Citrus Sinensis ID: 045312

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-
MTSEMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAPPFFHPLPPPRLGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPLMNGHDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADELSKLCDDDLILRFNPTILMG
cccccEEEEEEEEEEccccccccccccccHHHcccccccEEEEEEEcccccccccHHHHHHHHHHHHHcccccccccEEEEcccccEEEEEccccEEEEEEEEcccHHHHHccccccHHHHHcccccccccccccccEEEEEEEEccccEEEEEccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccEEEcEEEEEccHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccccccccEEEEEcccccccccEEEEEEccccccccEEEEEEEccHHHHHHHHccccccccccccccc
ccccEEEEEcccEEccccccccccEEEccccccccccEEccEEEEEccccccccccHHHHHHHHHHHHHHccccccccEEEccccEEEEEccccEEEEEEEccccEHHHccccccccHHHHcccccccccccccccEEEEEEEEEccccEEEEEEEcccHccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccEEEEccHHccHHHHHcccHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccEEcccEEEEccccccccccccccccEEccccccccccEEEEEccccccccEEEEEEEccHHHHHHHHHHHHHHccccEEEEc
MTSEMITYICKRTvvstkpaqagkcnplsVFDRLMEKNHIRIVyyfpstrngepgvVTKKLRESLSHVLTcfpivtgrlqkkddghwmikCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEdmfhkpyfWATFYVQLTefeegglaigfscshlladptsaTMFVKAWADttlagtmlappffhplppprlgnknpnhnpytDLINHYkstiddrspaftnNITNYVTATLafsgpmvqacmldtsrpspfeAMAGLLWVCVSKVKGMKQGLISMSICLDMRKqlgldkgffgnclvynkvhhaeslldksELSEAARAVGESVTKMNNERIMDLIEWLehhdyefpplmnghdlicanledldpyatlfeegfVPIRVSYYVEPVFGIGQilvlqsppsegplsrmVMVTLPADelsklcdddlilrfnptilmg
MTSEMITYICKrtvvstkpaqagkCNPLSVFDRLMEKNHIRIVyyfpstrngepGVVTKKLRESLSHVLTCFPIvtgrlqkkddghWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAPPFFHPLPPPRLGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFFGNCLVYNKVHHAeslldkselSEAARAVgesvtkmnNERIMDLIEWLEHHDYEFPPLMNGHDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADElsklcdddlilRFNPTILMG
MTSEMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAppffhplpppRLGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPLMNGHDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADELSKLCDDDLILRFNPTILMG
****MITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAPPFFHPL**************YTDLINHYKSTIDDRSPAFTNNITNYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFFGNCLVYNKVHHAESLL*****************KMNNERIMDLIEWLEHHDYEFPPLMNGHDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQ*********RMVMVTLPADELSKLCDDDLILRFNPTI***
****MIT*****************CNPLSVFDRLMEKNHIRIVYYFPSTRN***GVVTKKLRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAPPFFHPLPPPRLGNKNPNHNPYTDLI*************FTNNITNYVTA*********************FEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPLMNGHDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADELSKLCDDDLILRFNPTILMG
MTSEMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAPPFFHPLPPPRLGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPLMNGHDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADELSKLCDDDLILRFNPTILMG
***EMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAPPFFHPLPPPRLGNKNPNHNPYTDLINH*****DDRSPAFTNNITNYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPLMNGHDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADELSKLCDDDLILRFNPTILMG
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MTSEMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAPPFFHPLPPPRLGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPLMNGHDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADELSKLCDDDLILRFNPTILMG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query441 2.2.26 [Sep-21-2011]
O64470451 Spermidine hydroxycinnamo no no 0.757 0.740 0.250 4e-22
Q8GSM7435 Shikimate O-hydroxycinnam N/A no 0.732 0.742 0.237 2e-17
Q70PR7421 Vinorine synthase OS=Rauv N/A no 0.383 0.401 0.312 1e-14
Q9FI78433 Shikimate O-hydroxycinnam no no 0.741 0.755 0.241 1e-13
Q94CD1457 Omega-hydroxypalmitate O- no no 0.657 0.634 0.242 2e-13
Q9FI40443 BAHD acyltransferase At5g no no 0.551 0.548 0.252 4e-12
A9ZPJ7439 Agmatine coumaroyltransfe N/A no 0.705 0.708 0.218 4e-11
A9ZPJ6439 Agmatine coumaroyltransfe N/A no 0.698 0.701 0.214 2e-10
Q8GSN8460 Malonyl-coenzyme A:anthoc N/A no 0.725 0.695 0.241 5e-10
O23918445 Anthranilate N-benzoyltra N/A no 0.621 0.615 0.241 1e-09
>sp|O64470|SHT_ARATH Spermidine hydroxycinnamoyl transferase OS=Arabidopsis thaliana GN=SHT PE=1 SV=1 Back     alignment and function desciption
 Score =  106 bits (265), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 162/363 (44%), Gaps = 29/363 (7%)

