++|.+.... .......+.+|+..++.++|+|++++.+++...     ...
T Consensus         2 y~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           2 YKIQEVIGKGSYG--VVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             eEEEEEEeecCCe--EEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence            6677899999999  9999988  67889999887432 122345678899999999999999999887543     247


Q ss_pred             EEEEeccCC
Q 045247          110 ILVFEYGEY  118 (121)
Q Consensus       110 ~lv~e~~~~  118 (121)
                      +++|||+.+
T Consensus        80 ~lv~e~~~~   88 (338)
T cd07859          80 YVVFELMES   88 (338)
T ss_pred             EEEEecCCC
Confidence            999999964

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.82  E-value=3.9e-08  Score=64.45  Aligned_cols=77  Identities=16%  Similarity=0.282  Sum_probs=63.9

Q ss_pred             CeeecCCCccceEEEEEe-C--C--eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW-Q--E--RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~-~--~--~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.++  .||++.+ .  +  ..+++|.+...........+..++..++.++|+|++++.+.+.. ...++++||+
T Consensus         1 ~~ig~g~~~--~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           1 KKLGDGSFG--VVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             CcCCccCcc--cEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence            368999999  9999987 2  2  35889988776522446788899999999999999999999887 8899999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        78 ~~~~L   82 (257)
T cd05040          78 PLGSL   82 (257)
T ss_pred             CCCcH
Confidence            98875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.82  E-value=7.1e-08  Score=63.60  Aligned_cols=84  Identities=14%  Similarity=0.181  Sum_probs=67.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC----ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL----PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--P  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~  107 (121)
                      .+|...+.||+|.++  .||++..  ++..+++|.+....    .......+.+++..++.++|++++++.+++...  .
T Consensus         2 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   79 (264)
T cd06653           2 VNWRLGKLLGRGAFG--EVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEK   79 (264)
T ss_pred             CceeeeeeEccCCCe--EEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCC
Confidence            468888999999999  9999988  67889999875321    122346778899999999999999999988654  4


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++++||.++++|
T Consensus        80 ~~~~v~e~~~~~~L   93 (264)
T cd06653          80 KLSIFVEYMPGGSI   93 (264)
T ss_pred             EEEEEEEeCCCCcH
Confidence            57899999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.82  E-value=4.4e-08  Score=66.05  Aligned_cols=80  Identities=19%  Similarity=0.291  Sum_probs=67.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .|...+.||.|.++  .||.+..  .+..+++|.+....  .......+..++..+..++|+|++++.+++......++|
T Consensus        16 ~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          16 LFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             hhhhheeecCCCCe--EEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            47777899999999  9999988  67889999876432  123346788899999999999999999999998999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      +||+.+
T Consensus        94 ~e~~~g   99 (307)
T cd06607          94 MEYCLG   99 (307)
T ss_pred             HHhhCC
Confidence            999875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.81  E-value=2e-08  Score=65.78  Aligned_cols=80  Identities=16%  Similarity=0.274  Sum_probs=66.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      .+|...+.||+|.||  .||.+...+..+++|.++...   ....+..++..+..++|+|++++.+.+.. +..+++|||
T Consensus         6 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~   79 (254)
T cd05083           6 QKLTLGEIIGEGEFG--AVLQGEYTGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMEL   79 (254)
T ss_pred             HHceeeeeeccCCCC--ceEecccCCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEEC
Confidence            357788999999999  999987777778999886542   34567889999999999999999988865 457999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        80 ~~~~~L   85 (254)
T cd05083          80 MSKGNL   85 (254)
T ss_pred             CCCCCH
Confidence            998875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.81  E-value=4.4e-08  Score=64.70  Aligned_cols=77  Identities=25%  Similarity=0.340  Sum_probs=60.5

Q ss_pred             CeeecCCCccceEEEEEe-C-------------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           42 EVIKQCDFYITKLYKGFW-Q-------------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~-~-------------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      +.||+|.++  .||++.. .             ...+++|.+.... ......+..++..+..++|||++++++.+....
T Consensus         1 ~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRT--QIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcc--eEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            358999999  9999975 1             1246777765442 233456777888899999999999999998888


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..+++|||+++|+|
T Consensus        78 ~~~lv~e~~~~~~l   91 (262)
T cd05077          78 ENIMVEEFVEFGPL   91 (262)
T ss_pred             CCEEEEecccCCCH
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.81  E-value=1.9e-08  Score=65.80  Aligned_cols=82  Identities=18%  Similarity=0.238  Sum_probs=66.5

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhH-HHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSV-YKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~-~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||.|.+|  .||++..  .+..+++|.+........ ......++..+..++|++++++.+.+......+++||
T Consensus         1 y~~~~~lg~G~~g--~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~   78 (260)
T PF00069_consen    1 YRLVKKLGSGGFG--TVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME   78 (260)
T ss_dssp             EEEEEEEEEESSE--EEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred             CEEeEEEEeCCCE--EEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccc
Confidence            3456789999999  9999999  677899999987751111 2233558888999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      ++++++|
T Consensus        79 ~~~~~~L   85 (260)
T PF00069_consen   79 YCPGGSL   85 (260)
T ss_dssp             EETTEBH
T ss_pred             ccccccc
Confidence            9988653

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.81  E-value=3.1e-08  Score=67.55  Aligned_cols=83  Identities=8%  Similarity=0.076  Sum_probs=66.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCC---ChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCC
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESL---PDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETP  107 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~  107 (121)
                      +|...+.||+|.||  .||.+..     .+..+++|.+....   .......+..+...+..++ |++++++.+.+....
T Consensus         1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~   78 (332)
T cd05614           1 NFELLKVLGTGAYG--KVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA   78 (332)
T ss_pred             CceEEEEEeecCCE--EEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC
Confidence            46777899999999  9998865     46778999886432   0122355677888888885 999999999998888


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..+++|||+++|+|
T Consensus        79 ~~~lv~e~~~~g~L   92 (332)
T cd05614          79 KLHLILDYVSGGEM   92 (332)
T ss_pred             EEEEEEeCCCCCcH
Confidence            99999999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.81  E-value=7.2e-08  Score=64.43  Aligned_cols=81  Identities=19%  Similarity=0.125  Sum_probs=67.3

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |.....||+|.++  .||++..  .+..+++|.+.... ......+.+++..+..++|++++++++.+...+..++++||
T Consensus        21 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~   97 (285)
T cd06648          21 LDNFVKIGEGSTG--IVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF   97 (285)
T ss_pred             hhcceEeccCCCe--EEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence            4445789999999  9999987  67788999876543 23345678888999999999999999999888999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        98 ~~~~~L  103 (285)
T cd06648          98 LEGGAL  103 (285)
T ss_pred             cCCCCH
Confidence            998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.81  E-value=1.3e-08  Score=67.30  Aligned_cols=83  Identities=16%  Similarity=0.188  Sum_probs=69.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~l  111 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+....  .......+..+...+..+. |+|++++++.+......++
T Consensus         2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l   79 (280)
T cd05581           2 DFKFGKIIGEGSFS--TVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF   79 (280)
T ss_pred             CceEeeeecCCCce--EEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence            67788899999999  9999998  67889999886532  1223456778888899998 9999999999988899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +||++++++|
T Consensus        80 v~e~~~~~~L   89 (280)
T cd05581          80 VLEYAPNGEL   89 (280)
T ss_pred             EEcCCCCCcH
Confidence            9999988875

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.80  E-value=9.5e-08  Score=63.10  Aligned_cols=81  Identities=19%  Similarity=0.418  Sum_probs=62.5

Q ss_pred             CcCCeeecCCCccceEEEEEe--CCe--EEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec------CC
Q 045247           39 DEREVIKQCDFYITKLYKGFW--QER--LISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE------TP  107 (121)
Q Consensus        39 ~~~~~ig~g~~~~~~v~~~~~--~~~--~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~------~~  107 (121)
                      ...+.||+|.||  .||++.+  .+.  .+++|.+.... .......+..|...+..++|+|++++++.+..      ..
T Consensus         2 ~i~~~ig~G~~g--~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   79 (272)
T cd05075           2 ALGKTLGEGEFG--SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP   79 (272)
T ss_pred             ccccccCcccCc--eEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence            456789999999  9999988  332  57888776542 12345678889999999999999999987743      23


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++++||+++|+|
T Consensus        80 ~~~~v~e~~~~~~l   93 (272)
T cd05075          80 SPVVILPFMKHGDL   93 (272)
T ss_pred             CcEEEEEeCCCCcH
Confidence            57899999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.80  E-value=9.8e-08  Score=62.11  Aligned_cols=83  Identities=16%  Similarity=0.211  Sum_probs=69.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--CccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLET--PIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~~~l  111 (121)
                      +|...+.||+|.++  .+|++..  .+..+++|.+..... ......+..++..++.+.|++++++.+.+...  ...++
T Consensus         1 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l   78 (260)
T cd06606           1 EWTRGELLGRGSFG--SVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNI   78 (260)
T ss_pred             CceeeeEeeecCce--EEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEE
Confidence            36677899999999  9999998  577899998876531 13356788899999999999999999999887  78999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||+++++|
T Consensus        79 v~e~~~~~~L   88 (260)
T cd06606          79 FLEYVSGGSL   88 (260)
T ss_pred             EEEecCCCcH
Confidence            9999988764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.80  E-value=4.6e-08  Score=64.96  Aligned_cols=76  Identities=12%  Similarity=0.056  Sum_probs=62.0

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCC
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      ||+|.|+  .||.+..  .+..+++|.+.....  ......+..++..+..++|++++++.+.+......+++|||++++
T Consensus         1 lg~g~~g--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (277)
T cd05577           1 LGKGGFG--EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGG   78 (277)
T ss_pred             CCCCCce--eEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCC
Confidence            5889999  9999987  678899998865321  122345567889999999999999999998888999999999987


Q ss_pred             CC
Q 045247          120 TL  121 (121)
Q Consensus       120 ~L  121 (121)
                      +|
T Consensus        79 ~L   80 (277)
T cd05577          79 DL   80 (277)
T ss_pred             cH
Confidence            64

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.80  E-value=8.9e-08  Score=62.89  Aligned_cols=78  Identities=21%  Similarity=0.329  Sum_probs=60.9

Q ss_pred             CeeecCCCccceEEEEEe-C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe-cCCccEEEEec
Q 045247           42 EVIKQCDFYITKLYKGFW-Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL-ETPIPILVFEY  115 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~-~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~-~~~~~~lv~e~  115 (121)
                      +.||+|.|+  .||++.. .    ...+++|.+...........+..++..++.++|+|++++++.+. .....++++||
T Consensus         1 ~~lg~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFG--CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCc--eEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence            358999999  9999986 1    34688888754332344567788889999999999999999765 45568899999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +.+|+|
T Consensus        79 ~~~~~L   84 (262)
T cd05058          79 MKHGDL   84 (262)
T ss_pred             CCCCCH
Confidence            998875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.80  E-value=2.7e-08  Score=66.16  Aligned_cols=80  Identities=21%  Similarity=0.298  Sum_probs=66.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+..... ......+..|+..++.++|+|++++.+.+......+++|
T Consensus         1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (284)
T cd07860           1 NFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   78 (284)
T ss_pred             CceeeeeecCCCce--EEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence            46777899999999  9999988  678899998864321 122356788999999999999999999998889999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+.+
T Consensus        79 e~~~~   83 (284)
T cd07860          79 EFLHQ   83 (284)
T ss_pred             ecccc
Confidence            99863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.79  E-value=3.4e-08  Score=65.69  Aligned_cols=83  Identities=16%  Similarity=0.271  Sum_probs=66.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-C------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-Q------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      +|...+.||+|.|+  .||++.. .      +..+++|.+...........+..+..++..++|+|++++++.+......
T Consensus         6 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           6 TVRFMEELGEDRFG--KVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHhCCCCCC--eEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            35566789999999  9999986 2      3568999887543222345678888899999999999999999988899


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+.+++|
T Consensus        84 ~~~~e~~~~~~l   95 (283)
T cd05091          84 SMIFSYCSHSDL   95 (283)
T ss_pred             EEEEEcCCCCcH
Confidence            999999987754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.79  E-value=9.8e-09  Score=67.53  Aligned_cols=77  Identities=25%  Similarity=0.372  Sum_probs=60.0

Q ss_pred             CeeecCCCccceEEEEEe--CC-------eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           42 EVIKQCDFYITKLYKGFW--QE-------RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +.||.|.|+  .||++..  .+       ..+++|.+.... ......+..+...+..++|+|++++.+.+......++|
T Consensus         1 ~~lg~G~~~--~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFT--KIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccch--hheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence            368999999  9999976  22       235566554332 23345677888899999999999999999988899999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        78 ~e~~~~g~L   86 (258)
T cd05078          78 QEYVKFGSL   86 (258)
T ss_pred             EecCCCCcH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.79  E-value=6.8e-10  Score=74.55  Aligned_cols=78  Identities=15%  Similarity=0.201  Sum_probs=69.8

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |+..+++|+|++|  .|+++..  .|..+++|.....   ...++++.|+.++.+..++++++.+|.+-....+++||||
T Consensus        35 FDi~~KLGEGSYG--SV~KAIH~EsG~v~AIK~VPV~---sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   35 FDIVGKLGEGSYG--SVHKAIHRESGHVLAIKKVPVD---TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             HHHHHHhcCCcch--HHHHHHHhccCcEEEEEecCcc---chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence            5677899999999  9999987  7888999988775   4678899999999999999999999999888999999999


Q ss_pred             cCCCC
Q 045247          116 GEYRT  120 (121)
Q Consensus       116 ~~~g~  120 (121)
                      +.-|+
T Consensus       110 CGAGS  114 (502)
T KOG0574|consen  110 CGAGS  114 (502)
T ss_pred             cCCCc
Confidence            98776

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.78  E-value=5.9e-08  Score=63.51  Aligned_cols=83  Identities=12%  Similarity=0.062  Sum_probs=65.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEec-CCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLE-TPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-~~~~~lv  112 (121)
                      +|...+.+|.|.++  .||.+..  .+..+++|.+..... ......+..++..++.++|++++++.+.+.. ....+++
T Consensus         1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv   78 (257)
T cd08223           1 AYCFVRVVGKGSYG--EVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV   78 (257)
T ss_pred             CceEEEEecCCCCe--EEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence            46778899999999  9999988  667899998865421 2334567888899999999999999887754 3457899


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        79 ~e~~~~~~l   87 (257)
T cd08223          79 MGFCEGGDL   87 (257)
T ss_pred             ecccCCCcH
Confidence            999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.77  E-value=6.6e-08  Score=69.62  Aligned_cols=89  Identities=12%  Similarity=0.038  Sum_probs=70.2

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      ......+|...+.||+|.||  .||++..  .+..+++|.+.... .......+..++..+..+.|++++++...+....
T Consensus        27 ~~~~~~rY~i~~~LG~G~fG--~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         27 AKEQAKKYWISRVLGSGATG--TVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             ccccCCCEEEEEEEecCCCE--EEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence            33455689999999999999  9999987  78899999987543 2234566788888999999999999877664322


Q ss_pred             --------ccEEEEeccCCCCC
Q 045247          108 --------IPILVFEYGEYRTL  121 (121)
Q Consensus       108 --------~~~lv~e~~~~g~L  121 (121)
                              ..++||||+++|+|
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL  126 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDL  126 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcH
Confidence                    36799999999875

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.77  E-value=9.1e-08  Score=63.70  Aligned_cols=82  Identities=16%  Similarity=0.342  Sum_probs=62.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCe----EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QER----LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~----~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      +|...+.||.|.|+  .||++.+  .+.    .+++|.+...........+..++..+..+.|+|++++++++. ....+
T Consensus         8 ~~~~~~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~   84 (279)
T cd05111           8 ELRKLKLLGSGVFG--TVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQ   84 (279)
T ss_pred             hceeccccCccCCc--ceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccE
Confidence            57778899999999  9999987  443    466777654321223456677777888999999999999874 45678


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +++||+++|+|
T Consensus        85 ~i~e~~~~gsL   95 (279)
T cd05111          85 LVTQLSPLGSL   95 (279)
T ss_pred             EEEEeCCCCcH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.77  E-value=2.8e-08  Score=64.91  Aligned_cols=83  Identities=16%  Similarity=0.266  Sum_probs=68.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||.|.++  .+|++..  .+..+++|.+.... .......+..++..++.++|+|++++.+.+......++++
T Consensus         1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd08530           1 DFKVLKKLGKGSYG--SVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM   78 (256)
T ss_pred             CceEeeeecCCCce--eEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe
Confidence            36677889999999  9999987  67788899886532 1233566778889999999999999999998889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        79 e~~~~~~L   86 (256)
T cd08530          79 EYAPFGDL   86 (256)
T ss_pred             hhcCCCCH
Confidence            99988764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.77  E-value=1.1e-07  Score=63.17  Aligned_cols=83  Identities=20%  Similarity=0.364  Sum_probs=66.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe----EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER----LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~----~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      .+|...+.||+|.|+  .||++.+  .+.    .+++|.+...........+..+...+..+.|+|++++.+.+.. ...
T Consensus         7 ~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~   83 (279)
T cd05109           7 TELKKVKVLGSGAFG--TVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV   83 (279)
T ss_pred             hheeeeeecCCCCCc--eEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence            467788999999999  9999986  333    4788888755433445678888889999999999999998864 567


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+++|+|
T Consensus        84 ~l~~~~~~~g~l   95 (279)
T cd05109          84 QLVTQLMPYGCL   95 (279)
T ss_pred             EEEEEcCCCCCH
Confidence            899999998875

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.77  E-value=2.6e-08  Score=69.56  Aligned_cols=90  Identities=19%  Similarity=0.238  Sum_probs=66.3

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHH--HHHHHHhcCCCCcceeeeEE
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSIN--NIVYAAQMDHKHILKLIGCC  103 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~--~~~~l~~l~h~~~~~~~~~~  103 (121)
                      .++=-.+.........+.||+|.||  .||+|.|.|..+++|.+....   + .++-+  |+.-.-.++|.||..+++.-
T Consensus       201 lplLVQRTiarqI~L~e~IGkGRyG--EVwrG~wrGe~VAVKiF~srd---E-~SWfrEtEIYqTvmLRHENILgFIaaD  274 (513)
T KOG2052|consen  201 LPLLVQRTIARQIVLQEIIGKGRFG--EVWRGRWRGEDVAVKIFSSRD---E-RSWFRETEIYQTVMLRHENILGFIAAD  274 (513)
T ss_pred             chhHhHHhhhheeEEEEEecCcccc--ceeeccccCCceEEEEecccc---h-hhhhhHHHHHHHHHhccchhhhhhhcc
Confidence            3333334455678889999999999  999999999999999987653   1 22222  33334457899999998755


Q ss_pred             ec----CCccEEEEeccCCCCC
Q 045247          104 LE----TPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~----~~~~~lv~e~~~~g~L  121 (121)
                      ..    -.+++||.+|-++|+|
T Consensus       275 ~~~~gs~TQLwLvTdYHe~GSL  296 (513)
T KOG2052|consen  275 NKDNGSWTQLWLVTDYHEHGSL  296 (513)
T ss_pred             ccCCCceEEEEEeeecccCCcH
Confidence            33    2479999999999986

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.77  E-value=9.8e-08  Score=62.99  Aligned_cols=83  Identities=17%  Similarity=0.195  Sum_probs=64.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-C--CeEEEEEEecCCC---------ChhHHHHHHHHHHHHHh-cCCCCcceeeeEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-Q--ERLISVLKFDESL---------PDSVYKYSINNIVYAAQ-MDHKHILKLIGCC  103 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~--~~~~~~k~~~~~~---------~~~~~~~~~~~~~~l~~-l~h~~~~~~~~~~  103 (121)
                      +|...+.||+|.++  .||++.. .  +..+++|.+....         .......+..++..+.. ++|+|++++++.+
T Consensus         1 ~y~~~~~ig~G~~~--~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   78 (269)
T cd08528           1 EYAVLEHLGSGAFG--CVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF   78 (269)
T ss_pred             CchhhhhhcCCCCc--eEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence            46777889999999  9999998 3  5678888775321         01223456677776654 7899999999999


Q ss_pred             ecCCccEEEEeccCCCCC
Q 045247          104 LETPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~~~~~~lv~e~~~~g~L  121 (121)
                      ......+++|||+++++|
T Consensus        79 ~~~~~~~lv~e~~~~~~l   96 (269)
T cd08528          79 LENDRLYIVMDLIEGAPL   96 (269)
T ss_pred             ccCCeEEEEEecCCCCcH
Confidence            999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.77  E-value=1.4e-07  Score=61.89  Aligned_cols=76  Identities=21%  Similarity=0.333  Sum_probs=60.8

Q ss_pred             eeecCCCccceEEEEEe----CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccC
Q 045247           43 VIKQCDFYITKLYKGFW----QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      .||+|.|+  .||++.+    .+..+++|.+..... ......+..++..+..++|+|++++++.+. .+..+++|||++
T Consensus         2 ~lg~G~~g--~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~   78 (257)
T cd05116           2 ELGSGNFG--TVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE   78 (257)
T ss_pred             cCCCcCCc--ceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence            58999999  9999865    467789998865431 223567888899999999999999998874 466789999999


Q ss_pred             CCCC
Q 045247          118 YRTL  121 (121)
Q Consensus       118 ~g~L  121 (121)
                      +|+|
T Consensus        79 ~~~L   82 (257)
T cd05116          79 LGPL   82 (257)
T ss_pred             CCcH
Confidence            8865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.76  E-value=6.3e-08  Score=63.37  Aligned_cols=75  Identities=27%  Similarity=0.403  Sum_probs=59.7

Q ss_pred             CeeecCCCccceEEEEEe--CC----------eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           42 EVIKQCDFYITKLYKGFW--QE----------RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~----------~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      +.||+|.|+  .||++..  .+          ..+++|.+....  .....+..++..++.++|+|++++++.+.. ...
T Consensus         1 ~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFT--NIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH--RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             Ccccccccc--eEEEEEEeccCCccccCCccceeeeeeccccch--hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence            368999999  9999988  33          235666655432  225678888899999999999999999877 778


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++|||+++|+|
T Consensus        76 ~lv~e~~~~~~L   87 (259)
T cd05037          76 IMVEEYVKFGPL   87 (259)
T ss_pred             EEEEEcCCCCcH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.76  E-value=5.2e-09  Score=65.76  Aligned_cols=79  Identities=19%  Similarity=0.319  Sum_probs=65.8

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|+..++||+|.+|  .|+++..  +...+++|..+.... ...-.+.++|+.+++.+.|+|++++++.......+-+|+
T Consensus         3 ~ydkmekigegtyg--tvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf   80 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYG--TVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_pred             chHHHHhhcCCcce--eeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence            45667899999999  9999988  667789998876541 222456788999999999999999999999989999999


Q ss_pred             eccC
Q 045247          114 EYGE  117 (121)
Q Consensus       114 e~~~  117 (121)
                      ||+.
T Consensus        81 e~cd   84 (292)
T KOG0662|consen   81 EFCD   84 (292)
T ss_pred             HHhh
Confidence            9874

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.76  E-value=1.3e-07  Score=64.18  Aligned_cols=80  Identities=18%  Similarity=0.284  Sum_probs=66.8

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .|...+.||+|.|+  .||++..  .+..+++|.+....  .......+..++..++.++|+|++++.+++......+++
T Consensus        26 ~f~~~~~lg~G~~~--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv  103 (317)
T cd06635          26 LFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV  103 (317)
T ss_pred             hhhhhheeccCCCe--EEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence            37778899999999  9999987  67788999886432  123345788899999999999999999999998999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      |||+++
T Consensus       104 ~e~~~g  109 (317)
T cd06635         104 MEYCLG  109 (317)
T ss_pred             EeCCCC
Confidence            999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.75  E-value=6.1e-08  Score=67.86  Aligned_cols=74  Identities=8%  Similarity=-0.005  Sum_probs=63.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .+|...+.||.|.||  .||.+..  .+..+++|....       ..+.+|+.+++.++|+|++++.+.+......++++
T Consensus        92 ~~y~~~~~lg~G~~g--~V~~~~d~~~~~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~  162 (391)
T PHA03212         92 AGFSILETFTPGAEG--FAFACIDNKTCEHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL  162 (391)
T ss_pred             CCcEEEEEEcCCCCe--EEEEEEECCCCCEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence            569999999999999  9999988  677889986432       23578899999999999999999998888999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      |++.+
T Consensus       163 e~~~~  167 (391)
T PHA03212        163 PRYKT  167 (391)
T ss_pred             ecCCC
Confidence            98753

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.74  E-value=3.6e-08  Score=65.45  Aligned_cols=80  Identities=18%  Similarity=0.210  Sum_probs=63.5

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||.|.++  .||++..  .+..+++|.+.............+++..+..++ |++++++.+.+......++|||
T Consensus         1 y~~~~~ig~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           1 YKVIKQLGDGTFG--SVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             CeeheeeccCCce--EEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence            4566789999999  9999998  577899998865431122233456788888899 9999999999988999999999


Q ss_pred             ccCCCC
Q 045247          115 YGEYRT  120 (121)
Q Consensus       115 ~~~~g~  120 (121)
                      |+ +|+
T Consensus        79 ~~-~~~   83 (283)
T cd07830          79 YM-EGN   83 (283)
T ss_pred             cC-CCC
Confidence            99 554

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=6e-09  Score=70.72  Aligned_cols=84  Identities=13%  Similarity=0.111  Sum_probs=70.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|+.++++|+|.||  .|..+..  ++...++|+++..-  +..+..+-+.|.++|...+||.+..+.-.+...+++.+
T Consensus       168 ~dFdfLKvLGkGTFG--KVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFG--KVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             chhhHHHHhcCCccc--eEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence            568889999999999  9998877  78889999887643  23344555677889999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||.+||.|
T Consensus       246 VMeyanGGeL  255 (516)
T KOG0690|consen  246 VMEYANGGEL  255 (516)
T ss_pred             EEEEccCceE
Confidence            9999999976

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.73  E-value=1e-07  Score=63.64  Aligned_cols=83  Identities=10%  Similarity=0.081  Sum_probs=66.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCC---ChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCC
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESL---PDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETP  107 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~  107 (121)
                      +|...+.||+|.|+  .||.+..     .+..+++|.+....   .......+..++..+..+. |++++++.+++....
T Consensus         1 ~y~~~~~lg~G~~g--~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~   78 (290)
T cd05613           1 NFELLKVLGTGAYG--KVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT   78 (290)
T ss_pred             CceeeeeeccCCcc--eEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC
Confidence            36677889999999  9998876     46778999886532   1122456778888899884 999999999998888


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++++||+++++|
T Consensus        79 ~~~lv~e~~~~~~L   92 (290)
T cd05613          79 KLHLILDYINGGEL   92 (290)
T ss_pred             eEEEEEecCCCCcH
Confidence            89999999998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.73  E-value=9.3e-08  Score=64.09  Aligned_cols=83  Identities=20%  Similarity=0.266  Sum_probs=66.3

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC---
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETP---  107 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~---  107 (121)
                      ..++|...+.||+|.++  .||++..  .+..+++|.++.... ......+..++..++.++|+|++++.+.+....   
T Consensus         5 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~   82 (302)
T cd07864           5 CVDKFDIIGQIGEGTYG--QVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL   82 (302)
T ss_pred             hhhhhheeeeecccCCE--EEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence            45678889999999999  9999998  677889998865421 122345667888999999999999998886544   


Q ss_pred             -------ccEEEEeccCC
Q 045247          108 -------IPILVFEYGEY  118 (121)
Q Consensus       108 -------~~~lv~e~~~~  118 (121)
                             ..++++||+++
T Consensus        83 ~~~~~~~~~~lv~e~~~~  100 (302)
T cd07864          83 DFKKDKGAFYLVFEYMDH  100 (302)
T ss_pred             hccccCCcEEEEEcccCc
Confidence                   78899999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.73  E-value=1.1e-07  Score=65.45  Aligned_cols=85  Identities=15%  Similarity=0.191  Sum_probs=68.0

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC---
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET---  106 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~---  106 (121)
                      ...++|...+.||+|.||  .||.+..  .+..+++|.+.... .......+.+++..++.++|+|++++++.+...   
T Consensus        14 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   91 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL   91 (355)
T ss_pred             hhhhceeEEEEeeecCCE--EEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc
Confidence            455689999999999999  9999987  67889999887543 123356677889999999999999999988543   


Q ss_pred             ---CccEEEEeccCCC
Q 045247          107 ---PIPILVFEYGEYR  119 (121)
Q Consensus       107 ---~~~~lv~e~~~~g  119 (121)
                         ...+++|||++++
T Consensus        92 ~~~~~~~lv~e~~~~~  107 (355)
T cd07874          92 EEFQDVYLVMELMDAN  107 (355)
T ss_pred             cccceeEEEhhhhccc
Confidence               3468999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.72  E-value=1.5e-07  Score=64.12  Aligned_cols=77  Identities=14%  Similarity=0.126  Sum_probs=62.9

Q ss_pred             eeecC--CCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccC
Q 045247           43 VIKQC--DFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        43 ~ig~g--~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      .||.|  .++  .||.+..  .+..+++|...... .......+..++..+..++|+|++++++.+......++++||+.
T Consensus         5 ~ig~g~~~~~--~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           5 EIGRGFCNLT--SVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HhCCcccCce--eEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            45555  888  8999988  78899999887543 12335677888888888999999999999999999999999999


Q ss_pred             CCCC
Q 045247          118 YRTL  121 (121)
Q Consensus       118 ~g~L  121 (121)
                      +++|
T Consensus        83 ~~~l   86 (328)
T cd08226          83 YGSA   86 (328)
T ss_pred             CCCH
Confidence            8764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.71  E-value=7.2e-08  Score=64.46  Aligned_cols=81  Identities=15%  Similarity=0.236  Sum_probs=65.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecC--CccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLET--PIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~~~  110 (121)
                      ++|...+.||.|.++  .||++.+  .+..+++|.+...... .....+..|+..+..++|+|++++.+.+...  ...+
T Consensus         5 ~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           5 DEYEKLNRIEEGTYG--VVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             hhhhhhhhhcCCCCe--EEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence            467888899999999  9999998  5778899988754311 1123456788899999999999999988776  8899


Q ss_pred             EEEeccCC
Q 045247          111 LVFEYGEY  118 (121)
Q Consensus       111 lv~e~~~~  118 (121)
                      +++||+.+
T Consensus        83 lv~e~~~~   90 (293)
T cd07843          83 MVMEYVEH   90 (293)
T ss_pred             EEehhcCc
Confidence            99999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.71  E-value=7.4e-08  Score=65.77  Aligned_cols=84  Identities=13%  Similarity=0.087  Sum_probs=67.6

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec-CC
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE-TP  107 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-~~  107 (121)
                      ...+++|...+.||.|.++  .||++..  .+..+++|.+.... .......+..++..+..++|+|++++.+++.. ..
T Consensus         6 ~~~~~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFG--LVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             eccccceEEEEeecccCCe--EEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            3456789999999999999  9999987  77889999876432 12234667788999999999999999998865 56


Q ss_pred             ccEEEEeccC
Q 045247          108 IPILVFEYGE  117 (121)
Q Consensus       108 ~~~lv~e~~~  117 (121)
                      ..++++||+.
T Consensus        84 ~~~lv~e~~~   93 (328)
T cd07856          84 DIYFVTELLG   93 (328)
T ss_pred             cEEEEeehhc
Confidence            7899999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.71  E-value=1.8e-08  Score=72.04  Aligned_cols=84  Identities=14%  Similarity=0.143  Sum_probs=70.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +=|++.+.||+|.|+  .|-.+..  +|..+++|+++... +......+.+|++.|+..+|||+++++.+...+..+|||
T Consensus        18 GLYDLekTlG~GHFA--VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi   95 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFA--VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI   95 (864)
T ss_pred             eeehhhhhhcCCcee--hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence            347889999999999  6665554  89999999998764 223356788899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      +|.-.+|+|
T Consensus        96 LELGD~GDl  104 (864)
T KOG4717|consen   96 LELGDGGDL  104 (864)
T ss_pred             EEecCCchH
Confidence            998888765

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.71  E-value=1.5e-07  Score=64.98  Aligned_cols=85  Identities=15%  Similarity=0.185  Sum_probs=67.9

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC---
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET---  106 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~---  106 (121)
                      ...++|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+++..++.++|+|++++++.+...   
T Consensus        21 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~   98 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQG--IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL   98 (364)
T ss_pred             chhcceeEEEEeecCCCe--EEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc
Confidence            345689999999999999  9999988  67789999887542 123356678889999999999999999877543   


Q ss_pred             ---CccEEEEeccCCC
Q 045247          107 ---PIPILVFEYGEYR  119 (121)
Q Consensus       107 ---~~~~lv~e~~~~g  119 (121)
                         ...++||||++++
T Consensus        99 ~~~~~~~lv~e~~~~~  114 (364)
T cd07875          99 EEFQDVYIVMELMDAN  114 (364)
T ss_pred             cccCeEEEEEeCCCCC
Confidence               3579999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.71  E-value=3e-07  Score=62.28  Aligned_cols=79  Identities=20%  Similarity=0.299  Sum_probs=65.1

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      |...+.||+|.++  .||++..  .+..+++|.+....  .......+..++..+..++|+|++++.+++......+++|
T Consensus        23 ~~~~~~lg~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  100 (313)
T cd06633          23 FVGLHEIGHGSFG--AVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM  100 (313)
T ss_pred             hhcceeeccCCCe--EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence            4556779999999  9999988  67788999886432  1223456788899999999999999999999999999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+.+
T Consensus       101 e~~~~  105 (313)
T cd06633         101 EYCLG  105 (313)
T ss_pred             ecCCC
Confidence            99864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.70  E-value=1.6e-07  Score=63.21  Aligned_cols=83  Identities=24%  Similarity=0.450  Sum_probs=64.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe----EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER----LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~----~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      .+|...+.||+|.++  .||++.+  .+.    .+++|.+...........+.+++..+..++|+|++++++.+.. ...
T Consensus         7 ~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~   83 (303)
T cd05110           7 TELKRVKVLGSGAFG--TVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTI   83 (303)
T ss_pred             hhceeccccccCCCc--cEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCc
Confidence            356777899999999  9999987  333    4678877654322334467888899999999999999998865 456


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+++|+|
T Consensus        84 ~~v~e~~~~g~l   95 (303)
T cd05110          84 QLVTQLMPHGCL   95 (303)
T ss_pred             eeeehhcCCCCH
Confidence            789999998864

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.69  E-value=1.2e-07  Score=63.07  Aligned_cols=78  Identities=21%  Similarity=0.318  Sum_probs=64.5

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||.|.++  .||++..  .+..+++|.+..... ......+..|+..++.++|++++++.+.+......+++||
T Consensus         1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e   78 (283)
T cd07835           1 YQKVEKIGEGTYG--VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE   78 (283)
T ss_pred             CchheEecCCCCe--EEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence            4566789999999  9999988  688899998865421 1223567788999999999999999999998899999999


Q ss_pred             ccC
Q 045247          115 YGE  117 (121)
Q Consensus       115 ~~~  117 (121)
                      |++
T Consensus        79 ~~~   81 (283)
T cd07835          79 FLD   81 (283)
T ss_pred             ccC
Confidence            985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.67  E-value=9.4e-08  Score=62.58  Aligned_cols=76  Identities=12%  Similarity=0.053  Sum_probs=63.3

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCC
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      ||.|.++  .||.+..  .+..+++|.+.....  ......+..++..+..++|+|++++.+.+......++++||++++
T Consensus         1 lg~g~~~--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (265)
T cd05579           1 ISKGAYG--RVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGG   78 (265)
T ss_pred             CCCCCce--EEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCC
Confidence            5789999  9999998  588899998865431  123566788889999999999999999998889999999999987


Q ss_pred             CC
Q 045247          120 TL  121 (121)
Q Consensus       120 ~L  121 (121)
                      +|
T Consensus        79 ~L   80 (265)
T cd05579          79 DL   80 (265)
T ss_pred             cH
Confidence            64

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.67  E-value=2.6e-07  Score=61.26  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=61.0

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecC--CccEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLET--PIPILV  112 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~--~~~~lv  112 (121)
                      |...+.||+|.++  .||++..  .+..+++|.+..............++..+..+. |+|++++.+.+...  ...+++
T Consensus         1 y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv   78 (282)
T cd07831           1 YKILGKIGEGTFS--EVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV   78 (282)
T ss_pred             CceEeeccccccc--eEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence            4456789999999  9999988  677889998865421222233456777777775 99999999999877  789999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      +||+++
T Consensus        79 ~e~~~~   84 (282)
T cd07831          79 FELMDM   84 (282)
T ss_pred             EecCCc
Confidence            999974

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.66  E-value=4.3e-07  Score=60.00  Aligned_cols=82  Identities=16%  Similarity=0.321  Sum_probs=63.0

Q ss_pred             CCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----
Q 045247           38 YDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----  107 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----  107 (121)
                      |...+.||+|.++  .||++.+     .+..+++|.+.... .......+.+|+..++.++|+|++++.+.+....    
T Consensus         1 ~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   78 (273)
T cd05074           1 FTLGRMLGKGEFG--SVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR   78 (273)
T ss_pred             CcchhcccCCCCC--CEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence            4456789999999  9999976     35678999887543 1233556788999999999999999999875432    


Q ss_pred             --ccEEEEeccCCCCC
Q 045247          108 --IPILVFEYGEYRTL  121 (121)
Q Consensus       108 --~~~lv~e~~~~g~L  121 (121)
                        .++++++|+++|+|
T Consensus        79 ~~~~~~~~~~~~~~~l   94 (273)
T cd05074          79 LPIPMVILPFMKHGDL   94 (273)
T ss_pred             ccceEEEEecCCCCcH
Confidence              34788999988764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.66  E-value=6.4e-08  Score=64.34  Aligned_cols=79  Identities=19%  Similarity=0.315  Sum_probs=64.9

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||.|.++  .||++..  .+..+++|.++.... ......+..|+..++.++|+|++++++.+......++++|
T Consensus         2 y~~~~~l~~g~~~--~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (284)
T cd07839           2 YEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE   79 (284)
T ss_pred             ceeEEEecccCCe--EEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence            5667889999999  9999998  678899998865321 1123456778999999999999999999999899999999


Q ss_pred             ccCC
Q 045247          115 YGEY  118 (121)
Q Consensus       115 ~~~~  118 (121)
                      |+++
T Consensus        80 ~~~~   83 (284)
T cd07839          80 YCDQ   83 (284)
T ss_pred             cCCC
Confidence            9874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.65  E-value=2e-07  Score=62.17  Aligned_cols=80  Identities=11%  Similarity=0.129  Sum_probs=65.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +|...+.||+|.||  .||++..  .+..+++|.+...........+..++..+.++. |+|++++++.+......+++|
T Consensus         5 ~~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~   82 (288)
T cd06616           5 DLKDLGEIGRGAFG--TVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM   82 (288)
T ss_pred             HhHHHHHhCCCCce--EEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence            45556789999999  9999988  678899998875432334566788888888886 999999999998888899999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||++.
T Consensus        83 e~~~~   87 (288)
T cd06616          83 ELMDI   87 (288)
T ss_pred             ecccC
Confidence            99763

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.65  E-value=1.5e-07  Score=62.85  Aligned_cols=82  Identities=9%  Similarity=0.043  Sum_probs=64.9

Q ss_pred             CCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCC---hhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCc
Q 045247           38 YDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLP---DSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPI  108 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~---~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~  108 (121)
                      |...+.||+|.++  .||.+..     .+..+++|.+.....   ......+..|+..+..+ +|++++++.+.+.....
T Consensus         2 ~~~~~~ig~G~~~--~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~   79 (288)
T cd05583           2 FELLRVLGTGAYG--KVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTK   79 (288)
T ss_pred             ceEEEEeccCCCc--eEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCE
Confidence            5667889999999  9998875     356788998764321   11235677888889988 59999999999988889


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus        80 ~~lv~e~~~~~~L   92 (288)
T cd05583          80 LHLILDYVNGGEL   92 (288)
T ss_pred             EEEEEecCCCCcH
Confidence            9999999998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.65  E-value=2.4e-07  Score=61.91  Aligned_cols=80  Identities=20%  Similarity=0.265  Sum_probs=63.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCc----
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPI----  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~----  108 (121)
                      +|...+.||+|.++  .||++..  .+..+++|..+.... ......+.+|+..++.+. |+|++++.+++...+.    
T Consensus         2 ~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~   79 (295)
T cd07837           2 AYEKLEKIGEGTYG--KVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP   79 (295)
T ss_pred             CceEeeEecccCCe--EEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence            57788899999999  9999998  678899998765421 112356777888899886 6999999998876555    


Q ss_pred             -cEEEEeccCC
Q 045247          109 -PILVFEYGEY  118 (121)
Q Consensus       109 -~~lv~e~~~~  118 (121)
                       .+++|||+++
T Consensus        80 ~~~lv~e~~~~   90 (295)
T cd07837          80 SLYLVFEYLDS   90 (295)
T ss_pred             eEEEEeeccCc
Confidence             8999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.64  E-value=1.9e-07  Score=63.81  Aligned_cols=82  Identities=11%  Similarity=0.113  Sum_probs=65.5

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----C
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----P  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----~  107 (121)
                      .++|...+.||+|.++  .||++..  ++..+++|.+...........+..|+..+..++|+|++++.+.+...     .
T Consensus         4 ~~~y~i~~~lg~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           4 GPRYQNLSYIGEGAYG--MVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             ccceEEEEEEEecCCe--EEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence            3578889999999999  9999987  67889999886432223355677899999999999999999876543     3


Q ss_pred             ccEEEEeccCC
Q 045247          108 IPILVFEYGEY  118 (121)
Q Consensus       108 ~~~lv~e~~~~  118 (121)
                      ..++++||+.+
T Consensus        82 ~~~lv~e~~~~   92 (336)
T cd07849          82 DVYIVQELMET   92 (336)
T ss_pred             eEEEEehhccc
Confidence            47899999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.64  E-value=2e-07  Score=66.24  Aligned_cols=79  Identities=14%  Similarity=0.239  Sum_probs=61.3

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----  106 (121)
                      ....|...+.||+|.||  .||++..  .+..+++|.+....     ....+|+.+++.++|+|++++.+.+...     
T Consensus        64 ~~~~y~~~~~LG~G~fg--~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFG--VVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKN  136 (440)
T ss_pred             cCCeEEEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence            34568899999999999  9999988  67889999875432     1234688899999999999998776331     


Q ss_pred             ---CccEEEEeccCCC
Q 045247          107 ---PIPILVFEYGEYR  119 (121)
Q Consensus       107 ---~~~~lv~e~~~~g  119 (121)
                         ..+++||||++++
T Consensus       137 ~~~~~l~lvmE~~~~~  152 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQT  152 (440)
T ss_pred             CCceEEEEEEecCCcc
Confidence               2466899999853

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.64  E-value=2.2e-07  Score=62.64  Aligned_cols=83  Identities=16%  Similarity=0.234  Sum_probs=65.6

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecC--Cc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLET--PI  108 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~  108 (121)
                      ..++|...+.||.|.++  .||++..  .+..+++|.++..... .....+..|+..+..++|+|++++.+.+...  +.
T Consensus         5 ~~~~y~~~~~ig~g~~~--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (309)
T cd07845           5 SVTEFEKLNRIGEGTYG--IVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDS   82 (309)
T ss_pred             cccceeEeeeeeecCCE--EEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCe
Confidence            34578888999999999  9999998  6888999988644211 1123456788999999999999999988654  46


Q ss_pred             cEEEEeccCC
Q 045247          109 PILVFEYGEY  118 (121)
Q Consensus       109 ~~lv~e~~~~  118 (121)
                      .++||||+.+
T Consensus        83 ~~lv~e~~~~   92 (309)
T cd07845          83 IFLVMEYCEQ   92 (309)
T ss_pred             EEEEEecCCC
Confidence            8999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.63  E-value=1.8e-07  Score=63.75  Aligned_cols=76  Identities=14%  Similarity=0.079  Sum_probs=57.2

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc---CCCCcceeeeEEecCCccEEEEecc
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM---DHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l---~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      ||+|.||  .||++..  .+..+++|.+....  ..........+...+...   +|++++++...+......++||||+
T Consensus         1 lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFG--QVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCce--EEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCC
Confidence            6899999  9999988  67889999886431  011223334444444443   6999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        79 ~~g~L   83 (330)
T cd05586          79 SGGEL   83 (330)
T ss_pred             CCChH
Confidence            98864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.63  E-value=3.6e-07  Score=61.76  Aligned_cols=79  Identities=18%  Similarity=0.304  Sum_probs=65.0

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      |...+.||.|.++  .||++..  .+..+++|.+....  .......+..++..++.++|++++++.+++......++|+
T Consensus        17 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          17 FSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHheeeCCCE--EEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            5666789999999  9999998  66778898876431  1233456778999999999999999999999999999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+.+
T Consensus        95 e~~~~   99 (308)
T cd06634          95 EYCLG   99 (308)
T ss_pred             EccCC
Confidence            99864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.63  E-value=5.8e-07  Score=57.39  Aligned_cols=82  Identities=22%  Similarity=0.269  Sum_probs=68.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |...+.|+.|.++  .+|++..  .+..+++|.+...........+..++..+..++|++++++++.+......++++|+
T Consensus         1 ~~~~~~i~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (225)
T smart00221        1 YELGKKLGEGAFG--KVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY   78 (225)
T ss_pred             CceeeEeecCCCe--EEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence            4456789999999  9999998  47889999988664222466788889999999999999999999888999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        79 ~~~~~L   84 (225)
T smart00221       79 CEGGDL   84 (225)
T ss_pred             cCCCCH
Confidence            988764

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.63  E-value=3.1e-07  Score=61.64  Aligned_cols=82  Identities=20%  Similarity=0.312  Sum_probs=64.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----  107 (121)
                      .++|.....||+|.++  .||++..  .+..+++|.+..... .........++..++.++|++++++++.+....    
T Consensus        11 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865          11 VSKYEKLAKIGQGTFG--EVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN   88 (310)
T ss_pred             hhheEEEEEeecCCCE--EEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence            3478889999999999  9999988  678899998764321 122344567889999999999999999886544    


Q ss_pred             ----ccEEEEeccCC
Q 045247          108 ----IPILVFEYGEY  118 (121)
Q Consensus       108 ----~~~lv~e~~~~  118 (121)
                          ..+++|||+.+
T Consensus        89 ~~~~~~~lv~e~~~~  103 (310)
T cd07865          89 RYKGSFYLVFEFCEH  103 (310)
T ss_pred             CCCceEEEEEcCCCc
Confidence                34999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.63  E-value=3.5e-07  Score=60.66  Aligned_cols=79  Identities=19%  Similarity=0.262  Sum_probs=65.0

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--CccEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--PIPILV  112 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~~~lv  112 (121)
                      |...+.||.|.++  .||++..  .+..+++|.+.... .......+..++..+..++|+|++++.+.+...  ...+++
T Consensus         1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   78 (287)
T cd07840           1 YEKIAQIGEGTYG--QVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV   78 (287)
T ss_pred             CeeeEEeccCCCe--EEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence            4556789999999  9999998  57889999987653 122345677889999999999999999999877  789999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      +||+++
T Consensus        79 ~e~~~~   84 (287)
T cd07840          79 FEYMDH   84 (287)
T ss_pred             eccccc
Confidence            999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.63  E-value=3.1e-07  Score=61.87  Aligned_cols=79  Identities=19%  Similarity=0.358  Sum_probs=64.1

Q ss_pred             CCcCCeeecCCCccceEEEEEe-C---CeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--Ccc
Q 045247           38 YDEREVIKQCDFYITKLYKGFW-Q---ERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--PIP  109 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~-~---~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~~  109 (121)
                      |...+.||+|.++  .||++.. .   +..+++|.+....  .......+..++..+..++|+|++++.+.+...  ...
T Consensus         2 y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (316)
T cd07842           2 YEIEGCIGRGTYG--RVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSV   79 (316)
T ss_pred             ceEEEEeccCCcE--EEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceE
Confidence            5667889999999  9999998 3   5789999887632  012235567788899999999999999999887  789


Q ss_pred             EEEEeccCC
Q 045247          110 ILVFEYGEY  118 (121)
Q Consensus       110 ~lv~e~~~~  118 (121)
                      ++||||+++
T Consensus        80 ~lv~e~~~~   88 (316)
T cd07842          80 YLLFDYAEH   88 (316)
T ss_pred             EEEEeCCCc
Confidence            999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.62  E-value=3.7e-07  Score=62.66  Aligned_cols=81  Identities=10%  Similarity=0.171  Sum_probs=64.3

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC---
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP---  107 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~---  107 (121)
                      ..+.|...+.||.|.++  .||++..  .+..+++|.+.... .......+..++..+..++|+|++++.+++....   
T Consensus        13 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          13 VPDRYRDLKQVGSGAYG--TVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             cccceEEEEEeeecCCe--EEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            34568889999999999  9999987  67889999886432 1222456778999999999999999999886543   


Q ss_pred             ---ccEEEEecc
Q 045247          108 ---IPILVFEYG  116 (121)
Q Consensus       108 ---~~~lv~e~~  116 (121)
                         ..++||||+
T Consensus        91 ~~~~~~lv~e~~  102 (343)
T cd07880          91 RFHDFYLVMPFM  102 (343)
T ss_pred             ccceEEEEEecC
Confidence               348999988

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.62  E-value=2.1e-07  Score=68.65  Aligned_cols=90  Identities=20%  Similarity=0.305  Sum_probs=74.3

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-----C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCccee
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-----Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKL   99 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-----~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~   99 (121)
                      .++....++...+.+|.|.||  .|+++..     .    ...+++|.+.......+...+..|+..++.+. |+|++.+
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG--~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~l  367 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFG--QVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNL  367 (609)
T ss_pred             ceeechhhccccceeeccccc--ceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhh
Confidence            455555666667799999999  9999975     1    34588998886654556788899999999887 9999999


Q ss_pred             eeEEecCCccEEEEeccCCCCC
Q 045247          100 IGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       100 ~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +|+|......++|+||+.+|+|
T Consensus       368 lG~~t~~~~~~~v~Ey~~~G~L  389 (609)
T KOG0200|consen  368 LGACTQDGPLYVIVEYAEHGDL  389 (609)
T ss_pred             eeeeccCCceEEEEEeccCCcH
Confidence            9999998999999999999975

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.62  E-value=9.6e-08  Score=65.00  Aligned_cols=82  Identities=16%  Similarity=0.120  Sum_probs=67.8

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec-----
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE-----  105 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-----  105 (121)
                      ....|...+.||.|.+|  .|+++..  ++..+++|.+.... .....++-.+|+.+++.++|+|++.+.+.+..     
T Consensus        20 i~~~y~~~~~iG~GAyG--vVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~   97 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYG--VVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK   97 (359)
T ss_pred             ccceecccccccCccee--eEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence            34456667899999999  9999998  78899999987443 23447888999999999999999999998866     


Q ss_pred             CCccEEEEeccC
Q 045247          106 TPIPILVFEYGE  117 (121)
Q Consensus       106 ~~~~~lv~e~~~  117 (121)
                      -..+|+|+|+|+
T Consensus        98 f~DvYiV~elMe  109 (359)
T KOG0660|consen   98 FNDVYLVFELME  109 (359)
T ss_pred             cceeEEehhHHh
Confidence            357999999985

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.61  E-value=3.1e-07  Score=63.42  Aligned_cols=77  Identities=8%  Similarity=0.103  Sum_probs=63.7

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ....+|...+.||+|.||  .||++..  .+..+++|......       ...|+.++..++|+|++++++.+......+
T Consensus        63 ~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~valK~~~~~~-------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  133 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEG--RVFVATKPGQPDPVVLKIGQKGT-------TLIEAMLLQNVNHPSVIRMKDTLVSGAITC  133 (357)
T ss_pred             hhhcCcEEEEEecCCCCe--EEEEEEECCCCceEEEEeCCccc-------cHHHHHHHHhCCCCCCcChhheEEeCCeeE
Confidence            344579999999999999  9999998  56778888754432       245778899999999999999999989999


Q ss_pred             EEEeccCC
Q 045247          111 LVFEYGEY  118 (121)
Q Consensus       111 lv~e~~~~  118 (121)
                      +|+|++.+
T Consensus       134 lv~e~~~~  141 (357)
T PHA03209        134 MVLPHYSS  141 (357)
T ss_pred             EEEEccCC
Confidence            99998754

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.60  E-value=1.3e-07  Score=62.07  Aligned_cols=82  Identities=18%  Similarity=0.119  Sum_probs=60.7

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC----ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL----PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      |...+.||+|.++  .||++..  .+....++.+....    ..........+...+..++|+|++++.+.+......++
T Consensus         2 y~i~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (260)
T cd08222           2 YILQQRLGKGSFG--TVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCI   79 (260)
T ss_pred             ceeeeeecCCCCc--eEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEE
Confidence            6677889999999  9999987  33334444433211    11223345567788899999999999999988889999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||+++++|
T Consensus        80 v~e~~~~~~l   89 (260)
T cd08222          80 ITEYCEGRDL   89 (260)
T ss_pred             EEEeCCCCCH
Confidence            9999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.60  E-value=2.2e-07  Score=69.49  Aligned_cols=90  Identities=17%  Similarity=0.177  Sum_probs=70.0

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEE
Q 045247           27 SAKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCC  103 (121)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~  103 (121)
                      .++.+...++-|...++||.|.++  .||++..  .++..++|+.....  ....+.-.+..++.... |+|++.+++++
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtyg--kv~k~k~~~~~~~aa~kI~~~~~--d~deEiE~eynil~~~~~hpnv~~fyg~~   85 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYG--KVYKGRHVKTGQLAAIKIMDPTE--DEEEEIELEYNMLKKYSHHPNVATFYGAF   85 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccce--eEEEEeeeecCceeeeEeecCCc--cccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            455556667778888999999999  9999987  67788888877653  23344555666666654 99999999988


Q ss_pred             e-----cCCccEEEEeccCCCC
Q 045247          104 L-----ETPIPILVFEYGEYRT  120 (121)
Q Consensus       104 ~-----~~~~~~lv~e~~~~g~  120 (121)
                      .     .++.++||||||.+|+
T Consensus        86 ~k~~~~~~DqLWLVMEfC~gGS  107 (953)
T KOG0587|consen   86 IKKDPGNGDQLWLVMEFCGGGS  107 (953)
T ss_pred             EEecCCCCCeEEEEeeccCCcc
Confidence            5     3688999999999997

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.60  E-value=5.3e-07  Score=59.22  Aligned_cols=78  Identities=14%  Similarity=0.024  Sum_probs=58.4

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHH-HHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIV-YAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~-~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||.|.++  .||++..  .+..+++|.+.....  ......+..+.. ......|+|++++++.+...+..++++||+
T Consensus         2 ~~l~~g~~~--~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   79 (260)
T cd05611           2 KPISKGAFG--SVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYL   79 (260)
T ss_pred             ccCCcCCCe--eEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEecc
Confidence            468999999  9999988  678899998865421  111223333333 334557999999999999889999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++++|
T Consensus        80 ~~~~L   84 (260)
T cd05611          80 NGGDC   84 (260)
T ss_pred             CCCCH
Confidence            98875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.59  E-value=3.6e-08  Score=69.30  Aligned_cols=80  Identities=25%  Similarity=0.255  Sum_probs=64.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHH--HHhcCCCCcceeeeEEecCC----cc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVY--AAQMDHKHILKLIGCCLETP----IP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~--l~~l~h~~~~~~~~~~~~~~----~~  109 (121)
                      ......+.+|+|.||  .||++.+.++.|++|++...    +.+.+.+|-.+  +..+.|+||+++++.....+    ..
T Consensus       210 ~pl~l~eli~~Grfg--~V~KaqL~~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey  283 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFG--CVWKAQLDNRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY  283 (534)
T ss_pred             CchhhHHHhhcCccc--eeehhhccCceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence            456677889999999  99999998899999998753    45556655544  44678999999998886655    78


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +||++|.++|+|
T Consensus       284 wLVt~fh~kGsL  295 (534)
T KOG3653|consen  284 WLVTEFHPKGSL  295 (534)
T ss_pred             eEEeeeccCCcH
Confidence            899999999986

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.59  E-value=5.5e-07  Score=60.40  Aligned_cols=82  Identities=12%  Similarity=0.100  Sum_probs=65.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~l  111 (121)
                      .++|...+.||+|.++  .||++..  .+..+++|.+...........+..++..+.... |+|++++++.+......++
T Consensus        14 ~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   91 (296)
T cd06618          14 LNDLENLGEIGSGTCG--QVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI   91 (296)
T ss_pred             cchheeeeEeeccCCe--EEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence            3568888999999999  9999998  488899999875432233455566666666665 9999999999999999999


Q ss_pred             EEeccCC
Q 045247          112 VFEYGEY  118 (121)
Q Consensus       112 v~e~~~~  118 (121)
                      +|||+++
T Consensus        92 v~e~~~~   98 (296)
T cd06618          92 CMELMST   98 (296)
T ss_pred             EeeccCc
Confidence            9999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.58  E-value=2.6e-07  Score=60.19  Aligned_cols=76  Identities=16%  Similarity=0.121  Sum_probs=62.8

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCC
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      ||.|.++  .+|.+..  .+..+++|.+.....  ......+..++..++.++|++++++++.+......+++|||++++
T Consensus         1 lg~G~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   78 (250)
T cd05123           1 LGKGSFG--KVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGG   78 (250)
T ss_pred             CCCCCce--EEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCC
Confidence            5889999  9999988  578889998875431  123456788888999999999999999998999999999999877


Q ss_pred             CC
Q 045247          120 TL  121 (121)
Q Consensus       120 ~L  121 (121)
                      +|
T Consensus        79 ~L   80 (250)
T cd05123          79 EL   80 (250)
T ss_pred             cH
Confidence            64

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.58  E-value=4.8e-07  Score=62.04  Aligned_cols=81  Identities=11%  Similarity=0.196  Sum_probs=63.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC-----
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETP-----  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~-----  107 (121)
                      +.|...+.||+|.++  .||++..  .+..+++|.+..... ......+..++..+..++|+|++++.+++....     
T Consensus        15 ~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~   92 (342)
T cd07879          15 ERYTSLKQVGSGAYG--SVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF   92 (342)
T ss_pred             cceEEEEEeeecCCe--EEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence            678888999999999  9999987  678899998865321 122456778899999999999999999886432     