Query: 6   ITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESL 65
           IT+    T+V  +P  +G+  PL+ +D++    HI  +Y++        G V + L+ SL
Sbjct: 4   ITFRKSYTIVPAEPTWSGRF-PLAEWDQVGTITHIPTLYFYDKPSESFQGNVVEILKTSL 62

Query: 66  SHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTW 125
           S VL  F  + GRL+    G + + CN  GV  +EA ++G + +  K+ +   E   +  
Sbjct: 63  SRVLVHFYPMAGRLRWLPRGRFELNCNAEGVEFIEAESEGKLSD-FKDFSPTPEFENLMP 121

Query: 126 EDMFHKPY-FWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLA 184
           +  +  P      F  Q+T+F+ GG+++  + SH + D  SA   +  W        +  
Sbjct: 122 QVNYKNPIETIPLFLAQVTKFKCGGISLSVNVSHAIVDGQSALHLISEWGRLARGEPLET 181

Query: 185 PPFF--------HPLP----PPRLGNKNPNHNPY----TDLINHY-KSTIDDRSPAFTNN 227
            PF          PLP    PP+  +K  +  P+    TD +    K TI    P  T+ 
Sbjct: 182 VPFLDRKILWAGEPLPPFVSPPKFDHKEFDQPPFLIGETDNVEERKKKTIVVMLPLSTSQ 241

Query: 228 ITNYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMK-QGLISMSICLDM 286
           +    +     +G          +R   +E + G +W C  K +G   +   ++ IC+D 
Sbjct: 242 LQKLRSKA---NGSKHSDPAKGFTR---YETVTGHVWRCACKARGHSPEQPTALGICIDT 295

Query: 287 RKQLG--LDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWL 344
           R ++   L +G+FGN  +          L  +EL  AA  + +++  + NE +M  IE+L
Sbjct: 296 RSRMEPPLPRGYFGNATLDVVAASTSGELISNELGFAASLISKAIKNVTNEYVMIGIEYL 355

Query: 345 EHH 347
           ++ 
Sbjct: 356 KNQ 358
Hydroxycinnamoyl transferase involved in the conjugation of feruloyl CoA to spermidine. Able to perform all three conjugating steps required for the biosynthesis of N1,N5,N10-triferuloyl-spermidine. Spermidine is the only acceptor substrate while feruloyl CoA > caffeoyl CoA > coumaroyl CoA > cinnamoyl CoA >> sinapoyl CoA are efficient acyl donors. No activity with hydroxyferuloyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1 Back     alignment and function description
>sp|Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2 Back     alignment and function description
>sp|Q9FI78|HST_ARATH Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1 Back     alignment and function description
>sp|Q94CD1|HHT1_ARATH Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FI40|BAHD1_ARATH BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1 Back     alignment and function description
>sp|A9ZPJ7|AGCT2_HORVU Agmatine coumaroyltransferase-2 OS=Hordeum vulgare GN=ACT-2 PE=1 SV=1 Back     alignment and function description
>sp|A9ZPJ6|AGCT1_HORVU Agmatine coumaroyltransferase-1 OS=Hordeum vulgare GN=ACT-1 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSN8|3MAT_DAHPI Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase OS=Dahlia pinnata GN=3MAT PE=1 SV=1 Back     alignment and function description
>sp|O23918|HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 OS=Dianthus caryophyllus GN=HCBT3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query441
255546585448 transferase, putative [Ricinus communis] 0.984 0.968 0.646 1e-169
225430172449 PREDICTED: hydroxycinnamoyl-Coenzyme A s 0.975 0.957 0.604 1e-154
357436849448 Taxadien-5-alpha-ol O-acetyltransferase 0.979 0.964 0.561 1e-146
356561980440 PREDICTED: hydroxycinnamoyl-Coenzyme A s 0.970 0.972 0.588 1e-140
147864005417 hypothetical protein VITISV_032203 [Viti 0.907 0.959 0.602 1e-140
224143073399 predicted protein [Populus trichocarpa] 0.870 0.962 0.593 1e-140
18417362460 HXXXD-type acyl-transferase-like protein 0.977 0.936 0.505 1e-120
297803120453 hypothetical protein ARALYDRAFT_491831 [ 0.977 0.951 0.501 1e-120
21537270452 unknown [Arabidopsis thaliana] 0.977 0.953 0.503 1e-119
7269823414 hypothetical protein [Arabidopsis thalia 0.873 0.929 0.439 3e-93
>gi|255546585|ref|XP_002514352.1| transferase, putative [Ricinus communis] gi|223546808|gb|EEF48306.1| transferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 287/444 (64%), Positives = 337/444 (75%), Gaps = 10/444 (2%)

Query: 6   ITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESL 65
           +TYICKRTVVSTKP Q GK  PLSV  RLME+NH+RIVYYF +    E G +TKKLRESL
Sbjct: 4   VTYICKRTVVSTKPVQPGKFFPLSVLGRLMERNHLRIVYYFQTPGGREAGEITKKLRESL 63

Query: 66  SHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTW 125
           S +LTC+PIVTGRL K  DG WM+KCNDAGVR+VEAR +GSVEEWL++++R+KEL L+ W
Sbjct: 64  SELLTCYPIVTGRLLKDQDGQWMVKCNDAGVRVVEARAKGSVEEWLRSLDREKELTLIHW 123

Query: 126 EDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAP 185
           E+MFHKPYFW+TFYVQLTEFEE G AIG SC H LADPT AT+F+KAWADTT +G M++P
Sbjct: 124 EEMFHKPYFWSTFYVQLTEFEESGFAIGLSCFHPLADPTCATIFMKAWADTTFSGKMISP 183

Query: 186 PFFHPLPPPRLGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTATLAFSGPMVQA 245
           P FHPLPP R GNK PNH PYT LINHYKSTI   S         Y T  L F+ PM++A
Sbjct: 184 PLFHPLPPRRPGNKIPNHQPYTHLINHYKSTIGKTSSVTATTGHAYATVALLFTDPMIRA 243

Query: 246 CML--------DTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRKQLGLDKGFF 297
           CM         D   PSPF+A++GL W C+SKVKG + GLI MSICLDMRK LGLD GFF
Sbjct: 244 CMAMSRTTRRPDQPNPSPFQALSGLFWACISKVKGKENGLIDMSICLDMRKVLGLDHGFF 303

Query: 298 GNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPLMNG 357
           GNC+VYNKV      L   ++S A  A+ E + KM+ E IMDLIEWLE +D + PPLMNG
Sbjct: 304 GNCMVYNKVQPKS--LSNDKISSATWAIEEEMAKMDTEGIMDLIEWLESNDCQTPPLMNG 361

Query: 358 HDLICANLEDLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTL 417
            DLICANLE +DPY  +FE G  PIRVSY+VEPV G GQ+LVL SPP EG +S++VMVTL
Sbjct: 362 CDLICANLEGVDPYLAIFEGGLAPIRVSYHVEPVSGAGQVLVLPSPPGEGAMSKVVMVTL 421

Query: 418 PADELSKLCDDDLILRFNPTILMG 441
           P DE+ KLC+DDLIL F+P IL+G
Sbjct: 422 PEDEVFKLCEDDLILGFSPAILLG 445

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225430172|ref|XP_002282283.1| PREDICTED: hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase [Vitis vinifera] gi|296081974|emb|CBI20979.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357436849|ref|XP_003588700.1| Taxadien-5-alpha-ol O-acetyltransferase [Medicago truncatula] gi|355477748|gb|AES58951.1| Taxadien-5-alpha-ol O-acetyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356561980|ref|XP_003549253.1| PREDICTED: hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|147864005|emb|CAN80953.1| hypothetical protein VITISV_032203 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224143073|ref|XP_002324841.1| predicted protein [Populus trichocarpa] gi|222866275|gb|EEF03406.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18417362|ref|NP_567826.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] gi|332660207|gb|AEE85607.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803120|ref|XP_002869444.1| hypothetical protein ARALYDRAFT_491831 [Arabidopsis lyrata subsp. lyrata] gi|297315280|gb|EFH45703.1| hypothetical protein ARALYDRAFT_491831 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21537270|gb|AAM61611.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7269823|emb|CAB79683.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query441
TAIR|locus:2118299460 AT4G29250 [Arabidopsis thalian 0.977 0.936 0.487 7.2e-107
TAIR|locus:2119480428 CER26 "ECERIFERUM 26" [Arabido 0.891 0.918 0.254 2.2e-21
TAIR|locus:2076136420 CER26-LIKE "AT3G23840" [Arabid 0.675 0.709 0.249 2.3e-19
TAIR|locus:2151201353 AT5G02890 "AT5G02890" [Arabido 0.387 0.484 0.367 1.2e-18
TAIR|locus:2174423443 AT5G57840 [Arabidopsis thalian 0.911 0.907 0.252 1.5e-18
TAIR|locus:2059109451 SHT "spermidine hydroxycinnamo 0.755 0.738 0.243 4.8e-18
UNIPROTKB|A0PDV5430 cbhct1 "Hydroxycinnamoyl trans 0.879 0.902 0.252 6.9e-18
TAIR|locus:2028626444 AT1G31490 [Arabidopsis thalian 0.723 0.718 0.249 3.9e-13
TAIR|locus:2154334433 HCT "hydroxycinnamoyl-CoA shik 0.321 0.327 0.282 1.8e-12
TAIR|locus:2005499421 CER2 "ECERIFERUM 2" [Arabidops 0.385 0.403 0.288 4.6e-12
TAIR|locus:2118299 AT4G29250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
 Identities = 222/455 (48%), Positives = 303/455 (66%)