Q ss_pred             -ccEEEEeccCC
Q 045247          108 -IPILVFEYGEY  118 (121)
Q Consensus       108 -~~~lv~e~~~~  118 (121)
                       ..++++||+..
T Consensus        93 ~~~~lv~e~~~~  104 (342)
T cd07879          93 QDFYLVMPYMQT  104 (342)
T ss_pred             ceEEEEeccccc
Confidence             35899998753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.58  E-value=5.2e-10  Score=73.10  Aligned_cols=84  Identities=15%  Similarity=0.193  Sum_probs=66.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +.|...+.||+|.|+  .|+++..  +|+..++|.+.... .....+.+.+|+++...+.|||++++...+......++|
T Consensus        11 d~y~l~e~igkG~FS--vVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             hhhhHHHHHccCchH--HHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            357777899999999  8888866  56655565554321 122356678889999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      +|++.|++|
T Consensus        89 Fe~m~G~dl   97 (355)
T KOG0033|consen   89 FDLVTGGEL   97 (355)
T ss_pred             EecccchHH
Confidence            999999875

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.57  E-value=4.1e-07  Score=65.06  Aligned_cols=73  Identities=10%  Similarity=0.032  Sum_probs=61.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .+|.....||.|.||  .||++..  .+..+++|....       ....+|+.+++.++|+|++++++.+......+++|
T Consensus       169 ~gy~i~~~Lg~G~~G--~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~  239 (461)
T PHA03211        169 LGFAIHRALTPGSEG--CVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL  239 (461)
T ss_pred             CCeEEEEEEccCCCe--EEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            468888999999999  9999998  567788885332       23467889999999999999999998888999999


Q ss_pred             eccC
Q 045247          114 EYGE  117 (121)
Q Consensus       114 e~~~  117 (121)
                      |++.
T Consensus       240 e~~~  243 (461)
T PHA03211        240 PKYR  243 (461)
T ss_pred             EccC
Confidence            9875

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.57  E-value=4.1e-08  Score=66.54  Aligned_cols=77  Identities=19%  Similarity=0.143  Sum_probs=67.1

Q ss_pred             CeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEEeccCC
Q 045247           42 EVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      +.+|+|.++  .|-.+..  ++..+++|++.... .....++.+|+..+..-. |+|++.++.++.+....|||||=|.|
T Consensus        84 e~LGeGAya--sVqtcv~i~t~~EYAVKiidKq~-gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G  160 (463)
T KOG0607|consen   84 ELLGEGAYA--SVQTCVSIQTGKEYAVKIIDKQP-GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG  160 (463)
T ss_pred             HHhcCccce--eeeeeeeeccchhhhhhhhhcCC-chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence            679999999  9988877  78889999998763 566778888888887655 99999999999999999999999999


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |+|
T Consensus       161 Gpl  163 (463)
T KOG0607|consen  161 GPL  163 (463)
T ss_pred             chH
Confidence            975

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.57  E-value=1.1e-06  Score=58.59  Aligned_cols=80  Identities=16%  Similarity=0.277  Sum_probs=57.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe---CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHh---cCCCCcceeeeEEec----
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW---QERLISVLKFDESLP-DSVYKYSINNIVYAAQ---MDHKHILKLIGCCLE----  105 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~---~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~---l~h~~~~~~~~~~~~----  105 (121)
                      +|...+.||+|.||  .||++..   .+..+++|.++.... .........++..+..   +.|+|++++++++..    
T Consensus         2 ~Y~~~~~lg~G~~g--~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~   79 (290)
T cd07862           2 QYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   79 (290)
T ss_pred             CcceeeEeccCCCe--EEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence            57788899999999  9999987   356789998865421 1122344455555554   479999999998752    


Q ss_pred             -CCccEEEEeccCC
Q 045247          106 -TPIPILVFEYGEY  118 (121)
Q Consensus       106 -~~~~~lv~e~~~~  118 (121)
                       ....+++|||+.+
T Consensus        80 ~~~~~~lv~e~~~~   93 (290)
T cd07862          80 RETKLTLVFEHVDQ   93 (290)
T ss_pred             CCCcEEEEEccCCC
Confidence             3568899999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.56  E-value=1.3e-07  Score=64.09  Aligned_cols=79  Identities=19%  Similarity=0.327  Sum_probs=65.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCC-cceeeeEEecCC-----
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKH-ILKLIGCCLETP-----  107 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~-~~~~~~~~~~~~-----  107 (121)
                      .|...+++|+|.|+  .||++..  ++..+++|+++.... ...-....+|+.++..+.|+| ++.+.+++...+     
T Consensus        12 ~~~~~eklGeGtyg--~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYG--VVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHhCCCCce--EEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            46666789999999  9999998  788999999987641 112345678999999999999 999999998766     


Q ss_pred             -ccEEEEeccC
Q 045247          108 -IPILVFEYGE  117 (121)
Q Consensus       108 -~~~lv~e~~~  117 (121)
                       .+++|+||+.
T Consensus        90 ~~l~lvfe~~d  100 (323)
T KOG0594|consen   90 GKLYLVFEFLD  100 (323)
T ss_pred             ceEEEEEEeec
Confidence             7889999875

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.55  E-value=5.3e-07  Score=61.51  Aligned_cols=77  Identities=12%  Similarity=0.187  Sum_probs=62.2

Q ss_pred             cCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh-------------HHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           40 EREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS-------------VYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        40 ~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~-------------~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      ..+.||.|.++  .||++..  .+..+++|.+.......             ....+.+|+.++..++|+|++++.+.+.
T Consensus        13 ~~~~ig~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   90 (335)
T PTZ00024         13 KGAHLGEGTYG--KVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYV   90 (335)
T ss_pred             hhhcccCCCce--eEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEe
Confidence            45779999999  9999987  67889999876432111             0124678899999999999999999999


Q ss_pred             cCCccEEEEeccCC
Q 045247          105 ETPIPILVFEYGEY  118 (121)
Q Consensus       105 ~~~~~~lv~e~~~~  118 (121)
                      ..+..+++|||+.+
T Consensus        91 ~~~~~~lv~e~~~~  104 (335)
T PTZ00024         91 EGDFINLVMDIMAS  104 (335)
T ss_pred             cCCcEEEEEecccc
Confidence            99999999999874

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.55  E-value=3.2e-07  Score=61.91  Aligned_cols=69  Identities=19%  Similarity=0.172  Sum_probs=55.4

Q ss_pred             eEEEEEeCCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           53 KLYKGFWQERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        53 ~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      .++++..++..+++|.+.... .......+..|+..++.++|+|++++++++......+++|||+++|+|
T Consensus        17 ~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216          17 HLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             EEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence            444444368889999987542 234457788999999999999999999999999999999999998864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.54  E-value=3.9e-07  Score=62.24  Aligned_cols=82  Identities=18%  Similarity=0.312  Sum_probs=64.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecC--Cc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLET--PI  108 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~--~~  108 (121)
                      .++|...+.||.|.++  .||++..  .+..+++|.+.... .......+..++..+..+ +|+|++++++++...  ..
T Consensus         6 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           6 LRKYEILQKLGKGAYG--IVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hhHHHHhHhhcCCCCe--eEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence            4567888899999999  9999988  67788999875432 122345566788999999 899999999987543  45


Q ss_pred             cEEEEeccCC
Q 045247          109 PILVFEYGEY  118 (121)
Q Consensus       109 ~~lv~e~~~~  118 (121)
                      .++||||+++
T Consensus        84 ~~lv~e~~~~   93 (337)
T cd07852          84 IYLVFEYMET   93 (337)
T ss_pred             EEEEeccccc
Confidence            8999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.54  E-value=1.1e-06  Score=60.56  Aligned_cols=83  Identities=14%  Similarity=0.159  Sum_probs=66.6

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC----
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET----  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~----  106 (121)
                      ..+.|...+.||+|.++  .||.+..  .+..+++|.+.... .......+.+++..+..++|+|++++++++...    
T Consensus        14 ~~~~y~~~~~lg~g~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (353)
T cd07850          14 VLKRYQNLKPIGSGAQG--IVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE   91 (353)
T ss_pred             hhcceEEEEEeccCCCE--EEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence            45679999999999999  9999988  77889999886432 123345677889999999999999999887543    


Q ss_pred             --CccEEEEeccCC
Q 045247          107 --PIPILVFEYGEY  118 (121)
Q Consensus       107 --~~~~lv~e~~~~  118 (121)
                        ...++||||+.+
T Consensus        92 ~~~~~~lv~e~~~~  105 (353)
T cd07850          92 EFQDVYLVMELMDA  105 (353)
T ss_pred             ccCcEEEEEeccCC
Confidence              357999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.54  E-value=1.1e-06  Score=58.51  Aligned_cols=77  Identities=10%  Similarity=0.081  Sum_probs=56.1

Q ss_pred             eeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHH---HHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           43 VIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIV---YAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~---~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      .||+|.||  .||++..  .+..+++|.+......  ........+..   .+...+|++++.+.+.+...+..++||||
T Consensus         1 ~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCe--EEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence            37899999  9999988  6788999988654311  11122233332   33345699999999999888899999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++|+|
T Consensus        79 ~~~~~L   84 (279)
T cd05633          79 MNGGDL   84 (279)
T ss_pred             CCCCCH
Confidence            999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.54  E-value=8.3e-07  Score=60.99  Aligned_cols=87  Identities=13%  Similarity=0.121  Sum_probs=67.1

Q ss_pred             HHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           28 AKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        28 ~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      ...+...+++|...+.||+|.|+  .||++..  ++..+++|.+.... .......+.+++..+..++|+|++++.+.+.
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~   86 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   86 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCe--EEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence            34555677889999999999999  9999987  67889999887542 1122456778999999999999999998875


Q ss_pred             cC------CccEEEEecc
Q 045247          105 ET------PIPILVFEYG  116 (121)
Q Consensus       105 ~~------~~~~lv~e~~  116 (121)
                      ..      ...+++++++
T Consensus        87 ~~~~~~~~~~~~lv~~~~  104 (345)
T cd07877          87 PARSLEEFNDVYLVTHLM  104 (345)
T ss_pred             ecccccccccEEEEehhc
Confidence            42      3356777765

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.52  E-value=1e-06  Score=59.49  Aligned_cols=72  Identities=15%  Similarity=0.254  Sum_probs=57.4

Q ss_pred             CeeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CCccEEEEec
Q 045247           42 EVIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TPIPILVFEY  115 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~~~~lv~e~  115 (121)
                      ..||+|.||  .||++..    .+..+++|.+....   ....+.+|+..++.++|+|++++.+++..  ....++++||
T Consensus         7 ~~lG~G~~g--~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07867           7 CKVGRGTYG--HVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY   81 (317)
T ss_pred             eEeccCCCe--eEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence            579999999  9999986    34578888876542   23456778999999999999999998854  4567899999


Q ss_pred             cCC
Q 045247          116 GEY  118 (121)
Q Consensus       116 ~~~  118 (121)
                      +++
T Consensus        82 ~~~   84 (317)
T cd07867          82 AEH   84 (317)
T ss_pred             eCC
Confidence            875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.51  E-value=2.1e-07  Score=69.09  Aligned_cols=87  Identities=14%  Similarity=0.213  Sum_probs=68.6

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe-C-CeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEE-ec--
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW-Q-ERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCC-LE--  105 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~-~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~-~~--  105 (121)
                      ......+.+.+.|-+|+|+  .||.+.. . +..+++|++-.. +......+.+|+..|+.|. |+|||.+++.. ..  
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa--~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~  109 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFA--QVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS  109 (738)
T ss_pred             EECCEEEEEEEEEccCCcE--EEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc
Confidence            3445567778999999999  9999999 4 478899887655 2455788999999999998 99999999833 21  


Q ss_pred             ----CCccEEEEeccCCCCC
Q 045247          106 ----TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ----~~~~~lv~e~~~~g~L  121 (121)
                          .-..+|.||||.+|.|
T Consensus       110 ~~~~~~EvllLmEyC~gg~L  129 (738)
T KOG1989|consen  110 SNNGVWEVLLLMEYCKGGSL  129 (738)
T ss_pred             CCCceeEEEeehhhccCCcH
Confidence                1346799999998764

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.51  E-value=6e-07  Score=61.47  Aligned_cols=81  Identities=10%  Similarity=0.144  Sum_probs=63.1

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecC----
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLET----  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~----  106 (121)
                      ..+.|...+.||.|.||  .||++..  .+..+++|.+..... ......+.+++..++.++|+|++++++++...    
T Consensus        13 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07878          13 VPERYQNLTPVGSGAYG--SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE   90 (343)
T ss_pred             hhhhhhhheecccCCCe--EEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence            44678889999999999  9999988  677899998875421 12245567899999999999999998877432    


Q ss_pred             --CccEEEEecc
Q 045247          107 --PIPILVFEYG  116 (121)
Q Consensus       107 --~~~~lv~e~~  116 (121)
                        ...+++++++
T Consensus        91 ~~~~~~~~~~~~  102 (343)
T cd07878          91 NFNEVYLVTNLM  102 (343)
T ss_pred             ccCcEEEEeecC
Confidence              3467888876

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.50  E-value=1.1e-06  Score=59.45  Aligned_cols=73  Identities=15%  Similarity=0.247  Sum_probs=57.5

Q ss_pred             CCeeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CCccEEEEe
Q 045247           41 REVIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TPIPILVFE  114 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~~~~lv~e  114 (121)
                      ...||+|.||  .||++..    .+..+++|.+....   ......+|+..+..++|+|++++.+.+..  ....+++||
T Consensus         6 ~~~lG~G~~g--~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07868           6 GCKVGRGTYG--HVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD   80 (317)
T ss_pred             ccccccCCCe--EEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence            3579999999  9999986    34678999886542   23346778999999999999999998854  355789999


Q ss_pred             ccCC
Q 045247          115 YGEY  118 (121)
Q Consensus       115 ~~~~  118 (121)
                      |+.+
T Consensus        81 ~~~~   84 (317)
T cd07868          81 YAEH   84 (317)
T ss_pred             ccCC
Confidence            9764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.49  E-value=4.7e-07  Score=61.84  Aligned_cols=81  Identities=11%  Similarity=0.144  Sum_probs=64.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEec----CCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLE----TPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~----~~~  108 (121)
                      .+|...+.||.|.++  .||++..  ++..+++|.+..... ......+..++..+..++|+|++++.+.+..    ...
T Consensus         5 ~~y~~~~~lg~g~~g--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           5 SRYKPIENIGSGAYG--VVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hceeeeeeeecCCCe--EEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence            578888999999999  9999988  688899998875431 1234667788999999999999999887643    346


Q ss_pred             cEEEEeccCC
Q 045247          109 PILVFEYGEY  118 (121)
Q Consensus       109 ~~lv~e~~~~  118 (121)
                      .++||||+.+
T Consensus        83 ~~lv~e~~~~   92 (334)
T cd07855          83 VYVVMDLMES   92 (334)
T ss_pred             EEEEEehhhh
Confidence            8999999853

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.49  E-value=1.1e-08  Score=78.07  Aligned_cols=90  Identities=13%  Similarity=0.059  Sum_probs=71.6

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      ++..-..+|...++||.|.||  .|.....  ++..+++|.+..+..-  ....-|..|-.+|..-++++|+.+.-.+.+
T Consensus        69 ~lrl~~~DfeilKvIGrGaFG--EV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   69 ELRLKAEDFEILKVIGRGAFG--EVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHhCCHHhhHHHHHhcccccc--eeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            344455789999999999999  9988877  6788899988764311  113345666677777778999999999999


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      ...+|+||||++||+|
T Consensus       147 ~~~LYlVMdY~pGGDl  162 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDL  162 (1317)
T ss_pred             ccceEEEEecccCchH
Confidence            9999999999999985

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.48  E-value=9.2e-08  Score=69.93  Aligned_cols=84  Identities=10%  Similarity=0.010  Sum_probs=67.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .-|...+.||-|.||  .|+...-  +...+++|.++....  ......+..|-.+|...+..++++++-.+.+.+.+|+
T Consensus       629 SmFvkik~iGvGAFG--eV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYF  706 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFG--EVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF  706 (1034)
T ss_pred             cceEEEeeecccccc--eeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEE
Confidence            347778999999999  9987765  556678887775431  1224556777788999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||++||++
T Consensus       707 VMdYIPGGDm  716 (1034)
T KOG0608|consen  707 VMDYIPGGDM  716 (1034)
T ss_pred             EEeccCCccH
Confidence            9999999974

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.48  E-value=1.5e-08  Score=73.83  Aligned_cols=86  Identities=15%  Similarity=0.151  Sum_probs=74.8

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++..+|.....+|.|.+|  .||++.+  .+...++|.++... .......+.|+-.++.-+|+|++.+++.+...+..+
T Consensus        12 nP~ddyellqrvgsgTyg--dvyKaRd~~s~elaavkvVkLep-~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklw   88 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYG--DVYKARDKRSGELAAVKVVKLEP-GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLW   88 (829)
T ss_pred             CCccchhheeeecCCccc--chhhhcccccCchhhheeeeccC-CccccccccceeeeecCCCcChHHHHhhhhhhcCcE
Confidence            566789999999999999  9999998  67788899887653 445566778888888999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +.|||+.+|+|
T Consensus        89 icMEycgggsl   99 (829)
T KOG0576|consen   89 ICMEYCGGGSL   99 (829)
T ss_pred             EEEEecCCCcc
Confidence            99999999876

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.48  E-value=1.9e-06  Score=57.35  Aligned_cols=77  Identities=10%  Similarity=0.077  Sum_probs=56.6

Q ss_pred             eeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHH---HHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           43 VIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINN---IVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~---~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      .||+|.|+  .||++..  .+..+++|.+......  ........+   ...+....|++++.+.+.+...+..++||||
T Consensus         1 ~ig~g~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCe--EEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEec
Confidence            37899999  9999987  6788999988754311  111112222   2334456799999999999888999999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++|+|
T Consensus        79 ~~g~~L   84 (278)
T cd05606          79 MNGGDL   84 (278)
T ss_pred             CCCCcH
Confidence            999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.47  E-value=1e-06  Score=58.35  Aligned_cols=79  Identities=19%  Similarity=0.299  Sum_probs=64.8

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||.|.++  .+|++..  .+..+++|.+...... .....+..++..++.++|++++++.+.+......++++|
T Consensus         1 y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   78 (283)
T cd05118           1 YQKLGKIGEGTYG--VVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE   78 (283)
T ss_pred             CccceeeecCCCc--eEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence            4456789999999  9999988  6778899988754311 234567788889999999999999999988899999999


Q ss_pred             ccCC
Q 045247          115 YGEY  118 (121)
Q Consensus       115 ~~~~  118 (121)
                      |+++
T Consensus        79 ~~~~   82 (283)
T cd05118          79 FMDT   82 (283)
T ss_pred             ccCC
Confidence            9875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.46  E-value=1.7e-07  Score=63.87  Aligned_cols=75  Identities=20%  Similarity=0.312  Sum_probs=57.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--C---cc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--P---IP  109 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~---~~  109 (121)
                      .|...+.+|.|.||  .||++..  ++..+++|..-...     .-...|...|+.++|||++++.-++...  .   ..
T Consensus        25 ~~~~~~liG~GsFg--~Vyq~~~~e~~~~vAIKKv~~d~-----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l   97 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFG--VVYQAKLRETEEEVAIKKVLQDK-----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL   97 (364)
T ss_pred             EEEeeEEEeecccc--eEEEEEEcCCCceeEEEEecCCC-----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence            35667899999999  9999998  66789998764432     2234678889999999999999888642  2   34


Q ss_pred             EEEEeccCC
Q 045247          110 ILVFEYGEY  118 (121)
Q Consensus       110 ~lv~e~~~~  118 (121)
                      -+||||+|.
T Consensus        98 nlVleymP~  106 (364)
T KOG0658|consen   98 NLVLEYMPE  106 (364)
T ss_pred             HHHHHhchH
Confidence            479999874

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.46  E-value=8.5e-07  Score=60.69  Aligned_cols=81  Identities=11%  Similarity=0.142  Sum_probs=64.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----P  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----~  107 (121)
                      +.|...+.||.|.++  .||++..  ++..+++|.+.... ..........++..+..++|+|++++.+.+...     .
T Consensus         5 ~~y~~~~~lg~G~~~--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (337)
T cd07858           5 TKYVPIKPIGRGAYG--IVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN   82 (337)
T ss_pred             cceeEEEEeccCCCe--EEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence            468888899999999  9999988  67889999887532 122345667888999999999999999877543     3


Q ss_pred             ccEEEEeccCC
Q 045247          108 IPILVFEYGEY  118 (121)
Q Consensus       108 ~~~lv~e~~~~  118 (121)
                      ..++++||+.+
T Consensus        83 ~~~lv~e~~~~   93 (337)
T cd07858          83 DVYIVYELMDT   93 (337)
T ss_pred             cEEEEEeCCCC
Confidence            47999999863

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.45  E-value=6.8e-07  Score=61.30  Aligned_cols=80  Identities=16%  Similarity=0.132  Sum_probs=64.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-------
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-------  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-------  106 (121)
                      ..|...+.||.|.++  .||++..  ++..+++|.+.... ......+.+++..++.++|+|++++++++...       
T Consensus         5 ~~y~~~~~Lg~g~~g--~vy~~~~~~~~~~v~iK~i~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           5 SRYMDLRPLGCGSNG--LVFSAVDSDCDKRVAVKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             cceEEEEEecCCCCE--EEEEEEECCCCcEEEEEEEecCC-CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            468888999999999  9999988  67889999886553 23456678899999999999999998766442       


Q ss_pred             -------CccEEEEeccCC
Q 045247          107 -------PIPILVFEYGEY  118 (121)
Q Consensus       107 -------~~~~lv~e~~~~  118 (121)
                             ...++++||+++
T Consensus        82 ~~~~~~~~~~~lv~e~~~~  100 (342)
T cd07854          82 VGSLTELNSVYIVQEYMET  100 (342)
T ss_pred             cccccccceEEEEeecccc
Confidence                   357899999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.44  E-value=7.9e-07  Score=60.46  Aligned_cols=80  Identities=15%  Similarity=0.118  Sum_probs=65.3

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC-----c
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETP-----I  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~-----~  108 (121)
                      +|...+.||.|.++  .||++..  .+..+++|.+..... ....+.+..++..++.++|+|++++.+.+....     .
T Consensus         1 ~y~i~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~   78 (330)
T cd07834           1 RYELLKPIGSGAYG--VVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFND   78 (330)
T ss_pred             CceeeeeecCCCCe--EEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccc
Confidence            36677899999999  9999998  578899998876431 233567888999999999999999999887654     7


Q ss_pred             cEEEEeccCC
Q 045247          109 PILVFEYGEY  118 (121)
Q Consensus       109 ~~lv~e~~~~  118 (121)
                      .+++|||+++
T Consensus        79 ~~lv~e~~~~   88 (330)
T cd07834          79 VYIVTELMET   88 (330)
T ss_pred             eEEEecchhh
Confidence            8999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.44  E-value=5.4e-07  Score=59.67  Aligned_cols=79  Identities=19%  Similarity=0.313  Sum_probs=64.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |...+.||.|.++  .+|.+..  .+..+++|.+.... .......+..++..++.+.|++++++.+.+......++++|
T Consensus         1 y~~~~~ig~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   78 (282)
T cd07829           1 YEKLEKLGEGTYG--VVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE   78 (282)
T ss_pred             CeeehcccccCcc--eEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence            3455778999999  9999998  57889999887643 12224566788889999999999999999988899999999


Q ss_pred             ccCC
Q 045247          115 YGEY  118 (121)
Q Consensus       115 ~~~~  118 (121)
                      |+++
T Consensus        79 ~~~~   82 (282)
T cd07829          79 YCDM   82 (282)
T ss_pred             CcCc
Confidence            9874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.43  E-value=8.4e-07  Score=59.60  Aligned_cols=82  Identities=18%  Similarity=0.265  Sum_probs=63.5

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----  107 (121)
                      .++|...+.||.|.++  .||++..  .+..+++|.+..... ........+|+..+..++|+|++++.+.+....    
T Consensus         7 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           7 LRDYEILGKLGEGTFG--EVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             cccEEEEEEeccCCCE--EEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence            4688899999999999  9999998  677889998764421 112345667889999999999999988775432    


Q ss_pred             ----ccEEEEeccCC
Q 045247          108 ----IPILVFEYGEY  118 (121)
Q Consensus       108 ----~~~lv~e~~~~  118 (121)
                          ..++++||+..
T Consensus        85 ~~~~~~~lv~~~~~~   99 (311)
T cd07866          85 RKRGSVYMVTPYMDH   99 (311)
T ss_pred             ccCceEEEEEecCCc
Confidence                46899999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.43  E-value=1.2e-07  Score=68.55  Aligned_cols=82  Identities=15%  Similarity=0.155  Sum_probs=64.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEec---CCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc--cE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFD---ESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI--PI  110 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~---~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~--~~  110 (121)
                      ....++||.|.|-  .||++.+  .|..++.-.++   .........++..|+.+|+.|.|+||++++..+.+...  ..
T Consensus        42 ~k~~evLGrGafK--tVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in  119 (632)
T KOG0584|consen   42 LKFDEVLGRGAFK--TVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTIN  119 (632)
T ss_pred             eehhhhcccccce--eeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceee
Confidence            3567889999999  9999998  56555443332   22223446889999999999999999999999987655  78


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +|+|.+..|+|
T Consensus       120 ~iTEL~TSGtL  130 (632)
T KOG0584|consen  120 FITELFTSGTL  130 (632)
T ss_pred             eeeecccCCcH
Confidence            99999999986

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.41  E-value=2.3e-06  Score=57.00  Aligned_cols=79  Identities=18%  Similarity=0.293  Sum_probs=56.9

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHh---cCCCCcceeeeEEec-----C
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQ---MDHKHILKLIGCCLE-----T  106 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~---l~h~~~~~~~~~~~~-----~  106 (121)
                      |...+.||+|.+|  .||++..  ++..+++|.+..... .........++..+..   ++|+|++++++++..     .
T Consensus         2 y~~~~~lg~g~~g--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           2 YEPVAEIGVGAYG--TVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             ceEeeEEeecCCe--EEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            6677899999999  9999988  678899998865321 1112234445555544   479999999988754     2


Q ss_pred             CccEEEEeccCC
Q 045247          107 PIPILVFEYGEY  118 (121)
Q Consensus       107 ~~~~lv~e~~~~  118 (121)
                      ...+++|||+.+
T Consensus        80 ~~~~lv~e~~~~   91 (288)
T cd07863          80 TKVTLVFEHVDQ   91 (288)
T ss_pred             ceEEEEEccccc
Confidence            457899999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.41  E-value=1.6e-06  Score=60.67  Aligned_cols=76  Identities=13%  Similarity=0.068  Sum_probs=61.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ...|.....||.|.+|  .||++..    .+..+++|.+...      ....+|+.+++.++|+|++++++.+......+
T Consensus        91 ~~~y~i~~~Lg~G~~g--~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~  162 (392)
T PHA03207         91 RMQYNILSSLTPGSEG--EVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVC  162 (392)
T ss_pred             cCceEEEEeecCCCCe--EEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence            3468889999999999  9999875    3456788876543      22456888999999999999999998888999


Q ss_pred             EEEeccCC
Q 045247          111 LVFEYGEY  118 (121)
Q Consensus       111 lv~e~~~~  118 (121)
                      ++||++.+
T Consensus       163 lv~e~~~~  170 (392)
T PHA03207        163 MVMPKYKC  170 (392)
T ss_pred             EEehhcCC
Confidence            99998754

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.41  E-value=4.6e-06  Score=52.24  Aligned_cols=76  Identities=20%  Similarity=0.258  Sum_probs=63.7

Q ss_pred             eecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           44 IKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        44 ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ||+|.++  .+|++..  .+..+++|.+...........+.+++..+..+.|++++++.+.+......++++|++.+++|
T Consensus         1 l~~g~~~--~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFG--TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCce--EEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            5789999  9999998  38889999988764221346788899999999999999999999888899999999987654

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.39  E-value=5.1e-06  Score=55.06  Aligned_cols=80  Identities=13%  Similarity=0.043  Sum_probs=57.8

Q ss_pred             HhcCCCcCCee--ecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHh-cCCCCcceeeeEEecCCc
Q 045247           34 ATNNYDEREVI--KQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQ-MDHKHILKLIGCCLETPI  108 (121)
Q Consensus        34 ~~~~~~~~~~i--g~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~-l~h~~~~~~~~~~~~~~~  108 (121)
                      -.++|...+.+  |.|.|+  .||++..  .+..+++|.+..... ...     +...... .+|++++++++.+...+.
T Consensus        12 ~~~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~-~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~   83 (267)
T PHA03390         12 FLKNCEIVKKLKLIDGKFG--KVSVLKHKPTQKLFVQKIIKAKNF-NAI-----EPMVHQLMKDNPNFIKLYYSVTTLKG   83 (267)
T ss_pred             HHHhhccccceeecCCCce--EEEEEEEcCCCcEEEEEEEehhhc-chh-----hHHHHHHhhcCCCEEEEEEEEecCCe
Confidence            34456665665  999999  9999987  677788888765320 111     1111111 269999999999999899


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus        84 ~~iv~e~~~~~~L   96 (267)
T PHA03390         84 HVLIMDYIKDGDL   96 (267)
T ss_pred             eEEEEEcCCCCcH
Confidence            9999999998875

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.36  E-value=1.5e-06  Score=63.00  Aligned_cols=77  Identities=14%  Similarity=0.237  Sum_probs=64.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CC-----CcceeeeEEecCCc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HK-----HILKLIGCCLETPI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~-----~~~~~~~~~~~~~~  108 (121)
                      .|.+.++||+|.||  .|.+|.+  ++..|++|.++...  .-......|+.+|..++ |.     |++++++++...++
T Consensus       187 rY~V~e~LGkGtFG--QVvk~~d~~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H  262 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFG--QVVKAYDHKTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH  262 (586)
T ss_pred             EEEEEEEecccccc--eeEEEEecCCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence            46779999999999  9999998  78999999998763  34556677888888776 33     89999999999999


Q ss_pred             cEEEEeccC
Q 045247          109 PILVFEYGE  117 (121)
Q Consensus       109 ~~lv~e~~~  117 (121)
                      .++|+|.+.
T Consensus       263 lciVfELL~  271 (586)
T KOG0667|consen  263 LCIVFELLS  271 (586)
T ss_pred             eeeeehhhh
Confidence            999999754

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.36  E-value=2.7e-08  Score=72.77  Aligned_cols=85  Identities=15%  Similarity=0.158  Sum_probs=70.9

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++.+.|.....+|.|.||  .||++..  ++...+.|.+.... ......++-++.+|+..+||+++++++.+...+.++
T Consensus        29 nP~d~WeIiGELGDGAFG--KVyKA~nket~~lAAaKvIetks-eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLw  105 (1187)
T KOG0579|consen   29 NPRDHWEIIGELGDGAFG--KVYKAVNKETKLLAAAKVIETKS-EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLW  105 (1187)
T ss_pred             CHHHHHHHHhhhcCccch--hhhhhhcccchhhhhhhhhcccc-hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceE
Confidence            345566677788999999  9999987  55566777776553 445678899999999999999999999999999999


Q ss_pred             EEEeccCCCC
Q 045247          111 LVFEYGEYRT  120 (121)
Q Consensus       111 lv~e~~~~g~  120 (121)
                      ++.|||.||-
T Consensus       106 iliEFC~GGA  115 (1187)
T KOG0579|consen  106 ILIEFCGGGA  115 (1187)
T ss_pred             EEEeecCCch
Confidence            9999999984

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.34  E-value=1.1e-06  Score=60.26  Aligned_cols=81  Identities=14%  Similarity=0.215  Sum_probs=64.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc---
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI---  108 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~---  108 (121)
                      .++|.....||.|.++  .||.+..  .+..+++|.+..... ......+..++..++.+.|+|++++.+.+...+.   
T Consensus        14 ~~~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          14 PDRYQNLSPVGSGAYG--QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cCceEEEEEeccCCce--EEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            4578888999999999  9999998  577899998765321 1234567788999999999999999887765443   


Q ss_pred             ---cEEEEeccC
Q 045247          109 ---PILVFEYGE  117 (121)
Q Consensus       109 ---~~lv~e~~~  117 (121)
                         .++|+||+.
T Consensus        92 ~~~~~lv~e~~~  103 (343)
T cd07851          92 FQDVYLVTHLMG  103 (343)
T ss_pred             cccEEEEEecCC
Confidence               889999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.34  E-value=2.4e-07  Score=63.43  Aligned_cols=86  Identities=15%  Similarity=0.196  Sum_probs=66.8

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPI  108 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~  108 (121)
                      ...+|++..+||.|+++  .|.....  +.+.+++|+++...  .......++.|-.+.-.. .||.++.+..|+....+
T Consensus       248 ~l~df~ll~vigrgsya--kvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr  325 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYA--KVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR  325 (593)
T ss_pred             ccccceeeeeecCcchh--hhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence            44678999999999999  9988877  77888999887543  112234445554444444 59999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      +|+|.||+++|+|
T Consensus       326 lffvieyv~ggdl  338 (593)
T KOG0695|consen  326 LFFVIEYVNGGDL  338 (593)
T ss_pred             EEEEEEEecCcce
Confidence            9999999999986

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.33  E-value=6e-06  Score=54.80  Aligned_cols=79  Identities=23%  Similarity=0.373  Sum_probs=59.1

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHh---cCCCCcceeeeEEecCCc---
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQ---MDHKHILKLIGCCLETPI---  108 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~---l~h~~~~~~~~~~~~~~~---  108 (121)
                      |...+.||.|.++  .||++..  .+..+++|.+..... ......+..++..+..   +.|++++++.+++...+.   
T Consensus         1 y~~~~~l~~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           1 YEELAEIGEGAYG--TVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             CeEEEEecccCce--EEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence            4566789999999  9999998  578899999875431 1122345556655554   469999999999987766   


Q ss_pred             --cEEEEeccCC
Q 045247          109 --PILVFEYGEY  118 (121)
Q Consensus       109 --~~lv~e~~~~  118 (121)
                        .+++|||+.+
T Consensus        79 ~~~~l~~e~~~~   90 (287)
T cd07838          79 LKLTLVFEHVDQ   90 (287)
T ss_pred             ceeEEEehhccc
Confidence              8999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.28  E-value=7e-06  Score=52.53  Aligned_cols=78  Identities=13%  Similarity=-0.006  Sum_probs=58.8

Q ss_pred             CeeecCCCccceEEEEEeCCeEEEEEEecCCCCh-h------HHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           42 EVIKQCDFYITKLYKGFWQERLISVLKFDESLPD-S------VYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~-~------~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      +.||+|.++  .||++.+.+..+++|........ .      ....+..|+..+..+.|+++......+......+++||
T Consensus         2 ~~l~~G~~~--~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEA--EIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceE--EEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            568999999  99999886667888875533211 1      12456778888888988888777767667778899999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus        80 ~~~G~~L   86 (211)
T PRK14879         80 YIEGEPL   86 (211)
T ss_pred             EeCCcCH
Confidence            9998764

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.28  E-value=3.6e-06  Score=53.53  Aligned_cols=76  Identities=9%  Similarity=-0.027  Sum_probs=51.1

Q ss_pred             CCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhH-------------------------HHHHHHHHHHHHhcCCC
Q 045247           41 REVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSV-------------------------YKYSINNIVYAAQMDHK   94 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~-------------------------~~~~~~~~~~l~~l~h~   94 (121)
                      .+.||+|+++  .||.+.. .|..+++|.++...+...                         ......|...+..+.++
T Consensus         2 ~~~ig~G~~~--~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05147           2 NGCISTGKEA--NVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA   79 (190)
T ss_pred             CCccccccce--EEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence            3679999999  9999998 789999999875421100                         01223477788888776


Q ss_pred             CcceeeeEEecCCccEEEEeccCCCC
Q 045247           95 HILKLIGCCLETPIPILVFEYGEYRT  120 (121)
Q Consensus        95 ~~~~~~~~~~~~~~~~lv~e~~~~g~  120 (121)
                      ++.......  ....++||||+++++
T Consensus        80 ~v~~p~~~~--~~~~~iVmE~i~g~~  103 (190)
T cd05147          80 GIPCPEPIL--LKSHVLVMEFIGDDG  103 (190)
T ss_pred             CCCCCcEEE--ecCCEEEEEEeCCCC
Confidence            654332221  223489999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.25  E-value=4.9e-07  Score=69.74  Aligned_cols=71  Identities=17%  Similarity=0.278  Sum_probs=60.3

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      +-.++|.....+|+|+||  .|+++..  +|+.+|+|++...........+.+|+.++++++|||+++.+..+..
T Consensus       476 RY~~DFEEL~lLGkGGFG--~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVE  548 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFG--SVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVE  548 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCc--eEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhc
Confidence            344678888999999999  9999998  8999999999877533446778899999999999999999888754

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.25  E-value=1.2e-07  Score=73.37  Aligned_cols=88  Identities=16%  Similarity=0.236  Sum_probs=72.1

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ...+-.|....+||.|.||  .||.+..  +|...++|.+.-.. .......+..|..++..+.|||+++.+|+...++.
T Consensus      1231 snV~~rWqrg~~Ig~G~fG--~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFG--KVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred             ccceeeeccccccCCccee--eeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH
Confidence            3445567778999999999  9999998  78888888776432 11223556788889999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++.|||+.+|+|
T Consensus      1309 v~IFMEyC~~GsL 1321 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSL 1321 (1509)
T ss_pred             HHHHHHHhccCcH
Confidence            9999999999986

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.25  E-value=1.2e-07  Score=66.31  Aligned_cols=87  Identities=15%  Similarity=0.164  Sum_probs=63.7

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCC
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMD-HKHILKLIGCCLETP  107 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~  107 (121)
                      ....+|+...+||+|+||  .|..+..  +....++|+++..-.  .....--..|-++|+... .|.++++..++...+
T Consensus       346 i~~tDFnFl~VlGKGSFG--KVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD  423 (683)
T KOG0696|consen  346 IKATDFNFLMVLGKGSFG--KVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD  423 (683)
T ss_pred             eeecccceEEEeccCccc--eeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence            344578889999999999  9998877  456688888765420  011111233445555544 678899999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ++|+||||+.+|+|
T Consensus       424 RLyFVMEyvnGGDL  437 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDL  437 (683)
T ss_pred             heeeEEEEecCchh
Confidence            99999999999986

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.21  E-value=6.3e-06  Score=59.66  Aligned_cols=85  Identities=14%  Similarity=0.285  Sum_probs=55.7

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe------------------CCeEEEEEEecCCCChhHHHH--------------H
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW------------------QERLISVLKFDESLPDSVYKY--------------S   81 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~------------------~~~~~~~k~~~~~~~~~~~~~--------------~   81 (121)
                      ..++|...+.||+|.||  .||++.+                  .++.+++|.+.... ......              .
T Consensus       143 ~~d~F~i~~~LG~GgFG--~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~-~~~~~~fl~e~~~~~~~~e~~  219 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFG--ITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDR-QGVRQDFLKTGTLAKGSAETG  219 (507)
T ss_pred             cccCceEeeEeecCCCe--EEEEEEecccccchhhhhccccccccCceEEEEEecccc-hhhHHHHHhhhhhhhcccchh
Confidence            46689999999999999  9999864                  23468899876432 111122              2


Q ss_pred             HHHHHHHHhcCCCCc-----ceeeeEEec--------CCccEEEEeccCCCCC
Q 045247           82 INNIVYAAQMDHKHI-----LKLIGCCLE--------TPIPILVFEYGEYRTL  121 (121)
Q Consensus        82 ~~~~~~l~~l~h~~~-----~~~~~~~~~--------~~~~~lv~e~~~~g~L  121 (121)
                      ..|+..+..++|.++     +++++++..        ....++||||+++|+|
T Consensus       220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL  272 (507)
T PLN03224        220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATL  272 (507)
T ss_pred             HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcH
Confidence            234555556655543     455555432        3468999999999875

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.20  E-value=9.7e-06  Score=51.46  Aligned_cols=77  Identities=12%  Similarity=0.021  Sum_probs=55.9

Q ss_pred             eeecCCCccceEEEEEeCCeEEEEEEecCCC-Ch------hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           43 VIKQCDFYITKLYKGFWQERLISVLKFDESL-PD------SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~-~~------~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      .||+|.++  .||++.+.+..+++|...... ..      ....++..|...+..+.++++..........+..+++|||
T Consensus         1 ~ig~G~~~--~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEA--IIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceE--EEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            37899999  999998866778888754321 01      1135667888889988887765555555566778999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++++|
T Consensus        79 ~~g~~l   84 (199)
T TIGR03724        79 IEGKPL   84 (199)
T ss_pred             ECCccH
Confidence            998864

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK10345 hypothetical protein; Provisional

Probab=98.20  E-value=1.2e-05  Score=52.06  Aligned_cols=80  Identities=15%  Similarity=0.074  Sum_probs=57.1

Q ss_pred             CCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-----CCCCcceeeeEEecCC---cc
Q 045247           38 YDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQM-----DHKHILKLIGCCLETP---IP  109 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-----~h~~~~~~~~~~~~~~---~~  109 (121)
                      +.....||+|.++  .||........ ++|...... ......+.+|+..+..+     .|+|++++++.+....   ..
T Consensus         4 L~~~~~LG~G~~~--~Vy~hp~~~~k-~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v   79 (210)
T PRK10345          4 LSEQSPLGTGRHR--KCYAHPEDAQR-CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV   79 (210)
T ss_pred             cCCcceecCCCce--EEEECCCCcCe-EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence            4556889999999  99963224333 588776542 22346688999999988     5799999999998763   33


Q ss_pred             E-EEEec--cCCCCC
Q 045247          110 I-LVFEY--GEYRTL  121 (121)
Q Consensus       110 ~-lv~e~--~~~g~L  121 (121)
                      + +|+||  ..+|+|
T Consensus        80 ~~~I~e~~G~~~~tL   94 (210)
T PRK10345         80 YDVIADFDGKPSITL   94 (210)
T ss_pred             EEEEecCCCCcchhH
Confidence            3 68999  445654

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.20  E-value=8e-07  Score=59.34  Aligned_cols=84  Identities=15%  Similarity=0.173  Sum_probs=65.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh-------HHHHHHHHHHHHHhcC-CCCcceeeeEEec
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS-------VYKYSINNIVYAAQMD-HKHILKLIGCCLE  105 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~-------~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~  105 (121)
                      +.|.+.+.+|.|..+  .|.++..  ++...++|.+.......       ....-.+|+.+|+++. ||+++.+.+.+..
T Consensus        17 ~~y~pkeilgrgvss--~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSS--VVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             hhcChHHHhcccchh--hhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            357888899999888  7777766  67778888876543111       1233466778887754 9999999999999


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      +.+.|+|+|.++.|.|
T Consensus        95 ~sF~FlVFdl~prGEL  110 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGEL  110 (411)
T ss_pred             cchhhhhhhhcccchH
Confidence            9999999999999875

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.18  E-value=3.7e-06  Score=60.78  Aligned_cols=81  Identities=11%  Similarity=0.075  Sum_probs=57.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe---CCeEEEEEEe--------------cC--CCChhHHHHHHHHHHHHHhcCCCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW---QERLISVLKF--------------DE--SLPDSVYKYSINNIVYAAQMDHKH   95 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~---~~~~~~~k~~--------------~~--~~~~~~~~~~~~~~~~l~~l~h~~   95 (121)
                      ..+|...+.||+|.||  .||.+..   .+...+.+.+              ..  .........+.+|+.++..++|+|
T Consensus       147 ~~~Y~ii~~LG~G~fG--~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        147 LAHFRVIDDLPAGAFG--KIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhccEEEeEecCCCCc--ceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            4679999999999999  9998865   1111111100              00  000112345778999999999999


Q ss_pred             cceeeeEEecCCccEEEEeccC
Q 045247           96 ILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        96 ~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      ++++++++...+..++++++..
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~  246 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYD  246 (501)
T ss_pred             cCcEeEEEEECCeeEEEEeccc
Confidence            9999999999999999998764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.17  E-value=1.2e-05  Score=51.57  Aligned_cols=71  Identities=18%  Similarity=0.234  Sum_probs=59.0

Q ss_pred             CccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           49 FYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        49 ~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +|  .+|++..  .+..+++|.+...........+..++..+..++|++++++.+.+......++++||+++++|
T Consensus         2 ~g--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L   74 (244)
T smart00220        2 FG--KVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDL   74 (244)
T ss_pred             ce--EEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCH
Confidence            57  8999988  47889999987654222257788899999999999999999999888899999999998764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.16  E-value=2.1e-06  Score=62.25  Aligned_cols=78  Identities=14%  Similarity=0.108  Sum_probs=62.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC----Chh---HHHHHHHHHHHHHhcC---CCCcceeeeEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL----PDS---VYKYSINNIVYAAQMD---HKHILKLIGCC  103 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~----~~~---~~~~~~~~~~~l~~l~---h~~~~~~~~~~  103 (121)
                      .+|.....+|.|.||  .|+.+.+  ....+++|.+.+..    ++.   ....+..|+++|..+.   |+||++++.++
T Consensus       561 s~yttlq~lG~GAyG--kV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYG--KVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             ccceeeeeccccccc--eEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            357788999999999  9999998  55568899887643    111   1234678999999887   99999999999


Q ss_pred             ecCCccEEEEec
Q 045247          104 LETPIPILVFEY  115 (121)
Q Consensus       104 ~~~~~~~lv~e~  115 (121)
                      .+.+..|++||-
T Consensus       639 Eddd~yyl~te~  650 (772)
T KOG1152|consen  639 EDDDYYYLETEV  650 (772)
T ss_pred             ecCCeeEEEecC
Confidence            999999999984

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.13  E-value=5e-05  Score=48.15  Aligned_cols=76  Identities=11%  Similarity=0.062  Sum_probs=53.2

Q ss_pred             CCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChh------------------------H-HHHHHHHHHHHHhcCCC
Q 045247           41 REVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDS------------------------V-YKYSINNIVYAAQMDHK   94 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~------------------------~-~~~~~~~~~~l~~l~h~   94 (121)
                      ...||+|.++  .||++.. +|..+++|.++......                        . ......|...+..+.++
T Consensus         2 ~~~ig~G~~~--~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           2 NGCISTGKEA--NVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CceeecCCCc--EEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            4679999999  9999998 78999999987643100                        0 12234677788888888


Q ss_pred             CcceeeeEEecCCccEEEEeccCCCC
Q 045247           95 HILKLIGCCLETPIPILVFEYGEYRT  120 (121)
Q Consensus        95 ~~~~~~~~~~~~~~~~lv~e~~~~g~  120 (121)
                      ++.........  ..++||||+++++
T Consensus        80 ~i~~p~~~~~~--~~~lVmE~~~g~~  103 (190)
T cd05145          80 GVPVPEPILLK--KNVLVMEFIGDDG  103 (190)
T ss_pred             CCCCceEEEec--CCEEEEEEecCCC
Confidence            76544333322  3489999998864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.13  E-value=7.5e-07  Score=60.35  Aligned_cols=85  Identities=18%  Similarity=0.294  Sum_probs=65.4

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe---CC---eEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW---QE---RLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~---~~---~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      +.....|.....||+|.+|  .||++..   .+   ..+++|.+..... .....+..+|+.+++.++|+|++++..++.
T Consensus        20 ve~l~~ye~ig~Ig~GTYG--~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl   97 (438)
T KOG0666|consen   20 VEDLFEYEGIGKIGRGTYG--KVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFL   97 (438)
T ss_pred             HHHHHHhhccceecccccc--eeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHh
Confidence            3455678888999999999  9999965   22   2467777765421 122355677899999999999999999887


Q ss_pred             c-CCccEEEEeccCC
Q 045247          105 E-TPIPILVFEYGEY  118 (121)
Q Consensus       105 ~-~~~~~lv~e~~~~  118 (121)
                      . ...+++++||.+.
T Consensus        98 ~~d~~v~l~fdYAEh  112 (438)
T KOG0666|consen   98 SHDKKVWLLFDYAEH  112 (438)
T ss_pred             ccCceEEEEehhhhh
Confidence            7 7789999999875

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.12  E-value=2.2e-05  Score=57.31  Aligned_cols=84  Identities=10%  Similarity=-0.014  Sum_probs=59.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEeCCeEEEEEEe-cCC-CCh-----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFWQERLISVLKF-DES-LPD-----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~-~~~-~~~-----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ..|...+.||+|.++  .||++.+.+..+++|.. ... ...     ....++.+|...+..++|++++...........
T Consensus       333 ~~~~~~~~iG~G~~g--~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        333 RRKIPDHLIGKGAEA--DIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             cccCccceeccCCcE--EEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            345668899999999  99999883333333322 111 100     123567889999999999998887766666677


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++++|
T Consensus       411 ~~lv~E~~~g~~L  423 (535)
T PRK09605        411 KTIVMEYIGGKDL  423 (535)
T ss_pred             CEEEEEecCCCcH
Confidence            8999999999875

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.09  E-value=1.7e-05  Score=51.92  Aligned_cols=87  Identities=18%  Similarity=0.062  Sum_probs=64.4

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhH--HHH------HHHHHHHHHhcCCCCcceeeeEEe
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSV--YKY------SINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~--~~~------~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      ...+.|...+.++.|.|+  .||.....+..+++|.++...+...  ...      +.+++..+.++.|+++..+.....
T Consensus        28 ~l~~~y~~~~~l~~~~f~--~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~  105 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDT--KVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL  105 (232)
T ss_pred             HhhCceEEEEEecCCCce--EEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence            345779999999999999  9998544666799999875531111  122      467777888999999998877654


Q ss_pred             cC--------CccEEEEeccCCCCC
Q 045247          105 ET--------PIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~--------~~~~lv~e~~~~g~L  121 (121)
                      ..        ...+++|||++|.+|
T Consensus       106 ~~~~~~~~~~~~~~lvmEyi~G~tL  130 (232)
T PRK10359        106 LAERKTLRYAHTYIMLIEYIEGVEL  130 (232)
T ss_pred             ecccccccccCCeEEEEEEECCccH
Confidence            22        358899999998764

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.08  E-value=1.6e-06  Score=61.46  Aligned_cols=84  Identities=23%  Similarity=0.218  Sum_probs=64.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhH------HHHHHHHHHHHHhcCCCCcceeeeEEec-C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSV------YKYSINNIVYAAQMDHKHILKLIGCCLE-T  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~------~~~~~~~~~~l~~l~h~~~~~~~~~~~~-~  106 (121)
                      ..|..+..+|.|.|+  .||++++  ..+.+++|+-+....+.+      .+..-+|..+.+.++|+.|+++++.+.- .
T Consensus       463 ~RYLlLhLLGrGGFS--EVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFS--EVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             HHHHHHHHhccccHH--HHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            346677889999999  9999998  456688887654432222      2345667788899999999999998864 5


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      +.+.-|+||++|.+|
T Consensus       541 dsFCTVLEYceGNDL  555 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDL  555 (775)
T ss_pred             ccceeeeeecCCCch
Confidence            567789999998775

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.07  E-value=1.7e-05  Score=51.64  Aligned_cols=67  Identities=10%  Similarity=-0.057  Sum_probs=52.4

Q ss_pred             CCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           47 CDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        47 g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      |.++  .||.+..  ++..+++|.++...      ....+...+....|+|++++.+.+...+..+++|||+++|+|
T Consensus         4 g~~~--~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   72 (237)
T cd05576           4 GVID--KVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKL   72 (237)
T ss_pred             cccc--eEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCH
Confidence            6788  9999988  77889999987642      112233334455699999999999988999999999999875

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.06  E-value=3.9e-05  Score=52.41  Aligned_cols=79  Identities=15%  Similarity=0.114  Sum_probs=59.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--C--CeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcC-CCCcceeeeEEecC----
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--Q--ERLISVLKFDESLP-DSVYKYSINNIVYAAQMD-HKHILKLIGCCLET----  106 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~--~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~----  106 (121)
                      +|...+.||+|.|+  .||++..  .  +..+++|.+..... ......+..|+..+..+. |+|++++++.+...    
T Consensus         1 ~y~~~~~lg~G~~g--~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~   78 (332)
T cd07857           1 RYELIKELGQGAYG--IVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNF   78 (332)
T ss_pred             CceEEEEccccCCe--EEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccC
Confidence            35667889999999  9999998  4  67899998865321 122456778888888885 99999998865432    


Q ss_pred             CccEEEEeccC
Q 045247          107 PIPILVFEYGE  117 (121)
Q Consensus       107 ~~~~lv~e~~~  117 (121)
                      ...+++++|+.
T Consensus        79 ~~~~~~~e~~~   89 (332)
T cd07857          79 NELYLYEELME   89 (332)
T ss_pred             CcEEEEEeccc
Confidence            45778888875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PTZ00284 protein kinase; Provisional

Probab=98.00  E-value=4.7e-05  Score=54.53  Aligned_cols=84  Identities=8%  Similarity=0.107  Sum_probs=58.2

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC------CCCcceeee
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD------HKHILKLIG  101 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~------h~~~~~~~~  101 (121)
                      ++....++|...+.||+|.||  .||++..  .+..+++|.++...  ........++..+..+.      |.+++.+..
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg--~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~  198 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFG--KVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR  198 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCE--EEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence            334456778899999999999  9999988  67789999986532  22233444555555544      445777777


Q ss_pred             EEecC-CccEEEEeccC
Q 045247          102 CCLET-PIPILVFEYGE  117 (121)
Q Consensus       102 ~~~~~-~~~~lv~e~~~  117 (121)
                      .+... ...++||+++.
T Consensus       199 ~~~~~~~~~~iv~~~~g  215 (467)
T PTZ00284        199 YFQNETGHMCIVMPKYG  215 (467)
T ss_pred             EEEcCCceEEEEEeccC
Confidence            77553 46788888763

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=97.95  E-value=3.6e-06  Score=55.36  Aligned_cols=83  Identities=13%  Similarity=0.129  Sum_probs=67.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----Cc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----PI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----~~  108 (121)
                      ..|...+.+|+|+|+  .|+....  ++...++|++.-.. ..+....++|+...+++.|+|++++++.....     ..
T Consensus        21 ~Ryri~~~LgeGGfs--fv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFS--FVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             ceEEEeeeecCCCce--eeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            357888999999999  9998876  77888999887654 35567788999999999999999988766543     45


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .|++++|...|+|
T Consensus        98 ~yll~Pyy~~Gsl  110 (302)
T KOG2345|consen   98 AYLLLPYYKRGSL  110 (302)
T ss_pred             EEEEeehhccccH
Confidence            9999999888764

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.93  E-value=8.3e-06  Score=56.77  Aligned_cols=85  Identities=19%  Similarity=0.289  Sum_probs=70.6

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEE
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCC  103 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~  103 (121)
                      .+......|...++||+|.|+  .||++.+ .    +..+++|.+....   ...++..|+..|..+. +.|++++.+++
T Consensus        30 ~~p~~~~~~~~v~kigeGsFs--sv~~a~~~~~~~~~~~valk~i~~ts---~p~ri~~El~~L~~~gG~~ni~~~~~~~  104 (418)
T KOG1167|consen   30 DIPFISNAYKVVNKIGEGSFS--SVYKATDIEQDTKRRYVALKAIYRTS---SPSRILNELEMLYRLGGSDNIIKLNGCF  104 (418)
T ss_pred             hhhhhhhhhhhhccccccchh--hhhhhhHhhhccccceEeeeeccccc---CchHHHHHHHHHHHhccchhhhcchhhh
Confidence            345556778999999999999  9999987 3    3568898887653   3456888999999987 88999999999


Q ss_pred             ecCCccEEEEeccCCC
Q 045247          104 LETPIPILVFEYGEYR  119 (121)
Q Consensus       104 ~~~~~~~lv~e~~~~g  119 (121)
                      ...+...+|+||+++-
T Consensus       105 rnnd~v~ivlp~~~H~  120 (418)
T KOG1167|consen  105 RNNDQVAIVLPYFEHD  120 (418)
T ss_pred             ccCCeeEEEecccCcc
Confidence            9999999999999863

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.92  E-value=2.2e-06  Score=55.95  Aligned_cols=90  Identities=16%  Similarity=0.273  Sum_probs=69.0

Q ss_pred             cccHHHHHH---HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcce
Q 045247           25 IFSAKELEI---ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILK   98 (121)
Q Consensus        25 ~~~~~~~~~---~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~   98 (121)
                      -++++....   ..++|...+.+|.|.++  .|+.|..  ....+.+|.+..-    ..+.+.+|+.+|..++ |+|+++
T Consensus        24 YWdYE~~~i~wg~~ddYeivrk~GRGKYS--EVFeg~~~~~~eK~ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~   97 (338)
T KOG0668|consen   24 YWDYESLVIDWGNQDDYEIVRKVGRGKYS--EVFEGINITNNEKCVIKILKPV----KKKKIKREIKILQNLRGGPNIIK   97 (338)
T ss_pred             hcchhheeeeccccchHHHHHHHcCccHh--hHhcccccCCCceEEEeeechH----HHHHHHHHHHHHHhccCCCCeee
Confidence            345554332   23467778899999999  9999986  5667888888643    3566788999999998 999999


Q ss_pred             eeeEEecC--CccEEEEeccCCCC
Q 045247           99 LIGCCLET--PIPILVFEYGEYRT  120 (121)
Q Consensus        99 ~~~~~~~~--~~~~lv~e~~~~g~  120 (121)
                      +++...++  ..+.|++||+++-+
T Consensus        98 L~DiV~Dp~SktpaLiFE~v~n~D  121 (338)
T KOG0668|consen   98 LLDIVKDPESKTPSLIFEYVNNTD  121 (338)
T ss_pred             hhhhhcCccccCchhHhhhhcccc
Confidence            99988764  45889999988643

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.87  E-value=1.8e-05  Score=57.23  Aligned_cols=79  Identities=16%  Similarity=0.212  Sum_probs=64.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCC-CChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDES-LPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .|...+.||.|+-+  .||+... ..+.+++|..... .+......+.+|+.+|.++. |..++.+++.......+|+||
T Consensus       362 ~Yeilk~iG~GGSS--kV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  362 EYEILKQIGSGGSS--KVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             hhhHHHhhcCCCcc--eeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            37778899999999  9999988 5555666554432 23455788999999999997 999999999999999999999