Query:     1 MTSEMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKK 60
             M  + + +ICKRTVVST+  + G+   LSV D +ME NHIR+VYY+  ++  EPG +TKK
Sbjct:     9 MEEDRVRFICKRTVVSTRSIEPGRLYQLSVLDHVMEPNHIRLVYYYRCSKTREPGEITKK 68

Query:    61 LRESLSHVLTCFPIVTGRLQKKDDG---------HWMIKCNDAGVRMVEARTQGSVEEWL 111
             LRESL++ L C+PIVTGRL K+ DG          WM+K NDAGVRMVEAR  GSV+EWL
Sbjct:    69 LRESLAYTLNCYPIVTGRLVKEVDGMEENKDLSQRWMVKSNDAGVRMVEARATGSVKEWL 128

Query:   112 KNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVK 171
             ++VNR++EL LV WEDM+H  Y+W+TF VQ+TEFE GGLAIG SCSHLLADP  A MF++
Sbjct:   129 RSVNREEELKLVHWEDMYHLQYYWSTFCVQVTEFESGGLAIGLSCSHLLADPVCAMMFIR 188

Query:   172 AWADTTLAGTMLAXXXXXXXXXXRLGNKNPNHNPYTDLINHY-KSTIDDRSPAFTNNIT- 229
             AWAD TL+ +M+A          R  N+    N    L++HY KS     SP+   N+T 
Sbjct:   189 AWADLTLSRSMMAPPLFHPLPPRRFSNQRLISN--NQLLSHYIKSCSLTASPS---NMTE 243

Query:   230 -NYVTATLAFSGPMVQACMLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLISMSICLDMRK 288
              + VT T  F  P+V+A   +  R S FE +AGL WVCVS+ KG +  L+ MS+CLD+RK
Sbjct:   244 DHMVTVTFLFPDPLVRAGE-NEPRISTFEILAGLFWVCVSRAKGKRNELMDMSLCLDVRK 302

Query:   289 QLGLDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTK-MNNERIMDLIEWLEHH 347
              L LD+ +FGNC+VY+KV +++ +  K +L   A    ES+TK ++ + +MDLIEWL  +
Sbjct:   303 LLRLDQSYFGNCMVYHKVPYSKPVKTKDKLLFHAVQEIESITKRLDYDTVMDLIEWLSSN 362

Query:   348 DYEFPPLMNGHDLICANLEDLD-PYATLFEEGFVPIRVSYYVE-PVFGIGQILVLQSPPS 405
             +     + NG DL+C NLE++      +FEE      VS YVE PV G GQ++VL SPP 
Sbjct:   363 N---GAISNGSDLVCTNLENMSHSRPMMFEEDLALSHVSCYVEGPVAGGGQVIVLPSPPG 419

Query:   406 EGPLSRMVMVTLPADELSKLCDDDLILRFNPTILM 440
             + P+SR+VMV+LP   + K+ +D+L+L F+P ++M
Sbjct:   420 KEPMSRVVMVSLPQRVMVKVIEDELLLSFSPVVIM 454
GO:0005737 "cytoplasm" evidence=ISM
GO:0016740 "transferase activity" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
TAIR|locus:2119480 CER26 "ECERIFERUM 26" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076136 CER26-LIKE "AT3G23840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151201 AT5G02890 "AT5G02890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174423 AT5G57840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059109 SHT "spermidine hydroxycinnamoyl transferase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A0PDV5 cbhct1 "Hydroxycinnamoyl transferase" [Solenostemon scutellarioides (taxid:4142)] Back     alignment and assigned GO terms
TAIR|locus:2028626 AT1G31490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154334 HCT "hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005499 CER2 "ECERIFERUM 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00032576001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (449 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query441
pfam02458432 pfam02458, Transferase, Transferase family 6e-32
PLN03157447 PLN03157, PLN03157, spermidine hydroxycinnamoyl tr 3e-29
PLN02481436 PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul 8e-18
PLN02663431 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate 2e-17
PLN00140444 PLN00140, PLN00140, alcohol acetyltransferase fami 2e-11
>gnl|CDD|217048 pfam02458, Transferase, Transferase family Back     alignment and domain information 
 Score =  125 bits (317), Expect = 6e-32
 Identities = 88/362 (24%), Positives = 151/362 (41%), Gaps = 37/362 (10%)

Query: 5   MITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIV--YYFPSTRNGEPGVVTKKLR 62
            +T   K  +  + P    + N LS  D  + +  + +   +++           ++KL+
Sbjct: 2   KVTITSKELIKPSSPTPNHRLN-LSNLD-QILQTPVYVKACFFYKKPSEFSDETPSEKLK 59

Query: 63  ESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELML 122
            SLS  L  +  + GRL +   G   I CND G   VEAR    + ++L   + D  L L
Sbjct: 60  TSLSETLVSYYPLAGRL-RSPGGRLEIDCNDEGADFVEARADVELSDFLDGEDPDDSLEL 118

Query: 123 VTWEDMFHKPYF-WATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGT 181
           +  +         W    VQ+T+F+ GG AIG S +H +AD  S + F+ +WA+    G 
Sbjct: 119 LLPDLAVSSEGENWPLLAVQVTKFKCGGFAIGCSVNHAIADGYSLSTFMNSWAELARGGK 178

Query: 182 MLAPPFFH---PLPPPRLGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTATLAF 238
             +         L P      NP    +     H++  I    P  T +    V+ +  F
Sbjct: 179 KPSVTPVFRRELLLPR-----NPPQVKFD----HHEFDIFPPEPITTLD--EVVSKSFVF 227

Query: 239 SGPMVQAC---------MLDTSRPSPFEAMAGLLWVCVSKVKGMKQGLIS-MSICLDMRK 288
               + A            +    + FE +  LLW C +K + +     + +   +++R 
Sbjct: 228 EKLSISALEKLKTKANSSSNGKPRTRFEVVTALLWRCATKARKLDPEEETVLGQAVNIRS 287

Query: 289 QLG--LDKGFFGNCL--VYNKVHHAESLLDKSELSEAARAVGESVTKM-NNERIMDLIEW 343
           +L   L  G+FGN    V  K   AE  L+ + L   A  V E+  K+ ++E +  +I+W
Sbjct: 288 RLNPPLPPGYFGNAYFSVVAKSTAAE--LESNPLGWIAELVKEAKKKVIDDEYLESVIDW 345

Query: 344 LE 345
           +E
Sbjct: 346 VE 347

This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase. Length = 432
>gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 441
PLN03157447 spermidine hydroxycinnamoyl transferase; Provision 100.0
PLN02481436 Omega-hydroxypalmitate O-feruloyl transferase 100.0
PLN02663431 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn 100.0
PF02458432 Transferase: Transferase family; InterPro: IPR0034 100.0
PLN00140444 alcohol acetyltransferase family protein; Provisio 100.0
PRK09294416 acyltransferase PapA5; Provisional 99.43
COG4908439 Uncharacterized protein containing a NRPS condensa 98.59
PF07247480 AATase: Alcohol acetyltransferase; InterPro: IPR01 98.57
TIGR02946446 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b 98.48
PF00668301 Condensation: Condensation domain; InterPro: IPR00 98.43
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 97.69
PRK12316 5163 peptide synthase; Provisional 97.42
PRK12467 3956 peptide synthase; Provisional 97.42
PRK12467 3956 peptide synthase; Provisional 97.34
PRK12316 5163 peptide synthase; Provisional 97.21
PRK05691 4334 peptide synthase; Validated 97.05
PRK05691 4334 peptide synthase; Validated 96.92
PF03007263 WES_acyltransf: Wax ester synthase-like Acyl-CoA a 96.47
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.8e-77  Score=610.04  Aligned_cols=412  Identities=22%  Similarity=0.309  Sum_probs=332.8

Q ss_pred             ccEEEEEEEEeeeCCCCCCCCcccCChhhhhccccceeEEEEeCCCCCCCchhhHHHHHHHHHHhhhcCccCCceeEecC
Q 045312            4 EMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQKKD   83 (441)
Q Consensus         4 ~~v~v~~~~~V~p~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~d~~~~~~~Lk~sL~~~L~~~p~laGrl~~~~   83 (441)
                      +-|+|+++++|+|+.|++ .+.++||.||+..++.|++.+|||+.+...+..+++++||+||+++|.+||||||||+.++
T Consensus         1 ~~v~~~~~~~v~Ps~ptp-~~~~~LS~lD~~~~~~~v~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~   79 (447)
T PLN03157          1 MVVILKASYTVKPAKPTW-TGRRSLSEWDQVGTITHVPTIYFYSPPWNTSSGSIIEILKDSLSRALVPFYPLAGRLRWIG   79 (447)
T ss_pred             CeEEEeccEEECCCCCCC-CCccCCChhhhccccccCCEEEEEeCCCccccccHHHHHHHHHHHHHhhccccCEEEEEcC
Confidence            469999999999999985 5789999999988889999999998754322235789999999999999999999999988