Q ss_pred             eccC
Q 045247          114 EYGE  117 (121)
Q Consensus       114 e~~~  117 (121)
                      |+-+
T Consensus       440 E~Gd  443 (677)
T KOG0596|consen  440 ECGD  443 (677)
T ss_pred             eccc
Confidence            9743

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.85  E-value=1.3e-05  Score=56.80  Aligned_cols=87  Identities=13%  Similarity=0.102  Sum_probs=68.5

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhH--HHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSV--YKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~--~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ..-+.|..-.+||.|.||  .|+.+.-  +|..++.|.+......+.  ..-.++|-.++...+.+.++.+.-.+...+.
T Consensus       182 vt~n~F~~~RvlGkGGFG--EV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~  259 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFG--EVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA  259 (591)
T ss_pred             ccccceeeeEEEeccccc--ceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence            444668888999999999  9998876  677777777654431111  1234667788889999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      +.+|+..|+||+|
T Consensus       260 LClVLtlMNGGDL  272 (591)
T KOG0986|consen  260 LCLVLTLMNGGDL  272 (591)
T ss_pred             eEEEEEeecCCce
Confidence            9999999999986

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.79  E-value=1.8e-06  Score=57.73  Aligned_cols=82  Identities=16%  Similarity=0.284  Sum_probs=62.7

Q ss_pred             CCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           38 YDEREVIKQCDFYITKLYKGFWQERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      ++...+|.+..-|  ..|+|.|.+.-+..|.+.... +......|..|...++...|||++.+++.|..++.+.++..||
T Consensus       192 lnl~tkl~e~hsg--elwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m  269 (448)
T KOG0195|consen  192 LNLITKLAESHSG--ELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM  269 (448)
T ss_pred             hhhhhhhccCCCc--ccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence            3445566777778  899999955555666665432 1233456788888888899999999999999999999999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      +.|+|
T Consensus       270 p~gsl  274 (448)
T KOG0195|consen  270 PFGSL  274 (448)
T ss_pred             cchHH
Confidence            98875

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.76  E-value=0.0003  Score=41.93  Aligned_cols=75  Identities=9%  Similarity=-0.052  Sum_probs=57.1

Q ss_pred             CCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCC--CCcceeeeEEecCCccEEEEeccCC
Q 045247           41 REVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDH--KHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h--~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      .+.++.|.++  .+|+....+..+++|......  . ...+..|...+..+.+  ..+.+++......+..++++||+++
T Consensus         3 ~~~i~~g~~~--~v~~~~~~~~~~~iK~~~~~~--~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g   77 (155)
T cd05120           3 IKLLKGGLTN--RVYLLGTKDEDYVLKINPSRE--K-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG   77 (155)
T ss_pred             ceeccccccc--ceEEEEecCCeEEEEecCCCC--c-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence            4678999999  999999844678888876543  1 4567778888888775  4777777777666789999999987


Q ss_pred             CC
Q 045247          119 RT  120 (121)
Q Consensus       119 g~  120 (121)
                      +.
T Consensus        78 ~~   79 (155)
T cd05120          78 ET   79 (155)
T ss_pred             ee
Confidence            64

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.73  E-value=0.00035  Score=44.46  Aligned_cols=79  Identities=10%  Similarity=-0.051  Sum_probs=53.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCCh-h--------------------HHHHHHHHHHHHHhcCCC
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPD-S--------------------VYKYSINNIVYAAQMDHK   94 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~-~--------------------~~~~~~~~~~~l~~l~h~   94 (121)
                      -|...+.||.|.++  .||++.. ++..+++|.++..... .                    .......+...+..+.+.
T Consensus        16 ~~~~~~~i~~G~~g--~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   93 (198)
T cd05144          16 VESLGNQIGVGKES--DVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE   93 (198)
T ss_pred             hhhcCCccccCcce--EEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence            36777899999999  9999988 7889999987643200 0                    011245566677777666


Q ss_pred             C--cceeeeEEecCCccEEEEeccCCCCC
Q 045247           95 H--ILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        95 ~--~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +  +...++    ....+++|||+++++|
T Consensus        94 ~i~v~~~~~----~~~~~lv~e~~~g~~L  118 (198)
T cd05144          94 GFPVPKPID----WNRHAVVMEYIDGVEL  118 (198)
T ss_pred             CCCCCceee----cCCceEEEEEeCCcch
Confidence            3  333332    2456899999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.70  E-value=9e-06  Score=54.97  Aligned_cols=80  Identities=16%  Similarity=0.143  Sum_probs=57.3

Q ss_pred             HhcCCCc-CCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHH-HhcCCCCcceeeeEEec----
Q 045247           34 ATNNYDE-REVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYA-AQMDHKHILKLIGCCLE----  105 (121)
Q Consensus        34 ~~~~~~~-~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l-~~l~h~~~~~~~~~~~~----  105 (121)
                      .+.+|.. .++||.|..|  .|..|..  ++...++|.+...      ....+|+.+. ....|+|++++++++.+    
T Consensus        59 itedY~is~qvLG~GinG--kV~~C~~k~T~ekfALKvL~Ds------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~  130 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGING--KVVQCVHKRTQEKFALKVLLDS------PKARREVELHWMASGHPHIVSIIDVYENSYQG  130 (400)
T ss_pred             chhhheehhhhhccccCC--ceEEEEeccchhhhHHHHHhcC------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence            3445533 5788999999  9988876  6667778776543      2234555533 33459999999988864    


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      ...+.+|||+++||+|
T Consensus       131 rkcLLiVmE~meGGeL  146 (400)
T KOG0604|consen  131 RKCLLIVMECMEGGEL  146 (400)
T ss_pred             ceeeEeeeecccchHH
Confidence            4568899999999976

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=97.64  E-value=1.6e-05  Score=53.06  Aligned_cols=79  Identities=14%  Similarity=0.108  Sum_probs=63.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHH-HHhcCCCCcceeeeEEecCCccEEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVY-AAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~-l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++..+..||.|.||  .|.+=..  .+..+++|.++......+.++++.+... ++.-.-+++++++|.+-.....++-|
T Consensus        65 ~Lqdlg~iG~G~fG--~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCM  142 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFG--TVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICM  142 (361)
T ss_pred             hHHHHHHhcCCcch--hhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeH
Confidence            45567789999999  9987766  6888999999876544566778777764 44556999999999998888899999


Q ss_pred             eccC
Q 045247          114 EYGE  117 (121)
Q Consensus       114 e~~~  117 (121)
                      |.|.
T Consensus       143 ELMd  146 (361)
T KOG1006|consen  143 ELMD  146 (361)
T ss_pred             HHHh
Confidence            8764

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.59  E-value=5.8e-05  Score=56.79  Aligned_cols=75  Identities=13%  Similarity=0.321  Sum_probs=60.2

Q ss_pred             CCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEEecc
Q 045247           38 YDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      |...+.+|.|..| |.||+|.+.++.|++|++-..    ...-..+|+..+...+ |||+++.++....+.+.|+..|.+
T Consensus       511 ~~~~eilG~Gs~G-t~Vf~G~ye~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNG-TVVFRGVYEGREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             eccHHHcccCCCC-cEEEEEeeCCceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            5667788888888 468999998889999876543    2334568888888887 999999998888899999999876


Q ss_pred             C
Q 045247          117 E  117 (121)
Q Consensus       117 ~  117 (121)
                      .
T Consensus       586 ~  586 (903)
T KOG1027|consen  586 A  586 (903)
T ss_pred             h
Confidence            4

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.57  E-value=0.00024  Score=50.94  Aligned_cols=78  Identities=13%  Similarity=0.206  Sum_probs=60.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-----C---CCcceeeeEEec
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-----H---KHILKLIGCCLE  105 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-----h---~~~~~~~~~~~~  105 (121)
                      +.|.+..+||.|.|+  +||.+.+  ..+.+++|+.+..  .......+.|+.+|.+++     |   ..++++++.|..
T Consensus        78 gRY~v~rKLGWGHFS--TVWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh  153 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFS--TVWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH  153 (590)
T ss_pred             ceEEEEEeccccccc--eeEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence            457788999999999  9999998  6678999988765  344566788888888754     2   258888888853


Q ss_pred             ----CCccEEEEeccC
Q 045247          106 ----TPIPILVFEYGE  117 (121)
Q Consensus       106 ----~~~~~lv~e~~~  117 (121)
                          +..+.+|+|++.
T Consensus       154 sGpNG~HVCMVfEvLG  169 (590)
T KOG1290|consen  154 SGPNGQHVCMVFEVLG  169 (590)
T ss_pred             cCCCCcEEEEEehhhh
Confidence                467889999763

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.46  E-value=0.00014  Score=48.93  Aligned_cols=79  Identities=10%  Similarity=0.103  Sum_probs=64.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +++....-||.|..|  .|++...  .+..+++|..++.....+.++++..+.++...+ .|.+++.+|++......++-
T Consensus        92 ndl~~l~dlGsGtcG--~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic  169 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCG--QVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC  169 (391)
T ss_pred             HHhhhHHhhcCCCcc--ceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence            344456678999999  9999998  678899999988775556788998888777665 89999999999988888887


Q ss_pred             Eecc
Q 045247          113 FEYG  116 (121)
Q Consensus       113 ~e~~  116 (121)
                      ||.|
T Consensus       170 MelM  173 (391)
T KOG0983|consen  170 MELM  173 (391)
T ss_pred             HHHH
Confidence            7755

>smart00090 RIO RIO-like kinase

Probab=97.43  E-value=0.0013  Score=43.36  Aligned_cols=79  Identities=13%  Similarity=0.040  Sum_probs=53.6

Q ss_pred             CCCcCCeeecCCCccceEEEEE--e-CCeEEEEEEecCCCChh-----------------------HHHHHHHHHHHHHh
Q 045247           37 NYDEREVIKQCDFYITKLYKGF--W-QERLISVLKFDESLPDS-----------------------VYKYSINNIVYAAQ   90 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~--~-~~~~~~~k~~~~~~~~~-----------------------~~~~~~~~~~~l~~   90 (121)
                      .|...+.||+|.++  .||.+.  . .+..+++|.++......                       ....+..|...+..
T Consensus        29 ~~~i~~~Lg~G~~g--~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~  106 (237)
T smart00090       29 LSAIGGCISTGKEA--NVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR  106 (237)
T ss_pred             hHHhCCeeccCcce--eEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            47788999999999  999998  3 78899999887532100                       01234567788887


Q ss_pred             cCCCC--cceeeeEEecCCccEEEEeccCCCCC
Q 045247           91 MDHKH--ILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        91 l~h~~--~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +.+..  +.+++..    ...++||||+++++|
T Consensus       107 L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L  135 (237)
T smart00090      107 LYEAGVPVPKPIAW----RRNVLVMEFIGGDGL  135 (237)
T ss_pred             HHhcCCCCCeeeEe----cCceEEEEEecCCcc
Confidence            76532  2333322    235899999998653

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.30  E-value=0.00012  Score=49.16  Aligned_cols=82  Identities=13%  Similarity=0.172  Sum_probs=60.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeee-EEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIG-CCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~-~~~~~~~~~l  111 (121)
                      +.|+..+.+|+|.||  .+..+..  ....+++|..+...  -....|.+|.-.---+. |.+|+.-++ .+...+.-++
T Consensus        24 d~y~I~k~lgeG~Fg--kIlL~eHr~s~t~ivlKavp~p~--tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF   99 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFG--KILLAEHRQSKTRIVLKAVPRPQ--TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF   99 (378)
T ss_pred             hhhhHHHHhccccee--eEEeeeccCCceEEEeeccCcch--hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence            357788899999999  9988877  55678999887764  33456777765444444 778877654 3445566778


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||++.|+|
T Consensus       100 ~qE~aP~gdL  109 (378)
T KOG1345|consen  100 VQEFAPRGDL  109 (378)
T ss_pred             eeccCccchh
Confidence            9999999986

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.29  E-value=0.00066  Score=50.08  Aligned_cols=81  Identities=15%  Similarity=0.085  Sum_probs=49.1

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeE-----
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGC-----  102 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~-----  102 (121)
                      ..++|...+.||+|.||  .||++.+  +    +..+++|.+..... .  .....+  .+....+.+...+...     
T Consensus       130 ~~~~y~l~~~LG~G~FG--~VYka~~~~~~~~~~~~vAvK~~~~~~~-~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~  202 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFG--VVYKASLVNKQSKKEGKYVLKKATEYGA-V--EIWMNE--RVRRACPNSCADFVYGFLEPV  202 (566)
T ss_pred             ccCCeEEeEEEeeCCCe--EEEEEEEcCCccccCcEEEEEEecccch-h--HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence            45688999999999999  9999998  5    67899998765421 1  111111  0111111111111111     


Q ss_pred             -EecCCccEEEEeccCCCCC
Q 045247          103 -CLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 -~~~~~~~~lv~e~~~~g~L  121 (121)
                       .......++|+||+++++|
T Consensus       203 ~~~~~~~~~LV~ey~~~gsL  222 (566)
T PLN03225        203 SSKKEDEYWLVWRYEGESTL  222 (566)
T ss_pred             ccccCCceEEEEEecCCCcH
Confidence             2345678999999988864

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.02  E-value=0.0092  Score=38.86  Aligned_cols=77  Identities=13%  Similarity=-0.044  Sum_probs=52.8

Q ss_pred             CcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhH---HHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEEe
Q 045247           39 DEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSV---YKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        39 ~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~---~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      .+...++.+.|+  .|+.....+.++..+.+....-...   ...+.+|+.++..+. ++++.++++.    ...+++||
T Consensus         5 ~~~~~l~~~~f~--~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFG--RILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcc--eEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            455788999999  9995444556666555554321111   224778999999996 5678887764    44699999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+.+.+|
T Consensus        79 yI~G~~L   85 (218)
T PRK12274         79 YLAGAAM   85 (218)
T ss_pred             eecCccH
Confidence            9988764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.01  E-value=0.0044  Score=44.46  Aligned_cols=30  Identities=3%  Similarity=0.087  Sum_probs=26.7

Q ss_pred             CCeeecCCCccceEEEEEe-CCeEEEEEEecCC
Q 045247           41 REVIKQCDFYITKLYKGFW-QERLISVLKFDES   72 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~   72 (121)
                      .+.++.|++|  .||++.+ .|..+++|..+..
T Consensus       122 ~~plasaSig--QVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       122 EKPLAAASIA--QVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             Ccceeeeehh--heEEEEecCCCEEEEEeeCCC
Confidence            4689999999  9999999 8999999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.01  E-value=0.0018  Score=40.58  Aligned_cols=30  Identities=10%  Similarity=0.044  Sum_probs=25.5

Q ss_pred             CCeeecCCCccceEEEEEe-CCeEEEEEEecCC
Q 045247           41 REVIKQCDFYITKLYKGFW-QERLISVLKFDES   72 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~   72 (121)
                      .+.||+|.++  .||++.. .+..+++|.++..
T Consensus         2 ~~~lg~G~~g--~Vy~a~~~~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEA--DVYLALDGDGEPVAVKIYRTG   32 (187)
T ss_pred             Ccccccccce--eEEEEECCCCCEEEEEEEecC
Confidence            3578999999  9999988 6889999987754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.74  E-value=0.0049  Score=45.32  Aligned_cols=33  Identities=9%  Similarity=0.112  Sum_probs=28.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-C-CeEEEEEEecCC
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-Q-ERLISVLKFDES   72 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~-~~~~~~k~~~~~   72 (121)
                      .|+. +.++.|+++  .|+++.. . |..+++|+++..
T Consensus       121 ~fd~-~PlasaSia--QVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        121 DFDI-KPLASASIA--QVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hcCh-hhhcCCCcc--EEEEEEECCCCCEEEEEEeCcc
Confidence            4666 789999999  9999998 5 899999998754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.70  E-value=0.022  Score=37.55  Aligned_cols=81  Identities=20%  Similarity=0.259  Sum_probs=61.7

Q ss_pred             CCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChh--HHHHHHHHHHHHHhcCCC-CcceeeeEEecCCccEEEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDS--VYKYSINNIVYAAQMDHK-HILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~l~h~-~~~~~~~~~~~~~~~~lv~e  114 (121)
                      |.....+|.|.|+  .||.+... ..+++|.+.......  ....+..+...+..+.|+ +++++...+......+++++
T Consensus         2 ~~~~~~l~~g~~~--~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFG--EVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCe--EEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            4556778899999  99999875 456777776543222  356788888889999988 79999998866666799999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      ++.++++
T Consensus        79 ~~~~~~l   85 (384)
T COG0515          79 YVDGGSL   85 (384)
T ss_pred             cCCCCcH
Confidence            9988763

>PHA02882 putative serine/threonine kinase; Provisional

Probab=96.69  E-value=0.02  Score=38.49  Aligned_cols=79  Identities=14%  Similarity=0.040  Sum_probs=47.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--C---CeEEEEEEecCCCChh--HH--------HHHHHHHHHHHhcCCCCcceee
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--Q---ERLISVLKFDESLPDS--VY--------KYSINNIVYAAQMDHKHILKLI  100 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~---~~~~~~k~~~~~~~~~--~~--------~~~~~~~~~l~~l~h~~~~~~~  100 (121)
                      ..|...+.||+|.||  .||++..  .   ...+++|.........  ..        .........+..+.|++++.++
T Consensus        12 ~~y~i~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~   89 (294)
T PHA02882         12 KEWKIDKLIGCGGFG--CVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY   89 (294)
T ss_pred             CceEEeeEEecCCCc--eEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence            468889999999999  9999987  3   3345555433221000  00        1112223345567899999999


Q ss_pred             eEEecCC----ccEEEEecc
Q 045247          101 GCCLETP----IPILVFEYG  116 (121)
Q Consensus       101 ~~~~~~~----~~~lv~e~~  116 (121)
                      +++....    ..++++++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~  109 (294)
T PHA02882         90 GCGSFKRCRMYYRFILLEKL  109 (294)
T ss_pred             EeeeEecCCceEEEEEEehh
Confidence            8765433    235666654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.66  E-value=0.0011  Score=48.64  Aligned_cols=80  Identities=19%  Similarity=0.106  Sum_probs=59.5

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHH-HHHhcCCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIV-YAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~-~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      +..|.....+|.|.|+  .+-.+..  ++...++|.+....     .....++. .+..-.|+|++++.+.+......++
T Consensus       321 ~~~y~~~~~~~~gs~s--~~~~~~~~~t~~~~~vkii~~~~-----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~  393 (612)
T KOG0603|consen  321 TESYEFREELGEGSFS--AVKYCESSPTDQEPAVKIISKRA-----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL  393 (612)
T ss_pred             chhhccccccCCCCcc--ceeeeeccccccchhheeccccc-----cccccccchhhhhcCCCcceeecceecCCceeee
Confidence            4557777789999999  7777766  66677888886552     11223343 3444569999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      |||.+.++.+
T Consensus       394 v~e~l~g~el  403 (612)
T KOG0603|consen  394 VMELLDGGEL  403 (612)
T ss_pred             eehhccccHH
Confidence            9999988753

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.59  E-value=0.012  Score=37.50  Aligned_cols=78  Identities=12%  Similarity=0.026  Sum_probs=51.8

Q ss_pred             CeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCC--CcceeeeEEecC---CccEEEEec
Q 045247           42 EVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHK--HILKLIGCCLET---PIPILVFEY  115 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~--~~~~~~~~~~~~---~~~~lv~e~  115 (121)
                      +.++.|..+  .+|+... .+..+++|.............+..|...+..+.+.  .+.+++......   ...+++|||
T Consensus         4 ~~l~~G~~n--~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           4 RQLSGGQSN--LTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             eecCCCccc--eEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            567889899  9999887 54678888765432111234567777777777653  345565555443   256899999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++.++
T Consensus        82 i~G~~l   87 (223)
T cd05154          82 VDGRVL   87 (223)
T ss_pred             eCCEec
Confidence            987653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.52  E-value=0.0044  Score=42.97  Aligned_cols=77  Identities=14%  Similarity=0.032  Sum_probs=55.3

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~l  111 (121)
                      --+|.+.++||+|+||  .++.|..  ++.++++|.=...   +++..+..|.+..+.|. .+.|..++-+...+..-.|
T Consensus        27 G~hyrVGkKIGeGsFG--~lf~G~Nl~nne~VAIKfEPrk---S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL  101 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFG--VLFLGKNLYNNEPVAIKFEPRK---SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL  101 (449)
T ss_pred             cccceeccccccCcce--eeecccccccCceEEEEecccc---CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence            3479999999999999  9999987  8899999865443   34455666666666655 5667776655555666667


Q ss_pred             EEecc
Q 045247          112 VFEYG  116 (121)
Q Consensus       112 v~e~~  116 (121)
                      |+|.+
T Consensus       102 VidLL  106 (449)
T KOG1165|consen  102 VIDLL  106 (449)
T ss_pred             hhhhh
Confidence            77754

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=96.44  E-value=0.0013  Score=46.40  Aligned_cols=87  Identities=13%  Similarity=0.324  Sum_probs=59.4

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe-CCe------EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe-
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW-QER------LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL-  104 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~------~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~-  104 (121)
                      ..+..+.....+.+|.||  .||.|.| ...      .+-+|........-+...++.|.-.+..+.|+|+.++.+.+. 
T Consensus       281 v~r~Rv~l~~llqEGtFG--ri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie  358 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFG--RIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE  358 (563)
T ss_pred             hhhhheechhhhhcCchh--heeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence            334457777888899999  9999987 211      122333322221233456777777888899999999998875 


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      ....+++.+.++.-|+|
T Consensus       359 ~~~~P~V~y~~~~~gNL  375 (563)
T KOG1024|consen  359 DYATPFVLYPATGVGNL  375 (563)
T ss_pred             ccCcceEEEeccCcchH
Confidence            46789999988876653

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.37  E-value=8.5e-06  Score=54.01  Aligned_cols=81  Identities=19%  Similarity=0.285  Sum_probs=56.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecC-CCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec-------
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDE-SLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE-------  105 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~-~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-------  105 (121)
                      +.|....++|+|.|+  .|+++..  ++..+++|..-- ..-..-.-..++++.++..+.|+|++.++..|..       
T Consensus        17 ~~yek~~kigqGtfg--eVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r   94 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFG--EVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR   94 (376)
T ss_pred             hHHHHHHhcCCchHH--HHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence            345566789999999  9999877  566666654321 1000112345778899999999999999888853       


Q ss_pred             -CCccEEEEeccCC
Q 045247          106 -TPIPILVFEYGEY  118 (121)
Q Consensus       106 -~~~~~lv~e~~~~  118 (121)
                       ...+++||+++++
T Consensus        95 ~r~t~ylVf~~ceh  108 (376)
T KOG0669|consen   95 DRATFYLVFDFCEH  108 (376)
T ss_pred             ccceeeeeHHHhhh
Confidence             2348899998874

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.36  E-value=0.026  Score=34.56  Aligned_cols=74  Identities=16%  Similarity=0.005  Sum_probs=46.5

Q ss_pred             CeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcc-eeeeEEecCCccEEEEeccCCCC
Q 045247           42 EVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHIL-KLIGCCLETPIPILVFEYGEYRT  120 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~-~~~~~~~~~~~~~lv~e~~~~g~  120 (121)
                      +.++.|..+  .+|.....+..+.+|......  ........|...+..+.+..++ +++..  .....++||||+++.+
T Consensus         4 ~~l~~G~~~--~vy~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~   77 (170)
T cd05151           4 SPLKGGMTN--KNYRVEVANKKYVVRIPGNGT--ELLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSE   77 (170)
T ss_pred             eecCCcccC--ceEEEEECCeEEEEEeCCCCc--ccccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCc
Confidence            456788888  999888777778888875442  1112234566666665544433 33333  2334689999999875


Q ss_pred             C
Q 045247          121 L  121 (121)
Q Consensus       121 L  121 (121)
                      +
T Consensus        78 l   78 (170)
T cd05151          78 L   78 (170)
T ss_pred             c
Confidence            3

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.33  E-value=0.0068  Score=40.40  Aligned_cols=78  Identities=12%  Similarity=0.042  Sum_probs=54.9

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCC-CCcceeeeEEecCCccE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDH-KHILKLIGCCLETPIPI  110 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h-~~~~~~~~~~~~~~~~~  110 (121)
                      ..+.|.+.++||.|+||  .+|.+..  .|..+++|.=....   ....+.-|..+-..+++ ..+..+.-.......-.
T Consensus        13 v~gky~lvrkiGsGSFG--dIy~~~~i~~ge~VAiK~Es~~a---~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFG--DIYLGISITSGEEVAIKLESSKA---KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             eccceEEEEeecCCchh--heeeeeeccCCceEEEEeecccC---CCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence            45679999999999999  9999998  78889998654331   22345556666666663 34555555556667788


Q ss_pred             EEEecc
Q 045247          111 LVFEYG  116 (121)
Q Consensus       111 lv~e~~  116 (121)
                      +|||..
T Consensus        88 lVMdLL   93 (341)
T KOG1163|consen   88 LVMDLL   93 (341)
T ss_pred             eeeecc
Confidence            999864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=96.23  E-value=0.0057  Score=39.83  Aligned_cols=85  Identities=9%  Similarity=0.104  Sum_probs=63.6

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEE--eCCeEEEEEEecCCCChhHHHHHHHHHHHHH-hcCCCCcceeeeEEecCC
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGF--WQERLISVLKFDESLPDSVYKYSINNIVYAA-QMDHKHILKLIGCCLETP  107 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~-~l~h~~~~~~~~~~~~~~  107 (121)
                      +....+++...+.||.|.+|  .+-+-.  ..|...++|.++..-+.+..++.+.++.+.. ....|..+.++|......
T Consensus        41 ~eV~ad~L~~i~elGrGayG--~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg  118 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYG--VVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG  118 (282)
T ss_pred             cccchhhhhhhhhhcCCccc--hhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence            44455566667889999999  554333  3888999999987765566677777776544 456899999999888878


Q ss_pred             ccEEEEeccC
Q 045247          108 IPILVFEYGE  117 (121)
Q Consensus       108 ~~~lv~e~~~  117 (121)
                      ..++-||.|.
T Consensus       119 dvwIcME~M~  128 (282)
T KOG0984|consen  119 DVWICMELMD  128 (282)
T ss_pred             cEEEeHHHhh
Confidence            8899988764

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.04  E-value=0.023  Score=36.17  Aligned_cols=76  Identities=11%  Similarity=0.068  Sum_probs=51.8

Q ss_pred             CCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccC
Q 045247           38 YDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      ......|++|.++  .||.+.+.+..+++|.-+..   +....+..|...+..+....+.+=+-.+   ...++.|||+.
T Consensus        24 ~~v~~~L~KG~~s--~Vyl~~~~~~~~a~Kvrr~d---s~r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~   95 (201)
T COG2112          24 LRVEKELAKGTTS--VVYLGEWRGGEVALKVRRRD---SPRRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYID   95 (201)
T ss_pred             hhhhhhhhccccc--EEEEeeccCceEEEEEecCC---cchhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhc
Confidence            3456788999999  99999997778888876654   3456677888877776655554422222   33345599988


Q ss_pred             CCCC
Q 045247          118 YRTL  121 (121)
Q Consensus       118 ~g~L  121 (121)
                      |.+|
T Consensus        96 G~~L   99 (201)
T COG2112          96 GRPL   99 (201)
T ss_pred             Ccch
Confidence            7543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.82  E-value=0.041  Score=37.77  Aligned_cols=77  Identities=16%  Similarity=0.069  Sum_probs=53.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CC--eEEEEEEecCCCChhHHHHHHHHHHHHHhcC----CCCcceeeeEE-ecCCc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QE--RLISVLKFDESLPDSVYKYSINNIVYAAQMD----HKHILKLIGCC-LETPI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~--~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~----h~~~~~~~~~~-~~~~~  108 (121)
                      .|.....||+|.||  .||.+.. ..  ..+++|.-.... ......+..|..++..+.    .+++..++... .....
T Consensus        19 ~~~i~~~iG~G~fG--~V~~v~~~~~~~~~~a~K~e~~~~-~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~   95 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFG--AVYLVSDKSEKNKEYAKKLEKKEL-GSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF   95 (322)
T ss_pred             ceEEeeeccccCCc--eEEEEEecCCCCeeEEEEEEEecc-cCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence            78999999999999  9999998 32  356777655432 111114555666666655    35777887777 46667


Q ss_pred             cEEEEecc
Q 045247          109 PILVFEYG  116 (121)
Q Consensus       109 ~~lv~e~~  116 (121)
                      -++||+..
T Consensus        96 ~~iVM~l~  103 (322)
T KOG1164|consen   96 NFIVMSLL  103 (322)
T ss_pred             eEEEEecc
Confidence            88998854

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=95.77  E-value=0.00048  Score=49.92  Aligned_cols=85  Identities=6%  Similarity=-0.024  Sum_probs=63.3

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCC--eEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQE--RLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~--~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ..++.....+|-|.||  .|=.....+  ...++|+++..-  ...+..++.+|-.+|...+++.|++++.-+.+...+|
T Consensus       419 l~dl~~iaTLGvGgFG--RVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY  496 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFG--RVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY  496 (732)
T ss_pred             hhhhhhhhhcccCccc--eEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence            3456667788999999  876665522  235666665432  1234556777888888899999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++||-+-||+|
T Consensus       497 mLmEaClGGEl  507 (732)
T KOG0614|consen  497 MLMEACLGGEL  507 (732)
T ss_pred             hhHHhhcCchh
Confidence            99999988864

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=95.46  E-value=0.012  Score=43.23  Aligned_cols=77  Identities=13%  Similarity=0.144  Sum_probs=57.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCC------CcceeeeEEecCC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHK------HILKLIGCCLETP  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~------~~~~~~~~~~~~~  107 (121)
                      +.|.+....|+|-|+  .|..+.+  .+..+++|+++...  -..+.=+.|+.+|..|...      +.+.++..|...+
T Consensus       432 ~RY~V~~~~GkGvFs--~Vvra~D~~r~~~vAiKIIRnNE--~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn  507 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFS--TVVRARDQARGQEVAIKIIRNNE--VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN  507 (752)
T ss_pred             ceeEEEeccccceee--eeeeccccCCCCeeEEEEeecch--HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence            346666777899999  9999988  67899999998763  3445567778888877522      4566666666778


Q ss_pred             ccEEEEecc
Q 045247          108 IPILVFEYG  116 (121)
Q Consensus       108 ~~~lv~e~~  116 (121)
                      .+.||+|-+
T Consensus       508 HLClVFE~L  516 (752)
T KOG0670|consen  508 HLCLVFEPL  516 (752)
T ss_pred             eeEEEehhh
Confidence            888999854

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.20  E-value=0.0059  Score=41.40  Aligned_cols=68  Identities=12%  Similarity=0.154  Sum_probs=51.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      +..+.+.||-|.||  .||...+  .++.++.|.+..-... ...+++-+++..+.-.+|.|+.+.++.....
T Consensus        54 Di~PDRPIGYGAFG--VVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPp  124 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFG--VVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPA  124 (449)
T ss_pred             cCCCCCccccccee--EEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCC
Confidence            46678999999999  9999988  6777888876543211 1245677888899999999999988776543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=95.03  E-value=0.024  Score=39.78  Aligned_cols=78  Identities=13%  Similarity=0.149  Sum_probs=55.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCC------CcceeeeEEecC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHK------HILKLIGCCLET  106 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~------~~~~~~~~~~~~  106 (121)
                      ++.|.....+|+|.||  .|..+.+  .+..+++|+++.-  .........|+..+.++.+.      ..+.+.+.+...
T Consensus        88 ~~Ry~i~~~lGeGtFG--kV~ec~D~~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr  163 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFG--KVVECWDRETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR  163 (415)
T ss_pred             ccceehhhhhcCCccc--ceEEEeecCCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence            5668888999999999  9999988  5677888887643  23345556677778777422      134445556667


Q ss_pred             CccEEEEecc
Q 045247          107 PIPILVFEYG  116 (121)
Q Consensus       107 ~~~~lv~e~~  116 (121)
                      ....+|+|.+
T Consensus       164 ghiCivfell  173 (415)
T KOG0671|consen  164 GHICIVFELL  173 (415)
T ss_pred             CceEEEEecc
Confidence            7788888855

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=95.01  E-value=0.014  Score=45.57  Aligned_cols=86  Identities=16%  Similarity=0.222  Sum_probs=55.8

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC---CCCcceeeeEEec
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMD---HKHILKLIGCCLE  105 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~---h~~~~~~~~~~~~  105 (121)
                      +++.....|.....+|+|.+|  .||.+.. .+..+++|.-....++.    +.--.+++.+|.   -+.+..+..+...
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~--~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~  765 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYG--SVYVATHSNGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVF  765 (974)
T ss_pred             eeeecceeEEEEeeeccccce--EEEEeecCCCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHcc
Confidence            334444557778999999999  9999998 88889999866554221    111122223333   1233333444455


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      .+..++|+||.+.|+|
T Consensus       766 ~~~S~lv~ey~~~Gtl  781 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTL  781 (974)
T ss_pred             CCcceeeeeccccccH
Confidence            6778899999999986

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=94.91  E-value=0.37  Score=31.80  Aligned_cols=76  Identities=8%  Similarity=-0.125  Sum_probs=48.9

Q ss_pred             Ceee-cCCCccceEEEEEeCCeEEEEEEecCCC----------C--hhHHHHHHHHHHHHHhcCCCCc--ceeeeEEecC
Q 045247           42 EVIK-QCDFYITKLYKGFWQERLISVLKFDESL----------P--DSVYKYSINNIVYAAQMDHKHI--LKLIGCCLET  106 (121)
Q Consensus        42 ~~ig-~g~~~~~~v~~~~~~~~~~~~k~~~~~~----------~--~~~~~~~~~~~~~l~~l~h~~~--~~~~~~~~~~  106 (121)
                      ..+| .|+.+  .+|.....+..+++|.+....          .  ......+.+|...+..+.|+++  ..+++.....
T Consensus        37 ~~lg~~~g~g--tv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         37 RVVGSAKGRG--TTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             ceeecCCCCc--cEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            4576 67888  888877656667777664321          0  1123457788899999988774  5555553322


Q ss_pred             -C---ccEEEEeccCCC
Q 045247          107 -P---IPILVFEYGEYR  119 (121)
Q Consensus       107 -~---~~~lv~e~~~~g  119 (121)
                       .   ..++|+|+++++
T Consensus       115 ~~~~~~~~lV~e~l~G~  131 (239)
T PRK01723        115 HGLFYRADILIERIEGA  131 (239)
T ss_pred             cCcceeeeEEEEecCCC
Confidence             2   235999999873

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=94.76  E-value=0.064  Score=40.31  Aligned_cols=56  Identities=20%  Similarity=0.176  Sum_probs=44.1

Q ss_pred             CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           60 QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        60 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      .+.++.+....... ........+.+..++.++||+|++++.........|+|+|.+
T Consensus        36 ~~~~vsVF~~~~~~-~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV   91 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSN-GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV   91 (690)
T ss_pred             cCCceEEEEEeCCC-chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc
Confidence            66778888887664 222344566677899999999999999999888999999965

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=94.43  E-value=0.013  Score=40.24  Aligned_cols=78  Identities=17%  Similarity=0.197  Sum_probs=54.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC------C
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET------P  107 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~------~  107 (121)
                      .|.....++.|.-   .|..+.+  .++++++|...... ....+++..+|..++..+.|+|+++++.++...      .
T Consensus        18 Ry~nL~p~~~g~~---~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ---IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeecccCCCCc---eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            3555555655443   2444444  67778888765443 123467778889999999999999999999764      3


Q ss_pred             ccEEEEeccC
Q 045247          108 IPILVFEYGE  117 (121)
Q Consensus       108 ~~~lv~e~~~  117 (121)
                      ..|+|||+|.
T Consensus        95 e~y~v~e~m~  104 (369)
T KOG0665|consen   95 EVYLVMELMD  104 (369)
T ss_pred             hHHHHHHhhh
Confidence            5788999874

>PRK10593 hypothetical protein; Provisional

Probab=92.21  E-value=2.2  Score=29.18  Aligned_cols=77  Identities=9%  Similarity=-0.020  Sum_probs=48.7

Q ss_pred             CcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCC---CCcceeeeEEec---CCccEEE
Q 045247           39 DEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDH---KHILKLIGCCLE---TPIPILV  112 (121)
Q Consensus        39 ~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h---~~~~~~~~~~~~---~~~~~lv  112 (121)
                      ...+.|+.|..+  .+|.-...+..+.+|..+...   ....+..|...++.+..   ..+.++++.+..   ....++|
T Consensus        17 ~~~~~i~~G~~~--~vy~~~~~~~~~~~k~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV   91 (297)
T PRK10593         17 SRVECISEQPYA--ALWALYDSQGNPMPLMARSFS---TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL   91 (297)
T ss_pred             heeeecCCccce--eEEEEEcCCCCEEEEEecccc---cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence            445678999999  999887622344555533211   12356667777766653   346677766643   3568999


Q ss_pred             EeccCCCC
Q 045247          113 FEYGEYRT  120 (121)
Q Consensus       113 ~e~~~~g~  120 (121)
                      ||++++++
T Consensus        92 mE~i~G~~   99 (297)
T PRK10593         92 LERLRGVS   99 (297)
T ss_pred             EeccCCEe
Confidence            99998764

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=91.91  E-value=1.7  Score=28.30  Aligned_cols=77  Identities=14%  Similarity=-0.004  Sum_probs=52.1

Q ss_pred             cCCeeecCCCccceEEEEEeCCeEEEEEEecCCC---Ch----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           40 EREVIKQCDFYITKLYKGFWQERLISVLKFDESL---PD----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        40 ~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~---~~----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ....+.+|.-+  .|+.+.+.|+...+|.-....   |.    -..++..+|++.+.+.+--.+.-..-.+.+...-.+.
T Consensus        11 ~l~likQGAEA--rv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEA--RVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeecccee--eEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            55778889888  899998866666666443221   11    1246778888888877655555444455666777899


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      |||+++
T Consensus        89 ME~~~g   94 (229)
T KOG3087|consen   89 MEFIDG   94 (229)
T ss_pred             EEeccc
Confidence            999876

>PLN02876 acyl-CoA dehydrogenase

Probab=91.74  E-value=2  Score=33.61  Aligned_cols=77  Identities=10%  Similarity=-0.002  Sum_probs=48.2

Q ss_pred             CCeeecCCCccceEEEEEe-CC---eEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCc--ceeeeEEecC---CccE
Q 045247           41 REVIKQCDFYITKLYKGFW-QE---RLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHI--LKLIGCCLET---PIPI  110 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~-~~---~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~--~~~~~~~~~~---~~~~  110 (121)
                      ...++.|..+  .+|.-.. .+   ..+++++............+.+|...+..+. |.++  .+++..+...   ..+|
T Consensus        43 v~~l~gG~sn--~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f  120 (822)
T PLN02876         43 VSQFGHGQSN--PTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF  120 (822)
T ss_pred             EEEeCCCCcC--ceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence            4556778888  7887665 32   3455555443221122346778888888875 5554  5666666443   4689


Q ss_pred             EEEeccCCC
Q 045247          111 LVFEYGEYR  119 (121)
Q Consensus       111 lv~e~~~~g  119 (121)
                      +||||+++.
T Consensus       121 lVME~v~G~  129 (822)
T PLN02876        121 YIMEYLEGR  129 (822)
T ss_pred             EEEEecCCc
Confidence            999999874

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=90.38  E-value=2.9  Score=27.05  Aligned_cols=76  Identities=16%  Similarity=0.013  Sum_probs=47.4

Q ss_pred             eeecCCCccceEEEEEeCCeEEEEEEecCCC---Ch----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           43 VIKQCDFYITKLYKGFWQERLISVLKFDESL---PD----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~---~~----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      .+.+|.=+  .++...+.+.++.+|.-....   +.    -...+..+|..++..+..-.+....-....++...++|||
T Consensus         3 ~i~~GAEa--~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           3 LIKQGAEA--IIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             hhhCCcce--eEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            34566666  677775544445555432211   11    1135667888888887766665555566677888899999


Q ss_pred             cCCCC
Q 045247          116 GEYRT  120 (121)
Q Consensus       116 ~~~g~  120 (121)
                      +++..
T Consensus        81 I~G~~   85 (204)
T COG3642          81 IEGEL   85 (204)
T ss_pred             eCChh
Confidence            98753

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=90.18  E-value=0.66  Score=34.53  Aligned_cols=65  Identities=11%  Similarity=0.108  Sum_probs=45.3

Q ss_pred             eEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec----CCccEEEEeccCC
Q 045247           53 KLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE----TPIPILVFEYGEY  118 (121)
Q Consensus        53 ~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~----~~~~~lv~e~~~~  118 (121)
                      ..|++..  +|..+++|+++.... ........-+..++++.|.|++++..++..    ...+.+||+|.++
T Consensus       291 Ttyk~~s~~DG~~YvLkRlhg~r~-~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~  361 (655)
T KOG3741|consen  291 TTYKATSNVDGNAYVLKRLHGDRD-QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS  361 (655)
T ss_pred             eeEeeeeccCCceeeeeeeccccc-cCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence            5677776  777888998854321 111122333566889999999999998873    3567899999875

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.41  E-value=4  Score=27.53  Aligned_cols=74  Identities=14%  Similarity=-0.005  Sum_probs=44.7

Q ss_pred             CeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCC---CCcceeeeEEecCCccEEEEeccCC
Q 045247           42 EVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDH---KHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h---~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      +.+..|...  ..|.-.+...++-+|+-+..    ...-+..|+.-|..|..   ..+.+++..-......|+|+||++.
T Consensus        22 ~~v~gG~in--ea~~v~dg~~~~FvK~n~~~----~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~   95 (286)
T COG3001          22 EEVSGGDIN--EAWRLRDGTDPFFVKCNQRE----QLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPT   95 (286)
T ss_pred             cccCCcccc--ceeEeecCCcceEEEecchh----hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccC
Confidence            445556666  65655544445556653322    23445555555554443   4466666666778899999999987


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |.+
T Consensus        96 ~~~   98 (286)
T COG3001          96 GPL   98 (286)
T ss_pred             CCC
Confidence            653

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=87.89  E-value=3  Score=27.27  Aligned_cols=72  Identities=4%  Similarity=-0.161  Sum_probs=46.6

Q ss_pred             CCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCC--cceeeeEEecCCccEEEEeccCC
Q 045247           41 REVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKH--ILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~--~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      ...|++|.-+  .+|+..  +....+|..+...   .......|...+..+....  +.+++..........++||+++|
T Consensus         6 ~~~i~~G~t~--~~y~~~--~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         6 WTQTGEGGNG--ESYTHK--TGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             heeecCCCCc--ceeEec--CCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            3678899998  898742  3345566655432   2344567777777665333  45666666666667889999988


Q ss_pred             C
Q 045247          119 R  119 (121)
Q Consensus       119 g  119 (121)
                      .
T Consensus        79 ~   79 (226)
T TIGR02172        79 K   79 (226)
T ss_pred             c
Confidence            5

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=86.25  E-value=7  Score=25.52  Aligned_cols=64  Identities=5%  Similarity=-0.187  Sum_probs=38.3

Q ss_pred             eEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEEeccCCCC
Q 045247           53 KLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEYRT  120 (121)
Q Consensus        53 ~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~e~~~~g~  120 (121)
                      .||+....+....+|......    ......|...+..+. +--+.+++.........++|||+++|.+
T Consensus        14 ~v~~~~~~~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~   78 (244)
T cd05150          14 TVYRLDGKNPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVP   78 (244)
T ss_pred             eEEEEcCCCCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCcc
Confidence            677775544566677655431    223445565555543 2334466666655567899999998864

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=85.30  E-value=9.7  Score=26.09  Aligned_cols=75  Identities=15%  Similarity=-0.029  Sum_probs=41.0

Q ss_pred             CcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC---CCCcceeeeEEecCCccEEEEec
Q 045247           39 DEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMD---HKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        39 ~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~---h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      .....++.|..+  ..|+-...+..+-+|.-....    ..-+..|...|+.+.   .-.+.++++.....+..+|++||
T Consensus        20 ~~~~~v~GG~i~--~a~~~~~~~~~~FvK~~~~~~----~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~   93 (288)
T PF03881_consen   20 TSIEPVSGGDIN--EAYRLDTDGGSYFVKVNSESG----RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEF   93 (288)
T ss_dssp             -EEEEE--SSSS--EEEEEETTS-EEEEEEEEGGG----CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-
T ss_pred             eeeEecCCCChh--heEEEECCCccEEEEecChhh----HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEe
Confidence            344667888888  887766566777788765321    123445555555553   33566777777767778999999


Q ss_pred             cCCC
Q 045247          116 GEYR  119 (121)
Q Consensus       116 ~~~g  119 (121)
                      ++.+
T Consensus        94 l~~~   97 (288)
T PF03881_consen   94 LEMG   97 (288)
T ss_dssp             ----
T ss_pred             ecCC
Confidence            8765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=83.99  E-value=0.7  Score=27.17  Aligned_cols=30  Identities=7%  Similarity=0.027  Sum_probs=26.2

Q ss_pred             CCeeecCCCccceEEEEEe-CCeEEEEEEecCC
Q 045247           41 REVIKQCDFYITKLYKGFW-QERLISVLKFDES   72 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~   72 (121)
                      .+.|+.++.+  .|+++.+ .|..+++|..+..
T Consensus        16 ~~PlasASia--QVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   16 PEPLASASIA--QVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             cchhhheehh--hheeeeecccchhhhhhcchH
Confidence            3688999999  9999999 8899999988764

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=81.69  E-value=0.93  Score=33.57  Aligned_cols=95  Identities=12%  Similarity=0.153  Sum_probs=59.4

Q ss_pred             ccccHHH-HHHHhcCCCcCCeeecCCCccceEEEEEe---CCeEEEEEEecCCCChhH-HHHHHHHHHHHHhcC-CCCcc
Q 045247           24 RIFSAKE-LEIATNNYDEREVIKQCDFYITKLYKGFW---QERLISVLKFDESLPDSV-YKYSINNIVYAAQMD-HKHIL   97 (121)
Q Consensus        24 ~~~~~~~-~~~~~~~~~~~~~ig~g~~~~~~v~~~~~---~~~~~~~k~~~~~~~~~~-~~~~~~~~~~l~~l~-h~~~~   97 (121)
                      +.|..++ ....+.+|.....||.+.|+  .++....   .+..+++|.+....+... ...-..++.+...+. |.+.+
T Consensus       252 ~i~~~~~~~s~~~~df~~v~~i~~~~~~--~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~  329 (524)
T KOG0601|consen  252 NIFTTSDWTSCKLTDFGLVSKISDGNFS--SVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSV  329 (524)
T ss_pred             heecccccceeecCCcceeEEccCCccc--cceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccC
Confidence            3344444 34455678889999999999  8887765   456677776655432211 111233344444443 67777


Q ss_pred             eeeeEEecCCccEEEEeccCCCC
Q 045247           98 KLIGCCLETPIPILVFEYGEYRT  120 (121)
Q Consensus        98 ~~~~~~~~~~~~~lv~e~~~~g~  120 (121)
                      .....+...+..++--||+++++
T Consensus       330 g~~~~W~~~r~~~ip~e~~~~~s  352 (524)
T KOG0601|consen  330 GKNSSWSQLRQGYIPLEFCEGGS  352 (524)
T ss_pred             CCCCCccccccccCchhhhcCcc
Confidence            76667777777778888888765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	121
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-08
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-07
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	9e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-04
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-04
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	5e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	9e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 23/107 (21%)

Query: 24  RIFSAKELEIATNNYDEREVIKQCDFYITKL--------YKGFWQERLISVLKFDESLPD 75
             FS  EL+  TNN+DER +    +    K+        YKG+     ++V K    L  
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGN----KMGEGGFGVVYKGYVNNTTVAVKK----LAA 64

Query: 76  SVYKYS-------INNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
            V   +          I   A+  H+++++L+G   +     LV+ Y
Sbjct: 65  MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 4   NGATVLKELIASSHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE-R 62
                + + ++SS+            +LE ATNN+D + +I    F   K+YKG  ++  
Sbjct: 7   KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVF--GKVYKGVLRDGA 64

Query: 63  LISVLKFDESLPDSV--YKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
            +++ +     P+S    +     I   +   H H++ LIG C E    IL+++Y
Sbjct: 65  KVALKRRT---PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 8/94 (8%)

Query: 26  FSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNI 85
              + L   +      EV  +  F    ++K       ++V  F     D     +   +
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRF--GCVWKAQLLNEYVAVKIFPIQ--DKQSWQNEYEV 69

Query: 86  VYAAQMDHKHILKLIGCCLETPIP----ILVFEY 115
                M H++IL+ IG             L+  +
Sbjct: 70  YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 35/109 (32%)

Query: 24  RIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDS----VYK 79
           + FS +EL++A++N+  + ++ +  F   K+YKG               L D     V +
Sbjct: 18  KRFSLRELQVASDNFSNKNILGRGGF--GKVYKGR--------------LADGTLVAVKR 61

Query: 80  YSINN-------------IVYAAQMDHKHILKLIGCCLETPIPILVFEY 115
                             ++  A   H+++L+L G C+     +LV+ Y
Sbjct: 62  LKEERTQGGELQFQTEVEMISMAV--HRNLLRLRGFCMTPTERLLVYPY 108

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 42.5 bits (100), Expect = 6e-06
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 21/101 (20%)

Query: 26  FSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDS------VYK 79
            +A E  +  +N    E+I +  +    +YKG   ER ++V  F  +   +      +Y+
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRY--GAVYKGSLDERPVAVKVFSFANRQNFINEKNIYR 60

Query: 80  YSINNIVYAAQMDHKHILKLIGCCLETPIPI-----LVFEY 115
                      M+H +I + I               LV EY
Sbjct: 61  VP--------LMEHDNIARFIVGDERVTADGRMEYLLVMEY 93

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
           A +D+ H+ +L+G CL + + + + +   +  L
Sbjct: 72  ASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCL 103

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEY 118
             +DH HI++L+G C  + + + V +Y   
Sbjct: 70  GSLDHAHIVRLLGLCPGSSLQL-VTQYLPL 98

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 7/30 (23%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEY 118
           A +D+ H+ +L+G CL + + + + +   +
Sbjct: 72  ASVDNPHVCRLLGICLTSTVQL-ITQLMPF 100

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEY 118
           A+ D+ +I+KL+G C       L+FEY  Y
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 134

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 90  QMDHKHILKLIGCCLETPIPIL-VFEYGEY 118
              H ++L L+G CL +    L V  Y ++
Sbjct: 146 DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 175

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 1/27 (3%)

Query: 90  QMDHKHILKLIGCCLETPIPIL-VFEY 115
              H ++L L+G CL +    L V  Y
Sbjct: 82  DFSHPNVLSLLGICLRSEGSPLVVLPY 108

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 1/27 (3%)

Query: 90  QMDHKHILKLIGCCLET-PIPILVFEY 115
            ++H ++L LIG  L    +P ++  Y
Sbjct: 78  GLNHPNVLALIGIMLPPEGLPHVLLPY 104

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 4/26 (15%), Positives = 14/26 (53%)

Query: 90  QMDHKHILKLIGCCLETPIPILVFEY 115
           + +  H+++L+G   +    +++ E 
Sbjct: 84  EFNCHHVVRLLGVVSQGQPTLVIMEL 109

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 37.1 bits (86), Expect = 6e-04
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEY 115
            Q DH HI+KLIG   E P+ I + E 
Sbjct: 446 RQFDHPHIVKLIGVITENPVWI-IMEL 471

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 90  QMDHKHILKLIGCCLETPIPILVFEYGEY 118
           Q++H H++KL G C +    +L+ EY +Y
Sbjct: 82  QVNHPHVIKLYGACSQDGPLLLIVEYAKY 110

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	121
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.66
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.65
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.65
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.64
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.6
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.6
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.56
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.56
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.56
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.54
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.53
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.53
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.52
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.48
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.47
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.45
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.43
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.42
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.4
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.4
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.38
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.37
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.36
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.35
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.34
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.33
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.33
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.33
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.32
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.32
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.32
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.32
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.31
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.31
3uqc_A	286	Probable conserved transmembrane protein; structur	99.31
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.3
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.3
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.3
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.3
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.29
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.29
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.28
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.28
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.27
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.27
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.26
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.26
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.26
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.25
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.25
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.25
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.25
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.25
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.25
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.24
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.24
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.24
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.24
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.24
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.24
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.24
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.23
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.22
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.22
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.22
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.21
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.21
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.21
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.21
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.21
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.21
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.21
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.21
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.2
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.2
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.2
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.2
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.2
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.2
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.2
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.2
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.19
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.19
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.19
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.19
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.19
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.19
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.19
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.18
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.18
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.18
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.18
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.18
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.18
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.18
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.18
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.17
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.17
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.17
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.17
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.16
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.16
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.16
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.16
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.16
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.16
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.16
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.15
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.15
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.15
3bhy_A	283	Death-associated protein kinase 3; death associate	99.15
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.15
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.15
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.15
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.14
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.14
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.14
3niz_A	311	Rhodanese family protein; structural genomics, str	99.14
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.14
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.14
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.14
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.13
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.13
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.12
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.12
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.12
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.12
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.1
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.1
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.1
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.1
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.1
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.1
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.1
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.1
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.1
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.09
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.09
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.09
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.09
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.07
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.07
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.07
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.06
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.06
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.03
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.03
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.03
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.02
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.02
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.02
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.02
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.01
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.01
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.01
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.99
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.99
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.99
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.99
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.98
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.98
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.98
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.95
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.95
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.93
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.93
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.91
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.9
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.9
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.9
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.89
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.89
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.89
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.88
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.88
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.87
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.87
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.87
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.86
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.86
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.86
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.84
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.81
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.8
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.79
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.78
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.75
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.74
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.74
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.73
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.72
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.7
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.69
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.69
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.67
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.65
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.65
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.65
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.65
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.64
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.63
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.63
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.61
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.58
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.57
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.56
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.55
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.55
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.53
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.15
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.75
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.73
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.33
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.87
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	96.35
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.27
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.17
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	93.25
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.87
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	91.04
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	90.32
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	88.74
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	82.75
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	81.15

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.66  E-value=3.3e-16  Score=104.69  Aligned_cols=84  Identities=24%  Similarity=0.358  Sum_probs=71.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .++|...+.||+|.||  .||++.+       .+..+++|.++... ......+.+|+.+++.++|||++++++++...+
T Consensus        12 r~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~   88 (299)
T 4asz_A           12 RHNIVLKRELGEGAFG--KVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD   88 (299)
T ss_dssp             GGGEEEEEEEEC--CC--CEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             HHHeEEeeEEeeCCCc--EEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence            3467788999999999  9999986       25679999998654 444678999999999999999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        89 ~~~lV~Ey~~~G~L  102 (299)
T 4asz_A           89 PLIMVFEYMKHGDL  102 (299)
T ss_dssp             SEEEEEECCTTCBH
T ss_pred             EEEEEEEcCCCCcH
Confidence            99999999999985

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.65  E-value=5.5e-16  Score=104.83  Aligned_cols=83  Identities=20%  Similarity=0.308  Sum_probs=72.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      .++...+.||+|.||  .||++.+       ++..+++|.++... ......+.+|+.+++.++|||++++++++.....
T Consensus        41 ~d~~l~~~LG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~  117 (329)
T 4aoj_A           41 RDIVLKWELGEGAFG--KVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP  117 (329)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             HHeEEEEEEccCCCc--EEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            456777899999999  9999986       25779999998654 4456789999999999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus       118 ~~lV~Ey~~~G~L  130 (329)
T 4aoj_A          118 LLMVFEYMRHGDL  130 (329)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             EEEEEEcCCCCcH
Confidence            9999999999985

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.65  E-value=6e-16  Score=103.81  Aligned_cols=83  Identities=17%  Similarity=0.281  Sum_probs=70.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ++...+.||+|.||  .||+|.+       .+..+++|.++..........+.+|+.+++.++|||++++++++......
T Consensus        27 ~~~~~~~lG~G~fG--~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  104 (308)
T 4gt4_A           27 AVRFMEELGEDRFG--KVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL  104 (308)
T ss_dssp             GEEEEEEEEECSSC--EEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HCeEeeEeccCCCc--EEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence            45667889999999  9999986       24679999997654333467899999999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus       105 ~lV~Ey~~~G~L  116 (308)
T 4gt4_A          105 SMIFSYCSHGDL  116 (308)
T ss_dssp             EEEEECCSSCBH
T ss_pred             EEEEEcCCCCcH
Confidence            999999999985

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.64  E-value=7.9e-16  Score=104.72  Aligned_cols=84  Identities=19%  Similarity=0.136  Sum_probs=69.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+.+++.++|||++++++++.....+|+|
T Consensus        24 e~Y~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFG--KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             CCEEEEEEC--------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cceEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            478889999999999  9999998  78899999997654 234467789999999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus       102 mEy~~gg~L  110 (350)
T 4b9d_A          102 MDYCEGGDL  110 (350)
T ss_dssp             EECCTTCBH
T ss_pred             EeCCCCCcH
Confidence            999999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.60  E-value=1.5e-15  Score=105.57  Aligned_cols=83  Identities=17%  Similarity=0.146  Sum_probs=73.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..|...+.||+|.||  .||++..  ++..+|+|.+.... ......+.+|+.+|+.++||||+++++++...+.+|+||
T Consensus       151 ~~y~~~~~iG~G~fG--~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          151 SYLDNFIKIGEGSTG--IVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             GTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeeEeccCcCc--EEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence            458889999999999  9999998  78999999997653 223456889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       228 Ey~~gG~L  235 (423)
T 4fie_A          228 EFLEGGAL  235 (423)
T ss_dssp             ECCTTEEH
T ss_pred             eCCCCCcH
Confidence            99999875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.60  E-value=9e-16  Score=104.30  Aligned_cols=83  Identities=17%  Similarity=0.146  Sum_probs=72.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..|...+.||+|.||  .||++..  ++..+++|.++... ......+.+|+.+++.++|||++++++++...+.+|+||
T Consensus        74 ~~y~~~~~iG~G~fG--~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm  150 (346)
T 4fih_A           74 SYLDNFIKIGEGSTG--IVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  150 (346)
T ss_dssp             GTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEEeEEeecCcCe--EEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            458888999999999  9999998  78899999997543 122455788999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       151 Ey~~gg~L  158 (346)
T 4fih_A          151 EFLEGGAL  158 (346)
T ss_dssp             CCCTTEEH
T ss_pred             eCCCCCcH
Confidence            99999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.56  E-value=8.4e-15  Score=97.85  Aligned_cols=84  Identities=8%  Similarity=0.164  Sum_probs=69.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC------
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP------  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~------  107 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.++..........+.+|+.+++.++|||++++++++...+      
T Consensus         5 ~dy~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~   82 (299)
T 4g31_A            5 TDFEPIQCLGRGGFG--VVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ   82 (299)
T ss_dssp             HHEEEEEEEEECC----EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred             hhCEEeeEEecCCCe--EEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence            358888999999999  9999998  788999999976543344577899999999999999999999986533      