Q ss_pred             CCcEEEEecCCceEEEEEEccccHHHHhcccCCccccccccccccCCCCCCcceEEEEEEEEecCeEEEEEeeeeeccCH
Q 045312           84 DGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADP  163 (441)
Q Consensus        84 ~G~~~i~~~~~gv~f~~a~~~~~l~~~~~~~~~~~~~~l~p~~~~~~~~~~~P~l~vQvt~f~~GG~il~~~~~H~v~Dg  163 (441)
                      +|+++|+||++||+|+||+++++|+|+.+..+.....+|+|..+...+..+.|++++|||.|.|||++||+++||.++||
T Consensus        80 ~g~~~i~c~~~Gv~fveA~~~~~l~~~~~~~~~~~~~~l~P~~~~~~~~~~~Pll~vQvT~F~cGG~~lg~~~~H~v~Dg  159 (447)
T PLN03157         80 GGRLELECNAMGVLLIEAESEAKLDDFGDFSPTPEFEYLIPSVDYTKPIHELPLLLVQLTKFSCGGISLGLGISHAVADG  159 (447)
T ss_pred             CCcEEEEECCCCeEEEEEEeCCcHHHhhccCCCHHHHhhcCCCCcccccccCceEEEEEEEecCCCEEEEEEeeccccch
Confidence            89999999999999999999999999964322233456777433322234579999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhcCCCCCCCCCCCC-CCC-CCCCCCCCCCCCccccccccccccC--CCCCCCCCCCCceEEEEEEeC
Q 045312          164 TSATMFVKAWADTTLAGTMLAPPFFHP-LPP-PRLGNKNPNHNPYTDLINHYKSTID--DRSPAFTNNITNYVTATLAFS  239 (441)
Q Consensus       164 ~g~~~fl~~wa~~~rg~~~~~~P~~dr-~~~-~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~f~fs  239 (441)
                      .|+.+|+++||++|||.....+|++|| ++. ++++...+.. +.    ..|...+.  ...........+.+.++|+|+
T Consensus       160 ~~~~~fl~aWA~~~rg~~~~~~P~~dR~~l~~~~~p~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs  234 (447)
T PLN03157        160 QSALHFISEWARIARGEPLGTVPFLDRKVLRAGEPPLSAPVF-DH----AEFSHPPLLIGEQDNVEERKKKTTVAMLKLS  234 (447)
T ss_pred             HhHHHHHHHHHHHhcCCCCCCCCccCcccccCCCCCCcCCcc-Ch----hhcccCcccccccccccccccCceEEEEEEC
Confidence            999999999999999987667899999 443 2221111111 10    11210000  000001112346788999999


Q ss_pred             HHHHHHHHHhcC---------CCChHHHHHHHHHHHHHhhcCCC-CCeEEEEEEeccccCC--CCCCCCCCcccccccc-
Q 045312          240 GPMVQACMLDTS---------RPSPFEAMAGLLWVCVSKVKGMK-QGLISMSICLDMRKQL--GLDKGFFGNCLVYNKV-  306 (441)
Q Consensus       240 ~~~l~~Lk~~~~---------~~St~d~l~A~lW~~i~rar~~~-~~~~~l~~~vd~R~rl--~lp~~y~GN~~~~~~~-  306 (441)
                      +++|++||+++.         ++|++|+|+||+|+|++|||... ++.+.+.++||+|+|+  |+|++||||++..+.+ 
T Consensus       235 ~~~i~~LK~~a~~~~~~~~~~~~St~dalsA~lWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~  314 (447)
T PLN03157        235 KDQVEKLKDKANESRSSDNGRPYTRYETVAGHVWRSACKARGHEPEQPTALGICVDSRSRMQPPLPDGYFGNATLDVIAE  314 (447)
T ss_pred             HHHHHHHHHhCcccccccCCCCccHHHHHHHHHHHHHHHHccCCCCCceEEEEEecCCCCCCCCCCCCcccceeeeccch
Confidence            999999999863         48999999999999999999765 7889999999999999  6999999999998877 


Q ss_pred             cccccccCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCC-----------c-ccCCceEEEecCCCCCcccc
Q 045312          307 HHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPP-----------L-MNGHDLICANLEDLDPYATL  374 (441)
Q Consensus       307 ~~~~~l~~~~~l~~~A~~Ir~~i~~~~~~~i~~~~~~~~~~~~~~~~-----------~-~~~~~~~~tsw~~~~~y~~D  374 (441)
                      .+.+++.+.+ |+.+|.+||++++++++++++++++|++..++...+           . ...+++.+|||.++++|++|
T Consensus       315 ~~~~el~~~~-l~~~a~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~D  393 (447)
T PLN03157        315 STSGELVSKP-LGYASSKIREAIEKVTNEYVQSAIDYLKNQEDLTRFQDLHALGGAEGPFYGNPNLGVVSWLTLPIYGLD  393 (447)
T ss_pred             hhHHHHhhCC-HHHHHHHHHHHHHHhHHHHHHHHHHHHhhCccchhhhcccccccccccccCCCceEEeecccCCccccc
Confidence            7789998885 999999999999999999999999999876542111           0 12357999999999999999


Q ss_pred             cCCCCCcceEEeeecccccCcEEEEeecCCCCCCCeEEEEEEcCHHHHHhhhc
Q 045312          375 FEEGFVPIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADELSKLCD  427 (441)
Q Consensus       375 FG~G~~P~~v~~~~~~~~~~g~~~ilp~~~~~g~~~~~v~v~L~~~~m~~L~~  427 (441)
                      |||| +|.++++.  ....+|.++++|++  +|++||+|.|+|++++|++|++
T Consensus       394 FGwG-kp~~~~p~--~~~~~g~~~l~~~~--~~~g~iev~v~L~~~~M~~f~~  441 (447)
T PLN03157        394 FGWG-KEIYMGPG--THDFDGDSLLLPGQ--NEDGSVILALCLQVAHMEAFKK  441 (447)
T ss_pred             cCCC-ccceeccc--ccCCCceEEEeecC--CCCCcEEEEEEcCHHHHHHHHH
Confidence            9999 99988752  22368999999998  4455899999999999999975

>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes Back     alignment and domain information
>PLN00140 alcohol acetyltransferase family protein; Provisional Back     alignment and domain information
>PRK09294 acyltransferase PapA5; Provisional Back     alignment and domain information
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] Back     alignment and domain information
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 Back     alignment and domain information
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT Back     alignment and domain information
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query441
4g0b_A436 Structure Of Native Hct From Coffea Canephora Lengt 9e-18
4g22_A439 Structure Of A Lys-Hct Mutant From Coffea Canephora 4e-17
4g2m_A439 Structure Of A Lys-Hct Mutant From Coffea Canephora 8e-17
2bgh_A421 Crystal Structure Of Vinorine Synthase Length = 421 4e-15
2e1v_A454 Crystal Structure Of Dendranthema Morifolium Dmat, 7e-06
2e1t_A454 Crystal Structure Of Dendranthema Morifolium Dmat C 9e-06
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 Back     alignment and structure 
Iteration: 1

 Score = 88.2 bits (217), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 153/363 (42%), Gaps = 22/363 (6%)
Query: 18  KPAQAGKCNPL--SVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIV 75
           +PAQ      L  S  D ++   H   VY++  T +       K L+++LS  L  F  +
Sbjct: 14  RPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSN-FFDAKVLKDALSRALVPFYPM 72
Query: 76  TGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFW 135
            GRL++ +DG   I+CN  GV  VEA + G V+++       +   L+   D       +
Sbjct: 73  AGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGISSY 132
Query: 136 ATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAGTMLAXXXXXXXXXXR 195
           A   +Q+T F+ GG+++G    H  AD  S   F+ +W+D       L            
Sbjct: 133 ALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARG---LDVTLPPFIDRTL 189
Query: 196 LGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTATLAFSGPMVQACML------- 248
           L  ++P   P    I +        SP    + +   TA   F     Q   L       
Sbjct: 190 LRARDPPQ-PQFQHIEYQPPPALKVSPQTAKSDSVPETAVSIFKLTREQISALKAKSKED 248
Query: 249 -DTSRPSPFEAMAGLLWVCVSKVKGMK--QGLISMSICLDMRKQL--GLDKGFFGNCLVY 303
            +T   S +E +AG +W C  K +G++  QG   + I  D R +L   L  G+FGN +  
Sbjct: 249 GNTISYSSYEMLAGHVWRCACKARGLEVDQG-TKLYIATDGRARLRPSLPPGYFGNVIFT 307
Query: 304 NKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPLMNG-HDLIC 362
                    L+   +  AA  + +++ +M+N+ +   +++LE    +   L+ G H   C
Sbjct: 308 ATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQP-DLKALVRGAHTFKC 366
Query: 363 ANL 365
            NL
Sbjct: 367 PNL 369
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 Back     alignment and structure
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 Back     alignment and structure
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 Back     alignment and structure
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 Back     alignment and structure
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query441
4g22_A439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 3e-75
2bgh_A421 Vinorine synthase; VS, BAHD, acetyltransferase, au 2e-62
2e1v_A454 Acyl transferase; BAHD superfamily, seleno-methion 5e-51
2rkv_A451 Trichothecene 3-O-acetyltransferase; BAHD superfam 4e-49
2xr7_A453 Malonyltransferase; xenobiotics, naphthols; HET: M 3e-46
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 Back     alignment and structure
 Score =  241 bits (616), Expect = 3e-75
 Identities = 102/450 (22%), Positives = 178/450 (39%), Gaps = 36/450 (8%)

Query: 1   MTSEMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKK 60
           M S  I  + + T+V       G+    S  D ++   H   VY++  T         K 
Sbjct: 3   MGSMKIE-VKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPT-GSSNFFDAKV 60

Query: 61  LRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKEL 120
           L+++LS  L  F  + GRL++ +DG   I+CN  GV  VEA + G V+++       +  
Sbjct: 61  LKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELR 120

Query: 121 MLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTLAG 180
            L+   D       +A   +Q+T F+ GG+++G    H  AD  S   F+ +W+D     
Sbjct: 121 RLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGL 180