Q ss_pred             ------ccEEEEeccCCCCC
Q 045247          108 ------IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ------~~~lv~e~~~~g~L  121 (121)
                            .+++||||+++|+|
T Consensus        83 ~~~~~~~l~ivmE~~~gg~L  102 (299)
T 4g31_A           83 PSSPKVYLYIQMQLCRKENL  102 (299)
T ss_dssp             ----CEEEEEEEECCCSCCH
T ss_pred             ccCCCcEEEEEEecCCCCcH
Confidence                  36899999999975

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.56  E-value=1.8e-15  Score=101.47  Aligned_cols=84  Identities=11%  Similarity=0.143  Sum_probs=73.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.+.....  ......+.+|+.+++.++|||++++++++...+..|+
T Consensus        32 ~dy~i~~~lG~G~fg--~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           32 EDFKFGKILGEGSFS--TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             GGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccEEEEEEecccCe--EEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            469999999999999  9999998  788999999975320  1224678899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       110 vmEy~~gG~L  119 (311)
T 4aw0_A          110 GLSYAKNGEL  119 (311)
T ss_dssp             EECCCTTEEH
T ss_pred             EEecCCCCCH
Confidence            9999999875

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.56  E-value=8.8e-15  Score=99.78  Aligned_cols=94  Identities=14%  Similarity=0.271  Sum_probs=78.0

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--C-----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCC-CCcc
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFW--Q-----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDH-KHIL   97 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h-~~~~   97 (121)
                      +..+.|+...++|...+.||+|.||  .||++.+  .     +..+++|.+...........+.+|+.++..+.| +|++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG--~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV  131 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV  131 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSE--EEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCcccEecHHHeEEeeEEecCCCe--EEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence            3456777888899999999999999  9999987  1     257999999876544556789999999999975 8999


Q ss_pred             eeeeEEec-CCccEEEEeccCCCCC
Q 045247           98 KLIGCCLE-TPIPILVFEYGEYRTL  121 (121)
Q Consensus        98 ~~~~~~~~-~~~~~lv~e~~~~g~L  121 (121)
                      +++++|.. ...+++||||+++|+|
T Consensus       132 ~l~g~~~~~~~~~~iV~Ey~~~G~L  156 (353)
T 4ase_A          132 NLLGACTKPGGPLMVIVEFCKFGNL  156 (353)
T ss_dssp             CEEEEECCTTSCCEEEEECCTTEEH
T ss_pred             EEEEEEEecCCEEEEEEEcCCCCCH
Confidence            99999865 4568999999999975

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.54  E-value=1.3e-14  Score=97.23  Aligned_cols=87  Identities=20%  Similarity=0.234  Sum_probs=71.4

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      |+...+++...+.||+|.||  .||++.+.+ .+++|.++... .......+.+|+.+++.++|||++++++++.. +.+
T Consensus        31 Wei~~~~l~l~~~iG~G~fG--~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~  106 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFG--TVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNL  106 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSS--EEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSC
T ss_pred             cEEcHHHeEEeeEEeeCCCc--EEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeE
Confidence            34455678888999999999  999998743 47999887543 23446789999999999999999999998754 678


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus       107 ~iVmEy~~gGsL  118 (307)
T 3omv_A          107 AIVTQWCEGSSL  118 (307)
T ss_dssp             EEEEECCSSCBH
T ss_pred             EEEEEcCCCCCH
Confidence            999999999985

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.53  E-value=2.1e-14  Score=95.58  Aligned_cols=81  Identities=16%  Similarity=0.126  Sum_probs=67.8

Q ss_pred             CcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec----CCccEE
Q 045247           39 DEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE----TPIPIL  111 (121)
Q Consensus        39 ~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~----~~~~~l  111 (121)
                      ...+.||+|.||  .||++.+  ++..+++|.+.... .......+.+|+.+++.++|||++++++++..    ...+++
T Consensus        29 ~~~~~iG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l  106 (290)
T 3fpq_A           29 KFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EeeeEEecCcCc--EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence            455679999999  9999998  68889999987543 23446779999999999999999999998864    345899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       107 vmEy~~gg~L  116 (290)
T 3fpq_A          107 VTELMTSGTL  116 (290)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCCH
Confidence            9999999985

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.53  E-value=2.3e-14  Score=95.85  Aligned_cols=81  Identities=21%  Similarity=0.273  Sum_probs=64.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----ccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----IPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----~~~lv  112 (121)
                      ++...+.||+|.||  .||++.+.+..+++|.+....  ........|+..+..++|||++++++++...+    ..++|
T Consensus         4 ~i~L~~~iG~G~fG--~Vy~~~~~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            4 TIVLQESIGKGRFG--EVWRGKWRGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEEECSSS--EEEEEEETTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCe--EEEEEEECCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            46777899999999  999999988999999987542  22222334555667889999999999997543    47999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~Ey~~~gsL   88 (303)
T 3hmm_A           80 SDYHEHGSL   88 (303)
T ss_dssp             EECCTTCBH
T ss_pred             ecCCCCCcH
Confidence            999999986

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.52  E-value=3.6e-14  Score=93.83  Aligned_cols=82  Identities=18%  Similarity=0.275  Sum_probs=66.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.++....  ......+.+|+.+++.++|||++++++++...+..++
T Consensus        13 g~Y~i~~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i   90 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFG--KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM   90 (275)
T ss_dssp             -CCEEEEEEEC---C--CEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             eCeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            689999999999999  9999998  788999999976531  1224678899999999999999999999999999999


Q ss_pred             EEeccCCCC
Q 045247          112 VFEYGEYRT  120 (121)
Q Consensus       112 v~e~~~~g~  120 (121)
                      ||||+. |+
T Consensus        91 vmEy~~-g~   98 (275)
T 3hyh_A           91 VIEYAG-NE   98 (275)
T ss_dssp             EEECCC-EE
T ss_pred             EEeCCC-CC
Confidence            999984 44

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.48  E-value=1.5e-13  Score=98.92  Aligned_cols=83  Identities=12%  Similarity=0.088  Sum_probs=74.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.+.... ......+.+|+.+|+.++|||++++++++.....+++||
T Consensus       157 ~~Y~i~~~lG~G~fg--~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~  233 (573)
T 3uto_A          157 DHYDIHEELGTGAFG--VVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  233 (573)
T ss_dssp             GTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEeeccCe--EEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            578889999999999  9999998  78899999987654 344567889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       234 E~~~gg~L  241 (573)
T 3uto_A          234 EFMSGGEL  241 (573)
T ss_dssp             ECCCCCBH
T ss_pred             eecCCCcH
Confidence            99999975

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.47  E-value=4.7e-14  Score=95.57  Aligned_cols=78  Identities=17%  Similarity=0.113  Sum_probs=67.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.++....      ..+|+.+++.++|||++++++++...+.+|+||
T Consensus        58 ~~~~~~~~lG~G~fG--~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm  129 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFG--EVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM  129 (336)
T ss_dssp             TEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheEeCcEeccCCCe--EEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            446667789999999  9999998  788999999976531      135888999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       130 Ey~~gg~L  137 (336)
T 4g3f_A          130 ELLEGGSL  137 (336)
T ss_dssp             CCCTTCBH
T ss_pred             eccCCCcH
Confidence            99999985

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.45  E-value=1.6e-12  Score=86.21  Aligned_cols=100  Identities=25%  Similarity=0.375  Sum_probs=85.0

Q ss_pred             CCCcccccHHHHHHHhcCCCcC------CeeecCCCccceEEEEEeCCeEEEEEEecCCC---ChhHHHHHHHHHHHHHh
Q 045247           20 YNPYRIFSAKELEIATNNYDER------EVIKQCDFYITKLYKGFWQERLISVLKFDESL---PDSVYKYSINNIVYAAQ   90 (121)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~------~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~   90 (121)
                      ..+...|++.++..++++|+..      +.||+|.||  .||++...+..+++|.+....   .......+.+|+..+..
T Consensus         9 ~~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~   86 (307)
T 2nru_A            9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFG--VVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAK   86 (307)
T ss_dssp             --CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSE--EEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHcccccccccccCCccccCCCe--EEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHh
Confidence            4456789999999999999887      899999999  999998877889999886532   12335678899999999


Q ss_pred             cCCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           91 MDHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        91 l~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++|+|++++++++......+++|||+++|+|
T Consensus        87 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  117 (307)
T 2nru_A           87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSL  117 (307)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             cCCCCeEEEEEEEecCCceEEEEEecCCCcH
Confidence            9999999999999998999999999998864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.43  E-value=1.3e-14  Score=97.11  Aligned_cols=84  Identities=13%  Similarity=0.075  Sum_probs=65.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ++|...+.||+|.||  .||++..     .+..+++|.++.... ......+..|+.+++.++|||++++++++......
T Consensus        24 ~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~  101 (304)
T 3ubd_A           24 SQFELLKVLGQGSFG--KVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL  101 (304)
T ss_dssp             GGEEEEEEEECGGGC--EEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred             cccEEEEEEecCCCe--EEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence            468999999999999  9999975     357899999875421 11233577889999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus       102 ~ivmEy~~gg~L  113 (304)
T 3ubd_A          102 YLILDFLRGGDL  113 (304)
T ss_dssp             EEEECCCTTCEE
T ss_pred             EEEEEcCCCCCH
Confidence            999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.42  E-value=2.9e-13  Score=90.57  Aligned_cols=99  Identities=22%  Similarity=0.434  Sum_probs=83.3

Q ss_pred             CCcccccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCccee
Q 045247           21 NPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKL   99 (121)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~   99 (121)
                      .....|+..++....++|...+.||+|.||  .||++.. .+..+++|.+...........+..++..+..++|+|++++
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFG--KVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSS--EEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCc--EEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence            345668899999999999999999999999  9999988 7888999998765312223367889999999999999999


Q ss_pred             eeEEecCCccEEEEeccCCCCC
Q 045247          100 IGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       100 ~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++.+......++||||+++|+|
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L  114 (326)
T 3uim_A           93 RGFCMTPTERLLVYPYMANGSV  114 (326)
T ss_dssp             CEEECCSSCCEEEEECCTTCBH
T ss_pred             EEEEecCCceEEEEEeccCCCH
Confidence            9999999999999999998864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.40  E-value=4.8e-13  Score=89.49  Aligned_cols=93  Identities=28%  Similarity=0.362  Sum_probs=79.9

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      ++..++...+++|...+.||+|.||  .||++.. .+..+++|.+.... ......+.+|+..+..++|+|++++++.+.
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  105 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFG--KVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCD  105 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSS--EEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred             ecHHHHHHHHhccCccceeecCCCe--eEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            4455556677899999999999999  9999998 78899999887654 344567889999999999999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....++||||+++|+|
T Consensus       106 ~~~~~~lv~e~~~~~~L  122 (321)
T 2qkw_B          106 ERNEMILIYKYMENGNL  122 (321)
T ss_dssp             CTTCCEEEEECCTTCBT
T ss_pred             CCCeEEEEEEcCCCCcH
Confidence            98999999999998875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.40  E-value=1.3e-12  Score=90.37  Aligned_cols=81  Identities=11%  Similarity=0.139  Sum_probs=68.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEec------C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLE------T  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~------~  106 (121)
                      +.|...+.||+|.||  .||++..  ++..+|+|.++.... ......+.+|+.+|+.++|||++++++++..      .
T Consensus        54 ~~Y~~~~~lG~G~fG--~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~  131 (398)
T 4b99_A           54 DEYEIIETIGNGAYG--VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF  131 (398)
T ss_dssp             SSEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred             CCeEEEEEEecccCe--EEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence            358888999999999  9999998  789999999976532 2345678899999999999999999998754      3


Q ss_pred             CccEEEEeccCC
Q 045247          107 PIPILVFEYGEY  118 (121)
Q Consensus       107 ~~~~lv~e~~~~  118 (121)
                      ..+|+||||+++
T Consensus       132 ~~~~ivmE~~~g  143 (398)
T 4b99_A          132 KSVYVVLDLMES  143 (398)
T ss_dssp             CCEEEEEECCSE
T ss_pred             CEEEEEEeCCCC
Confidence            578999999964

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.38  E-value=1.7e-13  Score=95.92  Aligned_cols=89  Identities=15%  Similarity=0.204  Sum_probs=74.9

Q ss_pred             HHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           28 AKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        28 ~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      .+.+....++|...+.||+|.||  .||++.+ .+..+++|.+....  .....+.+|+.+++.++|+|++++++++.. 
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-  250 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFG--EVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-  250 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSC--EEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             ccccccChhHceeeeeecCCCCe--EEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-
Confidence            44555566778889999999999  9999999 66779999987653  234678899999999999999999998865 


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus       251 ~~~~iv~e~~~~gsL  265 (452)
T 1fmk_A          251 EPIYIVTEYMSKGSL  265 (452)
T ss_dssp             SSCEEEECCCTTCBH
T ss_pred             CceEEEehhhcCCCH
Confidence            778999999999875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.37  E-value=1.7e-12  Score=88.77  Aligned_cols=84  Identities=11%  Similarity=0.122  Sum_probs=70.9

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecC
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLET  106 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~  106 (121)
                      ...+.|...+.||+|.||  .||++..     .+..+++|.+....   ....+.+|+..+..+ +|+|++++++++...
T Consensus        18 ~l~~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFS--SVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGGGTCEEEEEEEECSSE--EEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred             CccCcEEEEEEEecccCc--EEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence            345679999999999999  9999975     35679999886543   345677889989887 599999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      +..++||||+++|+|
T Consensus        93 ~~~~lvmE~~~g~~L  107 (361)
T 4f9c_A           93 DHVVIAMPYLEHESF  107 (361)
T ss_dssp             TEEEEEEECCCCCCH
T ss_pred             CEEEEEEeCCCcccH
Confidence            999999999999875

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.36  E-value=2.7e-12  Score=86.07  Aligned_cols=95  Identities=13%  Similarity=0.090  Sum_probs=79.2

Q ss_pred             ccccHHHHHHHhcC----------CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc
Q 045247           24 RIFSAKELEIATNN----------YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM   91 (121)
Q Consensus        24 ~~~~~~~~~~~~~~----------~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l   91 (121)
                      +.++++++..++..          |...+.||+|.||  .||++..  .+..+++|.+.... ......+.+|+..+..+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g--~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l   99 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTG--IVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDY   99 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTC
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCe--EEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhC
Confidence            45788888777754          5566789999999  9999998  68899999987654 23456788999999999


Q ss_pred             CCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           92 DHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        92 ~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +|+|++++++.+......++||||+++|+|
T Consensus       100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L  129 (321)
T 2c30_A          100 QHFNVVEMYKSYLVGEELWVLMEFLQGGAL  129 (321)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred             CCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence            999999999999999999999999998864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.34  E-value=3.3e-12  Score=85.33  Aligned_cols=92  Identities=16%  Similarity=0.247  Sum_probs=76.3

Q ss_pred             HHHHHHHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           28 AKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        28 ~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      .+.+....++|...+.||+|.||  .||++...+..+++|.+.... .......+.+|+..+..++|+|++++++.+...
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g--~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  106 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFG--TVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP  106 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSE--EEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             cccccCChhHceeeeEeecCCCe--EEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            34444555678889999999999  999998888889999987654 233356788999999999999999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus       107 ~~~~lv~e~~~~~~L  121 (309)
T 3p86_A          107 PNLSIVTEYLSRGSL  121 (309)
T ss_dssp             TCCEEEEECCTTCBH
T ss_pred             CceEEEEecCCCCcH
Confidence            999999999999874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.33  E-value=5.6e-12  Score=84.99  Aligned_cols=85  Identities=16%  Similarity=0.217  Sum_probs=74.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .++|...+.||+|.||  .||.+..  ++..+++|.+.... .......+.+|+..++.++|+|++++++++......++
T Consensus        14 ~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFA--KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             ETTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCEEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence            4578999999999999  9999998  78899999987543 23345678899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        92 v~e~~~~~~L  101 (328)
T 3fe3_A           92 IMEYASGGEV  101 (328)
T ss_dssp             EECCCTTCBH
T ss_pred             EEECCCCCcH
Confidence            9999998864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.33  E-value=7.5e-12  Score=83.25  Aligned_cols=83  Identities=16%  Similarity=0.155  Sum_probs=73.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+.... ......+.+|+..+..++|+|++++++++......++||
T Consensus        10 ~~~~~~~~lG~G~~g--~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   86 (310)
T 3s95_A           10 SDLIHGEVLGKGCFG--QAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT   86 (310)
T ss_dssp             GGEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHeeccceecCCCCE--EEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence            467888999999999  9999998  68889999886543 455678899999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        87 e~~~~~~L   94 (310)
T 3s95_A           87 EYIKGGTL   94 (310)
T ss_dssp             ECCTTCBH
T ss_pred             EecCCCcH
Confidence            99999874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.33  E-value=3.5e-12  Score=86.29  Aligned_cols=96  Identities=14%  Similarity=0.260  Sum_probs=79.8

Q ss_pred             ccccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCC
Q 045247           24 RIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKH   95 (121)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~   95 (121)
                      ..+....+....++|...+.||+|.||  .||++.+       .+..+++|.+...........+.+|+..+..+ +|+|
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpn   87 (359)
T 3vhe_A           10 LPYDASKWEFPRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN   87 (359)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             CCCCcccccccccceeeceeecCCCCc--eEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcc
Confidence            345677778888899999999999999  9999974       44789999998654344567789999999999 6999


Q ss_pred             cceeeeEEecCC-ccEEEEeccCCCCC
Q 045247           96 ILKLIGCCLETP-IPILVFEYGEYRTL  121 (121)
Q Consensus        96 ~~~~~~~~~~~~-~~~lv~e~~~~g~L  121 (121)
                      ++++++.+.... ..++||||+++|+|
T Consensus        88 iv~~~~~~~~~~~~~~iv~e~~~~g~L  114 (359)
T 3vhe_A           88 VVNLLGACTKPGGPLMVIVEFCKFGNL  114 (359)
T ss_dssp             BCCEEEEECSTTSCCEEEEECCTTEEH
T ss_pred             eeeeeeeeecCCCceEEEEEecCCCcH
Confidence            999999987654 48999999998864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.32  E-value=7.3e-12  Score=83.12  Aligned_cols=84  Identities=17%  Similarity=0.175  Sum_probs=72.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ...|...+.||+|.||  .||++..  .+..+++|.+.... ......+.+|+..+..++|+|++++++.+...+..++|
T Consensus        19 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   95 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (297)
T ss_dssp             GGTBCCCEEEEEETTE--EEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhceeeeeeeccCCCe--EEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence            3578999999999999  9999987  78889999886543 22356678899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        96 ~e~~~~~~L  104 (297)
T 3fxz_A           96 MEYLAGGSL  104 (297)
T ss_dssp             EECCTTCBH
T ss_pred             EECCCCCCH
Confidence            999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.32  E-value=2.7e-13  Score=96.71  Aligned_cols=89  Identities=15%  Similarity=0.204  Sum_probs=74.7

Q ss_pred             HHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           28 AKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        28 ~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      .+.+....++|...+.||+|.||  .||++.+ .+..+++|.+....  .....+.+|+.+++.++|+|++++++++.. 
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-  333 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFG--EVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-  333 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSE--EEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             ccceecchhhhhhheecccCCCe--EEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence            44555566778889999999999  9999999 66779999997653  234678999999999999999999998865 


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus       334 ~~~~lv~e~~~~gsL  348 (535)
T 2h8h_A          334 EPIYIVTEYMSKGSL  348 (535)
T ss_dssp             SSCEEEECCCTTEEH
T ss_pred             ccceEeeehhcCCcH
Confidence            778999999998764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.32  E-value=2.6e-12  Score=87.93  Aligned_cols=91  Identities=20%  Similarity=0.309  Sum_probs=76.6

Q ss_pred             HHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           29 KELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        29 ~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      +.+....++|...+.||+|.||  .||++.+  .+..+++|.+...........+.+|+..+..++|+|++++++++...
T Consensus       107 ~~~~~~~~~~~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  184 (377)
T 3cbl_A          107 DKWVLNHEDLVLGEQIGRGNFG--EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK  184 (377)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             cccEEchHHeEEeeEeccCCCC--eEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC
Confidence            3444455678888999999999  9999998  68889999987654333456788899999999999999999999988


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus       185 ~~~~lv~e~~~~g~L  199 (377)
T 3cbl_A          185 QPIYIVMELVQGGDF  199 (377)
T ss_dssp             SSCEEEEECCTTCBH
T ss_pred             CCcEEEEEcCCCCCH
Confidence            999999999998874

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.32  E-value=6.3e-13  Score=93.04  Aligned_cols=90  Identities=10%  Similarity=0.146  Sum_probs=76.6

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           27 SAKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      ..+.+.....+|...+.||+|.||  .||++.+ .+..+++|.+....  .....+.+|+.++..++|+|++++++++. 
T Consensus       179 ~~~~~~i~~~~~~~~~~lG~G~fg--~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-  253 (454)
T 1qcf_A          179 EKDAWEIPRESLKLEKKLGAGQFG--EVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-  253 (454)
T ss_dssp             CTTCSBCCGGGEEEEEEEECCSSE--EEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-
T ss_pred             cccceeechHHeEEEEEcccCCce--EEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-
Confidence            345556667788899999999999  9999999 77889999997653  34677899999999999999999999886 


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      .+..++||||+++|+|
T Consensus       254 ~~~~~lv~e~~~~g~L  269 (454)
T 1qcf_A          254 KEPIYIITEFMAKGSL  269 (454)
T ss_dssp             SSSCEEEECCCTTCBH
T ss_pred             CCccEEEEeecCCCcH
Confidence            5778999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.31  E-value=3e-12  Score=93.34  Aligned_cols=85  Identities=9%  Similarity=0.051  Sum_probs=67.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHH---HHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYS---INNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~---~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .++|...+.||+|.||  .||.+..  ++..+|+|.+.....  .......   ...+.++..++|||++++++++...+
T Consensus       188 lddf~i~k~LG~G~fG--~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~  265 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD  265 (689)
T ss_dssp             GGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEecccCe--EEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence            3578889999999999  9999998  789999999864320  0111222   33355667788999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      .+|+||||++||+|
T Consensus       266 ~lylVmEy~~GGdL  279 (689)
T 3v5w_A          266 KLSFILDLMNGGDL  279 (689)
T ss_dssp             EEEEEECCCCSCBH
T ss_pred             EEEEEEecCCCCcH
Confidence            99999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.31  E-value=8.7e-12  Score=83.24  Aligned_cols=69  Identities=10%  Similarity=0.204  Sum_probs=57.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.+...........+.+|+..++.++|||++++++.+...
T Consensus         6 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   76 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFG--VVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLET   76 (332)
T ss_dssp             HHEEEEEEEECC-CS--EEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEEC
T ss_pred             hcCceeeEecCCCCe--EEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEe
Confidence            467888999999999  9999998  78899999987554334567889999999999999999999988543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.31  E-value=9.2e-12  Score=82.40  Aligned_cols=84  Identities=11%  Similarity=0.132  Sum_probs=72.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+.....  ......+..++..+..++|+|++++++++......++
T Consensus        31 ~~y~i~~~lg~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  108 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPL--QFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV  108 (286)
T ss_dssp             TTEEEEEEEEBSTTC--EEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             CcEEEEEEEcccCCe--EEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence            468899999999999  9999998  588999999986542  2334778899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++++|
T Consensus       109 v~e~~~g~~L  118 (286)
T 3uqc_A          109 VAEWIRGGSL  118 (286)
T ss_dssp             EEECCCEEEH
T ss_pred             EEEecCCCCH
Confidence            9999998764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.30  E-value=1.1e-11  Score=84.87  Aligned_cols=84  Identities=19%  Similarity=0.287  Sum_probs=71.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .+|...+.||+|.||  .||++..     .+..+++|.+...........+.+|+..+..++|+|++++++++......+
T Consensus        45 ~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  122 (373)
T 2qol_A           45 TNISIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM  122 (373)
T ss_dssp             GGCCCCEEEEECSSS--EEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             hhceeeeEEeeCCCe--EEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence            468889999999999  9999976     245699999876543445678999999999999999999999999989999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus       123 lv~e~~~~~sL  133 (373)
T 2qol_A          123 IVTEYMENGSL  133 (373)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEeCCCCCcH
Confidence            99999998875

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.30  E-value=1.2e-11  Score=83.05  Aligned_cols=84  Identities=17%  Similarity=0.254  Sum_probs=71.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--C---CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--Q---ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~---~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      +.|...+.||+|.||  .||++.+  .   +..+++|.+...........+.+|+..+..++|+|++++++++......+
T Consensus        49 ~~y~i~~~lG~G~~g--~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  126 (325)
T 3kul_A           49 SRIHIEKIIGSGDSG--EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM  126 (325)
T ss_dssp             GGEEEEEEEEETTTE--EEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred             hHeEEeeEEEeCCCc--EEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence            346677999999999  9999988  2   34599999986543455678899999999999999999999999889999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus       127 lv~e~~~~~~L  137 (325)
T 3kul_A          127 IVTEYMENGSL  137 (325)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEeeCCCCCcH
Confidence            99999999875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.30  E-value=4.8e-12  Score=84.45  Aligned_cols=95  Identities=16%  Similarity=0.265  Sum_probs=78.7

Q ss_pred             cccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcc
Q 045247           25 IFSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHIL   97 (121)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~   97 (121)
                      .+..+++....++|...+.||+|.||  .||++..       .+..+++|.+...........+.+++..+..++|+|++
T Consensus        14 ~~~~~~~~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~   91 (322)
T 1p4o_A           14 VYVPDEWEVAREKITMSRELGQGSFG--MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV   91 (322)
T ss_dssp             CCCCCTTBCCGGGEEEEEEEEECSSS--EEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBC
T ss_pred             ccChhhhcchhhheeeeeEeccCCce--EEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence            34445666677789999999999999  9999876       14678999987654334456788999999999999999


Q ss_pred             eeeeEEecCCccEEEEeccCCCCC
Q 045247           98 KLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        98 ~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++++.+......++||||+++|+|
T Consensus        92 ~~~~~~~~~~~~~lv~e~~~~~~L  115 (322)
T 1p4o_A           92 RLLGVVSQGQPTLVIMELMTRGDL  115 (322)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBH
T ss_pred             eeEEEEccCCccEEEEEeCCCCcH
Confidence            999999988999999999998875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.30  E-value=1.7e-11  Score=82.29  Aligned_cols=83  Identities=12%  Similarity=0.049  Sum_probs=72.8

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .+.|...+.||+|.||  .||++..  ++..+++|.+....  .....+.+|+..+..++|||++++++.+......++|
T Consensus         4 ~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv   79 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFG--IVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI   79 (321)
T ss_dssp             TTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhceEeeeEEecCCCe--EEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence            3568888999999999  9999998  68889999987653  4456688999999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~e~~~g~~L   88 (321)
T 1tki_A           80 FEFISGLDI   88 (321)
T ss_dssp             ECCCCCCBH
T ss_pred             EEeCCCCCH
Confidence            999998864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.29  E-value=6.4e-12  Score=84.39  Aligned_cols=84  Identities=17%  Similarity=0.205  Sum_probs=69.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++.+......++||
T Consensus         7 ~~y~i~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            7 EDWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TCEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeeEEecCCCE--EEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            478889999999999  9999988  688899999875532233456788999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        85 e~~~~~~L   92 (323)
T 3tki_A           85 EYCSGGEL   92 (323)
T ss_dssp             ECCTTEEG
T ss_pred             EcCCCCcH
Confidence            99998764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.29  E-value=1.6e-11  Score=80.07  Aligned_cols=83  Identities=22%  Similarity=0.342  Sum_probs=72.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .++|...+.||+|.||  .||++.. .+..+++|.+....  .....+.+|+..+..++|+|++++++++......++||
T Consensus         9 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFG--LVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF   84 (269)
T ss_dssp             GGGEEEEEEEEECSSC--EEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhhceeeheecCCCcc--EEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence            3468888999999999  9999999 78889999998653  23466889999999999999999999999989999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        85 e~~~~~~L   92 (269)
T 4hcu_A           85 EFMEHGCL   92 (269)
T ss_dssp             ECCTTCBH
T ss_pred             EeCCCCcH
Confidence            99998864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.28  E-value=2.3e-11  Score=81.74  Aligned_cols=88  Identities=23%  Similarity=0.310  Sum_probs=75.2

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe-C------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW-Q------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      ....++|...+.||+|.||  .||++.. .      +..+++|.+...........+.+|+..+..++|+|++++++++.
T Consensus        43 ~~~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSC--EEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             EecHHHCeeeeeeeecCCe--eEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            4456789999999999999  9999987 2      26799999886543444677899999999999999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....++||||+++|+|
T Consensus       121 ~~~~~~lv~e~~~~~~L  137 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDL  137 (343)
T ss_dssp             SSSSCEEEEECCTTCBH
T ss_pred             cCCceEEEEecCCCCcH
Confidence            99999999999998875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.28  E-value=1.4e-11  Score=84.07  Aligned_cols=85  Identities=15%  Similarity=0.192  Sum_probs=72.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .++|...+.||+|.||  .||++.+       .+..+++|.+...........+..|+..+..++|+|++++++++....
T Consensus        70 ~~~~~~~~~LG~G~fg--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  147 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFG--EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  147 (367)
T ss_dssp             GGGEEEEEECCCCSSS--CEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HhHeEEeeEeeeCCCE--EEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            3567788999999999  9999984       356799999876543445667889999999999999999999999989


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus       148 ~~~lv~e~~~~g~L  161 (367)
T 3l9p_A          148 PRFILLELMAGGDL  161 (367)
T ss_dssp             SCEEEEECCTTEEH
T ss_pred             CCEEEEEeCCCCCH
Confidence            99999999998764

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.27  E-value=1.4e-11  Score=83.97  Aligned_cols=85  Identities=15%  Similarity=0.197  Sum_probs=73.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+..+..++|||++++++.+......++
T Consensus        28 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCeEEeeEEecCCCe--EEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            4578999999999999  9999998  68899999997653 23345678899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       106 v~e~~~gg~L  115 (362)
T 2bdw_A          106 VFDLVTGGEL  115 (362)
T ss_dssp             EECCCCSCBH
T ss_pred             EEecCCCCCH
Confidence            9999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.27  E-value=2.4e-11  Score=83.70  Aligned_cols=83  Identities=16%  Similarity=0.120  Sum_probs=73.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+.... ......+.+|+..+..++|+|++++++.+......++||
T Consensus        51 ~~y~i~~~LG~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  127 (387)
T 1kob_A           51 DYYDILEELGSGAFG--VVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  127 (387)
T ss_dssp             GTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCE--EEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence            568889999999999  9999998  67889999987654 334567889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       128 E~~~gg~L  135 (387)
T 1kob_A          128 EFLSGGEL  135 (387)
T ss_dssp             ECCCCCBH
T ss_pred             EcCCCCcH
Confidence            99999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.26  E-value=1.1e-11  Score=87.73  Aligned_cols=88  Identities=16%  Similarity=0.388  Sum_probs=75.7

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .+.....+|...+.||+|.||  .||++.+  .+..+++|.+....  .....+.+|+.++..++|+|++++++++....
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~  289 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP  289 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTS--SEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ccccCHHHceeeeEecCCCCe--EEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            344455678888999999999  9999998  58889999987653  34567899999999999999999999999989


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus       290 ~~~lv~E~~~~g~L  303 (495)
T 1opk_A          290 PFYIITEFMTYGNL  303 (495)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             cEEEEEEccCCCCH
Confidence            99999999998875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.26  E-value=1.5e-11  Score=79.98  Aligned_cols=84  Identities=19%  Similarity=0.286  Sum_probs=72.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--CccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--PIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~~~lv  112 (121)
                      ++|...+.||+|.||  .||++.+.+..+++|.+.... .......+.+|+..+..++|+|++++++++...  ...+++
T Consensus        10 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           10 KQLNFLTKLNENHSG--ELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGCEEEEEEEEETTE--EEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHhHHHHHhcCCCcc--eEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            368888999999999  999999988889999987654 233456788999999999999999999999876  778999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        88 ~e~~~~~~L   96 (271)
T 3kmu_A           88 THWMPYGSL   96 (271)
T ss_dssp             EECCTTCBH
T ss_pred             ecccCCCcH
Confidence            999998875

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.26  E-value=1.4e-11  Score=83.95  Aligned_cols=83  Identities=16%  Similarity=0.185  Sum_probs=72.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .+.|...+.||+|.||  .||++..  ++..+++|.+....  .....+.+++..++.++|+|++++++++......++|
T Consensus        19 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   94 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFG--VARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII   94 (361)
T ss_dssp             TTTEEEEEEESSSTTS--SEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCcEEEEEEeccCCCE--EEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence            3578899999999999  9999998  78899999997653  2335677899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        95 ~e~~~~~~L  103 (361)
T 3uc3_A           95 MEYASGGEL  103 (361)
T ss_dssp             EECCCSCBH
T ss_pred             EEeCCCCCH
Confidence            999998874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.25  E-value=2.2e-11  Score=82.56  Aligned_cols=84  Identities=7%  Similarity=0.052  Sum_probs=73.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||.|.||  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++.+......++||
T Consensus        33 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  110 (360)
T 3eqc_A           33 DDFEKISELGAGNGG--VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM  110 (360)
T ss_dssp             GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceeeeeecCCCCe--EEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence            468888999999999  9999998  688899999886543444677889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       111 e~~~~~~L  118 (360)
T 3eqc_A          111 EHMDGGSL  118 (360)
T ss_dssp             CCCTTCBH
T ss_pred             ECCCCCCH
Confidence            99998875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.25  E-value=1.2e-11  Score=82.17  Aligned_cols=87  Identities=22%  Similarity=0.345  Sum_probs=73.9

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      ....+|...+.||+|.||  .||++..       .+..+++|.+...........+.+|+..+..++|+|++++++.+..
T Consensus        20 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   97 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFG--KVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ   97 (314)
T ss_dssp             CCGGGEEEEEEEEECSSS--EEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             cchhheeeeeeecccCCe--eEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence            345678889999999999  9999976       2367999998765434456778899999999999999999999999


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      ....++||||+++|+|
T Consensus        98 ~~~~~lv~e~~~~~~L  113 (314)
T 2ivs_A           98 DGPLLLIVEYAKYGSL  113 (314)
T ss_dssp             SSSCEEEEECCTTCBH
T ss_pred             CCceEEEEeecCCCCH
Confidence            9999999999998864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.25  E-value=3.2e-11  Score=79.83  Aligned_cols=84  Identities=18%  Similarity=0.148  Sum_probs=72.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+....  .......+.+++..+..++|+|++++++.+......++
T Consensus        11 ~~y~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMS--TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             TTEEEEEEEEEETTE--EEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             ccEEEEEEEccCCCE--EEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            468888999999999  9999998  67889999886432  12335678899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        89 v~e~~~g~~L   98 (294)
T 4eqm_A           89 VMEYIEGPTL   98 (294)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCCH
Confidence            9999999875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.25  E-value=1.4e-11  Score=82.88  Aligned_cols=92  Identities=12%  Similarity=0.089  Sum_probs=76.7

Q ss_pred             HHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC----ChhHHHHHHHHHHHHHhcCCCCcceeee
Q 045247           28 AKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL----PDSVYKYSINNIVYAAQMDHKHILKLIG  101 (121)
Q Consensus        28 ~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~~~~~~~  101 (121)
                      ...+....+.|...+.||+|.||  .||++..  .+..+++|.+....    .......+..|+..+..++|+|++++++
T Consensus        18 ~~~~~~~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~   95 (345)
T 3hko_A           18 GGSLLELQKKYHLKGAIGQGSYG--VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYE   95 (345)
T ss_dssp             CBCHHHHHHHEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CchhhhhhhheeecceeeecCCe--EEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeeh
Confidence            34455566789999999999999  9999998  67889999886431    1233567889999999999999999999


Q ss_pred             EEecCCccEEEEeccCCCCC
Q 045247          102 CCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       102 ~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++......++||||+++|+|
T Consensus        96 ~~~~~~~~~lv~e~~~gg~L  115 (345)
T 3hko_A           96 VYEDEQYICLVMELCHGGHL  115 (345)
T ss_dssp             EEECSSEEEEEEECCCSCBH
T ss_pred             hhccCCeEEEEEeCCCCCcH
Confidence            99999999999999999875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.25  E-value=2.6e-11  Score=83.11  Aligned_cols=84  Identities=11%  Similarity=0.191  Sum_probs=73.0

Q ss_pred             cCCCcCCeeecC--CCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQC--DFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g--~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|  .|+  .||++..  .+..+++|.+.... .......+.+|+.+++.++|+|++++++++......+
T Consensus        25 ~~y~~~~~lG~G~~~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLM--TVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             GGEEEEEEEEEETTTTE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CcEEEEecccCCcCCce--EEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            468889999999  999  9999998  68899999987543 1233567888999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus       103 lv~e~~~~~~L  113 (389)
T 3gni_B          103 VVTSFMAYGSA  113 (389)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEEccCCCCH
Confidence            99999998864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.25  E-value=2.5e-11  Score=82.89  Aligned_cols=85  Identities=14%  Similarity=0.033  Sum_probs=72.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-----SVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .+.|...+.||+|.||  .||++..  ++..+++|.+......     .....+.+|+..+..++|||++++++.+....
T Consensus        11 ~~~y~~~~~LG~G~fg--~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           11 EDFYDIGEELGSGQFA--IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT   88 (361)
T ss_dssp             GGTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             hhceEEeeEEeeCcCE--EEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence            3568889999999999  9999998  6889999998764311     12467889999999999999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        89 ~~~lv~e~~~gg~L  102 (361)
T 2yab_A           89 DVVLILELVSGGEL  102 (361)
T ss_dssp             EEEEEEECCCSCBH
T ss_pred             EEEEEEEcCCCCcH
Confidence            99999999998875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.24  E-value=6.3e-12  Score=82.49  Aligned_cols=88  Identities=16%  Similarity=0.228  Sum_probs=71.8

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      .+....++|...+.||.|.||  .||.+.+ .+..+++|.+....  .....+.+|+..+..+.|+|++++++.+.....
T Consensus        18 ~~~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   93 (283)
T 3gen_A           18 SWEIDPKDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP   93 (283)
T ss_dssp             TTBCCGGGEEEEEECC---CE--EEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CccCCHHHHHhHhhcCCCCCc--eEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCC
Confidence            333445678888999999999  9999988 77789999998653  234668899999999999999999999998899


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus        94 ~~lv~e~~~~~~L  106 (283)
T 3gen_A           94 IFIITEYMANGCL  106 (283)
T ss_dssp             EEEEECCCTTCBH
T ss_pred             eEEEEeccCCCcH
Confidence            9999999998864

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.24  E-value=2.1e-11  Score=81.44  Aligned_cols=84  Identities=17%  Similarity=0.244  Sum_probs=70.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC--ccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP--IPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~--~~~l  111 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++++....  ..++
T Consensus         9 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A            9 HLWLLSDILGQGATA--NVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             EEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCEEEEEEecCCCCe--EEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence            457888999999999  9999998  588999999875431223566788999999999999999999887654  7799


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        87 v~e~~~~~~L   96 (319)
T 4euu_A           87 IMEFCPCGSL   96 (319)
T ss_dssp             EEECCTTCBH
T ss_pred             EEeCCCCCCH
Confidence            9999998864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.24  E-value=2.4e-11  Score=83.18  Aligned_cols=78  Identities=18%  Similarity=0.112  Sum_probs=64.0

Q ss_pred             CCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCC
Q 045247           41 REVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      .+.||+|.||  .||++..  .+..+++|.+.... ......+.+|+..+..++|+|++++++++......++||||+++
T Consensus        94 ~~~lG~G~~g--~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  170 (373)
T 2x4f_A           94 TEILGGGRFG--QVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG  170 (373)
T ss_dssp             EEECC-------CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             ceEEecCcCE--EEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence            5679999999  9999988  68899999998754 34467788999999999999999999999999999999999998


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |+|
T Consensus       171 ~~L  173 (373)
T 2x4f_A          171 GEL  173 (373)
T ss_dssp             CEE
T ss_pred             CcH
Confidence            864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.24  E-value=3.6e-11  Score=82.17  Aligned_cols=85  Identities=13%  Similarity=0.225  Sum_probs=71.5

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe---------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEe
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW---------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCL  104 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~  104 (121)
                      .++|...+.||+|.||  .||++..         .+..+++|.+...........+..|+..+..+ +|+|++++++++.
T Consensus        80 ~~~~~~~~~LG~G~fg--~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  157 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFG--QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT  157 (370)
T ss_dssp             GGGEEEEEEESCCSSS--EEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred             HHHCEeeeEEeeCCCe--eEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence            3567778899999999  9999975         23468999987654334467789999999999 7999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....++||||+++|+|
T Consensus       158 ~~~~~~lv~e~~~~g~L  174 (370)
T 2psq_A          158 QDGPLYVIVEYASKGNL  174 (370)
T ss_dssp             SSSSCEEEEECCTTCBH
T ss_pred             cCCCEEEEEEcCCCCCH
Confidence            99999999999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.24  E-value=3.1e-11  Score=78.60  Aligned_cols=83  Identities=16%  Similarity=0.170  Sum_probs=72.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .++|...+.||+|.||  .||++.. .+..+++|.+....  .....+.+|+..+..++|+|++++++.+......++||
T Consensus         7 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (268)
T 3sxs_A            7 REEITLLKELGSGQFG--VVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT   82 (268)
T ss_dssp             GGGEEEEEEEEEETTE--EEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhheeeeeeeccCCCc--eEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence            3568888999999999  9999988 77789999987653  33466889999999999999999999999888999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        83 e~~~~~~L   90 (268)
T 3sxs_A           83 EYISNGCL   90 (268)
T ss_dssp             ECCTTCBH
T ss_pred             EccCCCcH
Confidence            99998864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.24  E-value=1.7e-11  Score=80.81  Aligned_cols=84  Identities=12%  Similarity=0.013  Sum_probs=72.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+...........+..|+..+..++|+|++++++.+......++||
T Consensus        22 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           22 DLFIFKRKLGSGAFG--DVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheeecceeccCCCe--EEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence            368889999999999  9999998  678899998875532233567889999999999999999999999989999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       100 e~~~~~~L  107 (285)
T 3is5_A          100 ETCEGGEL  107 (285)
T ss_dssp             CCCSCCBH
T ss_pred             EeCCCCcH
Confidence            99998864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.24  E-value=6.7e-12  Score=82.51  Aligned_cols=87  Identities=16%  Similarity=0.388  Sum_probs=75.0

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      +....++|...+.||+|.+|  .||++.+  .+..+++|.+....  .....+..|+..+..++|+|++++++.+.....
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   83 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   83 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTC--SEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ccccccceeEEeecCCCCce--eEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            33455678889999999999  9999998  58889999987653  456778899999999999999999999999899


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++++|
T Consensus        84 ~~~v~e~~~~~~L   96 (288)
T 3kfa_A           84 FYIITEFMTYGNL   96 (288)
T ss_dssp             EEEEEECCTTEEH
T ss_pred             EEEEEEcCCCCcH
Confidence            9999999998754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.23  E-value=3.2e-12  Score=89.34  Aligned_cols=90  Identities=12%  Similarity=0.055  Sum_probs=73.5

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      ++....++|...+.||+|.||  .||++..  .+..+++|.+.....  ......+..+..++..++|+|++++++++..
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG--~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFG--EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             cccCChhheEEEEEEEeCCCE--EEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            344456789999999999999  9999998  678899999864310  0112236778888999999999999999999


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      ....++||||+++|+|
T Consensus       146 ~~~~~lV~Ey~~gg~L  161 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDL  161 (437)
T ss_dssp             SSEEEEEECCCTTCBH
T ss_pred             CCEEEEEEecCCCCcH
Confidence            9999999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.22  E-value=3.8e-11  Score=83.96  Aligned_cols=84  Identities=15%  Similarity=0.222  Sum_probs=72.0

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC-ccEE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP-IPIL  111 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~-~~~l  111 (121)
                      ...++|...+.||+|.||  .||++.+.+..+++|.++...   ....+..|+..+..++|+|++++++++.... ..++
T Consensus       190 i~~~~~~~~~~lG~G~fg--~V~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i  264 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFG--DVMLGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI  264 (450)
T ss_dssp             CCGGGEEEEEEEEECSSE--EEEEEEETTEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred             cChHHeEEEeeecCcCCe--eEEEEEecCCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence            345678888999999999  999999888899999997653   3467889999999999999999999987654 7899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       265 v~e~~~~g~L  274 (450)
T 1k9a_A          265 VTEYMAKGSL  274 (450)
T ss_dssp             EEECCTTCBH
T ss_pred             EEEecCCCcH
Confidence            9999999875

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.22  E-value=2.5e-11  Score=84.97  Aligned_cols=85  Identities=13%  Similarity=0.085  Sum_probs=71.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .+.|...+.||+|.||  .||++..  .+..+++|.+...... .....+.+|+..+..++|||++++++.+......++
T Consensus        10 ~~~Y~i~~~LG~G~fg--~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A           10 TEEYQLFEELGKGAFS--VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHHEEEEEEEEEC--C--EEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             cCCeEEEEEeccCCCe--EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            3468889999999999  9999988  7888999998765422 335678899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        88 v~E~~~gg~L   97 (444)
T 3soa_A           88 IFDLVTGGEL   97 (444)
T ss_dssp             EECCCBCCBH
T ss_pred             EEEeCCCCCH
Confidence            9999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.22  E-value=5.5e-12  Score=87.55  Aligned_cols=91  Identities=14%  Similarity=0.069  Sum_probs=74.5

Q ss_pred             HHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           29 KELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        29 ~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      ++.....++|...+.||+|.||  .||.+..  ++..+++|.+.....  ......+..+..++..++|++++++++++.
T Consensus        54 ~~~~~~~~~f~~~~~lG~G~fG--~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           54 KEVRLQRDDFEILKVIGRGAFS--EVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhccCChhhEEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            3444556789999999999999  9999998  688999999865310  011234677888899999999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....++||||+++|+|
T Consensus       132 ~~~~~~lVmE~~~gg~L  148 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDL  148 (412)
T ss_dssp             CSSEEEEEECCCCSCBH
T ss_pred             eCCEEEEEEcCCCCCcH
Confidence            99999999999999875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.21  E-value=5.5e-11  Score=80.63  Aligned_cols=84  Identities=18%  Similarity=0.235  Sum_probs=71.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.+....  .......+..|..++..+ +|||++++++++......+
T Consensus         9 ~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYA--KVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF   86 (345)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hheEEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence            468888999999999  9999998  68889999987542  123356677888888877 7999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        87 lv~e~~~gg~L   97 (345)
T 3a8x_A           87 FVIEYVNGGDL   97 (345)
T ss_dssp             EEECCCCSCBH
T ss_pred             EEEeCCCCCcH
Confidence            99999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.21  E-value=1.8e-11  Score=82.85  Aligned_cols=84  Identities=13%  Similarity=0.103  Sum_probs=71.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||.+..  ++..+++|.++...  .......+..|...+..++||+++++++.+......++
T Consensus         5 ~~y~~~~~lG~G~fg--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHeEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence            468888999999999  9999988  68899999986531  01224567888999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        83 v~E~~~gg~L   92 (337)
T 1o6l_A           83 VMEYANGGEL   92 (337)
T ss_dssp             EEECCTTCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.21  E-value=6.7e-11  Score=78.23  Aligned_cols=85  Identities=13%  Similarity=0.170  Sum_probs=67.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-------------------------hHHHHHHHHHHH
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-------------------------SVYKYSINNIVY   87 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-------------------------~~~~~~~~~~~~   87 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+......                         .....+.+|+..
T Consensus        12 ~~~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   89 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYG--VVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI   89 (298)
T ss_dssp             ETTEEEEEEEEC--CC--EEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred             ecceEEEeEEeecCCE--EEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence            3578889999999999  9999988  6888999998654210                         012457889999


Q ss_pred             HHhcCCCCcceeeeEEec--CCccEEEEeccCCCCC
Q 045247           88 AAQMDHKHILKLIGCCLE--TPIPILVFEYGEYRTL  121 (121)
Q Consensus        88 l~~l~h~~~~~~~~~~~~--~~~~~lv~e~~~~g~L  121 (121)
                      +..++|+|++++++.+..  ....++||||+++++|
T Consensus        90 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l  125 (298)
T 2zv2_A           90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV  125 (298)
T ss_dssp             HHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBS
T ss_pred             HHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcH
Confidence            999999999999999876  5678999999998865

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.21  E-value=4.9e-11  Score=78.39  Aligned_cols=83  Identities=20%  Similarity=0.304  Sum_probs=70.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CC-------eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QE-------RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      ++|...+.||+|.||  .||++..  .+       ..+++|.+.... ......+.+|+..+..++|+|++++++.+...
T Consensus         8 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            8 EDLIFNESLGQGTFT--KIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG   84 (289)
T ss_dssp             GGEEEEEEEEEETTE--EEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred             hHeeeeeeeccCCCc--eEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence            467888999999999  9999987  33       468899886543 34467788999999999999999999999998


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus        85 ~~~~lv~e~~~~~~L   99 (289)
T 4fvq_A           85 DENILVQEFVKFGSL   99 (289)
T ss_dssp             TCCEEEEECCTTCBH
T ss_pred             CCCEEEEECCCCCCH
Confidence            999999999998875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.21  E-value=4e-11  Score=78.25  Aligned_cols=84  Identities=17%  Similarity=0.205  Sum_probs=72.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.+|  .||++..  .+..+++|.+...........+.+++..+..++|+|++++++.+......++||
T Consensus         7 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            7 EDWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEeecCCCc--EEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            468888999999999  9999998  688899999875432344577888999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        85 e~~~~~~L   92 (276)
T 2yex_A           85 EYCSGGEL   92 (276)
T ss_dssp             ECCTTEEG
T ss_pred             EecCCCcH
Confidence            99988764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.21  E-value=5.9e-11  Score=77.83  Aligned_cols=85  Identities=15%  Similarity=0.197  Sum_probs=72.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+..+..++|+|++++++.+......++
T Consensus         5 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   82 (284)
T ss_dssp             TTTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhhhhhhhcCcCCe--EEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence            3578889999999999  9999988  68889999987543 23345678889999999999999999999999899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++++|
T Consensus        83 v~e~~~~~~l   92 (284)
T 3kk8_A           83 VFDLVTGGEL   92 (284)
T ss_dssp             EECCCCSCBH
T ss_pred             EEecCCCCCH
Confidence            9999998764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.21  E-value=4.5e-11  Score=81.07  Aligned_cols=84  Identities=19%  Similarity=0.222  Sum_probs=71.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC----ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL----PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.+....    .......+.+|+.++..++|+|++++++.+......
T Consensus        24 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  101 (351)
T 3c0i_A           24 DVYELCEVIGKGPFS--VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML  101 (351)
T ss_dssp             HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             cceEEeeEEeeCCCE--EEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            458889999999999  9999988  68899999886421    011246788999999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus       102 ~lv~e~~~g~~L  113 (351)
T 3c0i_A          102 YMVFEFMDGADL  113 (351)
T ss_dssp             EEEEECCSSCBH
T ss_pred             EEEEeCCCCCCH
Confidence            999999998874

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.21  E-value=3.7e-12  Score=88.38  Aligned_cols=89  Identities=13%  Similarity=0.102  Sum_probs=72.5

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      +....++|...+.||+|.||  .||++..  ++..+++|.+.....  ......+..+..++..++|+|++++++++...
T Consensus        64 ~~~~~~~y~~~~~LG~G~fG--~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           64 LRMKAEDYEVVKVIGRGAFG--EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HSCCGGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             cccCccccEEEEEEEcCCCE--EEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            33445789999999999999  9999998  678899999864210  01123467888899999999999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus       142 ~~~~lV~E~~~gg~L  156 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDL  156 (410)
T ss_dssp             SEEEEEECCCTTEEH
T ss_pred             CEEEEEEeCCCCCcH
Confidence            999999999999864

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.20  E-value=6.2e-11  Score=77.52  Aligned_cols=84  Identities=15%  Similarity=0.242  Sum_probs=72.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+.... .......+..++..+..+ +|+|++++++.+......++
T Consensus        11 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A           11 TEFHELEKIGSGEFG--SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             chhhhhhhhcCCCce--EEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            468888999999999  9999998  68899999987643 123456778888888888 89999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        89 v~e~~~~~~L   98 (289)
T 1x8b_A           89 QNEYCNGGSL   98 (289)
T ss_dssp             EEECCTTCBH
T ss_pred             EEEecCCCcH
Confidence            9999999875

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.20  E-value=7e-11  Score=79.36  Aligned_cols=84  Identities=13%  Similarity=0.069  Sum_probs=71.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+......     .....+.+|+..+..++|||++++++++.....
T Consensus        11 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A           11 DYYDTGEELGSGQFA--VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cceEeceEEeeCCCe--EEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            358888999999999  9999998  6888999988754311     125678899999999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus        89 ~~lv~e~~~~~~L  101 (326)
T 2y0a_A           89 VILILELVAGGEL  101 (326)
T ss_dssp             EEEEEECCCSCBH
T ss_pred             EEEEEEcCCCCCH
Confidence            9999999998864

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.20  E-value=3.7e-11  Score=80.32  Aligned_cols=82  Identities=16%  Similarity=0.297  Sum_probs=57.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .++|...+.||+|.||  .||++..  ++..+++|.+...........+.+|+..++.++|+|++++++++......++|
T Consensus         4 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   81 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYA--TVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV   81 (317)
T ss_dssp             ---------------C--EEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred             ccceeEeeEECCCCCE--EEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence            3578889999999999  9999988  68889999987553222345678899999999999999999999998999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      |||+++
T Consensus        82 ~e~~~~   87 (317)
T 2pmi_A           82 FEFMDN   87 (317)
T ss_dssp             EECCCC
T ss_pred             EEecCC
Confidence            999984

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.20  E-value=4.4e-11  Score=80.11  Aligned_cols=83  Identities=18%  Similarity=0.137  Sum_probs=69.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc----cE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI----PI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~----~~  110 (121)
                      .++|...+.||+|.||  .||++.+.+..+++|.+....  ........|+..+..++|+|++++++++.....    .+
T Consensus        23 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           23 SMPLQLLEVKARGRFG--CVWKAQLLNEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             TEEEEEEEEEECSTTC--EEEEEEETTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             hhhchhhheecccCce--EEEEEEECCCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            3578899999999999  999998888899999987542  334455668888899999999999999976443    69


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        99 lv~e~~~~g~L  109 (322)
T 3soc_A           99 LITAFHEKGSL  109 (322)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEecCCCCCH
Confidence            99999999875

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.20  E-value=7.5e-11  Score=78.11  Aligned_cols=84  Identities=17%  Similarity=0.221  Sum_probs=72.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..|...+.||+|.||  .||++..  .+..+++|.+...........+..++..+..+.|+|++++++.+......++||
T Consensus        22 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFG--EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HHHHHhhhhcccCCe--EEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            458888999999999  9999988  688899999876543344677889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus       100 e~~~~~~L  107 (303)
T 3a7i_A          100 EYLGGGSA  107 (303)
T ss_dssp             ECCTTEEH
T ss_pred             EeCCCCcH
Confidence            99988753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.20  E-value=5.4e-11  Score=84.18  Aligned_cols=86  Identities=17%  Similarity=0.108  Sum_probs=70.0

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh------------hHHHHHHHHHHHHHhcCCCCccee
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD------------SVYKYSINNIVYAAQMDHKHILKL   99 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~------------~~~~~~~~~~~~l~~l~h~~~~~~   99 (121)
                      ....|...+.||+|.||  .||++..  .+..+++|.+......            .....+.+|+.++..++|||++++
T Consensus        34 i~~~Y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  111 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYG--EVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL  111 (504)
T ss_dssp             GGGTEEEEEEEEC--CE--EEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             cccceEEEeEecccCCe--EEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            34678899999999999  9999998  6788999998754311            124568889999999999999999


Q ss_pred             eeEEecCCccEEEEeccCCCCC
Q 045247          100 IGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       100 ~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++++......++||||+++|+|
T Consensus       112 ~~~~~~~~~~~lv~e~~~gg~L  133 (504)
T 3q5i_A          112 FDVFEDKKYFYLVTEFYEGGEL  133 (504)
T ss_dssp             EEEEECSSEEEEEEECCTTCBH
T ss_pred             EEEEEcCCEEEEEEecCCCCcH
Confidence            9999999999999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.20  E-value=3e-11  Score=79.02  Aligned_cols=83  Identities=14%  Similarity=0.078  Sum_probs=71.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+.... ......+.+|+..+..++|+|++++++.+......++||
T Consensus         9 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            9 QYYTLENTIGRGSWG--EVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhEEeeeEEeecCCE--EEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence            468888999999999  9999998  56788999887543 233567889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        86 e~~~~~~L   93 (277)
T 3f3z_A           86 ELCTGGEL   93 (277)
T ss_dssp             ECCCSCBH
T ss_pred             eccCCCcH
Confidence            99998764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.20  E-value=3.3e-11  Score=81.75  Aligned_cols=83  Identities=13%  Similarity=0.093  Sum_probs=65.9

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ..+.|...+.||+|.||  .||++..  .+..+++|.+....   ....+..|+..+..++|+|++++++++......++
T Consensus        51 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  125 (349)
T 2w4o_A           51 LSDFFEVESELGRGATS--IVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL  125 (349)
T ss_dssp             GGGTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCcEEEeeEEeeCCCE--EEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence            34568888999999999  9999998  57889999987642   34567788999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       126 v~e~~~~~~L  135 (349)
T 2w4o_A          126 VLELVTGGEL  135 (349)
T ss_dssp             EECCCCSCBH
T ss_pred             EEEeCCCCCH
Confidence            9999998864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.19  E-value=6.5e-11  Score=79.28  Aligned_cols=86  Identities=15%  Similarity=0.189  Sum_probs=70.5

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      ..++|...+.||.|.||  .||++.+       .+..+++|.+...........+..|+..+..+.|+|++++++.+...
T Consensus        28 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFG--EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             CGGGCEEEEECC--CSS--CEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ChhheEEEEEEcCCCCe--eEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            34578899999999999  9999984       45679999987554344566788999999999999999999999998


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus       106 ~~~~lv~e~~~~~~L  120 (327)
T 2yfx_A          106 LPRFILMELMAGGDL  120 (327)
T ss_dssp             SSCEEEEECCTTEEH
T ss_pred             CCcEEEEecCCCCcH
Confidence            899999999988764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.19  E-value=3.9e-11  Score=80.46  Aligned_cols=90  Identities=17%  Similarity=0.259  Sum_probs=75.5

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe--CC-----eEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeee
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW--QE-----RLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIG  101 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~  101 (121)
                      .+....++|...+.||.|.||  .||++..  .+     ..+++|.+...........+.+|+..+..+ +|+|++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  117 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFG--KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG  117 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSE--EEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccCCHHHceeeeEeccCCCc--ceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            445566789999999999999  9999987  22     368999987654344567788999999999 7999999999


Q ss_pred             EEecCCccEEEEeccCCCCC
Q 045247          102 CCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       102 ~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++......++||||+++|+|
T Consensus       118 ~~~~~~~~~lv~e~~~~g~L  137 (333)
T 2i1m_A          118 ACTHGGPVLVITEYCCYGDL  137 (333)
T ss_dssp             EECSSSSCEEEEECCTTEEH
T ss_pred             EEecCCceEEEEecCCCCcH
Confidence            99999999999999998764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.19  E-value=5.5e-11  Score=78.88  Aligned_cols=89  Identities=17%  Similarity=0.223  Sum_probs=74.9

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeE
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGC  102 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~  102 (121)
                      +....++|...+.||+|.||  .||++.+       .+..+++|.+...........+.+|+..+..+ +|+|++++++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   95 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA   95 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccChhhhhHHHhhCccCCc--ceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence            34455678999999999999  9999974       34679999998665344567788999999999 89999999999


Q ss_pred             EecCCccEEEEeccCCCCC
Q 045247          103 CLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~~~~~~lv~e~~~~g~L  121 (121)
                      +......++||||+++|+|
T Consensus        96 ~~~~~~~~lv~e~~~~~~L  114 (313)
T 1t46_A           96 CTIGGPTLVITEYCCYGDL  114 (313)
T ss_dssp             ECSSSSCEEEEECCTTEEH
T ss_pred             EecCCCcEEEEecCCCCCH
Confidence            9999999999999998764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.19  E-value=7.1e-11  Score=76.73  Aligned_cols=83  Identities=20%  Similarity=0.306  Sum_probs=72.3

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      .++|...+.||+|.+|  .||.+.. .+..+++|.+....  .....+.+|+..+..++|+|++++++.+......+++|
T Consensus         7 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFG--LVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT   82 (267)
T ss_dssp             GGGEEEEEEEEEETTE--EEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hhheeeeeEecCCCce--eEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence            3467888999999999  9999999 78889999988653  23467889999999999999999999999889999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        83 e~~~~~~L   90 (267)
T 3t9t_A           83 EFMEHGCL   90 (267)
T ss_dssp             CCCTTCBH
T ss_pred             eCCCCCcH
Confidence            99998864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.19  E-value=1.5e-10  Score=76.26  Aligned_cols=82  Identities=17%  Similarity=0.197  Sum_probs=68.4

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      .+.....||+|.||  .||++..  .+..+++|.+.... ......+..++..+..++|+|++++++.+......++|||
T Consensus        23 ~~~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   99 (295)
T 2clq_A           23 ENGDRVVLGKGTYG--IVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME   99 (295)
T ss_dssp             TTSSBCEEEECSSS--EEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCCcEEEeecCcE--EEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence            35556699999999  9999998  67889999987654 3445678899999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++++|
T Consensus       100 ~~~~~~L  106 (295)
T 2clq_A          100 QVPGGSL  106 (295)
T ss_dssp             CCSEEEH
T ss_pred             eCCCCCH
Confidence            9987653

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.19  E-value=2.4e-11  Score=81.79  Aligned_cols=90  Identities=22%  Similarity=0.323  Sum_probs=72.3

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeee
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIG  101 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~  101 (121)
                      ++....++|...+.||+|.||  .||++..       .+..+++|.+...........+.+|+..+..+ .|+|++++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  116 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFG--KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG  116 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSE--EEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccCHHHceeeeeecCCCCc--eeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            344556788899999999999  9999985       24569999987543233456788999999999 8999999999


Q ss_pred             EEecCCccEEEEeccCCCCC
Q 045247          102 CCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       102 ~~~~~~~~~lv~e~~~~g~L  121 (121)
                      .+......++||||+++|+|
T Consensus       117 ~~~~~~~~~lv~e~~~~g~L  136 (344)
T 1rjb_A          117 ACTLSGPIYLIFEYCCYGDL  136 (344)
T ss_dssp             EECSSSSCEEEEECCTTCBH
T ss_pred             EEeeCCccEEEEecCCCCcH
Confidence            99999999999999998875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.19  E-value=6.6e-11  Score=78.22  Aligned_cols=85  Identities=18%  Similarity=0.184  Sum_probs=70.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ..+.|...+.||+|.||  .||++..  .+..+++|.+.... ......+..++..+..++|+|++++++.+......++
T Consensus        17 ~~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   93 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFG--KVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI   93 (302)
T ss_dssp             GGGTEEEEEEEECSTTC--CEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred             CccceeecceeccCCCe--EEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence            34578889999999999  9999999  57889999887543 2335678889999999999999999999999899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++++|
T Consensus        94 v~e~~~~~~l  103 (302)
T 2j7t_A           94 MIEFCPGGAV  103 (302)
T ss_dssp             EEECCTTEEH
T ss_pred             EEEeCCCCcH
Confidence            9999988753

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.18  E-value=2.8e-11  Score=81.22  Aligned_cols=84  Identities=10%  Similarity=0.132  Sum_probs=70.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||.+..  .+..+++|.+.....  ......+..+...+..++|+|++++++.+......++
T Consensus         6 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            6 QDFQILRTLGTGSFG--RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             HHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence            468888999999999  9999988  688999999865320  1124567788889999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        84 v~e~~~gg~L   93 (318)
T 1fot_A           84 IMDYIEGGEL   93 (318)
T ss_dssp             EECCCCSCBH
T ss_pred             EEeCCCCCCH
Confidence            9999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.18  E-value=7.9e-11  Score=77.73  Aligned_cols=83  Identities=18%  Similarity=0.266  Sum_probs=70.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TP  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~  107 (121)
                      ++|...+.||+|.||  .||++.+      .+..+++|.+.... ......+.+|+..+..++|+|++++++++..  ..
T Consensus        10 ~~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFG--SVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             HHhhhhheeeccCCE--EEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            468888999999999  9999983      57889999987654 4446778899999999999999999998854  35


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        87 ~~~lv~e~~~~~~L  100 (295)
T 3ugc_A           87 NLKLIMEYLPYGSL  100 (295)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceEEEEEeCCCCCH
Confidence            68999999998875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.18  E-value=8.1e-11  Score=78.15  Aligned_cols=83  Identities=22%  Similarity=0.322  Sum_probs=70.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.+|  .||++..  ++..+++|.+...... .....+.+|+..+..++|+|++++++.+......++|
T Consensus         3 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            3 EKYEKIGKIGEGSYG--VVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             CCEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEeeEEeecCCe--EEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence            468888999999999  9999998  6889999988665422 2356678899999999999999999999999999999


Q ss_pred             EeccCCCC
Q 045247          113 FEYGEYRT  120 (121)
Q Consensus       113 ~e~~~~g~  120 (121)
                      |||+++++
T Consensus        81 ~e~~~~~~   88 (311)
T 4agu_A           81 FEYCDHTV   88 (311)
T ss_dssp             EECCSEEH
T ss_pred             EEeCCCch
Confidence            99998764

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.18  E-value=3.7e-11  Score=82.70  Aligned_cols=84  Identities=17%  Similarity=0.244  Sum_probs=69.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC--ccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP--IPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~--~~~l  111 (121)
                      +.|...+.||+|.||  .||++.+  .+..+++|.+...........+.+|+..+..++|+|++++++++....  ..++
T Consensus         9 ~~y~i~~~LG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A            9 HLWLLSDILGQGATA--NVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             EEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CceEEEEEEEcCCCe--EEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence            457888999999999  9999998  688999999875431223566788999999999999999999987654  6799


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        87 v~e~~~~g~L   96 (396)
T 4eut_A           87 IMEFCPCGSL   96 (396)
T ss_dssp             EECCCTTEEH
T ss_pred             EEecCCCCCH
Confidence            9999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.18  E-value=1.5e-10  Score=76.82  Aligned_cols=86  Identities=16%  Similarity=0.210  Sum_probs=71.8

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ..++|...+.||+|.||  .||++..  .+..+++|.+....  .......+.+++..+..++|+|++++++.+......
T Consensus        30 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFS--EVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             SGGGEEEEEEEECC--C--EEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             cccceEEEEeecCCCCc--eEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            34578899999999999  9999998  68889999987532  233456788999999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++|||+++|+|
T Consensus       108 ~lv~e~~~~~~L  119 (310)
T 2wqm_A          108 NIVLELADAGDL  119 (310)
T ss_dssp             EEEEECCCSCBH
T ss_pred             EEEEecCCCCCH
Confidence            999999998764

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.18  E-value=6e-11  Score=78.67  Aligned_cols=83  Identities=17%  Similarity=0.097  Sum_probs=69.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.||  .||.+..  .+..+++|.+.... ......+.+|+..+..++|+|++++.+.+......+++|
T Consensus         9 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            9 KTFIFMEVLGSGAFS--EVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeccCCCCc--eEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence            468888999999999  9999998  68889999987653 223456788999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++++|
T Consensus        86 e~~~~~~L   93 (304)
T 2jam_A           86 QLVSGGEL   93 (304)
T ss_dssp             CCCCSCBH
T ss_pred             EcCCCccH
Confidence            99998864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.18  E-value=1.2e-10  Score=79.85  Aligned_cols=86  Identities=14%  Similarity=0.208  Sum_probs=72.7

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe---------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW---------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCC  103 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~  103 (121)
                      ..+.|...+.||+|.||  .||++..         .+..+++|.+...........+.+|+..+..+ +|+|++++++++
T Consensus        67 ~~~~y~i~~~LG~G~~g--~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFG--QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             CGGGEEEEEEEEECSSE--EEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             chhheEeeeEEecCCCe--EEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            44578888999999999  9999986         12468999987665344567888999999999 899999999999


Q ss_pred             ecCCccEEEEeccCCCCC
Q 045247          104 LETPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~~~~~~lv~e~~~~g~L  121 (121)
                      ......++||||+++|+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L  162 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNL  162 (382)
T ss_dssp             CSSSSCEEEEECCTTCBH
T ss_pred             ccCCceEEEEEecCCCcH
Confidence            999999999999998875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.18  E-value=3.8e-11  Score=78.61  Aligned_cols=87  Identities=15%  Similarity=0.247  Sum_probs=72.3

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ++....++|...+.||+|.||  .||++.. .+..+++|.+....  .....+..|+..+..++|+|++++++++. .+.
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~   81 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEP   81 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTE--EEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred             hcccCHHhhhheeeecCCCCe--EEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCC
Confidence            344455678889999999999  9999998 67789999987653  23567889999999999999999998875 466


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .+++|||+++++|
T Consensus        82 ~~~v~e~~~~~~L   94 (279)
T 1qpc_A           82 IYIITEYMENGSL   94 (279)
T ss_dssp             CEEEEECCTTCBH
T ss_pred             cEEEEecCCCCCH
Confidence            8999999998864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.17  E-value=6e-11  Score=83.79  Aligned_cols=84  Identities=13%  Similarity=0.062  Sum_probs=67.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ..|...+.||+|.||  .||++..  .+..+++|.+..... ......+.+|+..++.++|||++++++++......++|
T Consensus        37 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           37 EMYQRVKKLGSGAYG--EVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHEEEEEEEECC-----EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCeEEeeEEecCCCE--EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            358889999999999  9999998  678899999875431 12246688999999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus       115 ~e~~~~g~L  123 (494)
T 3lij_A          115 MECYKGGEL  123 (494)
T ss_dssp             EECCCSCBH
T ss_pred             EecCCCCcH
Confidence            999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.17  E-value=3.8e-11  Score=81.58  Aligned_cols=84  Identities=11%  Similarity=0.084  Sum_probs=71.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||.+..  .+..+++|.+.....  ......+.+|...+..++|++++++++.+......++
T Consensus        41 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFG--RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHCEEEEEeecCcCc--EEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            468889999999999  9999998  688999999864320  1124567889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       119 v~e~~~gg~L  128 (350)
T 1rdq_E          119 VMEYVAGGEM  128 (350)
T ss_dssp             EEECCTTCBH
T ss_pred             EEcCCCCCcH
Confidence            9999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.17  E-value=1.7e-10  Score=76.08  Aligned_cols=81  Identities=17%  Similarity=0.296  Sum_probs=69.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+..... ......+.+|+..+..++|+|++++++.+......++|
T Consensus         2 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   79 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CSEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCceeeeEecCCCCe--EEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence            367788999999999  9999998  688899999875431 23356788899999999999999999999999999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      |||+++
T Consensus        80 ~e~~~~   85 (292)
T 3o0g_A           80 FEFCDQ   85 (292)
T ss_dssp             EECCSE
T ss_pred             EecCCC
Confidence            999875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.17  E-value=1.4e-10  Score=78.03  Aligned_cols=84  Identities=19%  Similarity=0.287  Sum_probs=69.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ..|...+.||+|.||  .||++..  .    +..+++|.+...........+..|+..+..++|+|++++++.+......
T Consensus        44 ~~~~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  121 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFG--EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM  121 (333)
T ss_dssp             TTEEEEEEEEECSSS--EEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             HHhhcccEEecCCCe--EEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence            345667899999999  9999987  2    2358999987654344466788999999999999999999999988999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus       122 ~lv~e~~~~~~L  133 (333)
T 1mqb_A          122 MIITEYMENGAL  133 (333)
T ss_dssp             EEEEECCTTEEH
T ss_pred             EEEEeCCCCCcH
Confidence            999999998764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.17  E-value=1.5e-10  Score=76.97  Aligned_cols=82  Identities=16%  Similarity=0.155  Sum_probs=68.8

Q ss_pred             CCCc-CCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHh-cCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDE-REVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQ-MDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~-~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~-l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .|.. .+.||+|.||  .||++..  .+..+++|.+.... ......+.+|+..+.. .+|+|++++++.+...+..++|
T Consensus        13 ~y~i~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   89 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHA--RVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV   89 (316)
T ss_dssp             SCEECCCCCCCCSSE--EEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eEEecCceecCCceE--EEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            4655 4789999999  9999987  78889999987653 2335678889988888 4699999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        90 ~e~~~~~~L   98 (316)
T 2ac3_A           90 FEKMRGGSI   98 (316)
T ss_dssp             EECCTTCBH
T ss_pred             EEcCCCCcH
Confidence            999998864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.16  E-value=9.1e-11  Score=76.45  Aligned_cols=84  Identities=24%  Similarity=0.381  Sum_probs=67.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCCh---hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPD---SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.||  .||++.+.+..+++|.+......   .....+..++..+..++|+|++++++.+......++|
T Consensus         7 ~~~~~~~~lg~G~~g--~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            7 AELTLEEIIGIGGFG--KVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TSEEEEEEEEEETTE--EEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hheeeeeeeccCCCe--EEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            468888999999999  99999988888999988754311   1246788899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++++|
T Consensus        85 ~e~~~~~~L   93 (271)
T 3dtc_A           85 MEFARGGPL   93 (271)
T ss_dssp             EECCTTEEH
T ss_pred             EEcCCCCCH
Confidence            999988754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.16  E-value=1.2e-10  Score=76.14  Aligned_cols=85  Identities=13%  Similarity=0.191  Sum_probs=70.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEe--cCCcc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCL--ETPIP  109 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~--~~~~~  109 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+.... .......+..++..+..++|+|++++++.+.  .....
T Consensus         5 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYG--RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             GGGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred             hhheeeehhccCCCCc--EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence            3468888999999999  9999998  68889999987643 2334567889999999999999999999874  35678


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus        83 ~lv~e~~~~~~L   94 (279)
T 2w5a_A           83 YIVMEYCEGGDL   94 (279)
T ss_dssp             EEEEECCTTEEH
T ss_pred             EEEEeCCCCCCH
Confidence            999999998764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.16  E-value=1.2e-10  Score=77.61  Aligned_cols=79  Identities=27%  Similarity=0.433  Sum_probs=67.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEec
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      ++|...+.||+|.||  .||++.+.+..+++|.+...   .....+..|+..+..++|+|++++++.+.  +..++||||
T Consensus         8 ~~~~~~~~lg~G~~g--~V~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~   80 (307)
T 2eva_A            8 KEIEVEEVVGRGAFG--VVCKAKWRAKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY   80 (307)
T ss_dssp             GGEEEEEEEECCSSS--EEEEEEETTEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred             hHeeeeeEeecCCCc--eEEEEEECCeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence            357788999999999  99999887788999998654   34567889999999999999999998875  458999999


Q ss_pred             cCCCCC
Q 045247          116 GEYRTL  121 (121)
Q Consensus       116 ~~~g~L  121 (121)
                      +++|+|
T Consensus        81 ~~~~~L   86 (307)
T 2eva_A           81 AEGGSL   86 (307)
T ss_dssp             CTTCBH
T ss_pred             CCCCCH
Confidence            998875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.16  E-value=2.6e-11  Score=83.43  Aligned_cols=84  Identities=8%  Similarity=0.089  Sum_probs=71.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||.+..  .+..+++|.+....  .......+.+|+.++..++|+|++++++++......++
T Consensus        15 ~~y~i~~~LG~G~fG--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           15 DHFEILRAIGKGSFG--KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             GGEEEEEEEECCTTC--CEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHeEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            468889999999999  9999998  67889999886432  01124678889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        93 v~e~~~gg~L  102 (384)
T 4fr4_A           93 VVDLLLGGDL  102 (384)
T ss_dssp             EECCCTTEEH
T ss_pred             EEecCCCCcH
Confidence            9999998864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.16  E-value=5.3e-11  Score=80.81  Aligned_cols=88  Identities=9%  Similarity=0.182  Sum_probs=70.3

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhc-CCCCcceeeeEEecC
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQM-DHKHILKLIGCCLET  106 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~  106 (121)
                      ....++|...+.||+|.||  .||++..  ++..+++|.+.....  .........+...+..+ +||+++++++.+...
T Consensus        13 ~~~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~   90 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFG--KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK   90 (345)
T ss_dssp             ---CTTEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             CCChHHeEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC
Confidence            3455789999999999999  9999998  688999999875310  11234566777777765 899999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus        91 ~~~~lv~E~~~gg~L  105 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDL  105 (345)
T ss_dssp             SEEEEEEECCTTCBH
T ss_pred             CEEEEEEeCCCCCcH
Confidence            999999999999875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.16  E-value=5.3e-11  Score=81.01  Aligned_cols=87  Identities=15%  Similarity=0.214  Sum_probs=70.5

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCC
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETP  107 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~  107 (121)
                      ...++|...+.||+|.||  .||++..  .+..+++|.+....  ..........+...+..+ .|++++++++++....
T Consensus        20 ~~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~   97 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFG--KVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD   97 (353)
T ss_dssp             ---CCEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CchhheEEEEEEeeCCCE--EEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence            345689999999999999  9999998  68899999987531  011245567788888877 5999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        98 ~~~lv~E~~~gg~L  111 (353)
T 3txo_A           98 RLFFVMEFVNGGDL  111 (353)
T ss_dssp             EEEEEEECCCSCBH
T ss_pred             EEEEEEeCCCCCcH
Confidence            99999999999875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.16  E-value=8.9e-11  Score=77.97  Aligned_cols=94  Identities=14%  Similarity=0.283  Sum_probs=76.4

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcc
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHIL   97 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~   97 (121)
                      +....+....++|...+.||+|.||  .||++.+       .+..+++|.+...........+..|+..+..+ +|+|++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv   94 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   94 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccccceecchhheeeeeEEcCCCce--eEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCee
Confidence            4455666677889999999999999  9999974       34679999998665344556788999999999 699999


Q ss_pred             eeeeEEecCC-ccEEEEeccCCCCC
Q 045247           98 KLIGCCLETP-IPILVFEYGEYRTL  121 (121)
Q Consensus        98 ~~~~~~~~~~-~~~lv~e~~~~g~L  121 (121)
                      ++++.+.... ..+++|||+++|+|
T Consensus        95 ~~~~~~~~~~~~~~lv~e~~~~~~L  119 (316)
T 2xir_A           95 NLLGACTKPGGPLMVIVEFCKFGNL  119 (316)
T ss_dssp             CEEEEECCTTSCCEEEEECCTTEEH
T ss_pred             eEEEEEecCCCceEEEEEcCCCCcH
Confidence            9999987644 58999999998764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.15  E-value=5.9e-11  Score=82.03  Aligned_cols=86  Identities=17%  Similarity=0.222  Sum_probs=69.7

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPI  108 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~  108 (121)
                      ..++|...+.||+|.||  .||++..  ++..+++|.+.....  ......+..+..++..+ +|||++++++++.....
T Consensus        50 ~~~~y~~~~~LG~G~fG--~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~  127 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYA--KVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR  127 (396)
T ss_dssp             CGGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             ChhHcEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence            34578889999999999  9999998  678899999875421  12234566777777766 79999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus       128 ~~lV~E~~~gg~L  140 (396)
T 4dc2_A          128 LFFVIEYVNGGDL  140 (396)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             EEEEEEcCCCCcH
Confidence            9999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.15  E-value=1.8e-10  Score=77.35  Aligned_cols=86  Identities=13%  Similarity=0.235  Sum_probs=72.1

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe---------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW---------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCC  103 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~  103 (121)
                      ..++|...+.||+|.||  .||++..         .+..+++|.+...........+..|+..+..+ +|+|++++++++
T Consensus        33 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFG--QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             CGGGEEEEEEEEECSSC--EEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CHhHeEEeeEEeecCce--eEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            34578889999999999  9999986         23568999987654344567788999999999 799999999999


Q ss_pred             ecCCccEEEEeccCCCCC
Q 045247          104 LETPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~~~~~~lv~e~~~~g~L  121 (121)
                      ......++||||+++|+|
T Consensus       111 ~~~~~~~lv~e~~~~~~L  128 (334)
T 2pvf_A          111 TQDGPLYVIVEYASKGNL  128 (334)
T ss_dssp             CSSSCCEEEEECCTTCBH
T ss_pred             ccCCceEEEEECCCCCcH
Confidence            998999999999998864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.15  E-value=2.8e-10  Score=76.02  Aligned_cols=83  Identities=19%  Similarity=0.248  Sum_probs=69.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--Cc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--PI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~~  108 (121)
                      .|...+.||+|.||  .||.+.+      .+..+++|.+...........+.+|+..+..++|+|++++++++...  ..
T Consensus        32 ~~~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           32 YLKKIRDLGEGHFG--KVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             GEEEEEEEEECSSE--EEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred             HHhhhheecCCCCe--EEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence            35888999999999  9988865      46789999998664344567789999999999999999999999763  56


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus       110 ~~lv~e~~~~~~L  122 (318)
T 3lxp_A          110 LQLVMEYVPLGSL  122 (318)
T ss_dssp             EEEEECCCTTCBH
T ss_pred             EEEEEecccCCcH
Confidence            8899999998864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.15  E-value=1.3e-10  Score=76.10  Aligned_cols=84  Identities=12%  Similarity=0.064  Sum_probs=71.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+......     .....+.+|+..+..++|+|++++++.+.....
T Consensus         5 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            5 DHYEMGEELGSGQFA--IVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhhHHhhcccCce--EEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence            357888999999999  9999998  6888999988754311     125678899999999999999999999999899


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++++|
T Consensus        83 ~~lv~e~~~~~~L   95 (283)
T 3bhy_A           83 VVLILELVSGGEL   95 (283)
T ss_dssp             EEEEEECCCSCBH
T ss_pred             EEEEEeecCCCcH
Confidence            9999999998764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.15  E-value=1.1e-10  Score=78.12  Aligned_cols=84  Identities=18%  Similarity=0.275  Sum_probs=68.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeE--EEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERL--ISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~--~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|.||  .||++..  .+..  +++|.+...........+..|+..+..+ +|+|++++++.+......+
T Consensus        25 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~  102 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY  102 (327)
T ss_dssp             GGCEEEEEEECGGGC--EEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             HHccceeeeecCCCc--eEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence            378889999999999  9999988  5654  4888877543223356688899999999 8999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus       103 lv~e~~~~~~L  113 (327)
T 1fvr_A          103 LAIEYAPHGNL  113 (327)
T ss_dssp             EEECCCTTCBH
T ss_pred             EEEecCCCCCH
Confidence            99999998875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.15  E-value=1.4e-10  Score=76.64  Aligned_cols=84  Identities=15%  Similarity=0.128  Sum_probs=67.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--P  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~  107 (121)
                      ..|...+.||+|.||  .||.+.+      .+..+++|.+...........+.+|+..+..++|+|++++++.+...  .
T Consensus        21 ~~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   98 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFG--KVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN   98 (302)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred             hhhhhhhccCCCCce--EEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence            357888999999999  9999983      57889999987553223356788999999999999999999999765  6


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        99 ~~~lv~e~~~~~~L  112 (302)
T 4e5w_A           99 GIKLIMEFLPSGSL  112 (302)
T ss_dssp             CEEEEEECCTTCBH
T ss_pred             eEEEEEEeCCCCcH
Confidence            68999999998875

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.15  E-value=2.2e-11  Score=80.45  Aligned_cols=87  Identities=13%  Similarity=0.149  Sum_probs=59.1

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ...++|...+.||+|.+|  .||++..  .+..+++|.+...........+.+++..+..++|+|++++++.+...+..+
T Consensus        12 i~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATA--VVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW   89 (303)
T ss_dssp             -CCCCCEEEEECC---CC--CEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred             cchhhhhhhheeccccce--EEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence            445689999999999999  9999987  678899998865432233456788888999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++++|
T Consensus        90 lv~e~~~~~~L  100 (303)
T 2vwi_A           90 LVMKLLSGGSV  100 (303)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEehhccCCch
Confidence            99999998864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.14  E-value=1e-10  Score=78.17  Aligned_cols=84  Identities=13%  Similarity=0.031  Sum_probs=71.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-----hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-----SVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+......     .....+.+|+..+..+.|+|++++++.+.....
T Consensus        12 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           12 DFYDIGEELGSGQFA--IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccEEEeeEeeecCCE--EEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            458888999999999  9999998  6888999988754311     125678899999999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++++|
T Consensus        90 ~~lv~e~~~~~~L  102 (321)
T 2a2a_A           90 VVLILELVSGGEL  102 (321)
T ss_dssp             EEEEECCCCSCBH
T ss_pred             EEEEEEcCCCCcH
Confidence            9999999998864

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.14  E-value=4.4e-11  Score=84.41  Aligned_cols=84  Identities=19%  Similarity=0.133  Sum_probs=71.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||.+..  ++..+++|.+.....  ......+.+|+..++.++|+|++++++++......++
T Consensus        16 ~~Y~l~~~LG~G~fg--~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           16 GHYILGDTLGVGTFG--KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             TTEEEEEEEECCSSS--CEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCEEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            578889999999999  9999998  788999999865320  0124568889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        94 v~E~~~gg~L  103 (476)
T 2y94_A           94 VMEYVSGGEL  103 (476)
T ss_dssp             EEECCSSEEH
T ss_pred             EEeCCCCCcH
Confidence            9999998764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.14  E-value=2.7e-10  Score=74.77  Aligned_cols=84  Identities=20%  Similarity=0.302  Sum_probs=68.7

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      .+.|...+.||+|.||  .||++.+ .    +..+++|.+...........+.+|+..+..++|+|++++++++ ..+..
T Consensus        14 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~   90 (281)
T 1mp8_A           14 RERIELGRCIGEGQFG--DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPV   90 (281)
T ss_dssp             GGGEEEEEEEEECSSS--EEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSC
T ss_pred             hHHeEEEeEeeecCCe--eEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCcc
Confidence            3568888999999999  9999987 2    3468899887654334467788999999999999999999987 45678


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus        91 ~lv~e~~~~~~L  102 (281)
T 1mp8_A           91 WIIMELCTLGEL  102 (281)
T ss_dssp             EEEEECCTTEEH
T ss_pred             EEEEecCCCCCH
Confidence            999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.14  E-value=1.9e-10  Score=76.69  Aligned_cols=81  Identities=21%  Similarity=0.321  Sum_probs=68.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.||  .||++.. .+..+++|.+..... ......+.+|+..+..++|+|++++++.+......++||
T Consensus        21 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           21 EKYQKLEKVGEGTYG--VVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             CEEEEEEEEEECSSC--EEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hhhHhhhhccCCCCe--EEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            568889999999999  9999999 888999999875431 122467888999999999999999999999989999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+++
T Consensus        99 e~~~~  103 (311)
T 3niz_A           99 EFMEK  103 (311)
T ss_dssp             ECCSE
T ss_pred             cCCCC
Confidence            99975

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.14  E-value=5.7e-11  Score=79.11  Aligned_cols=84  Identities=20%  Similarity=0.211  Sum_probs=69.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc---
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI---  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~---  108 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+.....  ......+.+|+..+..++|+|++++++.+.....   
T Consensus        12 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           12 DRYELGEILGFGGMS--EVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             CcEEEEEEEccCCCE--EEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            468889999999999  9999998  788999999976531  2234678889999999999999999998876544   


Q ss_pred             -cEEEEeccCCCCC
Q 045247          109 -PILVFEYGEYRTL  121 (121)
Q Consensus       109 -~~lv~e~~~~g~L  121 (121)
                       .++||||+++|+|
T Consensus        90 ~~~lv~e~~~g~~L  103 (311)
T 3ork_A           90 LPYIVMEYVDGVTL  103 (311)
T ss_dssp             EEEEEEECCCEEEH
T ss_pred             ccEEEEecCCCCCH
Confidence             4999999988764

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.14  E-value=1.4e-10  Score=84.89  Aligned_cols=84  Identities=15%  Similarity=0.192  Sum_probs=71.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe---CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc----
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW---QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI----  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~----  108 (121)
                      +.|...+.||.|.||  .||++.+   .+..+++|.+...........+..|+..+..++|+|++++++++.....    
T Consensus        80 ~~y~i~~~lg~G~~g--~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLG--WIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTEEEEEEEEEETTE--EEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             CceEEEEEEeeCCCe--EEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            678889999999999  9999988   4788999988765433445678889999999999999999999976554    


Q ss_pred             -cEEEEeccCCCCC
Q 045247          109 -PILVFEYGEYRTL  121 (121)
Q Consensus       109 -~~lv~e~~~~g~L  121 (121)
                       .++||||+++++|
T Consensus       158 ~~~lv~E~~~g~~L  171 (681)
T 2pzi_A          158 VGYIVMEYVGGQSL  171 (681)
T ss_dssp             EEEEEEECCCCEEC
T ss_pred             eeEEEEEeCCCCcH
Confidence             6999999998875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.14  E-value=2e-10  Score=76.49  Aligned_cols=85  Identities=12%  Similarity=0.098  Sum_probs=72.3

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .++|...+.||+|.|+  .||++..  .+..+++|.+.....  ......+.+++..+..++|+|++++++.+......+
T Consensus        33 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMG--DVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             -CCEEEEEEEEECSSS--EEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             eccEEEEEEEcCCCCe--eEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            4679999999999999  9999998  688899999875431  122467888999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++|||+++++|
T Consensus       111 lv~e~~~~~~L  121 (309)
T 2h34_A          111 VDMRLINGVDL  121 (309)
T ss_dssp             EEEECCCCEEH
T ss_pred             EEEEecCCCCH
Confidence            99999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.13  E-value=7.9e-11  Score=82.99  Aligned_cols=84  Identities=14%  Similarity=0.114  Sum_probs=71.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ..|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+..+..++|||++++++++......++|
T Consensus        22 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFG--EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHEEEEEEEECCSSS--EEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEeEEEeecCCE--EEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            468889999999999  9999998  68889999986431 012356788999999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus       100 ~e~~~~~~L  108 (486)
T 3mwu_A          100 GELYTGGEL  108 (486)
T ss_dssp             ECCCCSCBH
T ss_pred             EEcCCCCcH
Confidence            999998864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.13  E-value=2.9e-11  Score=80.81  Aligned_cols=92  Identities=15%  Similarity=0.208  Sum_probs=74.1

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeE
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGC  102 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~  102 (121)
                      ++..++....+.|...+.||.|.||  .||++..  .+..+++|.+....  .....+..++..+..+ +|+|++++++.
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~   89 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGA   89 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCE--EEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence            4445555667789999999999999  9999998  78889999987553  3345677888888888 79999999999


Q ss_pred             Eec------CCccEEEEeccCCCCC
Q 045247          103 CLE------TPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~------~~~~~lv~e~~~~g~L  121 (121)
                      +..      ....++||||+++|+|
T Consensus        90 ~~~~~~~~~~~~~~lv~e~~~~~~L  114 (326)
T 2x7f_A           90 FIKKNPPGMDDQLWLVMEFCGAGSV  114 (326)
T ss_dssp             EEECC--CCCCEEEEEEECCTTEEH
T ss_pred             EeeccCccccceEEEEEEcCCCCcH
Confidence            876      4578999999998754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.13  E-value=2e-10  Score=75.76  Aligned_cols=85  Identities=15%  Similarity=0.177  Sum_probs=71.8

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .+.|...+.||+|.||  .||++..  .+..+++|.+....  .......+..|+..+..++|+|++++++.+......+
T Consensus        14 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFA--KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TEEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             ccceEEEEEEeecCCE--EEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            3468888999999999  9999998  67789999886542  1234567888999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++|||+++++|
T Consensus        92 lv~e~~~~~~L  102 (294)
T 2rku_A           92 VVLELCRRRSL  102 (294)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEecCCCCCH
Confidence            99999998764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.12  E-value=3.5e-10  Score=74.41  Aligned_cols=83  Identities=17%  Similarity=0.267  Sum_probs=68.1

Q ss_pred             cCCCcCC-eeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDERE-VIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~-~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+ .||+|.||  .||++.+    .+..+++|.+...........+.+|+..+..++|+|++++++.+ ..+..+
T Consensus         9 ~~~~i~~~~lg~G~~g--~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~   85 (287)
T 1u59_A            9 DNLLIADIELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM   85 (287)
T ss_dssp             GGEEEEEEEEECCTTE--EEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred             HHhhhhhccccccCce--eEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence            3454555 89999999  9999986    46779999998764344567889999999999999999999998 556789


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++++|
T Consensus        86 lv~e~~~~~~L   96 (287)
T 1u59_A           86 LVMEMAGGGPL   96 (287)
T ss_dssp             EEEECCTTEEH
T ss_pred             EEEEeCCCCCH
Confidence            99999998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.12  E-value=1.5e-10  Score=81.48  Aligned_cols=84  Identities=17%  Similarity=0.101  Sum_probs=72.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+.....  ......+.+|+..+..++|||++++++++......++
T Consensus        26 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFG--EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CceEEeeEEecCCCE--EEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            458888999999999  9999998  788999999865431  2235678899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+.+|+|
T Consensus       104 v~e~~~~~~L  113 (484)
T 3nyv_A          104 VGEVYTGGEL  113 (484)
T ss_dssp             EECCCCSCBH
T ss_pred             EEecCCCCCH
Confidence            9999998864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.12  E-value=1.4e-10  Score=77.80  Aligned_cols=83  Identities=22%  Similarity=0.338  Sum_probs=70.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+..... ......+.+|+..+..++|+|++++++.+......++|
T Consensus        25 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           25 EKYENLGLVGEGSYG--MVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             GGEEEEEEGGGGTTS--SEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeEEeecCCE--EEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            468888999999999  9999998  688899998865442 23356678899999999999999999999999999999


Q ss_pred             EeccCCCC
Q 045247          113 FEYGEYRT  120 (121)
Q Consensus       113 ~e~~~~g~  120 (121)
                      |||++++.
T Consensus       103 ~e~~~~~~  110 (331)
T 4aaa_A          103 FEFVDHTI  110 (331)
T ss_dssp             EECCSEEH
T ss_pred             EecCCcch
Confidence            99998753

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.12  E-value=1.4e-10  Score=77.91  Aligned_cols=85  Identities=12%  Similarity=0.120  Sum_probs=65.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCC---hhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLP---DSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~---~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      .++|...+.||+|.||  .||++..     .+..+++|.+.....   ......+..|+..+..++|+|++++++.+...
T Consensus        16 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   93 (327)
T 3a62_A           16 PECFELLRVLGKGGYG--KVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG   93 (327)
T ss_dssp             GGGEEEEEEEEEETTE--EEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HHHeEEEEEEEeCCCE--EEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC
Confidence            3578899999999999  9999876     467899999876431   12245577889999999999999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus        94 ~~~~lv~e~~~~~~L  108 (327)
T 3a62_A           94 GKLYLILEYLSGGEL  108 (327)
T ss_dssp             SCEEEEEECCTTEEH
T ss_pred             CEEEEEEeCCCCCcH
Confidence            999999999998764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.12  E-value=3.3e-10  Score=75.87  Aligned_cols=83  Identities=16%  Similarity=0.110  Sum_probs=70.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TP  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~  107 (121)
                      ++|...+.||+|.||  .||++.+      .+..+++|.+.... ......+.+|+..+..++|+|++++++.+..  ..
T Consensus        23 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   99 (327)
T 3lxl_A           23 RHLKYISQLGKGNFG--SVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ   99 (327)
T ss_dssp             GGEEEEEEEEEETTE--EEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred             hhhhhhhhccCCCCe--EEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence            468888999999999  9999983      57789999988664 3445678999999999999999999998863  45


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++++|
T Consensus       100 ~~~lv~e~~~~~~L  113 (327)
T 3lxl_A          100 SLRLVMEYLPSGCL  113 (327)
T ss_dssp             EEEEEEECCTTCBH
T ss_pred             eEEEEEeecCCCCH
Confidence            68899999998864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.12  E-value=2.1e-10  Score=77.25  Aligned_cols=85  Identities=15%  Similarity=0.177  Sum_probs=72.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ...|...+.||+|.||  .||++..  .+..+++|.+....  .......+..|+..+..++|+|++++++.+......+
T Consensus        40 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFA--KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             TEEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCceEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence            4568889999999999  9999998  67789999886542  1234567888999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++++|
T Consensus       118 lv~e~~~~~~L  128 (335)
T 2owb_A          118 VVLELCRRRSL  128 (335)
T ss_dssp             EEECCCTTCBH
T ss_pred             EEEecCCCCCH
Confidence            99999998764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.11  E-value=7.7e-11  Score=77.20  Aligned_cols=85  Identities=14%  Similarity=0.237  Sum_probs=70.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .++|...+.||+|.+|  .||++..  .+..+++|.+......  .....+..++..+..++|+|++++++++......+
T Consensus         8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFG--NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY   85 (279)
T ss_dssp             GGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccEEEeeEEecCCCe--EEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence            3468888999999999  9999988  6778999988643201  11456788999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        86 lv~e~~~~~~l   96 (279)
T 3fdn_A           86 LILEYAPLGTV   96 (279)
T ss_dssp             EEECCCTTEEH
T ss_pred             EEEecCCCCcH
Confidence            99999998753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.11  E-value=1.4e-10  Score=77.16  Aligned_cols=85  Identities=13%  Similarity=0.102  Sum_probs=69.7

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe----cCC
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL----ETP  107 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~----~~~  107 (121)
                      ..++|...+.||+|.||  .||++..  .+..+++|.+.... ......+.+|+..+..++|+|++++++.+.    ...
T Consensus        27 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFS--YVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH  103 (317)
T ss_dssp             TTEEEEEEEEEEC--CE--EEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred             CCeEEEEEEEecCCCCe--EEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence            44579999999999999  9999998  78889999886543 345677889999999999999999999886    235


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus       104 ~~~lv~e~~~~~~L  117 (317)
T 2buj_A          104 EAWLLLPFFKRGTL  117 (317)
T ss_dssp             EEEEEEECCTTCBH
T ss_pred             eeEEEEEeCCCCcH
Confidence            78899999998864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.10  E-value=3.1e-10  Score=82.23  Aligned_cols=76  Identities=17%  Similarity=0.269  Sum_probs=64.3

Q ss_pred             eeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEeccCC
Q 045247           43 VIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEY  118 (121)
Q Consensus        43 ~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~~~  118 (121)
                      .||+|.||  .||++.+    .+..+++|.++..........+.+|+.++..++|+|++++++++.. +..++||||+++
T Consensus       343 ~LG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~  419 (613)
T 2ozo_A          343 ELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG  419 (613)
T ss_dssp             EEEECSSS--EEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             EEecCCCc--EEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCC
Confidence            68999999  9999987    3456899998765423446788999999999999999999999866 678999999999


Q ss_pred             CCC
Q 045247          119 RTL  121 (121)
Q Consensus       119 g~L  121 (121)
                      |+|
T Consensus       420 g~L  422 (613)
T 2ozo_A          420 GPL  422 (613)
T ss_dssp             CBH
T ss_pred             CcH
Confidence            875

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.10  E-value=1.7e-10  Score=75.30  Aligned_cols=85  Identities=19%  Similarity=0.124  Sum_probs=71.3

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .++|...+.||+|.+|  .||.+..  .+..+++|.+.....  ......+.+++..+..++|+|++++++.+......+
T Consensus        10 ~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   87 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFG--KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF   87 (276)
T ss_dssp             ETTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             eccEEEEeeecCCCCe--EEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEE
Confidence            3578889999999999  9999998  688999999864320  112456788999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++++|
T Consensus        88 lv~e~~~~~~L   98 (276)
T 2h6d_A           88 MVMEYVSGGEL   98 (276)
T ss_dssp             EEEECCCSCBH
T ss_pred             EEEeccCCCcH
Confidence            99999998764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.10  E-value=8.4e-11  Score=84.69  Aligned_cols=86  Identities=10%  Similarity=0.104  Sum_probs=72.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ..++|...+.||+|.||  .||.+..  ++..+++|.+.....  ......+..|..++..++|+|++++++.+......
T Consensus       182 ~~~~f~~~~~LG~G~fG--~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  259 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL  259 (576)
T ss_dssp             CGGGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cccceEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEE
Confidence            34568888999999999  9999998  788999999864320  11235578899999999999999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus       260 ~lVmEy~~gg~L  271 (576)
T 2acx_A          260 CLVLTLMNGGDL  271 (576)
T ss_dssp             EEEECCCCSCBH
T ss_pred             EEEEEcCCCCcH
Confidence            999999999875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.10  E-value=1.6e-10  Score=76.13  Aligned_cols=82  Identities=20%  Similarity=0.344  Sum_probs=69.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--------
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--------  105 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--------  105 (121)
                      ++|...+.||+|.||  .||.+..  .+..+++|.+...  ......+.+|+..+..++|+|++++++.+..        
T Consensus         6 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFG--QVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM   81 (303)
T ss_dssp             HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred             ccchhhheeccCCcE--EEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence            468888999999999  9999998  6888999998654  3446778899999999999999999988754        


Q ss_pred             -----CCccEEEEeccCCCCC
Q 045247          106 -----TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 -----~~~~~lv~e~~~~g~L  121 (121)
                           ....++||||+++|+|
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L  102 (303)
T 1zy4_A           82 TAVKKKSTLFIQMEYCENGTL  102 (303)
T ss_dssp             ----CEEEEEEEEECCCSCBH
T ss_pred             cccccCCceEEEEecCCCCCH
Confidence                 3567899999998864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.10  E-value=8.1e-11  Score=79.26  Aligned_cols=85  Identities=19%  Similarity=0.269  Sum_probs=72.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCCh----------------hHHHHHHHHHHHHHhcCCCCcce
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPD----------------SVYKYSINNIVYAAQMDHKHILK   98 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~----------------~~~~~~~~~~~~l~~l~h~~~~~   98 (121)
                      .++|...+.||+|.||  .||.+...+..+++|.+......                .....+.+|+..+..++|+|+++
T Consensus        30 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFN--KIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSC--CEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCe--EEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            4578999999999999  99999988889999988643200                01167889999999999999999


Q ss_pred             eeeEEecCCccEEEEeccCCCCC
Q 045247           99 LIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        99 ~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +++.+......++||||+++|+|
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L  130 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSI  130 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBS
T ss_pred             EEEEEeeCCeEEEEEeccCCCcH
Confidence            99999999999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.10  E-value=4.1e-11  Score=83.61  Aligned_cols=85  Identities=12%  Similarity=0.080  Sum_probs=64.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+....  .......+..++..+..++|+|++++++.+......+
T Consensus       147 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFG--KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC  224 (446)
T ss_dssp             GGGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred             hHHcEEeEEEeeCcCE--EEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence            3568889999999999  9999998  78899999987431  1223456678888899999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus       225 lv~e~~~~~~L  235 (446)
T 4ejn_A          225 FVMEYANGGEL  235 (446)
T ss_dssp             EEECCCSSCBH
T ss_pred             EEEeeCCCCcH
Confidence            99999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.10  E-value=1.5e-10  Score=78.41  Aligned_cols=92  Identities=14%  Similarity=0.061  Sum_probs=75.6

Q ss_pred             cccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-----CCCcc
Q 045247           25 IFSAKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-----HKHIL   97 (121)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-----h~~~~   97 (121)
                      .+++.+.....++|...+.||+|.||  .||++..  .+..+++|.+...  .........+...+..+.     |+|++
T Consensus        24 ~~~~~~g~~~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv   99 (360)
T 3llt_A           24 HFSWKKGMLLNNAFLVIRKMGDGTFG--RVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIV   99 (360)
T ss_dssp             SCCCCTTCEETTTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred             eeeeecceEecCEEEEEEEEcccCCe--EEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence            45555555667789999999999999  9999998  7788999998754  344566677888888876     99999


Q ss_pred             eeeeEEecCCccEEEEeccCCCCC
Q 045247           98 KLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        98 ~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      ++++.+...+..++||||+ +++|
T Consensus       100 ~~~~~~~~~~~~~lv~e~~-~~~L  122 (360)
T 3llt_A          100 KYHGKFMYYDHMCLIFEPL-GPSL  122 (360)
T ss_dssp             CEEEEEEETTEEEEEECCC-CCBH
T ss_pred             cccceeeECCeeEEEEcCC-CCCH
Confidence            9999999999999999999 6553

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.09  E-value=7.2e-11  Score=77.32  Aligned_cols=82  Identities=16%  Similarity=0.213  Sum_probs=68.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-CccEEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-PIPILVF  113 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-~~~~lv~  113 (121)
                      .++|...+.||+|.+|  .||++...+..+++|.+....   ....+.+|+..+..++|+|++++++.+... ...++||
T Consensus        20 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           20 MKELKLLQTIGKGEFG--DVMLGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             GGGEEEEEEEEECSSC--EEEEEEETTEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             hhhceEEeEEecCCCc--eEEEEEEcCCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            4578889999999999  999998888899999987542   456788899999999999999999987544 5789999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        95 e~~~~~~L  102 (278)
T 1byg_A           95 EYMAKGSL  102 (278)
T ss_dssp             CCCTTEEH
T ss_pred             ecCCCCCH
Confidence            99998764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.09  E-value=1.2e-10  Score=76.25  Aligned_cols=84  Identities=14%  Similarity=0.220  Sum_probs=70.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.|+  .||++..  .+..+++|.+.....  ......+.+++..+..++|+|++++++.+......++
T Consensus        11 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A           11 EDFKVGNLLGKGSFA--GVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             ccceeeeeecCCCce--EEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            468888999999999  9999998  788899999864320  0113678889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++++|
T Consensus        89 v~e~~~~~~L   98 (278)
T 3cok_A           89 VLEMCHNGEM   98 (278)
T ss_dssp             EEECCTTEEH
T ss_pred             EEecCCCCcH
Confidence            9999988653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.09  E-value=1.7e-09  Score=72.55  Aligned_cols=90  Identities=18%  Similarity=0.213  Sum_probs=72.0

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHh--cCCCCcceeeeEE
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQ--MDHKHILKLIGCC  103 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~--l~h~~~~~~~~~~  103 (121)
                      .+...-....++|...+.||+|.||  .||++...+..+++|.+...    ....+..+...+..  ++|+|++++++.+
T Consensus        32 ~~~~~~~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~  105 (342)
T 1b6c_B           32 LPLLVQRTIARTIVLQESIGKGRFG--EVWRGKWRGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAAD  105 (342)
T ss_dssp             SCHHHHHHHHHHCEEEEEEEEETTE--EEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEE
T ss_pred             CceeecccccccEEEEeeecCCCCc--EEEEEEEcCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeee
Confidence            3333334455689999999999999  99999888889999998643    23456677777766  7899999999999


Q ss_pred             ecCC----ccEEEEeccCCCCC
Q 045247          104 LETP----IPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~~~----~~~lv~e~~~~g~L  121 (121)
                      ....    ..++||||+++|+|
T Consensus       106 ~~~~~~~~~~~lv~e~~~~g~L  127 (342)
T 1b6c_B          106 NKDNGTWTQLWLVSDYHEHGSL  127 (342)
T ss_dssp             ECCCSSCCCEEEEECCCTTCBH
T ss_pred             cccCCccceeEEEEeecCCCcH
Confidence            8765    78999999999875

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.09  E-value=1.3e-10  Score=83.25  Aligned_cols=84  Identities=12%  Similarity=0.096  Sum_probs=71.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||.+..  ++..+++|.+......  .....+..|..++..++|++++++++.+......++
T Consensus       185 ~~f~~~~~LG~G~fG--~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFG--EVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             GGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hheEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence            567778899999999  9999998  6889999998653200  123567889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       263 VmE~~~gg~L  272 (543)
T 3c4z_A          263 VMTIMNGGDI  272 (543)
T ss_dssp             EECCCTTCBH
T ss_pred             EEEeccCCCH
Confidence            9999999875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.09  E-value=6.7e-10  Score=74.60  Aligned_cols=75  Identities=16%  Similarity=0.119  Sum_probs=65.1

Q ss_pred             CCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEEeccC
Q 045247           41 REVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      .+.||+|.||  .||++..  .+..+++|.+...    .......|+..+..+. |+|++++++++......++||||++
T Consensus        16 ~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~   89 (325)
T 3kn6_A           16 DKPLGEGSFS--ICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN   89 (325)
T ss_dssp             SCCSEEETTE--EEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             CCccccCCCe--EEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence            4789999999  9999998  6888999998653    3455677888888887 9999999999999999999999999


Q ss_pred             CCCC
Q 045247          118 YRTL  121 (121)
Q Consensus       118 ~g~L  121 (121)
                      +|+|
T Consensus        90 ~~~L   93 (325)
T 3kn6_A           90 GGEL   93 (325)
T ss_dssp             SCBH
T ss_pred             CCcH
Confidence            8864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.09  E-value=1e-10  Score=79.24  Aligned_cols=80  Identities=18%  Similarity=0.134  Sum_probs=66.3

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .++|...+.||.|.||  .||++..  ++..+++|.+.....     ....|+..+..+ .|+|++++++++......++
T Consensus        21 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l   93 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYS--VCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV   93 (342)
T ss_dssp             HHHEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred             cccEEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence            3468889999999999  9999998  688999999976531     123456666666 69999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        94 v~E~~~gg~L  103 (342)
T 2qr7_A           94 VTELMKGGEL  103 (342)
T ss_dssp             EECCCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999874

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.09  E-value=1.1e-10  Score=77.99  Aligned_cols=88  Identities=14%  Similarity=0.281  Sum_probs=64.7

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCe---EEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QER---LISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~---~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      ....++|...+.||+|.||  .||++..  .+.   .+++|.+.... .......+.+|+..+..++|+|++++++++..
T Consensus        19 ~i~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFG--SVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             BCC---CEEEEEEEEETTE--EEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             ccChhHeEEeceecccCCe--EEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            3445679999999999999  9999987  332   68999887543 13446778999999999999999999999977


Q ss_pred             CCcc------EEEEeccCCCCC
Q 045247          106 TPIP------ILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~------~lv~e~~~~g~L  121 (121)
                      ....      +++|||+++|+|
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L  118 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDL  118 (323)
T ss_dssp             C-------CEEEEEECCTTCBH
T ss_pred             cccccCCCccEEEEEeccCCcH
Confidence            6554      999999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.08  E-value=7.8e-10  Score=72.91  Aligned_cols=85  Identities=14%  Similarity=0.176  Sum_probs=71.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC----h----hHHHHHHHHHHHHHhcC-CCCcceeeeEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP----D----SVYKYSINNIVYAAQMD-HKHILKLIGCC  103 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~----~----~~~~~~~~~~~~l~~l~-h~~~~~~~~~~  103 (121)
                      .++|...+.||.|.+|  .||++..  .+..+++|.+.....    .    .....+..|+..+..+. |+|++++++.+
T Consensus        16 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           16 YENYEPKEILGRGVSS--VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             TTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhccceeeeecCCCce--EEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            3578889999999999  9999998  688999999875421    1    12356778899999996 99999999999


Q ss_pred             ecCCccEEEEeccCCCCC
Q 045247          104 LETPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~~~~~~lv~e~~~~g~L  121 (121)
                      ......++||||+++++|
T Consensus        94 ~~~~~~~lv~e~~~~~~L  111 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGEL  111 (298)
T ss_dssp             ECSSEEEEEEECCTTCBH
T ss_pred             ccCCeEEEEEeccCCCcH
Confidence            998999999999998764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.08  E-value=4.5e-10  Score=73.90  Aligned_cols=82  Identities=16%  Similarity=0.124  Sum_probs=67.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec----CCccE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE----TPIPI  110 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~----~~~~~  110 (121)
                      |...+.||+|.||  .||++..  .+..+++|.+.... .......+..++..+..++|+|++++++++..    ....+
T Consensus        28 ~~~~~~lg~G~~g--~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           28 LKFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             EEeeeeccCCCCe--EEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            6667789999999  9999998  67788999887543 23446778899999999999999999998764    35589


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus       106 lv~e~~~~~~L  116 (290)
T 1t4h_A          106 LVTELMTSGTL  116 (290)
T ss_dssp             EEEECCCSCBH
T ss_pred             EEEEecCCCCH
Confidence            99999998864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.08  E-value=1.9e-10  Score=76.42  Aligned_cols=83  Identities=17%  Similarity=0.274  Sum_probs=66.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ....|...+.||.|.||  .||++..  .+..+++|.+....   ....+..++..+..++|+|++++++.+......++
T Consensus        27 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYG--SVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI  101 (314)
T ss_dssp             ---CEEEEEECC----C--EEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             chhhhhhheeeccCCCe--EEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence            44568889999999999  9999998  68899999987643   23567889999999999999999999999899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++++|
T Consensus       102 v~e~~~~~~L  111 (314)
T 3com_A          102 VMEYCGAGSV  111 (314)
T ss_dssp             EEECCTTEEH
T ss_pred             EeecCCCCCH
Confidence            9999988754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.08  E-value=6.8e-10  Score=72.76  Aligned_cols=84  Identities=20%  Similarity=0.290  Sum_probs=69.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      .++|...+.||+|.||  .||++.+ .    +..+++|.+...........+.+|+..+..++|+|++++++++.. ...
T Consensus        11 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~   87 (281)
T 3cc6_A           11 REDVVLNRILGEGFFG--EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT   87 (281)
T ss_dssp             GGGEEEEEEEEECSSS--EEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred             ccceEEEEEEEecCCe--eEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence            3578888999999999  9999986 2    235899988765434456778899999999999999999998754 567


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++|||+++++|
T Consensus        88 ~~v~e~~~~~~L   99 (281)
T 3cc6_A           88 WIIMELYPYGEL   99 (281)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEEecCCCCCH
Confidence            999999998864

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.08  E-value=6.3e-10  Score=75.47  Aligned_cols=81  Identities=17%  Similarity=0.283  Sum_probs=69.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ..|...+.||+|.||  .||++..  .+..+++|.+.....  ......+.+|+..+..++|+|++++++++......++
T Consensus        54 ~~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           54 KLFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hheeeeeEEccCCCE--EEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            347788899999999  9999997  788899999875431  1224678899999999999999999999999999999


Q ss_pred             EEeccCC
Q 045247          112 VFEYGEY  118 (121)
Q Consensus       112 v~e~~~~  118 (121)
                      ||||+.+
T Consensus       132 v~e~~~g  138 (348)
T 1u5q_A          132 VMEYCLG  138 (348)
T ss_dssp             EEECCSE
T ss_pred             EEecCCC
Confidence            9999974

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.07  E-value=1.1e-10  Score=79.98  Aligned_cols=85  Identities=14%  Similarity=0.097  Sum_probs=63.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHH-HHhcCCCCcceeeeEEecCCcc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVY-AAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~-l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+.....  ......+..+... +..++|+|++++++.+......
T Consensus        37 ~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFG--KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             GGGEEEEEEEECCTTC--EEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             hhheEEEEEEeeCCCe--EEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            4578899999999999  9999998  678899999875421  1223445555554 4678899999999999999999


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus       115 ~lv~E~~~gg~L  126 (373)
T 2r5t_A          115 YFVLDYINGGEL  126 (373)
T ss_dssp             EEEEECCCSCBH
T ss_pred             EEEEeCCCCCcH
Confidence            999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.07  E-value=6.3e-10  Score=74.52  Aligned_cols=83  Identities=18%  Similarity=0.269  Sum_probs=69.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC--C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET--P  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~--~  107 (121)
                      ++|...+.||+|.||  .||++.+      .+..+++|.+.... ......+.+|+..+..++|+|++++.+.+...  .
T Consensus        41 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  117 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFG--SVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR  117 (326)
T ss_dssp             GGEEEEEEEECCSSE--EEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred             HHceeeeeeccCCCe--EEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence            457888999999999  9999983      57889999987654 34567789999999999999999999988654  3


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++++|
T Consensus       118 ~~~lv~e~~~~~~L  131 (326)
T 2w1i_A          118 NLKLIMEYLPYGSL  131 (326)
T ss_dssp             CCEEEECCCTTCBH
T ss_pred             ceEEEEECCCCCCH
Confidence            78999999998864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.07  E-value=2.4e-10  Score=75.18  Aligned_cols=85  Identities=14%  Similarity=0.119  Sum_probs=72.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .+.|...+.||+|.+|  .||++..  .+..+++|.+..... ......+.+++..+..++|+|++++++.+......++
T Consensus        21 ~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           21 AERYNIVCMLGKGSFG--EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhcceeeEEEcCCCCE--EEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            3568999999999999  9999998  678899999865421 2235678899999999999999999999999899999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ++||+++++|
T Consensus        99 v~e~~~~~~L  108 (287)
T 2wei_A           99 VGELYTGGEL  108 (287)
T ss_dssp             EECCCCSCBH
T ss_pred             EEEccCCCCH
Confidence            9999998764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.07  E-value=5.5e-10  Score=73.70  Aligned_cols=84  Identities=20%  Similarity=0.273  Sum_probs=68.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--C---CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe-cCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--Q---ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL-ETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~---~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~-~~~~~  109 (121)
                      ..|...+.||+|.||  .||++..  .   ...+++|.+...........+.+|+..++.++|+|++++++.+. .....
T Consensus        25 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           25 LIVHFNEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             EEEEEEEEEEEETTE--EEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             eehhhcceeeecCCc--eEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            347778999999999  9999986  1   23578888876543445677889999999999999999999864 45678


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++|||+++|+|
T Consensus       103 ~~v~e~~~~~~L  114 (298)
T 3f66_A          103 LVVLPYMKHGDL  114 (298)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEEeCCCCCCH
Confidence            999999998875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.07  E-value=4.5e-10  Score=75.39  Aligned_cols=85  Identities=15%  Similarity=0.289  Sum_probs=68.6

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ....++|...+.||+|.||  .||++..  .+..+++|.+...... .....+.+|+..+..++|+|++++++++.....
T Consensus        30 ~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYG--EVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR  107 (329)
T ss_dssp             --CGGGEEEEEEEEECSSS--EEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred             ccchhhEEEEEEEEecCCe--EEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence            3455679999999999999  9999988  7889999998755311 224567789999999999999999999999999


Q ss_pred             cEEEEeccCC
Q 045247          109 PILVFEYGEY  118 (121)
Q Consensus       109 ~~lv~e~~~~  118 (121)
                      .++||||+++
T Consensus       108 ~~lv~e~~~~  117 (329)
T 3gbz_A          108 LHLIFEYAEN  117 (329)
T ss_dssp             EEEEEECCSE
T ss_pred             EEEEEecCCC
Confidence            9999999874

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.07  E-value=1.8e-10  Score=75.64  Aligned_cols=84  Identities=14%  Similarity=0.203  Sum_probs=70.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.+|  .||.+..  .+..+++|.+.....  ......+.+++..+..++|+|++++++.+......++
T Consensus        14 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   91 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFG--NVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL   91 (284)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhceeeheecCCCCe--EEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence            468889999999999  9999998  678899998864320  0113567889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+++|+|
T Consensus        92 v~e~~~~~~L  101 (284)
T 2vgo_A           92 MLEFAPRGEL  101 (284)
T ss_dssp             EECCCTTEEH
T ss_pred             EEEeCCCCcH
Confidence            9999988754

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.07  E-value=2.9e-10  Score=78.85  Aligned_cols=85  Identities=12%  Similarity=0.033  Sum_probs=68.3

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-------hhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-------DSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-------~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      ..++|...+.||+|.||  .||++..  ++..+++|.+.....       ......+.+|+..+..++|+|++++++++.
T Consensus       133 ~~~~y~~~~~LG~G~~g--~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~  210 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACG--EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD  210 (419)
T ss_dssp             HHTTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred             hhccEEEEeEEeeCCCe--EEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            45689999999999999  9999998  678899999865320       011234778999999999999999999875


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      . ...++||||+++|+|
T Consensus       211 ~-~~~~lv~e~~~~g~L  226 (419)
T 3i6u_A          211 A-EDYYIVLELMEGGEL  226 (419)
T ss_dssp             S-SEEEEEEECCTTCBG
T ss_pred             c-CceEEEEEcCCCCcH
Confidence            4 567999999999875

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.06  E-value=3.7e-10  Score=74.37  Aligned_cols=81  Identities=21%  Similarity=0.239  Sum_probs=68.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.||  .||++.. .+..+++|.+...... .....+.+|+..+..++|+|++++++.+......++||
T Consensus         2 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYG--VVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (288)
T ss_dssp             CSEEEEEEEEEETTE--EEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             ccchhhhhcccCCCE--EEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence            357788999999999  9999998 7888999998754311 12356788999999999999999999999999999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+++
T Consensus        80 e~~~~   84 (288)
T 1ob3_A           80 EHLDQ   84 (288)
T ss_dssp             ECCSE
T ss_pred             EecCC
Confidence            99874

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.06  E-value=5.1e-10  Score=73.52  Aligned_cols=82  Identities=17%  Similarity=0.274  Sum_probs=67.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh--H----HHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS--V----YKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~--~----~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+.......  .    ...+.+|+..+..++|+|++++++.+... 
T Consensus        19 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-   95 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFG--LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-   95 (287)
T ss_dssp             TTEEEEEECCCCSSS--CEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT-
T ss_pred             ccceehhccccCCce--eEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC-
Confidence            478888999999999  9999998  78889999986543111  1    16788999999999999999999988554 


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                       .++||||+++|+|
T Consensus        96 -~~lv~e~~~~~~L  108 (287)
T 4f0f_A           96 -PRMVMEFVPCGDL  108 (287)
T ss_dssp             -TEEEEECCTTCBH
T ss_pred             -CeEEEEecCCCCH
Confidence             3799999998864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.06  E-value=1e-10  Score=79.18  Aligned_cols=81  Identities=20%  Similarity=0.247  Sum_probs=68.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+......  .....+.+|+..+..++|||++++++++......+
T Consensus         8 i~~Y~i~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFG--KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             ETTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cCCEEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            3578889999999999  9999998  7889999998643200  11346788999999999999999999999999999


Q ss_pred             EEEeccC
Q 045247          111 LVFEYGE  117 (121)
Q Consensus       111 lv~e~~~  117 (121)
                      +||||+.
T Consensus        86 lv~E~~~   92 (336)
T 3h4j_B           86 MVIEYAG   92 (336)
T ss_dssp             EEECCCC
T ss_pred             EEEECCC
Confidence            9999984

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.06  E-value=6.8e-10  Score=78.04  Aligned_cols=83  Identities=16%  Similarity=0.195  Sum_probs=69.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----  107 (121)
                      .+.|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+.+++.++|+|++++++++....    
T Consensus        61 ~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             ETTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             cCCeEEEEEeecCCCe--EEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence            4578889999999999  9999988  78899999997542 1334677889999999999999999999996543    


Q ss_pred             --ccEEEEeccCCC
Q 045247          108 --IPILVFEYGEYR  119 (121)
Q Consensus       108 --~~~lv~e~~~~g  119 (121)
                        ..++||||++++
T Consensus       139 ~~~~~lv~E~~~~~  152 (464)
T 3ttj_A          139 FQDVYLVMELMDAN  152 (464)
T ss_dssp             CCEEEEEEECCSEE
T ss_pred             CCeEEEEEeCCCCC
Confidence              469999999764

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.05  E-value=7.1e-10  Score=73.06  Aligned_cols=82  Identities=18%  Similarity=0.224  Sum_probs=66.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe--C---CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc-cEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--Q---ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI-PIL  111 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~---~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~-~~l  111 (121)
                      |...+.||+|.||  .||++.+  .   +..+++|.+...........+.+|+..++.++|+|++++++++...+. .++
T Consensus        23 ~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           23 THSDRVIGKGHFG--VVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEETTE--EEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             EccCceeccCCCc--eEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence            4556889999999  9999986  2   236899988765434456788899999999999999999999976555 499


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      +|||+.+|+|
T Consensus       101 v~e~~~~~~L  110 (298)
T 3pls_A          101 LLPYMCHGDL  110 (298)
T ss_dssp             EECCCTTCBH
T ss_pred             EEecccCCCH
Confidence            9999988864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.05  E-value=1.5e-10  Score=78.86  Aligned_cols=86  Identities=15%  Similarity=0.136  Sum_probs=70.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPI  108 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~  108 (121)
                      ..++|...+.||+|.||  .||.+..  ++..+++|.+.....  ......+..|...+..+ +|++++++.+++.....
T Consensus        18 ~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~   95 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFG--KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR   95 (353)
T ss_dssp             -CTTEEEEEEEEEETTE--EEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred             chHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence            45689999999999999  9999998  577899999875320  11245567788888777 69999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus        96 ~~lv~E~~~gg~L  108 (353)
T 2i0e_A           96 LYFVMEYVNGGDL  108 (353)
T ss_dssp             EEEEEECCCSCBH
T ss_pred             EEEEEeCCCCCcH
Confidence            9999999999875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.04  E-value=1.5e-09  Score=72.56  Aligned_cols=82  Identities=10%  Similarity=0.111  Sum_probs=67.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHH-HHHhcCCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIV-YAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~-~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+...........+..+.. .++.++|+|++++++++...+..++
T Consensus        21 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l   98 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYG--SVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI   98 (327)
T ss_dssp             SCSEEC-CEEEECSSE--EEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHHhhehheeccCCCE--EEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence            4578889999999999  9999998  688999999976543334445555555 6677889999999999999999999


Q ss_pred             EEeccCC
Q 045247          112 VFEYGEY  118 (121)
Q Consensus       112 v~e~~~~  118 (121)
                      ||||+++
T Consensus        99 v~e~~~~  105 (327)
T 3aln_A           99 CMELMST  105 (327)
T ss_dssp             EECCCSE
T ss_pred             EEeecCC
Confidence            9999875

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.04  E-value=4.8e-10  Score=74.91  Aligned_cols=83  Identities=12%  Similarity=0.041  Sum_probs=66.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-------hhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-------DSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-------~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+.....       ......+..|+..+..++|+|++++++++...
T Consensus        10 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A           10 DEYIMSKTLGSGACG--EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hceeEeeEEecCCCE--EEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            468889999999999  9999998  678899999865421       01124577899999999999999999988654


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                       ..++||||+++|+|
T Consensus        88 -~~~lv~e~~~~~~L  101 (322)
T 2ycf_A           88 -DYYIVLELMEGGEL  101 (322)
T ss_dssp             -SEEEEEECCTTEET
T ss_pred             -ceEEEEecCCCCcH
Confidence             48999999998765

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.04  E-value=2.6e-10  Score=76.00  Aligned_cols=81  Identities=12%  Similarity=0.079  Sum_probs=63.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+..... .........++..+..+ .|+|++++++++......++
T Consensus        57 ~~y~~~~~LG~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l  134 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYG--EVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL  134 (311)
T ss_dssp             HHEEEEEEEEEETTE--EEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hheeeeheeccCCCe--EEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence            468888899999999  9999998  688999998865431 22334445555545444 89999999999999999999


Q ss_pred             EEeccCC
Q 045247          112 VFEYGEY  118 (121)
Q Consensus       112 v~e~~~~  118 (121)
                      ||||+.+
T Consensus       135 v~e~~~~  141 (311)
T 3p1a_A          135 QTELCGP  141 (311)
T ss_dssp             EEECCCC
T ss_pred             EEeccCC
Confidence            9999943

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.04  E-value=1.1e-09  Score=80.03  Aligned_cols=86  Identities=21%  Similarity=0.306  Sum_probs=69.8

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .....|...+.||+|.||  .||++.+     .+..+++|.+...........+..|+..+..++|||++++++++. .+
T Consensus       387 i~~~~y~i~~~LG~G~fG--~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~  463 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFG--DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN  463 (656)
T ss_dssp             CCGGGEEEEEEEECCSSC--CEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred             cccccEEEeeEEeeCCCE--EEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence            344567778899999999  9999987     235688998876543344577899999999999999999999884 46


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus       464 ~~~lv~E~~~~g~L  477 (656)
T 2j0j_A          464 PVWIIMELCTLGEL  477 (656)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceEEEEEcCCCCcH
Confidence            78999999998875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.03  E-value=1.5e-09  Score=72.53  Aligned_cols=80  Identities=14%  Similarity=0.204  Sum_probs=68.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEec--CCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLE--TPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~--~~~~~  110 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+....    ...+.+|+..+..+. |+|++++.+++..  ....+
T Consensus        36 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~  109 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYS--EVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA  109 (330)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred             CceEEEEEecccCCe--EEEEEEECCCCcEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence            468888999999999  9999988  78889999987542    356788999999997 9999999999987  56789


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++|||+++++|
T Consensus       110 lv~e~~~~~~l  120 (330)
T 3nsz_A          110 LVFEHVNNTDF  120 (330)
T ss_dssp             EEEECCCCCCH
T ss_pred             EEEeccCchhH
Confidence            99999998864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.03  E-value=3.6e-10  Score=74.48  Aligned_cols=84  Identities=19%  Similarity=0.307  Sum_probs=66.2

Q ss_pred             hcCCCcCC-eeecCCCccceEEEEEe----CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           35 TNNYDERE-VIKQCDFYITKLYKGFW----QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        35 ~~~~~~~~-~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ...|...+ .||+|.||  .||++.+    .+..+++|.+..... ......+..++..+..++|+|++++++++ ..+.
T Consensus        15 ~~~y~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~   91 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES   91 (291)
T ss_dssp             GGGEEEEEEEEEECSSE--EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred             chhhhhccCccccccCe--eeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence            34566666 89999999  9999965    356799999875431 22356788999999999999999999998 5677


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++++|
T Consensus        92 ~~lv~e~~~~~~L  104 (291)
T 1xbb_A           92 WMLVMEMAELGPL  104 (291)
T ss_dssp             EEEEEECCTTEEH
T ss_pred             cEEEEEeCCCCCH
Confidence            8999999998754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.02  E-value=1.6e-09  Score=73.91  Aligned_cols=86  Identities=19%  Similarity=0.200  Sum_probs=71.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC---hh----HHHHHHHHHHHHHhc-CCCCcceeeeEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP---DS----VYKYSINNIVYAAQM-DHKHILKLIGCC  103 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~---~~----~~~~~~~~~~~l~~l-~h~~~~~~~~~~  103 (121)
                      ...+|...+.||.|.+|  .||++..  ++..+++|.++....   ..    ....+..|+..+..+ .|+|++++++.+
T Consensus        92 ~~~~y~~~~~lg~G~~g--~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           92 FYQKYDPKDVIGRGVSS--VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhcccceEEecCCCE--EEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            34568888999999999  9999998  688999999875431   11    135677888889888 799999999999


Q ss_pred             ecCCccEEEEeccCCCCC
Q 045247          104 LETPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~~~~~~lv~e~~~~g~L  121 (121)
                      ......++||||+++++|
T Consensus       170 ~~~~~~~lv~e~~~g~~L  187 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGEL  187 (365)
T ss_dssp             EBSSEEEEEECCCTTCBH
T ss_pred             eeCCEEEEEEEeCCCCcH
Confidence            999999999999998864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.02  E-value=1.4e-09  Score=71.95  Aligned_cols=83  Identities=13%  Similarity=0.113  Sum_probs=66.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC---ChhHHHHHHHHHHHHHhcCCCCcceeeeEEe--cCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL---PDSVYKYSINNIVYAAQMDHKHILKLIGCCL--ETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~--~~~  107 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+....   .......+.+|+..+..++|+|++++++++.  ...
T Consensus         4 ~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYG--KVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ   81 (305)
T ss_dssp             -CCBCCCCEEEECSSC--EEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred             ccceeEeeEEecCCCe--EEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence            4679999999999999  9999998  67889999986531   0123467889999999999999999999984  456


Q ss_pred             ccEEEEeccCCC
Q 045247          108 IPILVFEYGEYR  119 (121)
Q Consensus       108 ~~~lv~e~~~~g  119 (121)
                      ..++||||++++
T Consensus        82 ~~~lv~e~~~~~   93 (305)
T 2wtk_C           82 KMYMVMEYCVCG   93 (305)
T ss_dssp             CEEEEEECCSEE
T ss_pred             eEEEEehhccCC
Confidence            789999998865

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.02  E-value=4.7e-10  Score=76.83  Aligned_cols=82  Identities=21%  Similarity=0.296  Sum_probs=65.9

Q ss_pred             CCcCCeeecCCCccceEEEEEe--C-C--eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec-CCccEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--Q-E--RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE-TPIPIL  111 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~-~--~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-~~~~~l  111 (121)
                      |...+.||+|.||  .||++.+  . +  ..+++|.+...........+.+|+..+..++|+|++++++.+.. ....++
T Consensus        91 ~~~~~~LG~G~fg--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           91 VHFNEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEECCSSS--EEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             eecCcEeeeCCCe--EEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            4456789999999  9999987  2 2  35788888754434556788999999999999999999998754 467899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       169 v~e~~~~g~L  178 (373)
T 3c1x_A          169 VLPYMKHGDL  178 (373)
T ss_dssp             EEECCTTCBH
T ss_pred             EEECCCCCCH
Confidence            9999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.02  E-value=5.4e-10  Score=74.97  Aligned_cols=83  Identities=20%  Similarity=0.457  Sum_probs=62.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe----EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER----LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~----~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ++|...+.||+|.||  .||++.+  .+.    .+++|.+...........+.+|+..+..++|+|++++++++... ..
T Consensus        15 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~   91 (327)
T 3poz_A           15 TEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   91 (327)
T ss_dssp             GGEEEEEEEEEETTE--EEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SE
T ss_pred             HHcccceEEeeCCCe--EEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-Ce
Confidence            468888999999999  9999987  333    35788776543223357788999999999999999999999764 47


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++++||+++|+|
T Consensus        92 ~~v~e~~~~g~L  103 (327)
T 3poz_A           92 QLITQLMPFGCL  103 (327)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEEEecCCCcH
Confidence            899999998864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.01  E-value=1.1e-09  Score=73.32  Aligned_cols=84  Identities=17%  Similarity=0.224  Sum_probs=65.6

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHH--hcCCCCcceeeeEEecC---
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAA--QMDHKHILKLIGCCLET---  106 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~--~l~h~~~~~~~~~~~~~---  106 (121)
                      ....++|...+.||+|.||  .||++.+.+..+++|.+....    ......+...+.  .++|+|++++++.+...   
T Consensus        33 ~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~  106 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYG--EVWMGKWRGEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKGTGS  106 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTE--EEEEEEETTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred             cccccceEEEeEeecCCCe--EEEEEEECCceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence            3445679999999999999  999998888899999986542    223333444443  35899999999998776   


Q ss_pred             -CccEEEEeccCCCCC
Q 045247          107 -PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 -~~~~lv~e~~~~g~L  121 (121)
                       ...++||||+++|+|
T Consensus       107 ~~~~~lv~e~~~~g~L  122 (337)
T 3mdy_A          107 WTQLYLITDYHENGSL  122 (337)
T ss_dssp             GCEEEEEECCCTTCBH
T ss_pred             CCceEEEEeccCCCcH
Confidence             678999999999875

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.01  E-value=1.7e-09  Score=75.19  Aligned_cols=82  Identities=15%  Similarity=0.222  Sum_probs=69.5

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----  106 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----  106 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+..+..++|+|++++++++...     
T Consensus        25 ~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYG--YVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CTTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             cCCEEEEEEEeecCCE--EEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            4579999999999999  9999998  68889999997643 123457889999999999999999999998765     


Q ss_pred             CccEEEEeccCC
Q 045247          107 PIPILVFEYGEY  118 (121)
Q Consensus       107 ~~~~lv~e~~~~  118 (121)
                      ...++||||+.+
T Consensus       103 ~~~~lv~e~~~~  114 (432)
T 3n9x_A          103 DELYIVLEIADS  114 (432)
T ss_dssp             CCEEEEEECCSE
T ss_pred             CeEEEEEecCCc
Confidence            568999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.01  E-value=1.3e-09  Score=76.25  Aligned_cols=80  Identities=15%  Similarity=0.314  Sum_probs=58.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----P  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----~  107 (121)
                      +.|...+.||.|.||  .||++..  .+..+++|.+.... .......+.+|+.++..++|+|++++++++...     .
T Consensus        53 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYG--HVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             TTEEECCC---------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             CCeEEeeEeeecCCe--EEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            568899999999999  9999988  67889999987543 223457788999999999999999999998443     5


Q ss_pred             ccEEEEeccC
Q 045247          108 IPILVFEYGE  117 (121)
Q Consensus       108 ~~~lv~e~~~  117 (121)
                      ..++||||+.
T Consensus       131 ~~~lv~e~~~  140 (458)
T 3rp9_A          131 ELYVVLEIAD  140 (458)
T ss_dssp             CEEEEECCCS
T ss_pred             eEEEEEeccc
Confidence            6899999875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.00  E-value=2.2e-09  Score=73.23  Aligned_cols=82  Identities=16%  Similarity=0.191  Sum_probs=68.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----  107 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+..++.++|+|++++++++....    
T Consensus        24 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~  101 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQG--IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  101 (371)
T ss_dssp             ETTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred             hhheeEeeeeEecCCE--EEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence            4578999999999999  9999988  68889999987543 2234567889999999999999999999987654    


Q ss_pred             --ccEEEEeccCC
Q 045247          108 --IPILVFEYGEY  118 (121)
Q Consensus       108 --~~~lv~e~~~~  118 (121)
                        ..++||||+++
T Consensus       102 ~~~~~lv~e~~~~  114 (371)
T 2xrw_A          102 FQDVYIVMELMDA  114 (371)
T ss_dssp             CCEEEEEEECCSE
T ss_pred             ccceEEEEEcCCC
Confidence              67999999875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.00  E-value=3.7e-10  Score=75.74  Aligned_cols=80  Identities=13%  Similarity=-0.033  Sum_probs=67.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+....   ....+..|+..+..+ +|++++++++++......++|
T Consensus         9 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv   83 (330)
T 2izr_A            9 PNFRVGKKIGCGNFG--ELRLGKNLYTNEYVAIKLEPMKS---RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV   83 (330)
T ss_dssp             TTEEEEEECCC-CTT--SEEEEEETTTTEEEEEEEEETTC---SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEeeccCCc--eEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence            568889999999999  9999997  78899999987543   123467888899999 899999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+ +++|
T Consensus        84 ~e~~-~~~L   91 (330)
T 2izr_A           84 LELL-GPSL   91 (330)
T ss_dssp             EECC-CCBH
T ss_pred             EEeC-CCCH
Confidence            9999 6654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.00  E-value=1.1e-09  Score=72.61  Aligned_cols=80  Identities=16%  Similarity=0.140  Sum_probs=62.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEe---------
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCL---------  104 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~---------  104 (121)
                      +.|...+.||+|.+|  .||++..  .+..+++|.+.... ......+.+|+..+..++|+|++++++.+.         
T Consensus        11 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNG--LVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTEEEEEECC-------CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred             CceeEEEEeccCCCe--EEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence            468888999999999  9999998  58899999987653 344677889999999999999999998873         


Q ss_pred             -----cCCccEEEEeccCC
Q 045247          105 -----ETPIPILVFEYGEY  118 (121)
Q Consensus       105 -----~~~~~~lv~e~~~~  118 (121)
                           .....++||||+++
T Consensus        88 ~~~~~~~~~~~lv~e~~~~  106 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYMET  106 (320)
T ss_dssp             ---CCSCSEEEEEEECCSE
T ss_pred             cccccccCceeEEeeccCC
Confidence                 33678999999873

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.00  E-value=1.4e-09  Score=72.23  Aligned_cols=89  Identities=16%  Similarity=0.333  Sum_probs=66.7

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe-C----CeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW-Q----ERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~----~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      +....++|...+.||+|.||  .||++.. .    +..+++|.+.... .......+..++..+..++|+|++++++.+.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~  106 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFG--SVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI  106 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCC--CEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred             cccCHHHeeeccceeecCCe--EEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence            33445678888999999999  9999977 2    3478999987543 2334567889999999999999999999987


Q ss_pred             cCC-----ccEEEEeccCCCCC
Q 045247          105 ETP-----IPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~-----~~~lv~e~~~~g~L  121 (121)
                      ...     ..+++|||+++|+|
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L  128 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDL  128 (313)
T ss_dssp             C-------CEEEEEECCTTCBH
T ss_pred             eccccCCcccEEEEecccCCCH
Confidence            644     45999999998864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.00  E-value=1.3e-09  Score=71.80  Aligned_cols=81  Identities=19%  Similarity=0.290  Sum_probs=63.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHh--cCCCCcceeeeEEec----CCc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQ--MDHKHILKLIGCCLE----TPI  108 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~--l~h~~~~~~~~~~~~----~~~  108 (121)
                      .++|...+.||+|.||  .||++.+.+..+++|.+...    ....+..+...+..  ++|+|++++++.+..    ...
T Consensus         7 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            7 ARDITLLECVGKGRYG--EVWRGSWQGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             GGGCEEEEEEEECSSE--EEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEeeccCCCc--EEEEEEECCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence            3578889999999999  99999888889999998654    23334445555554  789999999988654    345


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus        81 ~~lv~e~~~~g~L   93 (301)
T 3q4u_A           81 LWLITHYHEMGSL   93 (301)
T ss_dssp             EEEEECCCTTCBH
T ss_pred             eEEehhhccCCCH
Confidence            8899999999875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.00  E-value=3e-09  Score=69.77  Aligned_cols=82  Identities=7%  Similarity=0.066  Sum_probs=64.5

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHH-HHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKY-SINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~-~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+........... +..+...+..+.|+|++++++.+......++
T Consensus         6 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l   83 (290)
T 3fme_A            6 ADDLEPIMELGRGAYG--VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI   83 (290)
T ss_dssp             GGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred             HHhhhhHHhcCCCCCe--EEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence            4578888999999999  9999998  788999999876542333333 3444445777899999999999999999999


Q ss_pred             EEeccCC
Q 045247          112 VFEYGEY  118 (121)
Q Consensus       112 v~e~~~~  118 (121)
                      ||||+++
T Consensus        84 v~e~~~~   90 (290)
T 3fme_A           84 CMELMDT   90 (290)
T ss_dssp             EEECCSE
T ss_pred             EEehhcc
Confidence            9999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.00  E-value=1.6e-10  Score=77.40  Aligned_cols=81  Identities=17%  Similarity=0.264  Sum_probs=65.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++++......++||
T Consensus         2 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYA--TVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   79 (324)
T ss_dssp             CSEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CceEEEEEEcCCCCE--EEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence            367788999999999  9999998  688899999875431111223456888899999999999999999999999999


Q ss_pred             eccCC
Q 045247          114 EYGEY  118 (121)
Q Consensus       114 e~~~~  118 (121)
                      ||+++
T Consensus        80 e~~~~   84 (324)
T 3mtl_A           80 EYLDK   84 (324)
T ss_dssp             ECCSE
T ss_pred             ccccc
Confidence            99874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.99  E-value=9e-10  Score=75.16  Aligned_cols=80  Identities=10%  Similarity=0.146  Sum_probs=61.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----  107 (121)
                      .+.|...+.||+|.||  .||++..  ++..+++|.+.... .......+.+|+..++.++|+|++++++++....    
T Consensus        24 ~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  101 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYG--AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD  101 (367)
T ss_dssp             BSSEEEEEEC--------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             cceEEEeEEeeecCCe--EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence            4678889999999999  9999998  78899999986543 1233567889999999999999999999987653    


Q ss_pred             --ccEEEEecc
Q 045247          108 --IPILVFEYG  116 (121)
Q Consensus       108 --~~~lv~e~~  116 (121)
                        ..++||||+
T Consensus       102 ~~~~~lv~e~~  112 (367)
T 1cm8_A          102 FTDFYLVMPFM  112 (367)
T ss_dssp             CCCCEEEEECC
T ss_pred             CceEEEEEecC
Confidence              459999998

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.99  E-value=5.6e-10  Score=74.88  Aligned_cols=87  Identities=11%  Similarity=0.062  Sum_probs=70.3

Q ss_pred             HHhcCCCcC-CeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCC
Q 045247           33 IATNNYDER-EVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMD-HKHILKLIGCCLETP  107 (121)
Q Consensus        33 ~~~~~~~~~-~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~  107 (121)
                      .-.+.|... +.||+|.||  .||++..  .+..+++|.+..... ......+..++..+..+. |++++++++.+....
T Consensus        25 ~~~~~y~~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~  102 (327)
T 3lm5_A           25 NFNNFYILTSKELGRGKFA--VVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS  102 (327)
T ss_dssp             HHHHHEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             hhhhEEeeccceeCCCCCe--EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence            334456555 789999999  9999998  688999998875431 223567888898888885 699999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus       103 ~~~lv~e~~~~~~L  116 (327)
T 3lm5_A          103 EIILILEYAAGGEI  116 (327)
T ss_dssp             EEEEEEECCTTEEG
T ss_pred             eEEEEEEecCCCcH
Confidence            99999999998764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.99  E-value=2.7e-09  Score=71.91  Aligned_cols=82  Identities=6%  Similarity=0.120  Sum_probs=68.6

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----C
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----P  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----~  107 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++++...     .
T Consensus        10 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYG--VVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             CTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred             ccceEEeeEEcCCCCe--EEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence            3578889999999999  9999998  68899999997543234456788999999999999999999987653     6


Q ss_pred             ccEEEEeccCC
Q 045247          108 IPILVFEYGEY  118 (121)
Q Consensus       108 ~~~lv~e~~~~  118 (121)
                      ..+++|||+.+
T Consensus        88 ~~~lv~e~~~~   98 (353)
T 2b9h_A           88 EVYIIQELMQT   98 (353)
T ss_dssp             CEEEEECCCSE
T ss_pred             eEEEEEeccCc
Confidence            78999999863

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.99  E-value=1.4e-09  Score=71.67  Aligned_cols=81  Identities=21%  Similarity=0.298  Sum_probs=65.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.+|  .||.+..  .+..+++|.+..... ......+.+|+..+..++|+|++++++.+......++|
T Consensus         3 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   80 (299)
T ss_dssp             TTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhhhhhhccCCCe--eEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence            468888999999999  9999998  688899998875431 11235678899999999999999999999999999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      |||+++
T Consensus        81 ~e~~~~   86 (299)
T 2r3i_A           81 FEFLHQ   86 (299)
T ss_dssp             EECCSE
T ss_pred             EEcccC
Confidence            999863

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.98  E-value=2.4e-10  Score=83.52  Aligned_cols=84  Identities=13%  Similarity=0.182  Sum_probs=69.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec------CC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE------TP  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~------~~  107 (121)
                      +.|...+.||.|.||  .||++..  .+..+++|.+...........+..|+..+..++|+|++++++++..      ..
T Consensus        14 grY~i~~~LG~G~fG--~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           14 GPWEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ---CCCCCCCBCSSS--BCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCeEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            579999999999999  9999988  6788999998765434456778999999999999999999988754      66


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        92 ~~~LVmEy~~ggsL  105 (676)
T 3qa8_A           92 LPLLAMEYCEGGDL  105 (676)
T ss_dssp             SCCCEEECCSSCBH
T ss_pred             eEEEEEEeCCCCCH
Confidence            78999999998875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.98  E-value=1.9e-09  Score=78.49  Aligned_cols=77  Identities=19%  Similarity=0.319  Sum_probs=63.3

Q ss_pred             CeeecCCCccceEEEEEe----CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW----QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||++.+    .+..+++|.+.... .......+..|+.++..++|+|++++++++.. +..++||||+
T Consensus       375 ~~LG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~  451 (635)
T 4fl3_A          375 KELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA  451 (635)
T ss_dssp             EEEEECSSE--EEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred             CEeccCCCE--EEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence            369999999  9999976    34679999987543 12335789999999999999999999998864 5688999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus       452 ~~g~L  456 (635)
T 4fl3_A          452 ELGPL  456 (635)
T ss_dssp             TTEEH
T ss_pred             CCCCH
Confidence            98864

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.98  E-value=6.1e-10  Score=72.84  Aligned_cols=79  Identities=19%  Similarity=0.290  Sum_probs=65.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--------
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--------  105 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--------  105 (121)
                      .+|...+.||+|.||  .||++..  .+..+++|.+....     ..+.+|+..+..++|+|++++.+++..        
T Consensus        11 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (284)
T 2a19_B           11 MDFKEIELIGSGGFG--QVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS   83 (284)
T ss_dssp             HHEEEEEEEECSSSC--CEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred             cccceeeeeccCCce--EEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence            468888999999999  9999998  68889999987653     235678888999999999999998753        


Q ss_pred             --------CCccEEEEeccCCCCC
Q 045247          106 --------TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 --------~~~~~lv~e~~~~g~L  121 (121)
                              ....++||||+++|+|
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~~L  107 (284)
T 2a19_B           84 SKNSSRSKTKCLFIQMEFCDKGTL  107 (284)
T ss_dssp             -----CCEEEEEEEEECCCCSCBH
T ss_pred             cccccccCcceEEEEEeccCCCCH
Confidence                    3457899999998864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.97  E-value=1.3e-09  Score=73.76  Aligned_cols=89  Identities=16%  Similarity=0.163  Sum_probs=72.5

Q ss_pred             HHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCC----------hhHHHHHHHHHHHHHhcCCCCc
Q 045247           28 AKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLP----------DSVYKYSINNIVYAAQMDHKHI   96 (121)
Q Consensus        28 ~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~----------~~~~~~~~~~~~~l~~l~h~~~   96 (121)
                      ..++....++|...+.||+|.||  .||++.. .+..+++|.+.....          ......+.+|+..+..++|+|+
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYG--AVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHhccceEEeEEeccCCCE--EEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            45667778899999999999999  9999988 888899998864321          1123678899999999999999


Q ss_pred             ceeeeEEec-----CCccEEEEeccCC
Q 045247           97 LKLIGCCLE-----TPIPILVFEYGEY  118 (121)
Q Consensus        97 ~~~~~~~~~-----~~~~~lv~e~~~~  118 (121)
                      +++++++..     ....++||||+++
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~~  118 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMRT  118 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCSE
T ss_pred             cceeeeEEeccCCCcceEEEEEccCCC
Confidence            999998854     2357999999874

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.97  E-value=3.6e-09  Score=72.49  Aligned_cols=83  Identities=16%  Similarity=0.266  Sum_probs=61.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCC--
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETP--  107 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~--  107 (121)
                      ..++|...+.||.|.||  .||++..  .+..+++|.+.... .........+|+..+..+. |+|++++++++...+  
T Consensus         7 ~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~   84 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYG--IVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR   84 (388)
T ss_dssp             HHTTEEEEEC---------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred             ccCceEEEEEeeeCCCe--EEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence            45679999999999999  9999988  78899999986543 2344667788999999997 999999999997543  


Q ss_pred             ccEEEEeccCC
Q 045247          108 IPILVFEYGEY  118 (121)
Q Consensus       108 ~~~lv~e~~~~  118 (121)
                      ..++||||+++
T Consensus        85 ~~~lv~e~~~~   95 (388)
T 3oz6_A           85 DVYLVFDYMET   95 (388)
T ss_dssp             CEEEEEECCSE
T ss_pred             EEEEEecccCc
Confidence            68999999974

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.97  E-value=3.9e-09  Score=71.71  Aligned_cols=83  Identities=10%  Similarity=0.097  Sum_probs=69.4

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----  106 (121)
                      ..+.|...+.||+|.||  .||++..  .+..+++|.+...........+.+|+..+..++|+|++++++++...     
T Consensus        25 ~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  102 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYG--MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM  102 (364)
T ss_dssp             CTTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred             ccccEEEEEEeecCCCe--EEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence            34578999999999999  9999988  78889999997654334457788999999999999999999988654     


Q ss_pred             CccEEEEeccCC
Q 045247          107 PIPILVFEYGEY  118 (121)
Q Consensus       107 ~~~~lv~e~~~~  118 (121)
                      ...++||||+++
T Consensus       103 ~~~~iv~e~~~~  114 (364)
T 3qyz_A          103 KDVYIVQDLMET  114 (364)
T ss_dssp             CCEEEEEECCSE
T ss_pred             ceEEEEEcccCc
Confidence            368999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.96  E-value=4.8e-10  Score=75.13  Aligned_cols=83  Identities=19%  Similarity=0.388  Sum_probs=64.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe----EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER----LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~----~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ++|...+.||+|.||  .||++.+  .+.    .+++|.+...........+..++..+..++|+|++++++++. ....
T Consensus        13 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   89 (325)
T 3kex_A           13 TELRKLKVLGSGVFG--TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL   89 (325)
T ss_dssp             TTEEEEEEEECCSSC--EEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred             hHceeeeeeeecCCc--eEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence            467888999999999  9999987  343    377787754321122345667788899999999999999885 4678


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus        90 ~~v~e~~~~~~L  101 (325)
T 3kex_A           90 QLVTQYLPLGSL  101 (325)
T ss_dssp             EEEEECCTTCBS
T ss_pred             EEEEEeCCCCCH
Confidence            999999999876

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.96  E-value=2.8e-09  Score=70.21  Aligned_cols=85  Identities=20%  Similarity=0.285  Sum_probs=68.4

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ...+.|...+.||+|.||  .||++.+.+ .+++|.+.... .......+.+|+..+..++|+|++++++.. .....++
T Consensus        21 i~~~~y~~~~~lG~G~~g--~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l   96 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFG--TVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI   96 (289)
T ss_dssp             CCTTSCEEEEEEEECSSE--EEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             cCccceeeeeEecCCCCe--EEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence            344578999999999999  999998733 48889887554 234457789999999999999999999865 5567899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++++|
T Consensus        97 v~e~~~~~~L  106 (289)
T 3og7_A           97 VTQWCEGSSL  106 (289)
T ss_dssp             EEECCCEEEH
T ss_pred             EEEecCCCcH
Confidence            9999987653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.96  E-value=2.6e-09  Score=72.16  Aligned_cols=83  Identities=16%  Similarity=0.316  Sum_probs=63.8

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh----HHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS----VYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~----~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      ..+.|...+.||+|.||  .||.+..  .+..+++|.+.......    ....+.+|+..+..++|+|++++++.+....
T Consensus         8 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFA--TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -----CEEEEEEEETTE--EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HhcccEEEeEEeecCCE--EEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            34578999999999999  9999998  68889999987542111    1245778999999999999999999999989


Q ss_pred             ccEEEEeccCC
Q 045247          108 IPILVFEYGEY  118 (121)
Q Consensus       108 ~~~lv~e~~~~  118 (121)
                      ..++||||+++
T Consensus        86 ~~~lv~e~~~~   96 (346)
T 1ua2_A           86 NISLVFDFMET   96 (346)
T ss_dssp             CCEEEEECCSE
T ss_pred             ceEEEEEcCCC
Confidence            99999999875

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.95  E-value=8.5e-11  Score=79.04  Aligned_cols=84  Identities=11%  Similarity=0.160  Sum_probs=64.8

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCC-------hhHHHHHHHHHHHHHhcC---------CCCcce
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLP-------DSVYKYSINNIVYAAQMD---------HKHILK   98 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~~~~~l~~l~---------h~~~~~   98 (121)
                      .++|...+.||+|.||  .||++..++..+++|.+.....       ......+.+|+.+++.++         |+|+++
T Consensus        19 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFG--EVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTE--EEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCce--EEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            3568889999999999  9999998888999999875431       112366777887777764         788877


Q ss_pred             eeeEEe------------------------------cCCccEEEEeccCCCC
Q 045247           99 LIGCCL------------------------------ETPIPILVFEYGEYRT  120 (121)
Q Consensus        99 ~~~~~~------------------------------~~~~~~lv~e~~~~g~  120 (121)
                      +.+.+.                              .....++||||+++|+
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~  148 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGI  148 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCE
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCc
Confidence            776643                              1678999999999885

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.95  E-value=5.1e-09  Score=71.41  Aligned_cols=82  Identities=10%  Similarity=0.198  Sum_probs=68.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc--
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP--  109 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~--  109 (121)
                      .+.|...+.||+|.||  .||++..  .+..+++|.+..... ......+.+++..+..++|+|++++++++......  
T Consensus        41 ~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYG--SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             ETTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred             cccEEEEeEEecCCCe--EEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence            3578889999999999  9999998  788999999976532 23357788999999999999999999999776554  


Q ss_pred             ----EEEEeccCC
Q 045247          110 ----ILVFEYGEY  118 (121)
Q Consensus       110 ----~lv~e~~~~  118 (121)
                          ++||||+.+
T Consensus       119 ~~~~~lv~e~~~~  131 (371)
T 4exu_A          119 FYDFYLVMPFMQT  131 (371)
T ss_dssp             CCCCEEEEECCCE
T ss_pred             ceeEEEEEccccc
Confidence                999999873

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.94  E-value=4.4e-09  Score=71.08  Aligned_cols=81  Identities=10%  Similarity=0.194  Sum_probs=67.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc----
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI----  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~----  108 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+..... ......+.+++..+..++|+|++++++++.....    
T Consensus        24 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           24 KTYVSPTHVGSGAYG--SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             ceEEEeeeEecCCCe--EEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            578889999999999  9999998  688999999876431 2335678899999999999999999999976554    


Q ss_pred             --cEEEEeccCC
Q 045247          109 --PILVFEYGEY  118 (121)
Q Consensus       109 --~~lv~e~~~~  118 (121)
                        .+++|||+.+
T Consensus       102 ~~~~lv~e~~~~  113 (353)
T 3coi_A          102 YDFYLVMPFMQT  113 (353)
T ss_dssp             CCCEEEEECCSE
T ss_pred             eeEEEEeccccC
Confidence              4999999873

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.94  E-value=2.2e-09  Score=72.58  Aligned_cols=87  Identities=13%  Similarity=0.079  Sum_probs=58.4

Q ss_pred             HHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC
Q 045247           29 KELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET  106 (121)
Q Consensus        29 ~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~  106 (121)
                      .......++|...+.||+|.||  .||++..  .+..+++|.+....  ........++..+..++|+|++++++++...
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~   91 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFG--TVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTL   91 (360)
T ss_dssp             HHHHHHHTTEEEC------------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred             hhchhhccceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence            4455667899999999999999  9999998  68889999886542  2223455666777888999999999998653


Q ss_pred             Cc-------cEEEEeccCCC
Q 045247          107 PI-------PILVFEYGEYR  119 (121)
Q Consensus       107 ~~-------~~lv~e~~~~g  119 (121)
                      ..       .++||||++++
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~  111 (360)
T 3e3p_A           92 GERDRRDIYLNVVMEYVPDT  111 (360)
T ss_dssp             CSSCTTCEEEEEEEECCSCB
T ss_pred             ccccccceeEEEEeeccccc
Confidence            32       78999999864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.93  E-value=1.8e-09  Score=73.35  Aligned_cols=82  Identities=12%  Similarity=0.050  Sum_probs=65.6

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEE-----e--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC---CCCcceeeeEE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGF-----W--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD---HKHILKLIGCC  103 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~-----~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~---h~~~~~~~~~~  103 (121)
                      ....|...+.||+|.||  .||++.     .  .+..+++|.+....    ...+..+...+..++   |++++.+++.+
T Consensus        63 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~  136 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFA--QVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSAH  136 (365)
T ss_dssp             SSSEEEEEEEEEECSSE--EEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred             CCEEEEEEEEeeccCCE--EEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence            34567778899999999  999994     2  67789999987653    234555666666665   89999999999


Q ss_pred             ecCCccEEEEeccCCCCC
Q 045247          104 LETPIPILVFEYGEYRTL  121 (121)
Q Consensus       104 ~~~~~~~lv~e~~~~g~L  121 (121)
                      ...+..++||||+++|+|
T Consensus       137 ~~~~~~~lv~e~~~~g~L  154 (365)
T 3e7e_A          137 LFQNGSVLVGELYSYGTL  154 (365)
T ss_dssp             ECSSCEEEEECCCCSCBH
T ss_pred             ecCCCcEEEEeccCCCcH
Confidence            999999999999999875

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.93  E-value=3.9e-09  Score=72.06  Aligned_cols=82  Identities=12%  Similarity=0.131  Sum_probs=64.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC----
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLET----  106 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~----  106 (121)
                      ..+.|...+.||+|.||  .||++..  .+..+++|.+.... .......+.+|+..+..++|+|++++++++...    
T Consensus        27 ~~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  104 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE  104 (367)
T ss_dssp             EETTEEEEEECC----C--CEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred             CCCceEEeeEEeecCCe--EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence            34679999999999999  9999988  78899999987543 223457788999999999999999999998653    


Q ss_pred             --CccEEEEeccC
Q 045247          107 --PIPILVFEYGE  117 (121)
Q Consensus       107 --~~~~lv~e~~~  117 (121)
                        ...++++|++.
T Consensus       105 ~~~~~~lv~e~~~  117 (367)
T 2fst_X          105 EFNDVYLVTHLMG  117 (367)
T ss_dssp             GCCCCEEEEECCC
T ss_pred             cCCeEEEEecccC
Confidence              56799999873

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.91  E-value=4.2e-10  Score=75.91  Aligned_cols=83  Identities=12%  Similarity=0.097  Sum_probs=69.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-------hHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-------SVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-------~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      .+.|...+.||+|.||  .||++..  .+..+++|.+......       .....+..|+..+..++|+|++++++++..
T Consensus        23 ~~~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFG--FVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHHEEEEEECSSSSSC--SEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccceEEEeEEEecCCE--EEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            4568889999999999  9999987  7888999998764310       112345678899999999999999999999


Q ss_pred             CCccEEEEeccCCC
Q 045247          106 TPIPILVFEYGEYR  119 (121)
Q Consensus       106 ~~~~~lv~e~~~~g  119 (121)
                      ....++||||+..|
T Consensus       101 ~~~~~lv~e~~~~g  114 (335)
T 3dls_A          101 QGFFQLVMEKHGSG  114 (335)
T ss_dssp             SSEEEEEEECCTTS
T ss_pred             CCEEEEEEEeCCCC
Confidence            99999999998766

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.90  E-value=2.3e-09  Score=71.98  Aligned_cols=83  Identities=20%  Similarity=0.457  Sum_probs=67.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe----EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER----LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~----~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      ++|...+.||+|.||  .||++.+  .+.    .+++|.+...........+.+|+..+..++|+|++++++.+... ..
T Consensus        15 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~   91 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   91 (327)
T ss_dssp             TTEEEEEEEEECSSE--EEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SE
T ss_pred             hHceEEEEeeeCCCe--EEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cc
Confidence            468889999999999  9999987  333    45777776543234467788999999999999999999998764 47


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++++++++|+|
T Consensus        92 ~~v~~~~~~g~L  103 (327)
T 3lzb_A           92 QLITQLMPFGCL  103 (327)
T ss_dssp             EEEECCCSSCBH
T ss_pred             eEEEEecCCCcH
Confidence            899999998864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.90  E-value=3.7e-09  Score=71.32  Aligned_cols=82  Identities=12%  Similarity=0.164  Sum_probs=68.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCC--CCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDH--KHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h--~~~~~~~~~~~~~~~~~l  111 (121)
                      +.|...+.||+|.||  .||++.. .+..+++|.+.... .......+.+|+..+..+.|  +|++++++++......++
T Consensus         9 ~~y~i~~~lG~G~~g--~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            9 RIYSILKQIGSGGSS--KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             CEEEEEEEESCCSSE--EEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEEEEEEecCCCe--EEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            458888999999999  9999988 78889999987543 23335778899999999986  899999999999999999


Q ss_pred             EEeccCCCC
Q 045247          112 VFEYGEYRT  120 (121)
Q Consensus       112 v~e~~~~g~  120 (121)
                      |||+ .+|+
T Consensus        87 v~e~-~~~~   94 (343)
T 3dbq_A           87 VMEC-GNID   94 (343)
T ss_dssp             EECC-CSEE
T ss_pred             EEeC-CCCC
Confidence            9995 4443

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.90  E-value=1.9e-09  Score=72.20  Aligned_cols=83  Identities=25%  Similarity=0.247  Sum_probs=60.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec-----CCcc
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE-----TPIP  109 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-----~~~~  109 (121)
                      .++|...+.||+|.||  .||++...+..+++|.+....  ........++..+..+.|+|++++++.+..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYG--AVYKGSLDERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSE--EEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCe--EEEEEEECCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            3478889999999999  999998888899999987542  111112233333445889999999875532     2356


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      ++||||+++|+|
T Consensus        88 ~lv~e~~~~g~L   99 (336)
T 3g2f_A           88 LLVMEYYPNGSL   99 (336)
T ss_dssp             EEEECCCTTCBH
T ss_pred             EEEEecCCCCcH
Confidence            899999999875

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.89  E-value=1.1e-09  Score=80.24  Aligned_cols=86  Identities=15%  Similarity=0.142  Sum_probs=69.4

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPI  108 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~  108 (121)
                      ..++|...+.||+|.||  .||++..  .+..+++|.+....  ..........+..++..+ +|++++.+.+++...+.
T Consensus       339 ~~~~f~~~~~LG~G~fG--~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~  416 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFG--KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR  416 (674)
T ss_dssp             -CTTEEEEEESSBTTTB--CEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred             cccceEEEEEEccCCCE--EEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence            45678889999999999  9999998  67889999987431  011234566777778776 59999999999999899


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus       417 ~~lV~E~~~gg~L  429 (674)
T 3pfq_A          417 LYFVMEYVNGGDL  429 (674)
T ss_dssp             EEEEEECCCSCBH
T ss_pred             EEEEEeCcCCCcH
Confidence            9999999999875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.89  E-value=4e-09  Score=71.19  Aligned_cols=81  Identities=19%  Similarity=0.281  Sum_probs=66.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecC------
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLET------  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~------  106 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+..... ......+.+|+..+..++|+|++++++.+...      
T Consensus        17 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFG--EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             GGEEEEEECSSCSTT--SEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cceeEEEEEecCCCc--EEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            578899999999999  9999998  688999998865431 12245677899999999999999999998763      


Q ss_pred             --CccEEEEeccCC
Q 045247          107 --PIPILVFEYGEY  118 (121)
Q Consensus       107 --~~~~lv~e~~~~  118 (121)
                        ...++||||+++
T Consensus        95 ~~~~~~lv~e~~~~  108 (351)
T 3mi9_A           95 CKGSIYLVFDFCEH  108 (351)
T ss_dssp             --CEEEEEEECCSE
T ss_pred             CCceEEEEEeccCC
Confidence              458899999874

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.89  E-value=2.1e-09  Score=73.46  Aligned_cols=83  Identities=11%  Similarity=0.030  Sum_probs=61.8

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHH---HHHHhcCCCCcceee-------e
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNI---VYAAQMDHKHILKLI-------G  101 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~---~~l~~l~h~~~~~~~-------~  101 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+....  .......+.+|+   ..++.++|||+++++       +
T Consensus        73 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           73 RTLVRGTVLGQEDPY--AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             EEEEEEEEEEEETTE--EEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             ceEEEcceeecCCCE--EEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            446668899999999  9999997  68899999987432  123456788888   555666899999987       5


Q ss_pred             EEecCC-----------------ccEEEEeccCCCCC
Q 045247          102 CCLETP-----------------IPILVFEYGEYRTL  121 (121)
Q Consensus       102 ~~~~~~-----------------~~~lv~e~~~~g~L  121 (121)
                      .+....                 ..+++|||+ +|+|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L  186 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNL  186 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEH
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCH
Confidence            544332                 378999999 4553

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.88  E-value=1.9e-09  Score=73.74  Aligned_cols=67  Identities=16%  Similarity=0.252  Sum_probs=52.2

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      ....+.|...+.||+|.||  .||++..  ++..+++|.+....     ....+|+..++.++|+|++++++++..
T Consensus         3 ~~~~~~y~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFG--IVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             ---CTTEEEEEEEECC-CE--EEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEEEeccCE--EEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHHcCCCCccchhheeee
Confidence            3455679999999999999  9999988  78899999886543     112357888999999999999998843

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.88  E-value=5.5e-09  Score=69.13  Aligned_cols=78  Identities=12%  Similarity=0.146  Sum_probs=62.1

Q ss_pred             cCCCcC-CeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHH-HhcCCCCcceeeeEEec----CC
Q 045247           36 NNYDER-EVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYA-AQMDHKHILKLIGCCLE----TP  107 (121)
Q Consensus        36 ~~~~~~-~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l-~~l~h~~~~~~~~~~~~----~~  107 (121)
                      ++|... +.||.|.||  .||++..  .+..+++|.+...      .....++..+ ....|+|++++++.+..    ..
T Consensus        17 ~~y~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~   88 (299)
T 3m2w_A           17 DDYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK   88 (299)
T ss_dssp             GTEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             cchhhcCcccccCCCe--EEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence            456665 779999999  9999998  6889999998653      2345566655 55689999999998876    56


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        89 ~~~lv~e~~~~~~L  102 (299)
T 3m2w_A           89 CLLIVMECLDGGEL  102 (299)
T ss_dssp             EEEEEECCCCSCBH
T ss_pred             eEEEEEeecCCCcH
Confidence            78999999998864

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.87  E-value=4.6e-09  Score=72.49  Aligned_cols=77  Identities=12%  Similarity=0.138  Sum_probs=59.7

Q ss_pred             CCCcC-CeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHH-HhcCCCCcceeeeEEec----CCc
Q 045247           37 NYDER-EVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYA-AQMDHKHILKLIGCCLE----TPI  108 (121)
Q Consensus        37 ~~~~~-~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l-~~l~h~~~~~~~~~~~~----~~~  108 (121)
                      +|... +.||.|.||  .||++..  ++..+++|.++..      ..+.+++..+ ...+|+|++++++++..    ...
T Consensus        62 ~y~~~~~~LG~G~~g--~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           62 DYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             TEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cceeccceeeeccCe--EEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            44444 689999999  9999998  6888999998643      2345566655 44579999999998865    566


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus       134 ~~lv~E~~~gg~L  146 (400)
T 1nxk_A          134 LLIVMECLDGGEL  146 (400)
T ss_dssp             EEEEEECCCSEEH
T ss_pred             EEEEEEeCCCCcH
Confidence            8999999998764

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.87  E-value=7.6e-09  Score=71.15  Aligned_cols=81  Identities=12%  Similarity=0.159  Sum_probs=67.5

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcC--CCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESL-PDSVYKYSINNIVYAAQMD--HKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~--h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .|...+.||+|.||  .||++.. .+..+++|.+.... .......+.+|+..+..+.  |+|++++++++......++|
T Consensus        57 ~y~~~~~LG~G~fg--~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           57 IYSILKQIGSGGSS--KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             EEEEEEEEECCSSE--EEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             ceEEEEEEccCCCe--EEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            48888999999999  9999988 78889999987543 2334577889999999986  59999999999998999999


Q ss_pred             EeccCCCC
Q 045247          113 FEYGEYRT  120 (121)
Q Consensus       113 ~e~~~~g~  120 (121)
                      ||+ .+++
T Consensus       135 ~E~-~~~~  141 (390)
T 2zmd_A          135 MEC-GNID  141 (390)
T ss_dssp             EEC-CSEE
T ss_pred             Eec-CCCC
Confidence            994 4443

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.87  E-value=1.4e-10  Score=77.16  Aligned_cols=93  Identities=19%  Similarity=0.353  Sum_probs=72.9

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEe
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCL  104 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~  104 (121)
                      ....++....++|...+.||+|.||  .||++.+.+ .+++|.+..... ......+.+++..+..++|+|++++++.+.
T Consensus        23 ~~~~~~~i~~~~~~~~~~lg~G~~g--~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   99 (319)
T 2y4i_B           23 IFLQEWDIPFEQLEIGELIGKGRFG--QVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM   99 (319)
T ss_dssp             CCGGGSSSCCSCEECCCBCCCSSSS--EEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE
T ss_pred             cccccccCCHHHeEEeeEeccCCce--EEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe
Confidence            3445666667889999999999999  999998833 378888764321 112344667788899999999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....+++|||+++++|
T Consensus       100 ~~~~~~iv~e~~~~~~L  116 (319)
T 2y4i_B          100 SPPHLAIITSLCKGRTL  116 (319)
T ss_dssp             CSSCEEEECBCCCSEEH
T ss_pred             cCCceEEEeecccCCcH
Confidence            99999999999988754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.86  E-value=4.4e-09  Score=69.03  Aligned_cols=83  Identities=17%  Similarity=0.263  Sum_probs=60.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe---CC--eEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW---QE--RLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~---~~--~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ++|...+.||+|.|+  .||++.+   .+  ..+++|.+....  .......+.+++..+..++|+|++++++.+... .
T Consensus        18 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~   94 (291)
T 1u46_A           18 KDLRLLEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-P   94 (291)
T ss_dssp             GGEEEEEECC----C--CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-S
T ss_pred             hHeeeeeeecCCCce--eEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC-C
Confidence            468889999999999  9999986   22  257888876542  123457788999999999999999999998764 4


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++++||+++|+|
T Consensus        95 ~~~v~e~~~~~~L  107 (291)
T 1u46_A           95 MKMVTELAPLGSL  107 (291)
T ss_dssp             CEEEEECCTTCBH
T ss_pred             ceeeEecccCCCH
Confidence            8999999998864

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.86  E-value=5.4e-09  Score=68.80  Aligned_cols=80  Identities=11%  Similarity=0.000  Sum_probs=66.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.+|  .||++..  .+..+++|.+....   ....+..++..+..+ +|++++++++++......++|
T Consensus        10 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   84 (298)
T 1csn_A           10 VHYKVGRRIGEGSFG--VIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   84 (298)
T ss_dssp             TTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             cceEEEEEEeecCCE--EEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence            468889999999999  9999997  78899999886543   223466778888888 699999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+ +++|
T Consensus        85 ~e~~-~~~L   92 (298)
T 1csn_A           85 IDLL-GPSL   92 (298)
T ss_dssp             EECC-CCBH
T ss_pred             EEec-CCCH
Confidence            9999 6654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.86  E-value=2.1e-09  Score=71.82  Aligned_cols=84  Identities=13%  Similarity=0.178  Sum_probs=67.7

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEec---
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLE---  105 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~---  105 (121)
                      .....+|...+.||+|.||  .||++..  .+..+++|.+.... ......+..++..+..+. |+|++++++++..   
T Consensus        24 ~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~  100 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFA--FVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE  100 (337)
T ss_dssp             EETTEEEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred             eccCceEEEEEEEccCCce--EEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence            3344578899999999999  9999998  78889999886553 344667888999999996 9999999999842   


Q ss_pred             -----CCccEEEEeccCC
Q 045247          106 -----TPIPILVFEYGEY  118 (121)
Q Consensus       106 -----~~~~~lv~e~~~~  118 (121)
                           ....+++|||+.+
T Consensus       101 ~~~~~~~~~~lv~e~~~g  118 (337)
T 3ll6_A          101 ESDTGQAEFLLLTELCKG  118 (337)
T ss_dssp             TSTTSSEEEEEEEECCSE
T ss_pred             ccccCCceEEEEEEecCC
Confidence                 3347899999863

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.84  E-value=8.9e-10  Score=74.79  Aligned_cols=84  Identities=10%  Similarity=0.079  Sum_probs=67.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCC---hhHHHHHHHHHHHHHhc-CCCCcceeeeEEecC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLP---DSVYKYSINNIVYAAQM-DHKHILKLIGCCLET  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~---~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~  106 (121)
                      .+|...+.||+|.||  .||++..     .+..+++|.+.....   ......+..|+..+..+ +|+|++++.+++...
T Consensus        54 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  131 (355)
T 1vzo_A           54 ENFELLKVLGTGAYG--KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  131 (355)
T ss_dssp             GGEEEEEEEEETTTE--EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             cceEEEEEeccCCCE--EEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence            578889999999999  9999987     467899998864310   11123455677778888 599999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...++||||+++|+|
T Consensus       132 ~~~~lv~e~~~~~~L  146 (355)
T 1vzo_A          132 TKLHLILDYINGGEL  146 (355)
T ss_dssp             TEEEEEECCCCSCBH
T ss_pred             ceEEEEeecCCCCCH
Confidence            999999999998875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.81  E-value=2.3e-08  Score=66.31  Aligned_cols=82  Identities=13%  Similarity=0.099  Sum_probs=59.7

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHH-HHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKY-SINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~-~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ..++|...+.||.|.|+  .||++..  .+..+++|.+........... +......+..++|+|++++++++......+
T Consensus        23 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCG--QVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             CGGGEEEEEEC--------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhccccccceeeecCCe--eEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            34578888999999999  9999998  688999999976542333333 334445677789999999999999999999


Q ss_pred             EEEeccC
Q 045247          111 LVFEYGE  117 (121)
Q Consensus       111 lv~e~~~  117 (121)
                      +||||+.
T Consensus       101 lv~e~~~  107 (318)
T 2dyl_A          101 IAMELMG  107 (318)
T ss_dssp             EEECCCS
T ss_pred             EEEeccC
Confidence            9999983

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.80  E-value=2.8e-09  Score=70.87  Aligned_cols=92  Identities=11%  Similarity=0.156  Sum_probs=71.9

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcC--CCCcceeee
Q 045247           26 FSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESL-PDSVYKYSINNIVYAAQMD--HKHILKLIG  101 (121)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~--h~~~~~~~~  101 (121)
                      +.+..+......|...+.||+|.||  .||++.. .+..+++|.+.... .......+.+|+..+..+.  |++++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~   95 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSS--KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD   95 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSE--EEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCE--EEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEE
Confidence            3344444455678999999999999  9999998 78889999987543 2334577888999999887  599999999


Q ss_pred             EEecCCccEEEEeccCCCC
Q 045247          102 CCLETPIPILVFEYGEYRT  120 (121)
Q Consensus       102 ~~~~~~~~~lv~e~~~~g~  120 (121)
                      .+......+++||+ .+++
T Consensus        96 ~~~~~~~~~lv~e~-~~~~  113 (313)
T 3cek_A           96 YEITDQYIYMVMEC-GNID  113 (313)
T ss_dssp             EEECSSEEEEEECC-CSEE
T ss_pred             EeecCCEEEEEEec-CCCc
Confidence            99999999999994 4443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.79  E-value=1.5e-08  Score=69.09  Aligned_cols=79  Identities=9%  Similarity=0.150  Sum_probs=65.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC--------CCCcceeeeEEe-
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD--------HKHILKLIGCCL-  104 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~--------h~~~~~~~~~~~-  104 (121)
                      +.|...+.||+|.||  .||++..  .+..+++|.+...  ......+.+|+..+..+.        |+|++++++.+. 
T Consensus        37 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           37 GRYHVIRKLGWGHFS--TVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             CeEEEEEEeeecCCe--eEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            568889999999999  9999988  6888999999754  344567788888888775        778999999887 


Q ss_pred             ---cCCccEEEEeccCC
Q 045247          105 ---ETPIPILVFEYGEY  118 (121)
Q Consensus       105 ---~~~~~~lv~e~~~~  118 (121)
                         .....++||||+.+
T Consensus       113 ~~~~~~~~~lv~e~~~~  129 (397)
T 1wak_A          113 SGVNGTHICMVFEVLGH  129 (397)
T ss_dssp             EETTEEEEEEEECCCCC
T ss_pred             cCCCCceEEEEEeccCc
Confidence               45678999999954

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.78  E-value=1.7e-08  Score=67.37  Aligned_cols=80  Identities=13%  Similarity=0.120  Sum_probs=65.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe---CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCC------CcceeeeEEecC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW---QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHK------HILKLIGCCLET  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~------~~~~~~~~~~~~  106 (121)
                      +.|...+.||+|.||  .||++..   .+..+++|.+...  ......+..|+..+..+.|+      +++++++.+...
T Consensus        14 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~   89 (339)
T 1z57_A           14 ARYEIVDTLGEGAFG--KVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   89 (339)
T ss_dssp             TTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CceEEEEEEecCCCe--EEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence            478889999999999  9999986   5788999998754  24456677788878777655      489999999999


Q ss_pred             CccEEEEeccCCCC
Q 045247          107 PIPILVFEYGEYRT  120 (121)
Q Consensus       107 ~~~~lv~e~~~~g~  120 (121)
                      ...++||||+ +++
T Consensus        90 ~~~~lv~e~~-~~~  102 (339)
T 1z57_A           90 GHICIVFELL-GLS  102 (339)
T ss_dssp             TEEEEEEECC-CCB
T ss_pred             CcEEEEEcCC-CCC
Confidence            9999999999 444

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.75  E-value=7.2e-08  Score=67.08  Aligned_cols=79  Identities=10%  Similarity=0.154  Sum_probs=64.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc------CCCCcceeeeEEecCC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQM------DHKHILKLIGCCLETP  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l------~h~~~~~~~~~~~~~~  107 (121)
                      ..|...+.||+|.||  .||++..  .+..+++|.+...  ......+..++..+..+      .|+|++++++.+....
T Consensus        97 ~ry~~~~~LG~G~fg--~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFG--QVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             TTEEEEEEEEESSSE--EEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             CcEEEEEEcccCccE--EEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            458888999999999  9999988  6889999999764  23345566666666655      5779999999999999


Q ss_pred             ccEEEEeccCC
Q 045247          108 IPILVFEYGEY  118 (121)
Q Consensus       108 ~~~lv~e~~~~  118 (121)
                      ..++||||+.+
T Consensus       173 ~~~lv~e~~~~  183 (429)
T 3kvw_A          173 HICMTFELLSM  183 (429)
T ss_dssp             EEEEEECCCCC
T ss_pred             eEEEEEeccCC
Confidence            99999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.74  E-value=3.9e-09  Score=70.06  Aligned_cols=88  Identities=10%  Similarity=0.068  Sum_probs=59.9

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh-----HHHHHHHHHHHHHhc----CCCCccee
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS-----VYKYSINNIVYAAQM----DHKHILKL   99 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~-----~~~~~~~~~~~l~~l----~h~~~~~~   99 (121)
                      .....++|...+.||+|.||  .||++..  .+..+++|.+.......     ....+..++..+..+    +|+|++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~  103 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFG--TVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL  103 (312)
T ss_dssp             -------CEEEEEEEEETTE--EEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred             hhhhhhceEEeeEEEcCCCE--EEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence            34445679999999999999  9999988  67889999987543111     122345577777777    89999999


Q ss_pred             eeEEecCCccEEEEec-cCCCC
Q 045247          100 IGCCLETPIPILVFEY-GEYRT  120 (121)
Q Consensus       100 ~~~~~~~~~~~lv~e~-~~~g~  120 (121)
                      ++.+......++++|+ +.+++
T Consensus       104 ~~~~~~~~~~~~v~e~~~~~~~  125 (312)
T 2iwi_A          104 LDWFETQEGFMLVLERPLPAQD  125 (312)
T ss_dssp             EEEC-----CEEEEECCSSEEE
T ss_pred             EEEEecCCeEEEEEEecCCCCC
Confidence            9999888899999998 66654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.74  E-value=1.8e-08  Score=67.86  Aligned_cols=80  Identities=14%  Similarity=0.062  Sum_probs=60.1

Q ss_pred             hcCCCcC-CeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec----CC
Q 045247           35 TNNYDER-EVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE----TP  107 (121)
Q Consensus        35 ~~~~~~~-~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~----~~  107 (121)
                      .++|... +.||.|.||  .||++..  .+..+++|.+....  .....   ....+..+.|+|++++++.+..    ..
T Consensus        27 ~~~y~i~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~--~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~   99 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNG--KVLECFHRRTGQKCALKLLYDSP--KARQE---VDHHWQASGGPHIVCILDVYENMHHGKR   99 (336)
T ss_dssp             GGTEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEESSH--HHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             cceeEecceeeeeCCCe--EEEEEEECCCCCEEEEEEecCcH--HHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence            3467774 469999999  9999998  68899999987541  22222   2233566789999999998865    34


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus       100 ~~~lv~e~~~gg~L  113 (336)
T 3fhr_A          100 CLLIIMECMEGGEL  113 (336)
T ss_dssp             EEEEEEECCTTEEH
T ss_pred             eEEEEEeccCCCCH
Confidence            58999999998764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.73  E-value=2.1e-08  Score=69.11  Aligned_cols=76  Identities=13%  Similarity=0.251  Sum_probs=56.7

Q ss_pred             CCc-CCeeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CCccE
Q 045247           38 YDE-REVIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TPIPI  110 (121)
Q Consensus        38 ~~~-~~~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~~~~  110 (121)
                      |.. .+.||+|.||  .||++..    .+..+++|.+....   ....+.+|+.++..++|+|++++++++..  ....+
T Consensus        22 y~~~g~~lG~G~~g--~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   96 (405)
T 3rgf_A           22 FEYEGCKVGRGTYG--HVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW   96 (405)
T ss_dssp             EECSSCCCC-------EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred             hhhcCcEeeecCCe--EEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence            443 4579999999  9999986    36679999987543   22457789999999999999999999954  66789


Q ss_pred             EEEeccCC
Q 045247          111 LVFEYGEY  118 (121)
Q Consensus       111 lv~e~~~~  118 (121)
                      +||||+++
T Consensus        97 lv~e~~~~  104 (405)
T 3rgf_A           97 LLFDYAEH  104 (405)
T ss_dssp             EEEECCSE
T ss_pred             EEEeCCCC
Confidence            99999875

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.72  E-value=3.3e-08  Score=68.85  Aligned_cols=74  Identities=9%  Similarity=0.047  Sum_probs=60.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEec
Q 045247           38 YDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEY  115 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~  115 (121)
                      |...+.||+|.||  .||.... .+..+++|.+...    ....+..|+..+..+ +|||++++++.+......++||||
T Consensus        17 ~~~~~~LG~G~~g--~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~   90 (434)
T 2rio_A           17 VVSEKILGYGSSG--TVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL   90 (434)
T ss_dssp             EEEEEEEEECSTT--CEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeccCeEeeCCCe--EEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence            4456789999999  9976555 8889999988653    234567788888876 799999999999988999999999


Q ss_pred             cC
Q 045247          116 GE  117 (121)
Q Consensus       116 ~~  117 (121)
                      ++
T Consensus        91 ~~   92 (434)
T 2rio_A           91 CN   92 (434)
T ss_dssp             CS
T ss_pred             CC
Confidence            85

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.70  E-value=1.5e-08  Score=70.30  Aligned_cols=75  Identities=19%  Similarity=0.296  Sum_probs=60.0

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC------Cc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET------PI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~------~~  108 (121)
                      .|...+.||+|.||  .||++..  .+..+++|.+....     ....+|+.+++.++|+|++++++++...      ..
T Consensus        55 ~y~~~~~lG~G~fg--~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           55 SYTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred             eEEeeeEEeeCCCE--EEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence            47788999999999  9999998  68899999886542     1123578899999999999999888532      23


Q ss_pred             cEEEEeccCC
Q 045247          109 PILVFEYGEY  118 (121)
Q Consensus       109 ~~lv~e~~~~  118 (121)
                      .++||||+++
T Consensus       128 ~~lv~e~~~~  137 (420)
T 1j1b_A          128 LNLVLDYVPE  137 (420)
T ss_dssp             EEEEEECCCE
T ss_pred             EEeehhcccc
Confidence            6789999875

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.69  E-value=4e-08  Score=65.14  Aligned_cols=82  Identities=15%  Similarity=0.260  Sum_probs=60.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC----hhHHHHHHHHHHHHHh---cCCCCcceeeeEEec
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP----DSVYKYSINNIVYAAQ---MDHKHILKLIGCCLE  105 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~----~~~~~~~~~~~~~l~~---l~h~~~~~~~~~~~~  105 (121)
                      .+.|...+.||+|.||  .||++..  .+..+++|.+.....    ........+++..+..   +.|+|++++++++..
T Consensus         8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYG--TVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             --CCEEEEEECCSSSC--CEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             ccceEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            4679999999999999  9999997  788899998864320    0112334455555544   459999999999876


Q ss_pred             CC-----ccEEEEeccCC
Q 045247          106 TP-----IPILVFEYGEY  118 (121)
Q Consensus       106 ~~-----~~~lv~e~~~~  118 (121)
                      ..     ..+++|||+.+
T Consensus        86 ~~~~~~~~~~lv~e~~~~  103 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVDQ  103 (308)
T ss_dssp             CCSSSEEEEEEEEECCCC
T ss_pred             cCCCCceeEEEEehhhhc
Confidence            54     47899999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.69  E-value=4.6e-09  Score=73.24  Aligned_cols=78  Identities=6%  Similarity=0.070  Sum_probs=62.3

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ...|...+.||+|.||  .|+.... .+..+++|.+.... .   ....+|+..+..+ +|+|++++++.+......++|
T Consensus        23 ~~~y~~~~~LG~G~~G--~V~~~~~~~~~~vAvK~~~~~~-~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           23 KISFCPKDVLGHGAEG--TIVYRGMFDNRDVAVKRILPEC-F---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             TEEEEEEEEEEECGGG--CEEEEEESSSSEEEEEEECTTT-E---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cEEEecCCeeecCcCE--EEEEEEEeCCeEEEEEEECHHH-H---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence            3458888999999999  8654444 88899999986543 1   1245678888888 699999999999999999999


Q ss_pred             EeccCC
Q 045247          113 FEYGEY  118 (121)
Q Consensus       113 ~e~~~~  118 (121)
                      |||+++
T Consensus        97 ~E~~~g  102 (432)
T 3p23_A           97 IELCAA  102 (432)
T ss_dssp             EECCSE
T ss_pred             EECCCC
Confidence            999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.67  E-value=1.5e-08  Score=67.47  Aligned_cols=83  Identities=17%  Similarity=0.288  Sum_probs=60.6

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe---CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHh---cCCCCcceeeeEEe--
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW---QERLISVLKFDESLPD-SVYKYSINNIVYAAQ---MDHKHILKLIGCCL--  104 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~---~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~---l~h~~~~~~~~~~~--  104 (121)
                      ..++|...+.||+|.||  .||++..   .+..+++|.+...... .....+.+++..+..   +.|+|++++++++.  
T Consensus         9 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~   86 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   86 (326)
T ss_dssp             GGGTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred             chhceeeeeeecccccE--EEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence            34678999999999999  9999987   4678999988643211 111233445554444   48999999999886  


Q ss_pred             ---cCCccEEEEeccCC
Q 045247          105 ---ETPIPILVFEYGEY  118 (121)
Q Consensus       105 ---~~~~~~lv~e~~~~  118 (121)
                         .....++||||+.+
T Consensus        87 ~~~~~~~~~lv~e~~~~  103 (326)
T 1blx_A           87 RTDRETKLTLVFEHVDQ  103 (326)
T ss_dssp             ECSSEEEEEEEEECCSC
T ss_pred             ccCCCceEEEEEecCCC
Confidence               45678999999874

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.65  E-value=4.7e-08  Score=69.99  Aligned_cols=81  Identities=7%  Similarity=-0.075  Sum_probs=54.9

Q ss_pred             CcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCC-hh------HHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           39 DEREVIKQCDFYITKLYKGFWQERLISVLKFDESLP-DS------VYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        39 ~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~-~~------~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ...+.||+|.|+  .||++...+..+++|....... ..      ....+.+|+..+..++|+|++++...+...+..++
T Consensus       339 ~~~~~LG~G~fg--~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEA--DIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCE--EEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCE--EEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            446789999999  9999976666777776543221 11      13457899999999999999966666667778899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       417 VmE~~~ggsL  426 (540)
T 3en9_A          417 MMSYINGKLA  426 (540)
T ss_dssp             EEECCCSEEH
T ss_pred             EEECCCCCCH
Confidence            9999998764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.65  E-value=4.4e-08  Score=64.33  Aligned_cols=81  Identities=16%  Similarity=0.034  Sum_probs=63.8

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEE-ecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCC-LETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~-~~~~~~~l  111 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+....   ....+..|+..+..+.|++.+..+..+ ......++
T Consensus         8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l   82 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM   82 (296)
T ss_dssp             TTTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred             ccEEEEEEEEccCCCe--EEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence            4578899999999999  9999997  78899999887543   123477888899999988766655554 55677899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+ +++|
T Consensus        83 v~e~~-~~~L   91 (296)
T 3uzp_A           83 VMELL-GPSL   91 (296)
T ss_dssp             EEECC-CCBH
T ss_pred             EEEec-CCCH
Confidence            99999 6653

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.65  E-value=4.7e-08  Score=66.83  Aligned_cols=81  Identities=16%  Similarity=0.225  Sum_probs=65.1

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CC-----CcceeeeEEec
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HK-----HILKLIGCCLE  105 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~-----~~~~~~~~~~~  105 (121)
                      ..++|...+.||+|.||  .||++..  .+..+++|.+...  ......+..++..+..+. |+     +++.+.+.+..
T Consensus        52 ~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  127 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFG--QVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF  127 (382)
T ss_dssp             ETTTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred             eeeeEEEEEEEeecCCE--EEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence            45678889999999999  9999998  6888999999754  233455666777777665 44     48999999998


Q ss_pred             CCccEEEEeccCC
Q 045247          106 TPIPILVFEYGEY  118 (121)
Q Consensus       106 ~~~~~lv~e~~~~  118 (121)
                      ....++||||+++
T Consensus       128 ~~~~~lv~e~~~~  140 (382)
T 2vx3_A          128 RNHLCLVFEMLSY  140 (382)
T ss_dssp             TTEEEEEEECCCC
T ss_pred             CCceEEEEecCCC
Confidence            9999999999964

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.65  E-value=5.3e-08  Score=63.89  Aligned_cols=82  Identities=16%  Similarity=0.034  Sum_probs=60.4

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEE-ecCCccE
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCC-LETPIPI  110 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~-~~~~~~~  110 (121)
                      ..+.|...+.||+|.||  .||++..  .+..+++|......   ....+..+...+..+.|++.+..+..+ ......+
T Consensus         7 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             ----CEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred             cCCceEEeeeecCCCCe--EEEEEEEcCCCceEEEEeecccc---cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence            34679999999999999  9999997  78889999865442   223467788888889888766665555 5677889


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      ++|||+ +++|
T Consensus        82 lv~e~~-~~~L   91 (296)
T 4hgt_A           82 MVMELL-GPSL   91 (296)
T ss_dssp             EEEECC-CCBH
T ss_pred             EEEEcc-CCCH
Confidence            999999 6653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.64  E-value=3.4e-08  Score=66.95  Aligned_cols=80  Identities=14%  Similarity=0.108  Sum_probs=64.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-----------CCCcceeeeE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-----------HKHILKLIGC  102 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-----------h~~~~~~~~~  102 (121)
                      ++|...+.||+|.||  .||++..  .+..+++|.+...  ......+..|+..+..+.           |+|++++++.
T Consensus        19 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~   94 (373)
T 1q8y_A           19 ARYILVRKLGWGHFS--TVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   94 (373)
T ss_dssp             TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             CeEEEEEeeeecCCe--EEEEEEecCCCcEEEEEEecCC--ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence            578899999999999  9999998  7889999998754  234556677777777665           7899999998


Q ss_pred             EecCC----ccEEEEeccCCCC
Q 045247          103 CLETP----IPILVFEYGEYRT  120 (121)
Q Consensus       103 ~~~~~----~~~lv~e~~~~g~  120 (121)
                      +....    ..+++||++ +++
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~~~  115 (373)
T 1q8y_A           95 FNHKGPNGVHVVMVFEVL-GEN  115 (373)
T ss_dssp             EEEEETTEEEEEEEECCC-CEE
T ss_pred             hhccCCCCceEEEEEecC-CCC
Confidence            86543    688999988 443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.63  E-value=3.5e-08  Score=67.92  Aligned_cols=77  Identities=14%  Similarity=0.194  Sum_probs=59.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC------c
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP------I  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~------~  108 (121)
                      ..|...+.||+|.||  .||++.. ....+++|.+....  .   ...+|+.+++.++|+|++++++++....      .
T Consensus        40 ~~Y~~~~~lG~G~~g--~V~~a~~~~~~~~aikk~~~~~--~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFG--VVFQAKLVESDEVAIKKVLQDK--R---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEEETTE--EEEEEEETTTEEEEEEEEECCT--T---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             ceEEEeEEEeeCCCe--EEEEEEECCCCeEEEEEEecCc--c---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            358888999999999  9999998 55567877775432  1   1125788899999999999999985433      2


Q ss_pred             cEEEEeccCCC
Q 045247          109 PILVFEYGEYR  119 (121)
Q Consensus       109 ~~lv~e~~~~g  119 (121)
                      .++||||++++
T Consensus       113 ~~lv~e~~~~~  123 (394)
T 4e7w_A          113 LNLVLEYVPET  123 (394)
T ss_dssp             EEEEEECCSEE
T ss_pred             EEEEeeccCcc
Confidence            78999999754

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.63  E-value=1.9e-07  Score=61.75  Aligned_cols=79  Identities=6%  Similarity=-0.056  Sum_probs=59.2

Q ss_pred             CCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCCh-----------------hHHHHHHHHHHHHHhcCCCCcce
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPD-----------------SVYKYSINNIVYAAQMDHKHILK   98 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~-----------------~~~~~~~~~~~~l~~l~h~~~~~   98 (121)
                      -|...+.||+|.+|  .||.+.+ .+..+++|.++.....                 .....+.+|+..+..++  | ++
T Consensus        91 ~~~~~~~iG~G~~g--~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~  165 (282)
T 1zar_A           91 VDAIGKLMGEGKES--AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA  165 (282)
T ss_dssp             CSEEEEEEEECSSE--EEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred             EEEecCEeccCCCc--eEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence            34455899999999  9999999 7889999998653211                 12456788999999998  4 56


Q ss_pred             eeeEEecCCccEEEEeccCCCCC
Q 045247           99 LIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        99 ~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +.+++. .+..++||||+++|+|
T Consensus       166 v~~~~~-~~~~~lvmE~~~g~~L  187 (282)
T 1zar_A          166 VPKVYA-WEGNAVLMELIDAKEL  187 (282)
T ss_dssp             SCCEEE-EETTEEEEECCCCEEG
T ss_pred             cCeEEe-ccceEEEEEecCCCcH
Confidence            665543 3667999999998875

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.61  E-value=1e-07  Score=63.99  Aligned_cols=80  Identities=9%  Similarity=0.001  Sum_probs=65.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CC-eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCC------cceeeeEEec
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QE-RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKH------ILKLIGCCLE  105 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~-~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~------~~~~~~~~~~  105 (121)
                      .++|...+.||+|.||  .||++..  .+ ..+++|.++..  ......+..|+..+..+.|++      ++.+.+.+..
T Consensus        18 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFG--KVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             TTTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred             cccEEEEEEeeccCCe--EEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence            3578899999999999  9999988  44 68999998754  344566777888888877665      8888888888


Q ss_pred             CCccEEEEeccCC
Q 045247          106 TPIPILVFEYGEY  118 (121)
Q Consensus       106 ~~~~~lv~e~~~~  118 (121)
                      ....++||||+.+
T Consensus        94 ~~~~~lv~e~~~~  106 (355)
T 2eu9_A           94 HGHMCIAFELLGK  106 (355)
T ss_dssp             TTEEEEEEECCCC
T ss_pred             CCeEEEEEeccCC
Confidence            8999999999954

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.58  E-value=1.2e-07  Score=64.58  Aligned_cols=82  Identities=7%  Similarity=-0.089  Sum_probs=51.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHH---HHHHhcCCCCcceee-------e
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNI---VYAAQMDHKHILKLI-------G  101 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~---~~l~~l~h~~~~~~~-------~  101 (121)
                      ..|...+.||+|.||  .||++.+  .+..+++|.+.....  ......+..|+   ..+.. .|||+++++       +
T Consensus        62 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d  138 (371)
T 3q60_A           62 RKLKLVEPLRVGDRS--VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSD  138 (371)
T ss_dssp             EEEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCE
T ss_pred             eeeeeeeeccCCCCE--EEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeeh
Confidence            347788999999999  9999998  788999999987542  12245566664   44455 699977754       3


Q ss_pred             EEecC-----------------CccEEEEeccCCCCC
Q 045247          102 CCLET-----------------PIPILVFEYGEYRTL  121 (121)
Q Consensus       102 ~~~~~-----------------~~~~lv~e~~~~g~L  121 (121)
                      .+...                 ...++||||++ |+|
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L  174 (371)
T 3q60_A          139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDL  174 (371)
T ss_dssp             EEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEH
T ss_pred             heecCCCCCeeeccCCcccceeeeEEEEecCCC-CCH
Confidence            33322                 23799999998 553

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.57  E-value=1.9e-08  Score=68.02  Aligned_cols=77  Identities=12%  Similarity=0.061  Sum_probs=60.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-C---------CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcce-------
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-Q---------ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILK-------   98 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~-------   98 (121)
                      ++|...+.||+|.||  .||++.. .         +..+++|.+...      ..+.+|+..+..+.|+|+++       
T Consensus        42 ~~y~~~~~lg~G~~g--~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           42 RQWKLKSFQTRDNQG--ILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             CEEEEEEEEEEETTE--EEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred             CeEEEEEEecCCCCe--EEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence            578889999999999  9999988 3         567999988754      24667888888888988877       


Q ss_pred             --------eeeEEec-CCccEEEEeccCCCCC
Q 045247           99 --------LIGCCLE-TPIPILVFEYGEYRTL  121 (121)
Q Consensus        99 --------~~~~~~~-~~~~~lv~e~~~~g~L  121 (121)
                              +++.+.. ....++||||+ +++|
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L  144 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSL  144 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECC-CEEH
T ss_pred             CCccCccchhhccccCCcEEEEEecCC-CcCH
Confidence                    5566654 67889999999 7654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.56  E-value=1.7e-08  Score=67.40  Aligned_cols=88  Identities=14%  Similarity=0.184  Sum_probs=67.1

Q ss_pred             HHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh-----HHHHHHHHHHHHHhcC--CCCccee
Q 045247           29 KELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS-----VYKYSINNIVYAAQMD--HKHILKL   99 (121)
Q Consensus        29 ~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~-----~~~~~~~~~~~l~~l~--h~~~~~~   99 (121)
                      .......++|...+.||+|.||  .||++..  .+..+++|.+.......     ....+..|+..+..+.  |+|++++
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~  113 (320)
T 3a99_A           36 KEKEPLESQYQVGPLLGSGGFG--SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL  113 (320)
T ss_dssp             ----CCTTTEEEEEECSSSSSC--EEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             cccCCccCceEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence            3444456779999999999999  9999988  78899999986542110     1234556777788875  5999999


Q ss_pred             eeEEecCCccEEEEeccCC
Q 045247          100 IGCCLETPIPILVFEYGEY  118 (121)
Q Consensus       100 ~~~~~~~~~~~lv~e~~~~  118 (121)
                      ++.+......++++|++.+
T Consensus       114 ~~~~~~~~~~~lv~e~~~~  132 (320)
T 3a99_A          114 LDWFERPDSFVLILERPEP  132 (320)
T ss_dssp             EEEEECSSEEEEEEECCSS
T ss_pred             EEEEecCCcEEEEEEcCCC
Confidence            9999999999999999875

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.55  E-value=6.4e-08  Score=65.28  Aligned_cols=83  Identities=19%  Similarity=0.075  Sum_probs=58.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCChhH----------HHHHHHHHHHHHhcCCCCcceee
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLPDSV----------YKYSINNIVYAAQMDHKHILKLI  100 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~~~~----------~~~~~~~~~~l~~l~h~~~~~~~  100 (121)
                      ++|...+.||+|.||  .||++..     .+..+++|..........          ...+..++..+..+.|+|+++++
T Consensus        37 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~  114 (345)
T 2v62_A           37 NQWVLGKKIGSGGFG--LIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY  114 (345)
T ss_dssp             CEEEEEEEC--------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred             ceEEEEeeEeecCCe--EEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence            468889999999999  9999998     245688888875431110          12355677788889999999999


Q ss_pred             eEEec----CCccEEEEeccCCCCC
Q 045247          101 GCCLE----TPIPILVFEYGEYRTL  121 (121)
Q Consensus       101 ~~~~~----~~~~~lv~e~~~~g~L  121 (121)
                      +.+..    ....++||||+ +++|
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-~~~L  138 (345)
T 2v62_A          115 GSGLTEFKGRSYRFMVMERL-GIDL  138 (345)
T ss_dssp             EEEEEESSSCEEEEEEEECE-EEEH
T ss_pred             cccccccCCCcEEEEEEecc-CCCH
Confidence            99877    67899999998 6653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.55  E-value=5.2e-08  Score=66.18  Aligned_cols=84  Identities=13%  Similarity=0.082  Sum_probs=61.2

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe-C------CeEEEEEEecCCCChhHH-----------HHHHHHHHHHHhcCCCC
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW-Q------ERLISVLKFDESLPDSVY-----------KYSINNIVYAAQMDHKH   95 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~-~------~~~~~~k~~~~~~~~~~~-----------~~~~~~~~~l~~l~h~~   95 (121)
                      ..++|...+.||+|.||  .||++.+ .      +..+++|.+.... ....           .....+...+..+.|+|
T Consensus        33 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~  109 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFG--CIYLADMNSSESVGSDAPCVVKVEPSDN-GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLG  109 (364)
T ss_dssp             TCCEEEEEEECCCC-CC--EEEEEEECCSSCCCTTCSEEEEEEETTC-HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCC
T ss_pred             CCCeEEEEEEEecCCCe--EEEEeeecCccccccccceEEEEeeccc-hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCC
Confidence            34578999999999999  9999987 3      3678999887653 1110           12344555677888999


Q ss_pred             cceeeeEEecC----CccEEEEeccCCCCC
Q 045247           96 ILKLIGCCLET----PIPILVFEYGEYRTL  121 (121)
Q Consensus        96 ~~~~~~~~~~~----~~~~lv~e~~~~g~L  121 (121)
                      ++++++++...    ...++||||+ +++|
T Consensus       110 iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L  138 (364)
T 3op5_A          110 VPKYWGSGLHDKNGKSYRFMIMDRF-GSDL  138 (364)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEECE-EEEH
T ss_pred             CCeEEeeeeeccCCcceEEEEEeCC-CCCH
Confidence            99999998764    4589999999 6553

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.53  E-value=2e-07  Score=65.93  Aligned_cols=81  Identities=12%  Similarity=0.036  Sum_probs=62.7

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCC-CcceeeeEEecCCccEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHK-HILKLIGCCLETPIPIL  111 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~-~~~~~~~~~~~~~~~~l  111 (121)
                      .++|...+.||+|.||  .||++..  .+..+++|.+....   ....+..|...+..+.|. ++..+..+.......++
T Consensus         6 ~~~y~i~~~LG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l   80 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFG--EIYLGTNIQTNEEVAIKLENVKT---KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL   80 (483)
T ss_dssp             TTTEECCCCCEECSSC--EEEEEEETTTCCEEEEEEEETTC---SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred             CCcEEEEEEEeeCCCE--EEEEEEECCCCcEEEEEEecccc---ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence            3578999999999999  9999998  68889999876543   123467788888888864 55555566667788899


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+ +++|
T Consensus        81 vme~~-g~sL   89 (483)
T 3sv0_A           81 VMDLL-GPSL   89 (483)
T ss_dssp             EEECC-CCBH
T ss_pred             EEECC-CCCH
Confidence            99999 6553

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.15  E-value=2.2e-06  Score=61.76  Aligned_cols=62  Identities=15%  Similarity=-0.079  Sum_probs=49.3

Q ss_pred             CCeEEEEEEecCCC-----Ch----hHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           60 QERLISVLKFDESL-----PD----SVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        60 ~~~~~~~k~~~~~~-----~~----~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      .|..+++|.+....     ..    .....+.+|+..|.++ .|+|++++++++.....+||||||++|++|
T Consensus       258 fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L  329 (569)
T 4azs_A          258 FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLL  329 (569)
T ss_dssp             ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEH
T ss_pred             ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcH
Confidence            34557888876542     11    1135689999999999 499999999999999999999999999875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.75  E-value=9.9e-05  Score=47.90  Aligned_cols=74  Identities=8%  Similarity=0.059  Sum_probs=52.3

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeE--EEEEEecCCCCh-----------------------hHHHHHHHHHHHHHh
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERL--ISVLKFDESLPD-----------------------SVYKYSINNIVYAAQ   90 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~--~~~k~~~~~~~~-----------------------~~~~~~~~~~~~l~~   90 (121)
                      |...+.||+|.||  .||++..  .+..  +++|.++.....                       .....+..|...+..
T Consensus        49 ~~i~~~ig~G~~g--~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           49 TAMGGVISTGKEA--NVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             EEEEEEEEECSSE--EEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceE--EEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            4567889999999  9999988  7888  999987543200                       012357788888988


Q ss_pred             cCCCCc--ceeeeEEecCCccEEEEeccC
Q 045247           91 MDHKHI--LKLIGCCLETPIPILVFEYGE  117 (121)
Q Consensus        91 l~h~~~--~~~~~~~~~~~~~~lv~e~~~  117 (121)
                      +.|+++  ..++..    ...++||||+.
T Consensus       127 l~~~~i~~p~~~~~----~~~~lVmE~~g  151 (258)
T 1zth_A          127 AKEAGVSVPQPYTY----MKNVLLMEFIG  151 (258)
T ss_dssp             HHHTTCCCCCEEEE----ETTEEEEECCE
T ss_pred             HHhCCCCCCeEEEc----CCCEEEEEecC
Confidence            887754  233322    46789999994

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.73  E-value=8.6e-06  Score=56.33  Aligned_cols=32  Identities=6%  Similarity=-0.195  Sum_probs=28.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe-CCeEEEEEEecC
Q 045247           38 YDEREVIKQCDFYITKLYKGFW-QERLISVLKFDE   71 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~   71 (121)
                      |.....||.|.++  .||.+.. .|..+++|.++.
T Consensus        97 Y~I~~~IG~Gk~a--~VY~a~d~~G~~vAvKi~r~  129 (397)
T 4gyi_A           97 YSVGSRIGVGKES--DIMIVADEKGKQKVLKIHRL  129 (397)
T ss_dssp             SEEEEEEEECSSE--EEEEEECTTCCEEEEEEECT
T ss_pred             EEecCEeeeCCce--EEEEEECCCCCEEEEEEEec
Confidence            7778999999999  9999998 888999998753

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.33  E-value=0.00048  Score=44.41  Aligned_cols=85  Identities=8%  Similarity=-0.070  Sum_probs=60.2

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~l  111 (121)
                      ....+|.....++.+..+  .||+....+..+.+|....... .....+..|...+..+. +..+.++++........++
T Consensus        11 ~~l~~~~~~~~~~g~s~~--~v~~~~~~~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPA--KVYKLVGENENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHTTSEEEECCSCCSSS--EEEEEECSSCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHhccceeEeeccCCCCC--eEEEEECCCCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            344567666667777778  8998876567788998764210 11234667777777765 5667788888888888999


Q ss_pred             EEeccCCCC
Q 045247          112 VFEYGEYRT  120 (121)
Q Consensus       112 v~e~~~~g~  120 (121)
                      ||||++|.+
T Consensus        88 v~e~i~G~~   96 (263)
T 3tm0_A           88 LMSEADGVL   96 (263)
T ss_dssp             EEECCSSEE
T ss_pred             EEEecCCee
Confidence            999999854

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=96.35  E-value=0.0036  Score=43.21  Aligned_cols=55  Identities=11%  Similarity=-0.059  Sum_probs=41.9

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh--HHHHHHHHHHHHHhcCC
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS--VYKYSINNIVYAAQMDH   93 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~l~h   93 (121)
                      .|...+.||+|.||  .||++.+  .+..+++|.+.......  ....+.+|+..+..+.|
T Consensus        79 ~~~~~~~LG~G~fG--~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           79 TLVRGTVLGQEDPY--AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             eEEEecccccCCCE--EEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            36667889999999  9999998  68899999987443111  24567788888888876

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.27  E-value=0.018  Score=38.75  Aligned_cols=80  Identities=11%  Similarity=0.001  Sum_probs=50.6

Q ss_pred             cCCeeecCCCccceEEEEEeCCeEEEEEEec--CCCChhHHHHHHHHHHHHHhcCC--CCcceeeeEEecC---CccEEE
Q 045247           40 EREVIKQCDFYITKLYKGFWQERLISVLKFD--ESLPDSVYKYSINNIVYAAQMDH--KHILKLIGCCLET---PIPILV  112 (121)
Q Consensus        40 ~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~--~~~~~~~~~~~~~~~~~l~~l~h--~~~~~~~~~~~~~---~~~~lv  112 (121)
                      ..+.++.|..+  .+|.....+..+++|...  ..........+..|...+..+..  ..+.+++..+...   ...|+|
T Consensus        42 ~~~~l~~G~sn--~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           42 SVEQFKGGQSN--PTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEEECCC-CCS--CEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             eEEEcCCcccc--eEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            35567888888  899877745567777665  32111223456778888877763  4567777777654   348999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++..+
T Consensus       120 me~v~G~~l  128 (359)
T 3dxp_A          120 MEFVSGRVL  128 (359)
T ss_dssp             EECCCCBCC
T ss_pred             EEecCCeec
Confidence            999998653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.17  E-value=0.0059  Score=38.85  Aligned_cols=71  Identities=7%  Similarity=-0.061  Sum_probs=47.7

Q ss_pred             ecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCC--cceeeeEEecCCccEEEEeccCCCCC
Q 045247           45 KQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKH--ILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        45 g~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~--~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                      +.|..+  .||+... .+..+++|......    ...+..|...+..+.+.+  +.+++.........+++|||++|.+|
T Consensus        29 ~gg~~~--~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l  102 (264)
T 1nd4_A           29 IGCSDA--AVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL  102 (264)
T ss_dssp             CTTSSC--EEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             cCCCCc--eEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence            356667  8998876 56678888865431    123456666666665333  45577777766778999999998653

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=93.25  E-value=1.2  Score=29.71  Aligned_cols=75  Identities=9%  Similarity=-0.036  Sum_probs=52.1

Q ss_pred             cCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC---CCCcceeeeEEecCCccEEEEecc
Q 045247           40 EREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMD---HKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        40 ~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~---h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      ..+.++.|...  .+|+-...+..+.+|.....    ....+..|...+..+.   ...+.+++.........++||||+
T Consensus        40 ~~~~l~gG~~n--~~y~v~~~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           40 HKEKLYSGEMN--EIWLINDEVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEEECCSSSS--EEEEEESSSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eeEEeCCccce--eeeEEEECCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence            34567888888  88887665566777766532    2345666666666554   345667777776667899999999


Q ss_pred             CCCC
Q 045247          117 EYRT  120 (121)
Q Consensus       117 ~~g~  120 (121)
                      ++..
T Consensus       114 ~G~~  117 (312)
T 3jr1_A          114 NKSK  117 (312)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            9864

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=92.87  E-value=0.49  Score=30.74  Aligned_cols=76  Identities=9%  Similarity=0.045  Sum_probs=48.6

Q ss_pred             CCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCC---CcceeeeEEecCCccEEEE
Q 045247           38 YDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHK---HILKLIGCCLETPIPILVF  113 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~---~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.....+|.|..+  .+|+... +|+.+.+|...... .....-+..|...|..+...   .+.+++..    ...+++|
T Consensus        17 v~~v~~~g~G~~~--~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~   89 (288)
T 3f7w_A           17 VAAVAERGHSHRW--HLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAM   89 (288)
T ss_dssp             EEEEEEEEEETTE--EEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEE
T ss_pred             eEEEEecCCCCCe--EEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEE
Confidence            4445678889999  9999998 78889998765432 11123356677777666432   23333332    2458999


Q ss_pred             eccCCCC
Q 045247          114 EYGEYRT  120 (121)
Q Consensus       114 e~~~~g~  120 (121)
                      ||++.+.
T Consensus        90 e~l~~~~   96 (288)
T 3f7w_A           90 EWVDERP   96 (288)
T ss_dssp             ECCCCCC
T ss_pred             EeecccC
Confidence            9987653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=90.32  E-value=2.3  Score=26.99  Aligned_cols=63  Identities=8%  Similarity=-0.052  Sum_probs=42.9

Q ss_pred             eEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEEeccCCC
Q 045247           53 KLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVFEYGEYR  119 (121)
Q Consensus        53 ~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~e~~~~g  119 (121)
                      .+|+-..  .+..+.+|....    .....+..|...+..+. +-.+.+++..+......++|||++++.
T Consensus        40 ~v~rl~~~~~~~~~~lk~~~~----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~  105 (272)
T 4gkh_A           40 TIYRLYGKPNAPELFLKHGKG----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK  105 (272)
T ss_dssp             EEEEEECCTTCCCEEEEEEET----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred             eEEEEEecCCCeEEEEEECCC----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence            4776555  345577776543    23455677777777665 334667777777788899999999874

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=82.75  E-value=7  Score=25.57  Aligned_cols=71  Identities=6%  Similarity=-0.204  Sum_probs=44.6

Q ss_pred             CeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCC---CcceeeeEEe-cCCccEEEEeccC
Q 045247           42 EVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHK---HILKLIGCCL-ETPIPILVFEYGE  117 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~---~~~~~~~~~~-~~~~~~lv~e~~~  117 (121)
                      +.++.|...  .+|..   +..+.+|....   ......+..|...+..+.+.   .+..++.... .....+++|++++
T Consensus        25 ~~l~~G~~n--~v~~v---g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           25 ESLGEGFRN--YAILV---NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEECSSE--EEEEE---TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eecCCCcce--eEEEE---CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence            456677777  67655   34456665322   23356778888888887643   2344444443 3456889999998


Q ss_pred             CCC
Q 045247          118 YRT  120 (121)
Q Consensus       118 ~g~  120 (121)
                      |.+
T Consensus        97 G~~   99 (306)
T 3tdw_A           97 GQI   99 (306)
T ss_dssp             SEE
T ss_pred             CeE
Confidence            754

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=81.15  E-value=4.4  Score=27.43  Aligned_cols=74  Identities=8%  Similarity=0.038  Sum_probs=42.6

Q ss_pred             CCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--h----hHHHHHHHHHHHHHhcCC--CC-cceeeeEEecCCcc
Q 045247           41 REVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--D----SVYKYSINNIVYAAQMDH--KH-ILKLIGCCLETPIP  109 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~----~~~~~~~~~~~~l~~l~h--~~-~~~~~~~~~~~~~~  109 (121)
                      .+.+|.|..+  .||+...  .+..+++|.......  .    ....+...|...+..+..  +. +.+++..  ..+..
T Consensus        35 ~~~lg~G~~n--~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~  110 (397)
T 2olc_A           35 CQEIGDGNLN--YVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMA  110 (397)
T ss_dssp             EEECCSSSSE--EEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTT
T ss_pred             EEECCCCceE--EEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCcc
Confidence            4567889999  9999865  456788887543210  0    012234556666665432  22 3344332  34567


Q ss_pred             EEEEeccCC
Q 045247          110 ILVFEYGEY  118 (121)
Q Consensus       110 ~lv~e~~~~  118 (121)
                      ++|||++++
T Consensus       111 ~lvmE~l~g  119 (397)
T 2olc_A          111 VTVMEDLSH  119 (397)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEEeCCC
Confidence            899999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	121
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-04
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-04
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-04
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-04
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	0.001
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.002
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	0.002
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	0.003

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 1e-06
 Identities = 7/93 (7%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 31  LEIATNNYDEREVIKQCDFYITKLYKGFWQE--RLISVLKFDESLPDSVYKYSINNIVYA 88
           +E+  +++++   +   +     ++K   +    +++       +  ++    I  +   
Sbjct: 1   MELKDDDFEKISELGAGNG--GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
            + +  +I+   G         +  E+ +  +L
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 91

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (92), Expect = 2e-05
 Identities = 14/110 (12%), Positives = 39/110 (35%), Gaps = 16/110 (14%)

Query: 26  FSAKELEIATNNYDEREVIKQCDFYITKL---------YKGFW-----QERLISVLKFDE 71
           F+ ++   A   + +   I      I ++           G       +E  +++     
Sbjct: 7   FTFEDPNEAVREFAKE--IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS 64

Query: 72  SLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
              +   +  ++      Q DH +++ L G   ++   +++ E+ E  +L
Sbjct: 65  GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 114

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 14/91 (15%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 32  EIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQM 91
            +        + I + +F    +  G ++   ++V        D+  +  +       Q+
Sbjct: 3   ALNMKELKLLQTIGKGEF--GDVMLGDYRGNKVAVKCIKN---DATAQAFLAEASVMTQL 57

Query: 92  DHKHILKLIGCCLETPIPI-LVFEYGEYRTL 121
            H ++++L+G  +E    + +V EY    +L
Sbjct: 58  RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 88

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 4/95 (4%)

Query: 30  ELEIATNNYDEREVIKQCDF---YITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIV 86
           + EI     +    I +  F   +             +++        DSV +  +   +
Sbjct: 1   DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60

Query: 87  YAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
              Q DH HI+KLIG   E P+ I + E      L
Sbjct: 61  TMRQFDHPHIVKLIGVITENPVWI-IMELCTLGEL 94

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.9 bits (85), Expect = 2e-04
 Identities = 10/58 (17%), Positives = 22/58 (37%)

Query: 64  ISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
           I  + +     +  ++  I  + +  ++ H + ++  GC L      LV EY      
Sbjct: 45  IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSAS 102

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.6 bits (84), Expect = 3e-04
 Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 29  KELEIATNNYDEREVIKQCDFYITKLYKGFWQE--RLISVLKFDESLPDSVYKYSINNIV 86
           K+ E   + YD R+V+    F  +++     +   +L+++    +   +       N I 
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAF--SEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 59

Query: 87  YAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
              ++ H +I+ L           L+ +      L
Sbjct: 60  VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 94

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 30  ELEIATNNYDEREVIKQCDFYITKLYKGFWQERL-ISVLKFDESLPDSVYKYSINNIVYA 88
           + EI        + I    F    +YKG W   + + +L      P  +  +  N +   
Sbjct: 2   DWEIPDGQITVGQRIGSGSF--GTVYKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVL 58

Query: 89  AQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
            +  H +IL  +G     P   +V ++ E  +L
Sbjct: 59  RKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 90

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 4e-04
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 13/122 (10%)

Query: 11  ELIASSHGKY---NPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFW-------Q 60
           ++  SS  +Y   +        + E    N +  +V+    F   K+             
Sbjct: 9   QVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAF--GKVMNATAYGISKTGV 66

Query: 61  ERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYGEYR 119
              ++V    E    S  +  ++ +    Q+  H++I+ L+G C  +    L+FEY  Y 
Sbjct: 67  SIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 126

Query: 120 TL 121
            L
Sbjct: 127 DL 128

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 5e-04
 Identities = 17/98 (17%), Positives = 42/98 (42%), Gaps = 8/98 (8%)

Query: 29  KELEIATNNYDEREV-IKQCDFYITKLYKGFWQER----LISVLKFDESLPDSVYKYSIN 83
           K+L +  +N    ++ +   +F    + +G ++ R     +++    +    +  +  + 
Sbjct: 1   KKLFLKRDNLLIADIELGCGNF--GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 58

Query: 84  NIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
                 Q+D+ +I++LIG C +    +LV E      L
Sbjct: 59  EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL 95

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 7e-04
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 10/95 (10%)

Query: 30  ELEIATNNYDEREVIKQCDFYITKLYKGFWQERL---ISVLKFDESLPDSVYKYSINNIV 86
           E E+        E +    F   +++ G++       +  LK     PD+     +    
Sbjct: 7   EWEVPRETLKLVERLGAGQF--GEVWMGYYNGHTKVAVKSLKQGSMSPDAF----LAEAN 60

Query: 87  YAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
              Q+ H+ +++L     + PI  ++ EY E  +L
Sbjct: 61  LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 94

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 9/58 (15%), Positives = 20/58 (34%)

Query: 64  ISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
           I +L+    + ++   Y        +++DH   +KL     +         Y +   L
Sbjct: 38  IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL 95

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.002
 Identities = 16/114 (14%), Positives = 42/114 (36%), Gaps = 10/114 (8%)

Query: 16  SHGKYNPYRIFSAKELEIATNNYDEREVIKQCDFYITKLYKGFWQE-------RLISVLK 68
           ++   +P ++    + E   N     + +    F   K+ +              ++V  
Sbjct: 3   NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAF--GKVVEATAYGLIKSDAAMTVAVKM 60

Query: 69  FDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPILVFEYGEYRTL 121
              S   +  +  ++ +   + + +H +I+ L+G C      +++ EY  Y  L
Sbjct: 61  LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.1 bits (77), Expect = 0.002
 Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 9/100 (9%)

Query: 29  KELEIATNNYDEREVIKQCDFYITKLYKGFWQE-------RLISVLKFDESLPDSVYKYS 81
             LE   NN +    I +  F   ++++             +++V    E     +    
Sbjct: 6   LSLEYPRNNIEYVRDIGEGAF--GRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 82  INNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
                  A+ D+ +I+KL+G C       L+FEY  Y  L
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 103

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 82  INNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYRTL 121
           I       ++ H  +++L G CLE     LVFE+ E+  L
Sbjct: 48  IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 87

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	121
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.64
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.61
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.6
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.6
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.59
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.59
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.58
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.57
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.57
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.57
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.56
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.56
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.56
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.55
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.55
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.55
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.54
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.52
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.51
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.51
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.51
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.51
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.5
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.49
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.48
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.48
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.47
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.47
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.47
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.46
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.46
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.46
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.46
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.45
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.42
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.41
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.41
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.37
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.37
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.33
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.33
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.32
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.31
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.3
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.3
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.29
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.28
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.28
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.27
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.27
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.19
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.19
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.18
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.14
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.1
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.09
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.07
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.94
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.88
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.28
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.22
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	93.6
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	82.62

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=7e-17  Score=105.72  Aligned_cols=90  Identities=16%  Similarity=0.373  Sum_probs=77.9

Q ss_pred             HHHHHHHhcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec
Q 045247           28 AKELEIATNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE  105 (121)
Q Consensus        28 ~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~  105 (121)
                      ++.|+...++|...+.||+|.||  .||++.+  ++..+++|.++...  .....+.+|+.+++.++|||++++++++..
T Consensus         9 ~~~wei~~~~~~~~~~iG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~--~~~~~~~~E~~il~~l~HpnIv~~~~~~~~   84 (287)
T d1opja_           9 YDKWEMERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR   84 (287)
T ss_dssp             CCTTBCCGGGEEEEEETTTTTTS--SEEEEEEGGGTEEEEEEECCTTC--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CcccEecHHHeEEeeEEeeCCCe--EEEEEEECCCCeEEEEEEECCcc--chHHHHHHHHHHHHhCCCCCEecCCccEee
Confidence            34455556788889999999999  9999998  68899999987653  345678999999999999999999999999


Q ss_pred             CCccEEEEeccCCCCC
Q 045247          106 TPIPILVFEYGEYRTL  121 (121)
Q Consensus       106 ~~~~~lv~e~~~~g~L  121 (121)
                      .+..+++|||+++|+|
T Consensus        85 ~~~~~iv~E~~~~g~l  100 (287)
T d1opja_          85 EPPFYIITEFMTYGNL  100 (287)
T ss_dssp             SSSCEEEEECCTTCBH
T ss_pred             CCeeEEEeecccCcch
Confidence            9999999999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=1.3e-15  Score=100.10  Aligned_cols=83  Identities=14%  Similarity=0.267  Sum_probs=69.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CC---eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QE---RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~---~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      +|...+.||+|.||  .||++.+  .+   ..+++|.+...........+.+|+.+++.++|||++++++++......++
T Consensus        27 ~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i  104 (299)
T d1jpaa_          27 CVKIEQVIGAGEFG--EVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI  104 (299)
T ss_dssp             GEEEEEEEEECSSS--EEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hcEEeeEEeeCCCe--EEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45556899999999  9999987  33   35788888765544556789999999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus       105 v~Ey~~~g~L  114 (299)
T d1jpaa_         105 ITEFMENGSL  114 (299)
T ss_dssp             EEECCTTEEH
T ss_pred             EEEecCCCcc
Confidence            9999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.6e-15  Score=98.01  Aligned_cols=82  Identities=22%  Similarity=0.346  Sum_probs=72.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      ++|...+.||+|.||  .||++.+ ++..+++|.++...  .....+.+|+..+..++|||++++++++...+..++|||
T Consensus         5 ~~~~~~~~iG~G~fg--~Vy~~~~~~~~~vAvK~i~~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E   80 (263)
T d1sm2a_           5 SELTFVQEIGSGQFG--LVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   80 (263)
T ss_dssp             SCEEEEEEEECCSSC--CEEEEEETTTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HHcEEEEEEeeCCCe--EEEEEEECCCCEEEEEEECCCc--CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEE
Confidence            467778899999999  9999999 77889999997653  335678999999999999999999999999999999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus        81 ~~~~g~L   87 (263)
T d1sm2a_          81 FMEHGCL   87 (263)
T ss_dssp             CCTTCBH
T ss_pred             ecCCCcH
Confidence            9999875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=7.5e-16  Score=100.09  Aligned_cols=84  Identities=17%  Similarity=0.205  Sum_probs=70.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.++..........+.+|+.+++.++|||++++++++...+..++||
T Consensus         5 ~dy~~~~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm   82 (271)
T d1nvra_           5 EDWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   82 (271)
T ss_dssp             TEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence            468888999999999  9999998  688999999876542233456889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        83 Ey~~gg~L   90 (271)
T d1nvra_          83 EYCSGGEL   90 (271)
T ss_dssp             ECCTTEEG
T ss_pred             eccCCCcH
Confidence            99999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.4e-15  Score=97.02  Aligned_cols=82  Identities=15%  Similarity=0.216  Sum_probs=73.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      ++|...+.||+|.||  .||++.+ .+..+++|.++...  .....+.+|+..+..++|||++++++++......++|||
T Consensus         4 ~~~~~~~~iG~G~fg--~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~E   79 (258)
T d1k2pa_           4 KDLTFLKELGTGQFG--VVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   79 (258)
T ss_dssp             CCCCCCCCCCEETTE--EEEEEEETTTEEEEEEEEESSS--SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEE
T ss_pred             HHCEEeEEEecCCCe--EEEEEEECCCCEEEEEEECcCc--CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Confidence            578889999999999  9999999 77889999998653  345678999999999999999999999998899999999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus        80 y~~~g~l   86 (258)
T d1k2pa_          80 YMANGCL   86 (258)
T ss_dssp             CCTTEEH
T ss_pred             ccCCCcH
Confidence            9998863

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.1e-15  Score=101.39  Aligned_cols=85  Identities=7%  Similarity=0.051  Sum_probs=74.9

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .++|...+.||+|.||  .||++..  ++..+++|.++..........+.+|+.+++.++|||++++++++......++|
T Consensus         5 ~d~y~~~~~iG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           5 DDDFEKISELGAGNGG--VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             GGGEEEEEEEECCSSC--CEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4578888999999999  9999998  78899999997654334457789999999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        83 mEy~~gg~L   91 (322)
T d1s9ja_          83 MEHMDGGSL   91 (322)
T ss_dssp             EECCTTEEH
T ss_pred             EEcCCCCcH
Confidence            999999875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3.3e-15  Score=98.01  Aligned_cols=83  Identities=17%  Similarity=0.177  Sum_probs=73.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ..|...+.||+|.||  .||++..  ++..+++|.+.... ......+.+|+.+++.++|||++++++++...+..++||
T Consensus        20 ~~Y~~~~~iG~G~fg--~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          20 KKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             TTBCSCEECCCSSSC--EEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccEEEEEEecCcCc--EEEEEEECCCCCEEEEEEEeccc-ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            358889999999999  9999998  78899999987543 223567889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        97 Ey~~gg~L  104 (293)
T d1yhwa1          97 EYLAGGSL  104 (293)
T ss_dssp             ECCTTCBH
T ss_pred             EecCCCcH
Confidence            99999975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.4e-15  Score=98.78  Aligned_cols=88  Identities=15%  Similarity=0.252  Sum_probs=74.0

Q ss_pred             HHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           29 KELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        29 ~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      ++|+...++|...+.||+|.||  .||++.+ .+..+++|.++...  .....+.+|+..+..++|||++++++++.. +
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg--~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~   80 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-E   80 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTE--EEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             CCeecCHHHeEEeEEEecCCCc--EEEEEEECCCCEEEEEEEccCc--CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-C
Confidence            3444556678889999999999  9999999 77889999997653  335678999999999999999999998754 6


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        81 ~~~iv~Ey~~~g~L   94 (272)
T d1qpca_          81 PIYIITEYMENGSL   94 (272)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             CeEEEEEeCCCCcH
Confidence            67999999999975

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.57  E-value=4.7e-15  Score=99.38  Aligned_cols=84  Identities=12%  Similarity=0.082  Sum_probs=75.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .++|...+.||+|.||  .||++..  ++..+++|.+.... ......+.+|+.++..++|||++++++++......++|
T Consensus        25 l~~Y~i~~~lG~G~fg--~Vy~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv  101 (350)
T d1koaa2          25 LDHYDIHEELGTGAFG--VVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI  101 (350)
T ss_dssp             GGTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECCCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccCeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEcccc-hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            3579999999999999  9999998  78899999997654 34467788999999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus       102 mE~~~gg~L  110 (350)
T d1koaa2         102 YEFMSGGEL  110 (350)
T ss_dssp             ECCCCSCBH
T ss_pred             EEcCCCCCH
Confidence            999999975

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.6e-15  Score=99.28  Aligned_cols=83  Identities=17%  Similarity=0.161  Sum_probs=73.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.++... ......+.+|+.+++.++|||++++++++...+..++||
T Consensus        12 d~Y~i~~~iG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvm   88 (288)
T d2jfla1          12 DFWEIIGELGDGAFG--KVYKAQNKETSVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI   88 (288)
T ss_dssp             GTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECSS-SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cCeEEeEEEeeCCCc--EEEEEEECCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEE
Confidence            457888999999999  9999998  78889999987654 344567889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        89 Ey~~~g~L   96 (288)
T d2jfla1          89 EFCAGGAV   96 (288)
T ss_dssp             ECCTTEEH
T ss_pred             ecCCCCcH
Confidence            99999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.56  E-value=6.2e-15  Score=98.85  Aligned_cols=83  Identities=16%  Similarity=0.120  Sum_probs=74.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.++... ......+.+|+.+++.++|||++++++++......++||
T Consensus        29 d~Y~i~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm  105 (352)
T d1koba_          29 DYYDILEELGSGAFG--VVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  105 (352)
T ss_dssp             GTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEECCcc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            468899999999999  9999998  78899999988664 344567889999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus       106 E~~~gg~L  113 (352)
T d1koba_         106 EFLSGGEL  113 (352)
T ss_dssp             ECCCCCBH
T ss_pred             EcCCCChH
Confidence            99999875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=8.7e-15  Score=97.00  Aligned_cols=82  Identities=12%  Similarity=0.057  Sum_probs=73.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.++...  .....+.+|+.++..++|||++++++++......++||
T Consensus         5 ~rY~i~~~lG~G~fg--~Vy~~~~~~~~~~~AiK~i~~~~--~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvm   80 (321)
T d1tkia_           5 EKYMIAEDLGRGEFG--IVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEcCCc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            467888999999999  9999998  78899999998763  44556789999999999999999999999999999999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        81 E~~~gg~L   88 (321)
T d1tkia_          81 EFISGLDI   88 (321)
T ss_dssp             CCCCCCBH
T ss_pred             ecCCCCcH
Confidence            99999875

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5.3e-15  Score=95.90  Aligned_cols=84  Identities=13%  Similarity=0.202  Sum_probs=70.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec--CCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE--TPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~--~~~~~  110 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.++... .......+.+|+.+++.++|||++++++.+..  ...++
T Consensus         4 edy~~~~~iG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~   81 (269)
T d2java1           4 EDYEVLYTIGTGSYG--RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   81 (269)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEE
T ss_pred             hhCEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEE
Confidence            468888999999999  9999998  78899999987654 23445678899999999999999999998864  45689


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        82 ivmEy~~~g~L   92 (269)
T d2java1          82 IVMEYCEGGDL   92 (269)
T ss_dssp             EEEECCTTEEH
T ss_pred             EEEecCCCCcH
Confidence            99999999875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=7.9e-15  Score=95.99  Aligned_cols=84  Identities=13%  Similarity=0.068  Sum_probs=73.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-----hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-----DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-----~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.+.....     ......+.+|+.+++.++|||++++++++.....
T Consensus        10 d~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_          10 DYYDTGEELGSGQFA--VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   87 (293)
T ss_dssp             GTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCEEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            468889999999999  9999998  688999999865431     1125678899999999999999999999999999


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus        88 ~~iv~E~~~gg~L  100 (293)
T d1jksa_          88 VILILELVAGGEL  100 (293)
T ss_dssp             EEEEEECCCSCBH
T ss_pred             EEEEEEcCCCccc
Confidence            9999999999875

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.55  E-value=2.5e-15  Score=99.14  Aligned_cols=85  Identities=15%  Similarity=0.128  Sum_probs=69.0

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .+.|...+.||+|.||  .||++..  ++..+++|.+...........+.+|+.+++.++|||++++++++......++|
T Consensus         8 ~d~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv   85 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFS--EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI   85 (307)
T ss_dssp             GGTEEEEEESBSGGGG--GEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeccCe--EEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            3458888999999999  9999998  68889999997654223345678899999999999999999999999999999


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        86 mE~~~gg~L   94 (307)
T d1a06a_          86 MQLVSGGEL   94 (307)
T ss_dssp             ECCCCSCBH
T ss_pred             EeccCCCcH
Confidence            999999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.1e-14  Score=95.06  Aligned_cols=83  Identities=17%  Similarity=0.252  Sum_probs=68.4

Q ss_pred             cCCCcCC-eeecCCCccceEEEEEe----CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDERE-VIKQCDFYITKLYKGFW----QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~-~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      +++...+ +||+|.||  .||+|.+    .+..+++|.++..........+.+|+.++..++|||++++++++.. +..+
T Consensus         8 ~~~~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~   84 (285)
T d1u59a_           8 DNLLIADIELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM   84 (285)
T ss_dssp             GGEEEEEEEEECCTTE--EEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred             cCeEECCcEEecccCe--EEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEE
Confidence            3455556 49999999  9999976    3457999999866534456789999999999999999999998864 5689


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        85 lvmE~~~~g~L   95 (285)
T d1u59a_          85 LVMEMAGGGPL   95 (285)
T ss_dssp             EEEECCTTEEH
T ss_pred             EEEEeCCCCcH
Confidence            99999999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.8e-15  Score=96.87  Aligned_cols=88  Identities=14%  Similarity=0.194  Sum_probs=73.6

Q ss_pred             HHHHHHhcCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           29 KELEIATNNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        29 ~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      ++|+...++|...+.||+|.||  .||++.+ .+..+++|.+....  .....+.+|+..+..++|+|++++++++. .+
T Consensus        10 ~~~~i~~~~~~i~~~iG~G~fg--~Vy~~~~~~~~~vAiK~l~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~   84 (285)
T d1fmka3          10 DAWEIPRESLRLEVKLGQGCFG--EVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EE   84 (285)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSC--EEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred             cceEcCHHHEEEeeEEeeCCCe--EEEEEEECCCCEEEEEEECccc--CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cC
Confidence            3444455689999999999999  9999999 66779999997653  33567899999999999999999999885 46


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        85 ~~~lv~Ey~~~g~l   98 (285)
T d1fmka3          85 PIYIVTEYMSKGSL   98 (285)
T ss_dssp             SCEEEECCCTTCBH
T ss_pred             CeEEEEEecCCCch
Confidence            68999999999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8.1e-15  Score=94.76  Aligned_cols=84  Identities=14%  Similarity=0.233  Sum_probs=72.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.+.....  ......+.+|+.+++.++|||++++++++......++
T Consensus         6 ~dy~i~~~iG~G~fg--~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i   83 (263)
T d2j4za1           6 EDFEIGRPLGKGKFG--NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   83 (263)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hHeEEEEEEecCCCc--EEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEE
Confidence            468888999999999  9999998  688999999864320  1124668889999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        84 vmEy~~~g~L   93 (263)
T d2j4za1          84 ILEYAPLGTV   93 (263)
T ss_dssp             EEECCTTCBH
T ss_pred             EEeecCCCcH
Confidence            9999999875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.2e-14  Score=95.90  Aligned_cols=100  Identities=16%  Similarity=0.202  Sum_probs=80.1

Q ss_pred             CCCcccccHH-HHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc
Q 045247           20 YNPYRIFSAK-ELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM   91 (121)
Q Consensus        20 ~~~~~~~~~~-~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l   91 (121)
                      ..++.+++++ .|+...++|...+.||+|.||  .||++.+       .+..+++|.++..........+.+|+..+..+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~l~~~iG~G~fg--~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l   83 (311)
T d1t46a_           6 YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL   83 (311)
T ss_dssp             CCCTTTSCCCGGGBCCGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred             eeCcccCCCcccccCCHHHeEEeeEEeecCCe--EEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhc
Confidence            3344455543 355566788889999999999  9999975       34579999998765344566788999999988


Q ss_pred             -CCCCcceeeeEEecCCccEEEEeccCCCCC
Q 045247           92 -DHKHILKLIGCCLETPIPILVFEYGEYRTL  121 (121)
Q Consensus        92 -~h~~~~~~~~~~~~~~~~~lv~e~~~~g~L  121 (121)
                       +|||++++++++......+++|||+++|+|
T Consensus        84 ~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l  114 (311)
T d1t46a_          84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDL  114 (311)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTEEH
T ss_pred             cCCCCEEEEEEEEeeCCEEEEEEEcCCCCCH
Confidence             599999999999999999999999998864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.2e-14  Score=94.46  Aligned_cols=86  Identities=21%  Similarity=0.288  Sum_probs=71.0

Q ss_pred             HHHhcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           32 EIATNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        32 ~~~~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      +...++|...+.||+|.||  .||++.+.+ .+++|.++... .......+.+|+..+..++|||++++++++.. +..+
T Consensus         4 ei~~~~~~~~~~lG~G~fg--~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~   79 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFG--TVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLA   79 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSC--EEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred             ccccccEEEEEEEeeCCCc--EEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEE
Confidence            3445689999999999999  999998743 48999987543 23446788999999999999999999998754 6789


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        80 lv~Ey~~~g~L   90 (276)
T d1uwha_          80 IVTQWCEGSSL   90 (276)
T ss_dssp             EEEECCCEEEH
T ss_pred             EEEecCCCCCH
Confidence            99999998875

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=1.6e-14  Score=95.32  Aligned_cols=82  Identities=17%  Similarity=0.278  Sum_probs=71.1

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      .|...+.||+|.||  .||++..  ++..+++|.++....  ......+.+|+.++..++|||++++++++...+..++|
T Consensus        16 ~y~~l~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          16 LFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hcEeeEEEecCCCe--EEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence            47888999999999  9999998  788899999876531  12246788999999999999999999999999999999


Q ss_pred             EeccCCCC
Q 045247          113 FEYGEYRT  120 (121)
Q Consensus       113 ~e~~~~g~  120 (121)
                      |||+++|+
T Consensus        94 ~E~~~~g~  101 (309)
T d1u5ra_          94 MEYCLGSA  101 (309)
T ss_dssp             EECCSEEH
T ss_pred             EEecCCCc
Confidence            99998875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=6.8e-15  Score=96.25  Aligned_cols=84  Identities=11%  Similarity=0.143  Sum_probs=72.1

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.+.....  ......+.+|+.+++.++|||++++++++...+..++
T Consensus         8 ~dy~i~~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i   85 (288)
T d1uu3a_           8 EDFKFGKILGEGSFS--TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF   85 (288)
T ss_dssp             GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEE
T ss_pred             CCCEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEE
Confidence            468889999999999  9999998  688999999864320  1224678899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        86 vmEy~~gg~L   95 (288)
T d1uu3a_          86 GLSYAKNGEL   95 (288)
T ss_dssp             EECCCTTEEH
T ss_pred             EEEccCCCCH
Confidence            9999999875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.50  E-value=4e-14  Score=92.90  Aligned_cols=90  Identities=23%  Similarity=0.322  Sum_probs=77.5

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeE
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGC  102 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~  102 (121)
                      +++.++++|...+.||+|.||  .||++.+       .+..+++|.+...........+.+|+.+++.++|+|++++++.
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSC--EEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hccCCHHHcEEeEEEeeCCCe--EEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            445567789999999999999  9999986       2367999999866534446789999999999999999999999


Q ss_pred             EecCCccEEEEeccCCCCC
Q 045247          103 CLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~~~~~~lv~e~~~~g~L  121 (121)
                      +......+++|||+++|+|
T Consensus        85 ~~~~~~~~~v~e~~~~g~L  103 (301)
T d1lufa_          85 CAVGKPMCLLFEYMAYGDL  103 (301)
T ss_dssp             ECSSSSCEEEEECCTTCBH
T ss_pred             eccCCceEEEEEecCCCcH
Confidence            9999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=9.2e-15  Score=94.44  Aligned_cols=82  Identities=16%  Similarity=0.223  Sum_probs=68.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec-CCccEEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE-TPIPILVF  113 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-~~~~~lv~  113 (121)
                      .++|...+.||+|.||  .||++.+.+..+++|.++..   ...+.+.+|+..++.++|||++++++++.. .+..++||
T Consensus         6 ~~~~~~~~~lG~G~fg--~Vy~~~~~~~~vAvK~i~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~   80 (262)
T d1byga_           6 MKELKLLQTIGKGEFG--DVMLGDYRGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   80 (262)
T ss_dssp             GGGEEEEEEEEECSSC--EEEEEEETTEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             HHHeEEeEEEecCCCe--EEEEEEECCeEEEEEEECcH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence            3467778899999999  99999998888999999764   344678899999999999999999998865 45689999


Q ss_pred             eccCCCCC
Q 045247          114 EYGEYRTL  121 (121)
Q Consensus       114 e~~~~g~L  121 (121)
                      ||+++|+|
T Consensus        81 ey~~~g~L   88 (262)
T d1byga_          81 EYMAKGSL   88 (262)
T ss_dssp             CCCTTEEH
T ss_pred             eccCCCCH
Confidence            99999875

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.5e-14  Score=93.53  Aligned_cols=84  Identities=18%  Similarity=0.267  Sum_probs=68.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCe--EEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QER--LISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~--~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|.||  .||++.+  ++.  .+++|.++..........+.+|+..+..+ +|||++++++++...+..+
T Consensus        10 ~~~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   87 (309)
T d1fvra_          10 NDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   87 (309)
T ss_dssp             GGCEEEEEEECGGGC--EEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             HHcEEEEEEeeCCCc--EEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence            367788999999999  9999988  554  46788876543233456789999999998 6999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        88 iV~ey~~~g~L   98 (309)
T d1fvra_          88 LAIEYAPHGNL   98 (309)
T ss_dssp             EEECCCTTCBH
T ss_pred             EEEEecCCCcH
Confidence            99999999875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.3e-14  Score=94.39  Aligned_cols=90  Identities=17%  Similarity=0.250  Sum_probs=75.6

Q ss_pred             HHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeE
Q 045247           30 ELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGC  102 (121)
Q Consensus        30 ~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~  102 (121)
                      +|+...++|...+.||+|.||  .||++.+       .+..+++|.++..........+.+|+..++.++|+|++++++.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~   91 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFG--MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV   91 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSS--EEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             ceeecHHHeEEeeEEeeCCCe--EEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeE
Confidence            344455688889999999999  9999976       1357899999765434445678999999999999999999999


Q ss_pred             EecCCccEEEEeccCCCCC
Q 045247          103 CLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~~~~~~lv~e~~~~g~L  121 (121)
                      +...+..++||||+++|+|
T Consensus        92 ~~~~~~~~lv~e~~~~g~l  110 (308)
T d1p4oa_          92 VSQGQPTLVIMELMTRGDL  110 (308)
T ss_dssp             ECSSSSCEEEEECCTTCBH
T ss_pred             EecCCceeEEEeecCCCCH
Confidence            9998999999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=5.8e-14  Score=90.98  Aligned_cols=81  Identities=16%  Similarity=0.126  Sum_probs=67.4

Q ss_pred             CcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEec----CCccEE
Q 045247           39 DEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLE----TPIPIL  111 (121)
Q Consensus        39 ~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~----~~~~~l  111 (121)
                      ...+.||+|.||  .||++..  ++..+++|.+.... .......+.+|+.+++.++|||++++++++..    ....++
T Consensus        12 ~~~~~iG~G~fg--~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i   89 (270)
T d1t4ha_          12 KFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL   89 (270)
T ss_dssp             EEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             EeeeEEecCcCc--EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence            455689999999  9999998  67889999887543 23446678999999999999999999998864    345789


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        90 vmE~~~~g~L   99 (270)
T d1t4ha_          90 VTELMTSGTL   99 (270)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999975

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.5e-14  Score=92.00  Aligned_cols=85  Identities=20%  Similarity=0.292  Sum_probs=70.0

Q ss_pred             HhcCCCcCCeeecCCCccceEEEEEe--C---CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           34 ATNNYDEREVIKQCDFYITKLYKGFW--Q---ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        34 ~~~~~~~~~~ig~g~~~~~~v~~~~~--~---~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      ..++|...+.||+|.||  .||++.+  .   +..+++|.++..........+.+|+..++.++|||++++++.+. .+.
T Consensus         5 ~~~~~~l~~~iG~G~fg--~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~   81 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFG--DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP   81 (273)
T ss_dssp             CGGGEEEEEEEEECSSS--EEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred             CHHHeEEEEEEeeCCCc--EEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCe
Confidence            34578889999999999  9999987  2   34588888876543444677999999999999999999999885 467


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|+|
T Consensus        82 ~~iv~E~~~~g~l   94 (273)
T d1mp8a_          82 VWIIMELCTLGEL   94 (273)
T ss_dssp             CEEEEECCTTEEH
T ss_pred             EEEEEEeccCCcH
Confidence            8999999998753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.47  E-value=2.9e-14  Score=94.32  Aligned_cols=84  Identities=10%  Similarity=0.132  Sum_probs=72.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.++....  ......+.+|+.+++.++|||++++++++......++
T Consensus         4 ~dy~i~~~lG~G~fg--~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   81 (316)
T d1fota_           4 QDFQILRTLGTGSFG--RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             hHeEEEEEEecCcCc--EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeee
Confidence            468889999999999  9999998  688999999864320  1224678899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+++|+|
T Consensus        82 vmE~~~gg~l   91 (316)
T d1fota_          82 IMDYIEGGEL   91 (316)
T ss_dssp             EECCCCSCBH
T ss_pred             EeeecCCccc
Confidence            9999999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.3e-13  Score=89.81  Aligned_cols=83  Identities=17%  Similarity=0.260  Sum_probs=70.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-C-C----eEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCcc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-Q-E----RLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~-~----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~  109 (121)
                      +.|...+.||+|.||  .||++.+ . +    ..+++|.+...........+.+|+.++..++|+|++++++++......
T Consensus         7 ~~~~~~~~iG~G~fG--~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~   84 (283)
T d1mqba_           7 SCVTRQKVIGAGEFG--EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM   84 (283)
T ss_dssp             TTEEEEEEEEECSSS--EEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             HHeEeeeEEeeCCCe--EEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCce
Confidence            356777899999999  9999987 2 2    468999987665445566789999999999999999999999999999


Q ss_pred             EEEEeccCCCC
Q 045247          110 ILVFEYGEYRT  120 (121)
Q Consensus       110 ~lv~e~~~~g~  120 (121)
                      +++|||+.+|.
T Consensus        85 ~~v~e~~~~~~   95 (283)
T d1mqba_          85 MIITEYMENGA   95 (283)
T ss_dssp             EEEEECCTTEE
T ss_pred             EEEEEecccCc
Confidence            99999998864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.2e-14  Score=94.87  Aligned_cols=85  Identities=13%  Similarity=0.100  Sum_probs=73.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      .++|...+.||+|.||  .||++..  ++..+++|.++...  .......+.+|+.+++.++|||++++++.+......+
T Consensus         4 l~dy~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~   81 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             GGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             hHhcEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccc
Confidence            3578889999999999  9999998  78899999987532  0122466888999999999999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        82 iv~ey~~gg~L   92 (337)
T d1o6la_          82 FVMEYANGGEL   92 (337)
T ss_dssp             EEEECCTTCBH
T ss_pred             cceeccCCCch
Confidence            99999999975

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.2e-13  Score=89.66  Aligned_cols=77  Identities=19%  Similarity=0.319  Sum_probs=62.0

Q ss_pred             CeeecCCCccceEEEEEe----CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEecc
Q 045247           42 EVIKQCDFYITKLYKGFW----QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG  116 (121)
Q Consensus        42 ~~ig~g~~~~~~v~~~~~----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e~~  116 (121)
                      +.||+|.||  .||+|.+    .+..+++|.++... .......+.+|+.+++.++|||++++++++.. +..++||||+
T Consensus        13 k~iG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~   89 (277)
T d1xbba_          13 KELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA   89 (277)
T ss_dssp             EEEEECSSE--EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred             CCcccCCCe--EEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcC
Confidence            469999999  9999987    24679999987543 12335679999999999999999999999854 5678999999


Q ss_pred             CCCCC
Q 045247          117 EYRTL  121 (121)
Q Consensus       117 ~~g~L  121 (121)
                      ++|+|
T Consensus        90 ~~g~L   94 (277)
T d1xbba_          90 ELGPL   94 (277)
T ss_dssp             TTEEH
T ss_pred             CCCcH
Confidence            99875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.5e-14  Score=94.16  Aligned_cols=89  Identities=22%  Similarity=0.321  Sum_probs=70.7

Q ss_pred             HHHHhcCCCcCCeeecCCCccceEEEEEe--CC-----eEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeE
Q 045247           31 LEIATNNYDEREVIKQCDFYITKLYKGFW--QE-----RLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGC  102 (121)
Q Consensus        31 ~~~~~~~~~~~~~ig~g~~~~~~v~~~~~--~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~  102 (121)
                      |+...++|...+.||+|.||  .||++.+  .+     ..+++|.+...........+.+|+..+..+ +|||+++++++
T Consensus        32 wei~~~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~  109 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFG--KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA  109 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSE--EEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHHHeEEeeEEeeCCCe--EEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEE
Confidence            34455678889999999999  9999987  22     358888886554233456788899999888 79999999999


Q ss_pred             EecCCccEEEEeccCCCCC
Q 045247          103 CLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~~~~~~lv~e~~~~g~L  121 (121)
                      +...+..++||||+++|+|
T Consensus       110 ~~~~~~~~lv~Ey~~~g~L  128 (325)
T d1rjba_         110 CTLSGPIYLIFEYCCYGDL  128 (325)
T ss_dssp             ECSSSSCEEEEECCTTCBH
T ss_pred             EeeCCeEEEEEEcCCCCcH
Confidence            9999999999999999975

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.46  E-value=1.7e-13  Score=89.04  Aligned_cols=84  Identities=14%  Similarity=0.187  Sum_probs=71.6

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh--------hHHHHHHHHHHHHHhcC-CCCcceeeeEEe
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD--------SVYKYSINNIVYAAQMD-HKHILKLIGCCL  104 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~--------~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~  104 (121)
                      .+|...+.||+|.||  .||++..  .+..+++|.++.....        .....+.+|+.+++.++ |||++++++++.
T Consensus         3 ~~y~~~~~iG~G~~g--~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           3 ENYEPKEILGRGVSS--VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             ccCEEceEEecCcCe--EEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            368888999999999  9999998  7889999998764311        11346788999999997 999999999999


Q ss_pred             cCCccEEEEeccCCCCC
Q 045247          105 ETPIPILVFEYGEYRTL  121 (121)
Q Consensus       105 ~~~~~~lv~e~~~~g~L  121 (121)
                      .....++||||+++|+|
T Consensus        81 ~~~~~~ivmE~~~~g~L   97 (277)
T d1phka_          81 TNTFFFLVFDLMKKGEL   97 (277)
T ss_dssp             CSSEEEEEEECCTTCBH
T ss_pred             cCcceEEEEEcCCCchH
Confidence            99999999999999875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.45  E-value=1.4e-13  Score=89.19  Aligned_cols=84  Identities=20%  Similarity=0.222  Sum_probs=70.4

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----  107 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----  107 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.++....  ......+.+|+..++.++|||++++++++....    
T Consensus         7 drY~i~~~lG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           7 DRYELGEILGFGGMS--EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             ceeEEeEEEeeCCCe--EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            458888999999999  9999998  788999999976532  233567899999999999999999999886543    


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..|+||||+++|+|
T Consensus        85 ~~~lvmE~~~g~~L   98 (277)
T d1o6ya_          85 LPYIVMEYVDGVTL   98 (277)
T ss_dssp             EEEEEEECCCEEEH
T ss_pred             eEEEEEECCCCCEe
Confidence            37899999998764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.5e-13  Score=89.86  Aligned_cols=84  Identities=10%  Similarity=0.183  Sum_probs=68.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC--hhHHHHHHHHHHHHH-hcCCCCcceeeeEEecCCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP--DSVYKYSINNIVYAA-QMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~-~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.++....  ......+..+...+. .++|||++++++++......+
T Consensus         2 ddy~i~~~iG~G~fg--~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           2 EDFILHKMLGKGSFG--KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   79 (320)
T ss_dssp             TTEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             CCeEEeeEEecCCCc--EEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCcee
Confidence            468888999999999  9999998  789999999874320  112344556666554 689999999999999999999


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+++|+|
T Consensus        80 ivmEy~~~g~L   90 (320)
T d1xjda_          80 FVMEYLNGGDL   90 (320)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEeecCCCcH
Confidence            99999999875

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3e-13  Score=88.50  Aligned_cols=82  Identities=21%  Similarity=0.282  Sum_probs=68.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-hHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-SVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.||  .||++..  ++..+|+|.++..... .....+.+|+.+++.++|||++++++++......++|
T Consensus         2 d~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             TTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCEeccEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEE
Confidence            478888999999999  9999998  6889999999754311 1246788999999999999999999999999999999


Q ss_pred             EeccCCC
Q 045247          113 FEYGEYR  119 (121)
Q Consensus       113 ~e~~~~g  119 (121)
                      |||+.++
T Consensus        80 ~e~~~~~   86 (298)
T d1gz8a_          80 FEFLHQD   86 (298)
T ss_dssp             EECCSEE
T ss_pred             EeecCCc
Confidence            9998754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=7.5e-13  Score=87.22  Aligned_cols=79  Identities=22%  Similarity=0.336  Sum_probs=65.6

Q ss_pred             CCeeecCCCccceEEEEEe-C----CeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEec-CCccEEEEe
Q 045247           41 REVIKQCDFYITKLYKGFW-Q----ERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLE-TPIPILVFE  114 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~-~----~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~-~~~~~lv~e  114 (121)
                      .++||+|.||  .||+|.+ .    ...+++|.++.........++.+|+.++++++|||++++++++.. ....++|||
T Consensus        32 ~~~iG~G~fg--~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          32 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEETTE--EEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ceEEeecCCe--EEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            4679999999  9999988 2    235889998754434556889999999999999999999999865 457899999


Q ss_pred             ccCCCCC
Q 045247          115 YGEYRTL  121 (121)
Q Consensus       115 ~~~~g~L  121 (121)
                      |+++|+|
T Consensus       110 ~~~~g~l  116 (311)
T d1r0pa_         110 YMKHGDL  116 (311)
T ss_dssp             CCTTCBH
T ss_pred             EeecCch
Confidence            9999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.37  E-value=5.7e-13  Score=89.55  Aligned_cols=85  Identities=9%  Similarity=0.045  Sum_probs=67.4

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh--HHHHH---HHHHHHHHhcCCCCcceeeeEEecCC
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS--VYKYS---INNIVYAAQMDHKHILKLIGCCLETP  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~--~~~~~---~~~~~~l~~l~h~~~~~~~~~~~~~~  107 (121)
                      .++|...+.||+|.||  .||++..  ++..+++|.+.......  ....+   ..++..++.++|||++++++++...+
T Consensus         3 lddy~i~~~lG~G~fg--~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~   80 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD   80 (364)
T ss_dssp             STTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             HHhCeeeeEEecCCCe--EEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC
Confidence            3578889999999999  9999998  78899999986432000  11223   33456677788999999999999999


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        81 ~~~ivmE~~~gg~L   94 (364)
T d1omwa3          81 KLSFILDLMNGGDL   94 (364)
T ss_dssp             EEEEEECCCCSCBH
T ss_pred             EEEEEEEecCCCcH
Confidence            99999999999875

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=7.9e-13  Score=86.78  Aligned_cols=81  Identities=21%  Similarity=0.273  Sum_probs=62.6

Q ss_pred             CCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----ccEEE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----IPILV  112 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----~~~lv  112 (121)
                      .|...+.||+|.||  .||++.+.+..+++|.++...  ........++..+..++|||++++++++....    ..++|
T Consensus         4 ~~~l~~~iG~G~fg--~Vy~~~~~g~~vAvK~~~~~~--~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           4 TIVLQESIGKGRFG--EVWRGKWRGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEECCSSS--EEEEEEETTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCe--EEEEEEECCEEEEEEEECccc--hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            46777899999999  999999888899999986542  22222223444556788999999999997643    57899


Q ss_pred             EeccCCCCC
Q 045247          113 FEYGEYRTL  121 (121)
Q Consensus       113 ~e~~~~g~L  121 (121)
                      |||+++|+|
T Consensus        80 ~Ey~~~g~L   88 (303)
T d1vjya_          80 SDYHEHGSL   88 (303)
T ss_dssp             EECCTTCBH
T ss_pred             EecccCCCH
Confidence            999999875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=6.9e-13  Score=88.69  Aligned_cols=84  Identities=11%  Similarity=0.089  Sum_probs=71.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPIL  111 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~l  111 (121)
                      ++|...+.||+|.||  .||++..  ++..+++|.+....  .......+.+|+.+++.++|||++++++.+......++
T Consensus        41 d~y~i~~~lG~G~fg--~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~  118 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFG--RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCeEEEEEeecCcCc--EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccc
Confidence            368889999999999  9999998  78899999986431  01224668899999999999999999999999999999


Q ss_pred             EEeccCCCCC
Q 045247          112 VFEYGEYRTL  121 (121)
Q Consensus       112 v~e~~~~g~L  121 (121)
                      ||||+.+|+|
T Consensus       119 v~e~~~~g~l  128 (350)
T d1rdqe_         119 VMEYVAGGEM  128 (350)
T ss_dssp             EEECCTTCBH
T ss_pred             ccccccccch
Confidence            9999999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.3e-12  Score=84.99  Aligned_cols=82  Identities=21%  Similarity=0.456  Sum_probs=64.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCe----EEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccE
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QER----LISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPI  110 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~----~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~  110 (121)
                      +|...+.||+|.||  .||++.+  ++.    .+++|.+...........+.+|+.+++.++|||++++++++.. +..+
T Consensus        10 dy~~~~~lG~G~fG--~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~   86 (317)
T d1xkka_          10 EFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQ   86 (317)
T ss_dssp             TEEEEEEEEECSSE--EEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred             HCEEeeEEecCCCe--EEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCee
Confidence            58888999999999  9999987  333    5888888654323346779999999999999999999999976 5677


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +++|++.+|+|
T Consensus        87 ~v~e~~~~~~l   97 (317)
T d1xkka_          87 LITQLMPFGCL   97 (317)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEEeccCCcc
Confidence            88899988764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.4e-12  Score=85.28  Aligned_cols=78  Identities=15%  Similarity=0.274  Sum_probs=62.9

Q ss_pred             CCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChh----HHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEEe
Q 045247           41 REVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDS----VYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVFE  114 (121)
Q Consensus        41 ~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~----~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~e  114 (121)
                      .+.||+|.||  .||++..  ++..+|+|.++......    ....+.+|+.+++.++|||++++++++......++|||
T Consensus         3 l~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE   80 (299)
T d1ua2a_           3 LDFLGEGQFA--TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFD   80 (299)
T ss_dssp             EEEEEEETTE--EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEE
T ss_pred             ceEeccCcCe--EEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhh
Confidence            3689999999  9999998  68899999987543111    12467889999999999999999999999999999999


Q ss_pred             ccCCCC
Q 045247          115 YGEYRT  120 (121)
Q Consensus       115 ~~~~g~  120 (121)
                      |+.++.
T Consensus        81 ~~~~~~   86 (299)
T d1ua2a_          81 FMETDL   86 (299)
T ss_dssp             CCSEEH
T ss_pred             hhcchH
Confidence            998653

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=9.8e-13  Score=86.13  Aligned_cols=87  Identities=14%  Similarity=0.205  Sum_probs=66.5

Q ss_pred             HHhcCCCcCCeeecCCCccceEEEEEe--C-------CeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcceeeeE
Q 045247           33 IATNNYDEREVIKQCDFYITKLYKGFW--Q-------ERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILKLIGC  102 (121)
Q Consensus        33 ~~~~~~~~~~~ig~g~~~~~~v~~~~~--~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~~~~~  102 (121)
                      ...++|...+.||+|.||  .||++..  .       +..+++|.++..........+..+...+..+ +|+|+++++++
T Consensus        10 i~~~~~~l~~~iG~G~fg--~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFG--QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             CCGGGEEEEEECC-------CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccHHHeEEeeEEeecCCc--EEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            344578888999999999  9999976  2       1368999987765344457788888888777 79999999999


Q ss_pred             EecCCccEEEEeccCCCCC
Q 045247          103 CLETPIPILVFEYGEYRTL  121 (121)
Q Consensus       103 ~~~~~~~~lv~e~~~~g~L  121 (121)
                      +......++||||+++|+|
T Consensus        88 ~~~~~~~~~v~e~~~~g~l  106 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNL  106 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBH
T ss_pred             cccCCeEEEEEEccCCCcH
Confidence            9999999999999999874

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.30  E-value=1.3e-12  Score=84.87  Aligned_cols=82  Identities=20%  Similarity=0.227  Sum_probs=70.7

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ++|...+.||+|.||  .||++.. .+..+|+|.++.... ......+.+|+.+++.++|||++++++.+...+..++++
T Consensus         2 ~~Y~~~~~iG~G~fg--~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~   79 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYG--VVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (286)
T ss_dssp             CSEEEEEEEEEETTE--EEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CCceeccEEecCCCc--EEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEE
Confidence            467888999999999  9999998 788999999976531 112467889999999999999999999999999999999


Q ss_pred             eccCCC
Q 045247          114 EYGEYR  119 (121)
Q Consensus       114 e~~~~g  119 (121)
                      |++.++
T Consensus        80 e~~~~~   85 (286)
T d1ob3a_          80 EHLDQD   85 (286)
T ss_dssp             ECCSEE
T ss_pred             Eeehhh
Confidence            998764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.9e-12  Score=83.83  Aligned_cols=83  Identities=18%  Similarity=0.293  Sum_probs=60.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe---CC--eEEEEEEecCCC--ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW---QE--RLISVLKFDESL--PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPI  108 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~---~~--~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~  108 (121)
                      .+|...+.||+|.||  .||++.+   .+  ..+++|.+....  .......+.+|+.++..++|||++++++++.. +.
T Consensus         8 ~d~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~   84 (273)
T d1u46a_           8 KDLRLLEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PP   84 (273)
T ss_dssp             GGEEEEEECC----C--CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             HHeEEEEEEecCCCe--EEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cc
Confidence            457888899999999  9999987   22  367899886543  12335678999999999999999999999965 57


Q ss_pred             cEEEEeccCCCCC
Q 045247          109 PILVFEYGEYRTL  121 (121)
Q Consensus       109 ~~lv~e~~~~g~L  121 (121)
                      .++||||+++|++
T Consensus        85 ~~lv~e~~~~~~l   97 (273)
T d1u46a_          85 MKMVTELAPLGSL   97 (273)
T ss_dssp             CEEEEECCTTCBH
T ss_pred             hheeeeeecCcch
Confidence            7899999998863

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=5e-12  Score=82.03  Aligned_cols=83  Identities=17%  Similarity=0.283  Sum_probs=71.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~~~~lv  112 (121)
                      +.|...+.||+|.||  .||++..  ++..+|+|.++... .......+.+|+.+++.++|+|++++.+.+......+++
T Consensus         2 ~ry~~i~~LG~G~fg--~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv   79 (292)
T d1unla_           2 QKYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CSEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCEeeeEEecCcCe--EEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEE
Confidence            357788999999999  9999998  77889999986543 123467889999999999999999999999999999999


Q ss_pred             EeccCCCC
Q 045247          113 FEYGEYRT  120 (121)
Q Consensus       113 ~e~~~~g~  120 (121)
                      ++++.++.
T Consensus        80 ~~~~~~~~   87 (292)
T d1unla_          80 FEFCDQDL   87 (292)
T ss_dssp             EECCSEEH
T ss_pred             eeeccccc
Confidence            99987653

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.28  E-value=1e-11  Score=81.94  Aligned_cols=80  Identities=14%  Similarity=0.204  Sum_probs=68.3

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEec--CCccE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLE--TPIPI  110 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~--~~~~~  110 (121)
                      ++|...+.||+|.||  .||++..  ++..+|+|+++...    ...+.+|+.++..+. |+|++++++++..  ....+
T Consensus        35 d~y~i~~~LG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~  108 (328)
T d3bqca1          35 DDYQLVRKLGRGKYS--EVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA  108 (328)
T ss_dssp             GGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSSC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred             cCeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEECHHH----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence            468889999999999  9999998  78899999987542    456788999999985 9999999999874  35689


Q ss_pred             EEEeccCCCCC
Q 045247          111 LVFEYGEYRTL  121 (121)
Q Consensus       111 lv~e~~~~g~L  121 (121)
                      +||||+.+++|
T Consensus       109 ~v~e~~~~~~L  119 (328)
T d3bqca1         109 LVFEHVNNTDF  119 (328)
T ss_dssp             EEEECCCSCBG
T ss_pred             EEEeecCCCcH
Confidence            99999998865

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=6.3e-12  Score=82.10  Aligned_cols=93  Identities=14%  Similarity=0.268  Sum_probs=70.1

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCCccceEEEEEe-------CCeEEEEEEecCCCChhHHHHHHHHHHHHHhc-CCCCcce
Q 045247           27 SAKELEIATNNYDEREVIKQCDFYITKLYKGFW-------QERLISVLKFDESLPDSVYKYSINNIVYAAQM-DHKHILK   98 (121)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ig~g~~~~~~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~~~~   98 (121)
                      ..+.|+...++|...+.||+|.||  .||++.+       .++.+++|.+...........+..+...+..+ +|+|++.
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~   81 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   81 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSC--EEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCccccccHHHEEEeeEEeecCCe--EEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            345565666789999999999999  9999986       23578999987654344556677777777666 5889999


Q ss_pred             eeeEEecC-CccEEEEeccCCCCC
Q 045247           99 LIGCCLET-PIPILVFEYGEYRTL  121 (121)
Q Consensus        99 ~~~~~~~~-~~~~lv~e~~~~g~L  121 (121)
                      +.+.+... ...++||||+++|+|
T Consensus        82 ~~~~~~~~~~~~~iv~E~~~~g~L  105 (299)
T d1ywna1          82 LLGACTKPGGPLMVIVEFCKFGNL  105 (299)
T ss_dssp             EEEEECSTTSCCEEEEECCTTCBH
T ss_pred             eeeeeccCCCeEEEEEEecCCCcH
Confidence            99887654 568999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=3.5e-12  Score=85.22  Aligned_cols=82  Identities=16%  Similarity=0.199  Sum_probs=67.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEec------C
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLE------T  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~------~  106 (121)
                      +.|...++||+|.||  .||++.+  ++..+|+|.+..... ......+.+|+.+++.++|||++++++++..      .
T Consensus        17 ~~Y~i~~~LG~G~fg--~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~   94 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF   94 (355)
T ss_dssp             TTEEEEEECSCC--C--EEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             CCeEEEEEeecCcCe--EEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence            468889999999999  9999998  689999999986542 2335678899999999999999999999864      3


Q ss_pred             CccEEEEeccCCC
Q 045247          107 PIPILVFEYGEYR  119 (121)
Q Consensus       107 ~~~~lv~e~~~~g  119 (121)
                      ..+++||||+.++
T Consensus        95 ~~~~iv~Ey~~~~  107 (355)
T d2b1pa1          95 QDVYLVMELMDAN  107 (355)
T ss_dssp             CEEEEEEECCSEE
T ss_pred             ceeEEEEeccchH
Confidence            5789999999765

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=4.7e-12  Score=84.14  Aligned_cols=78  Identities=12%  Similarity=0.140  Sum_probs=62.4

Q ss_pred             cCCCcC-CeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHh-cCCCCcceeeeEEec----CC
Q 045247           36 NNYDER-EVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQ-MDHKHILKLIGCCLE----TP  107 (121)
Q Consensus        36 ~~~~~~-~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~-l~h~~~~~~~~~~~~----~~  107 (121)
                      ++|... +.||+|.||  .||++..  ++..+|+|.++..      ....+|+..+.+ .+|||++++++++..    ..
T Consensus        11 ~~y~i~~~~lG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~   82 (335)
T d2ozaa1          11 DDYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK   82 (335)
T ss_dssp             GTEEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             cCEEEeeEEeeeccCe--EEEEEEECCCCCEEEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence            467765 469999999  9999998  7889999998653      235567776554 579999999998864    35


Q ss_pred             ccEEEEeccCCCCC
Q 045247          108 IPILVFEYGEYRTL  121 (121)
Q Consensus       108 ~~~lv~e~~~~g~L  121 (121)
                      ..++||||+++|+|
T Consensus        83 ~~~ivmEy~~gg~L   96 (335)
T d2ozaa1          83 CLLIVMECLDGGEL   96 (335)
T ss_dssp             EEEEEEECCCSEEH
T ss_pred             EEEEEEECCCCCcH
Confidence            68999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=3.3e-11  Score=80.09  Aligned_cols=81  Identities=10%  Similarity=0.141  Sum_probs=62.1

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCC-ChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESL-PDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----  107 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----  107 (121)
                      .+.|...+.||+|.||  .||++..  ++..+|+|.++... .......+.+|+.+++.++|+|++++++++....    
T Consensus        17 ~~~Y~~i~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~   94 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYG--AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD   94 (346)
T ss_dssp             BSSEEEEEEC--------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             CCcEEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccc
Confidence            3568888999999999  9999998  68899999997543 2334677889999999999999999999987543    


Q ss_pred             --ccEEEEeccC
Q 045247          108 --IPILVFEYGE  117 (121)
Q Consensus       108 --~~~lv~e~~~  117 (121)
                        ..++||||+.
T Consensus        95 ~~~~~lv~e~~~  106 (346)
T d1cm8a_          95 FTDFYLVMPFMG  106 (346)
T ss_dssp             CCCCEEEEECCS
T ss_pred             cceEEEEEeccc
Confidence              4699999984

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.6e-11  Score=80.68  Aligned_cols=84  Identities=8%  Similarity=0.082  Sum_probs=64.0

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecCC----cc
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLETP----IP  109 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~~----~~  109 (121)
                      ..|...+.||+|.||  .||++..  ++..+|+|.++..........+.+|+.+++.++|+|++++++.+....    ..
T Consensus         8 ~rY~~~~~LG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           8 PRYTNLSYIGEGAYG--MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             TTEEEEEECC---CC--CEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             CCeEEEEEEeeccCe--EEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            458888999999999  9999988  788999999976542344667889999999999999999999986543    23


Q ss_pred             EEEEeccCCCCC
Q 045247          110 ILVFEYGEYRTL  121 (121)
Q Consensus       110 ~lv~e~~~~g~L  121 (121)
                      +++++++.+|+|
T Consensus        86 ~~l~~~~~~g~L   97 (345)
T d1pmea_          86 VYLVTHLMGADL   97 (345)
T ss_dssp             EEEEEECCCEEH
T ss_pred             EEEEEeecCCch
Confidence            455566667654

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=2.2e-11  Score=80.85  Aligned_cols=85  Identities=11%  Similarity=0.101  Sum_probs=68.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEecC-----
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLET-----  106 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~-----  106 (121)
                      .+.|...+.||+|.||  .||++..  ++..+|+|.++.... ......+.+|+.+++.++|+|++++++++...     
T Consensus        17 ~~rY~i~~~LG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~   94 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   94 (348)
T ss_dssp             ETTEEEEEECGGGTTS--SEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTT
T ss_pred             CCCeEEEEEEecCCCe--EEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecccccc
Confidence            3568899999999999  9999998  789999999976531 23456788999999999999999999988643     


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...+++++++.+|+|
T Consensus        95 ~~~~~i~~~~~gg~L  109 (348)
T d2gfsa1          95 FNDVYLVTHLMGADL  109 (348)
T ss_dssp             CCCCEEEEECCSEEH
T ss_pred             CceEEEEEeecCCch
Confidence            234666777777764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=4.9e-11  Score=78.32  Aligned_cols=83  Identities=18%  Similarity=0.273  Sum_probs=65.2

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCC-hhHHHHHHHHHHHHHhcCCCCcceeeeEEec------
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLP-DSVYKYSINNIVYAAQMDHKHILKLIGCCLE------  105 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~------  105 (121)
                      .++|...+.||+|.||  .||++..  .+..+|+|.+..... ......+.+|+.+++.++|+|++++.+.+..      
T Consensus         9 ~~rY~i~~~LG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~   86 (318)
T d3blha1           9 VSKYEKLAKIGQGTFG--EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN   86 (318)
T ss_dssp             GGGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred             cCCEEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence            4578999999999999  9999998  788999999865431 2224667899999999999999999988854      


Q ss_pred             --CCccEEEEeccCCC
Q 045247          106 --TPIPILVFEYGEYR  119 (121)
Q Consensus       106 --~~~~~lv~e~~~~g  119 (121)
                        ....+++|||+.++
T Consensus        87 ~~~~~~~iv~e~~~~~  102 (318)
T d3blha1          87 RCKGSIYLVFDFCEHD  102 (318)
T ss_dssp             ----CEEEEEECCCEE
T ss_pred             ccCceEEEEEeccCCC
Confidence              24578999998754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=8.1e-12  Score=82.56  Aligned_cols=84  Identities=10%  Similarity=0.080  Sum_probs=69.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe-----CCeEEEEEEecCCCC---hhHHHHHHHHHHHHHhcCC-CCcceeeeEEecC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW-----QERLISVLKFDESLP---DSVYKYSINNIVYAAQMDH-KHILKLIGCCLET  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~-----~~~~~~~k~~~~~~~---~~~~~~~~~~~~~l~~l~h-~~~~~~~~~~~~~  106 (121)
                      ++|...+.||+|.||  .||++..     ++..+|+|.++....   ......+.+|+.++.+++| +|++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg--~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          24 ENFELLKVLGTGAYG--KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  101 (322)
T ss_dssp             GGEEEEEEEEETTTE--EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             hceEEEEEEecCCCe--EEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence            468899999999999  9999976     467899998864320   1123457788999999976 8999999999999


Q ss_pred             CccEEEEeccCCCCC
Q 045247          107 PIPILVFEYGEYRTL  121 (121)
Q Consensus       107 ~~~~lv~e~~~~g~L  121 (121)
                      ...+++|||+.+|+|
T Consensus       102 ~~~~~v~e~~~~~~L  116 (322)
T d1vzoa_         102 TKLHLILDYINGGEL  116 (322)
T ss_dssp             TEEEEEECCCCSCBH
T ss_pred             CceeeeeecccccHH
Confidence            999999999999875

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=4.1e-11  Score=79.83  Aligned_cols=76  Identities=18%  Similarity=0.278  Sum_probs=61.7

Q ss_pred             CCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcceeeeEEecC------Cc
Q 045247           37 NYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHILKLIGCCLET------PI  108 (121)
Q Consensus        37 ~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~~~~~~~~~~------~~  108 (121)
                      .|...++||+|.||  .||++..  ++..+|+|.+....  .   ...+|+.+++.++|+|++++++.+...      ..
T Consensus        21 ~Y~~~k~LG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~--~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~   93 (350)
T d1q5ka_          21 SYTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDK--R---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY   93 (350)
T ss_dssp             EEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCS--S---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCE
T ss_pred             CcEeeeEEeeCcCe--EEEEEEECCCCCEEEEEEECccc--h---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceE
Confidence            47777899999999  9999999  78899999987643  1   123588899999999999999988542      34


Q ss_pred             cEEEEeccCCC
Q 045247          109 PILVFEYGEYR  119 (121)
Q Consensus       109 ~~lv~e~~~~g  119 (121)
                      .++||||++++
T Consensus        94 ~~lv~Ey~~~~  104 (350)
T d1q5ka_          94 LNLVLDYVPET  104 (350)
T ss_dssp             EEEEEECCSEE
T ss_pred             EEEEEeccCCc
Confidence            78999999865

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.2e-11  Score=78.70  Aligned_cols=82  Identities=11%  Similarity=0.171  Sum_probs=66.2

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCCh-----hHHHHHHHHHHHHHhcC--CCCcceeeeEEecC
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPD-----SVYKYSINNIVYAAQMD--HKHILKLIGCCLET  106 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~l~~l~--h~~~~~~~~~~~~~  106 (121)
                      +.|...+.||+|.||  .||++..  ++..+++|.+......     .....+.+|+.+++.+.  |+|++++++.+...
T Consensus         4 ~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~   81 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFG--SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP   81 (273)
T ss_dssp             TTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             CeEEEeEEEeeCCCe--EEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence            468888999999999  9999998  7889999998643211     11233567888888876  89999999999999


Q ss_pred             CccEEEEeccCCC
Q 045247          107 PIPILVFEYGEYR  119 (121)
Q Consensus       107 ~~~~lv~e~~~~g  119 (121)
                      +..++||||+.++
T Consensus        82 ~~~~lv~e~~~~~   94 (273)
T d1xwsa_          82 DSFVLILERPEPV   94 (273)
T ss_dssp             SEEEEEEECCSSE
T ss_pred             CeEEEEEEeccCc
Confidence            9999999998753

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.97  E-value=5.7e-10  Score=72.58  Aligned_cols=77  Identities=10%  Similarity=-0.008  Sum_probs=63.5

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCC-CCcceeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDH-KHILKLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h-~~~~~~~~~~~~~~~~~lv  112 (121)
                      ++|...+.||+|.||  .||++..  ++..+|+|.+....   ....+..+...+..+.| ++++.+.+++......++|
T Consensus         5 ~~Y~i~~~iG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~v   79 (293)
T d1csna_           5 VHYKVGRRIGEGSFG--VIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   79 (293)
T ss_dssp             TTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             CceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEcccc---CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEE
Confidence            468889999999999  9999998  78899999886543   12335667777888874 8999999999999999999


Q ss_pred             EeccC
Q 045247          113 FEYGE  117 (121)
Q Consensus       113 ~e~~~  117 (121)
                      |||+.
T Consensus        80 me~~~   84 (293)
T d1csna_          80 IDLLG   84 (293)
T ss_dssp             EECCC
T ss_pred             EEecC
Confidence            99984

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.5e-10  Score=75.56  Aligned_cols=84  Identities=15%  Similarity=0.262  Sum_probs=60.8

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEe--C-CeEEEEEEecCCCCh-hHHHHHHHHHHHHH---hcCCCCcceeeeEEec--
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFW--Q-ERLISVLKFDESLPD-SVYKYSINNIVYAA---QMDHKHILKLIGCCLE--  105 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~--~-~~~~~~k~~~~~~~~-~~~~~~~~~~~~l~---~l~h~~~~~~~~~~~~--  105 (121)
                      .++|...+.||+|.||  .||++..  + +..+|+|.++..... .......+|+..++   ..+|||++++++++..  
T Consensus         6 ~~~Y~i~~~LG~G~fg--~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           6 DQQYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   83 (305)
T ss_dssp             GGTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             cCCEEEEEEEecccCe--EEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence            3578999999999999  9999987  3 567899988643211 11223445555544   4589999999998853  


Q ss_pred             ---CCccEEEEeccCCCC
Q 045247          106 ---TPIPILVFEYGEYRT  120 (121)
Q Consensus       106 ---~~~~~lv~e~~~~g~  120 (121)
                         ....+++|||+.++.
T Consensus        84 ~~~~~~~~~~~e~~~~~~  101 (305)
T d1blxa_          84 TDRETKLTLVFEHVDQDL  101 (305)
T ss_dssp             CSSEEEEEEEEECCSCBH
T ss_pred             cccCceEEEEEEeccCCc
Confidence               246789999998763

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.88  E-value=2.8e-09  Score=69.25  Aligned_cols=79  Identities=14%  Similarity=-0.003  Sum_probs=61.9

Q ss_pred             cCCCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcCCCCcc-eeeeEEecCCccEEE
Q 045247           36 NNYDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMDHKHIL-KLIGCCLETPIPILV  112 (121)
Q Consensus        36 ~~~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~~~-~~~~~~~~~~~~~lv  112 (121)
                      +.|...+.||+|.||  .||++.+  ++..+|+|.+....   ....+..|+.+++.++|++.+ .+..+....+..++|
T Consensus         7 ~rY~l~~~iG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~iv   81 (299)
T d1ckia_           7 NRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   81 (299)
T ss_dssp             TTEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEESCT---TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CEEEEeEEEeeCCCc--EEEEEEECCCCCEEEEEEEchhc---cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEE
Confidence            358889999999999  9999998  68899999877543   223467788899999877655 445555677888999


Q ss_pred             EeccCCC
Q 045247          113 FEYGEYR  119 (121)
Q Consensus       113 ~e~~~~g  119 (121)
                      |||+.++
T Consensus        82 me~~~~~   88 (299)
T d1ckia_          82 MELLGPS   88 (299)
T ss_dssp             EECCCCB
T ss_pred             EEEcCCc
Confidence            9998653

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.28  E-value=1.7e-06  Score=56.93  Aligned_cols=76  Identities=12%  Similarity=0.068  Sum_probs=56.9

Q ss_pred             CCcCCeeecCCCccceEEEEEe--CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-----------CCCcceeeeEEe
Q 045247           38 YDEREVIKQCDFYITKLYKGFW--QERLISVLKFDESLPDSVYKYSINNIVYAAQMD-----------HKHILKLIGCCL  104 (121)
Q Consensus        38 ~~~~~~ig~g~~~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-----------h~~~~~~~~~~~  104 (121)
                      |...+.||+|.||  .||++..  ++..+|+|+++...  .......+|+..+..+.           |+|++++++.+.
T Consensus        15 Y~i~~~LG~G~fg--~Vy~~~~~~~g~~vAvKvi~~~~--~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          15 YILVRKLGWGHFS--TVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             EEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             EEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeccc--cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            8889999999999  9999998  78999999997652  33455666777666554           578888888775


Q ss_pred             c--CCccEEEEeccC
Q 045247          105 E--TPIPILVFEYGE  117 (121)
Q Consensus       105 ~--~~~~~lv~e~~~  117 (121)
                      .  ....++++++..
T Consensus        91 ~~~~~~~~~~~~~~~  105 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEV  105 (362)
T ss_dssp             EEETTEEEEEEEECC
T ss_pred             eccccceeeeeeecc
Confidence            4  345566666554

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.22  E-value=4.9e-06  Score=50.23  Aligned_cols=74  Identities=5%  Similarity=-0.042  Sum_probs=52.6

Q ss_pred             cCCeeecCCCccceEEEEEe-CCeEEEEEEecCCCCh-----------------hHHHHHHHHHHHHHhcCCCCcceeee
Q 045247           40 EREVIKQCDFYITKLYKGFW-QERLISVLKFDESLPD-----------------SVYKYSINNIVYAAQMDHKHILKLIG  101 (121)
Q Consensus        40 ~~~~ig~g~~~~~~v~~~~~-~~~~~~~k~~~~~~~~-----------------~~~~~~~~~~~~l~~l~h~~~~~~~~  101 (121)
                      +.+.||+|.||  .||++.. .+..+++|.++.....                 ........+...+..+.|.+++..++
T Consensus         4 vg~~IG~G~~g--~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           4 IGKLMGEGKES--AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEECSSE--EEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hCCEeeeCcce--EEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            45789999999  9999998 8899999987642200                 00123345677788888998888765


Q ss_pred             EEecCCccEEEEeccCCC
Q 045247          102 CCLETPIPILVFEYGEYR  119 (121)
Q Consensus       102 ~~~~~~~~~lv~e~~~~g  119 (121)
                      ..    ..+++|||+++.
T Consensus        82 ~~----~~~lvme~~~~~   95 (191)
T d1zara2          82 WE----GNAVLMELIDAK   95 (191)
T ss_dssp             EE----TTEEEEECCCCE
T ss_pred             ec----CCEEEEEeeccc
Confidence            43    247999998764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.60  E-value=0.082  Score=32.17  Aligned_cols=82  Identities=9%  Similarity=-0.050  Sum_probs=47.7

Q ss_pred             hcCCCcCCeeecCCCccceEEEEEeCCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC-CCCcceeeeEEecCCccEEEE
Q 045247           35 TNNYDEREVIKQCDFYITKLYKGFWQERLISVLKFDESLPDSVYKYSINNIVYAAQMD-HKHILKLIGCCLETPIPILVF  113 (121)
Q Consensus        35 ~~~~~~~~~ig~g~~~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~~~~~~~~~~~~~~~~lv~  113 (121)
                      ...|.+....+.+..+  .+|+....+....+|...... ......+..|...+..+. +--+.+++.........++||
T Consensus        13 ~~~~~~~~~~~G~s~~--~v~rv~~~~~~~vlk~~~~~~-~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~   89 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPA--KVYKLVGENENLYLKMTDSRY-KGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             HTTSEEEECSCCCSSS--EEEEEECSSCEEEEEEECGGG-TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             hhceEEEEcCCCCCCC--cEEEEEeCCCeEEEEEcCCCc-ccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEE
Confidence            3445444433344445  788766555566777665432 111223445555555443 334566777777778899999


Q ss_pred             eccCCC
Q 045247          114 EYGEYR  119 (121)
Q Consensus       114 e~~~~g  119 (121)
                      +++++.
T Consensus        90 ~~l~G~   95 (263)
T d1j7la_          90 SEADGV   95 (263)
T ss_dssp             ECCSSE
T ss_pred             Eecccc
Confidence            999874

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=82.62  E-value=3  Score=24.59  Aligned_cols=64  Identities=5%  Similarity=-0.114  Sum_probs=39.1

Q ss_pred             eEEEEEe-CCeEEEEEEecCCCChhHHHHHHHHHHHHHhcC--CCCcceeeeEEecCCccEEEEeccCCCC
Q 045247           53 KLYKGFW-QERLISVLKFDESLPDSVYKYSINNIVYAAQMD--HKHILKLIGCCLETPIPILVFEYGEYRT  120 (121)
Q Consensus        53 ~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~--h~~~~~~~~~~~~~~~~~lv~e~~~~g~  120 (121)
                      .||+... .+..+.+|......    ...+..|...+..+.  .-.+.+++.........+++|+++++.+
T Consensus        26 ~v~r~~~~~~~~~vlK~~~~~~----~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~   92 (255)
T d1nd4a_          26 AVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD   92 (255)
T ss_dssp             EEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred             eEEEEEeCCCCEEEEEeCCccC----HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccc
Confidence            6787776 55557777655432    112344444444333  2235566777777788999999998643