Query: 181 TMLAPPFFH-----PLPPPRLGNKNPNHNPYTDLINHYKSTIDDRSPAFTNNITNYVTAT 235
            +  PPF          PP+   ++  + P   L    ++   D  P           + 
Sbjct: 181 DVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVP-------ETAVSI 233

Query: 236 LAFSGPMVQACM------LDTSRPSPFEAMAGLLWVCVSKVKGMKQGLIS-MSICLDMRK 288
              +   + A         +T   S +E +AG +W C  K +G++    + + I  D R 
Sbjct: 234 FKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRA 293

Query: 289 QLG--LDKGFFGNCLVYNKVHHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEH 346
           +L   L  G+FGN +           L+   +  AA  + +++ +M+N+ +   +++LE 
Sbjct: 294 RLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLEL 353

Query: 347 HDYEFPPLMNGHDLICANLE-----DLDPYATLFEEGFVPIRVSYYVEPVFGIGQILVLQ 401
                  +   H   C NL       L  +   F  G  PI +      +   G   +L 
Sbjct: 354 QPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWG-RPIFMG--PGGIAYEGLSFILP 410

Query: 402 SPPSEGPLSRMVMVTLPA---DELSKLCDD 428
           SP ++G  S  V ++L             D
Sbjct: 411 SPTNDG--SMSVAISLQGEHMKLFQSFLYD 438
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query441
4g22_A439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 100.0
2bgh_A421 Vinorine synthase; VS, BAHD, acetyltransferase, au 100.0
2xr7_A453 Malonyltransferase; xenobiotics, naphthols; HET: M 100.0
2e1v_A454 Acyl transferase; BAHD superfamily, seleno-methion 100.0
2rkv_A451 Trichothecene 3-O-acetyltransferase; BAHD superfam 100.0
1q9j_A422 PAPA5, polyketide synthase associated protein 5; c 99.06
4hvm_A493 Tlmii; PSI-biology, midwest center for structural 98.76
2jgp_A520 Tyrocidine synthetase 3; multifunctional enzyme, a 98.7
2xhg_A466 Tyrocidine synthetase A; isomerase, nonribosomal p 98.4
1l5a_A436 Amide synthase, VIBH; nonribosomal peptide synthet 98.33
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 98.07
3fot_A519 15-O-acetyltransferase; fusarium head blight, tric 97.57
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Back     alignment and structure
Probab=100.00  E-value=3.6e-79  Score=622.48  Aligned_cols=412  Identities=23%  Similarity=0.304  Sum_probs=336.8

Q ss_pred             CCcccEEEEEEEEeeeCCCCCCCCcccCChhhhhccccceeEEEEeCCCCCCCchhhHHHHHHHHHHhhhcCccCCceeE
Q 045312            1 MTSEMITYICKRTVVSTKPAQAGKCNPLSVFDRLMEKNHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQ   80 (441)
Q Consensus         1 ~~~~~v~v~~~~~V~p~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~d~~~~~~~Lk~sL~~~L~~~p~laGrl~   80 (441)
                      |.+++|+|+++++|+|+.|+ |.+.++||+||+.+++.|++.+|||+.++. +....+++||+||+++|++||||||||+
T Consensus         3 m~~~~V~i~~~~~V~P~~~t-p~~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGRl~   80 (439)
T 4g22_A            3 MGSMKIEVKESTMVRPAQET-PGRNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGRLK   80 (439)
T ss_dssp             ---CCEEEEEEEEECCSSCC-CCCEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCEEE
T ss_pred             CCceEEEEeeeEEEeCCCCC-CCCeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhccccceeee
Confidence            67889999999999999997 468899999999988899999999997543 3345689999999999999999999999


Q ss_pred             ecCCCcEEEEecCCceEEEEEEccccHHHHhcccCCccccccccccccCCCCCCcceEEEEEEEEecCeEEEEEeeeeec
Q 045312           81 KKDDGHWMIKCNDAGVRMVEARTQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLL  160 (441)
Q Consensus        81 ~~~~G~~~i~~~~~gv~f~~a~~~~~l~~~~~~~~~~~~~~l~p~~~~~~~~~~~P~l~vQvt~f~~GG~il~~~~~H~v  160 (441)
                      .+++|+++|+||++||+|+|++++.+++|+.+........+|+|..+...+..+.|++.+|||+|+|||++||+++||.+
T Consensus        81 ~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v  160 (439)
T 4g22_A           81 RDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHA  160 (439)
T ss_dssp             ECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTT
T ss_pred             eCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeecc
Confidence            99889999999999999999999999999864222223456766544433345689999999999999999999999999


Q ss_pred             cCHhhHHHHHHHHHHHhcCCCCCCCCCCCC-CCCC-CCCCCCCCCCCccccccccccccCCCCCCCC--CCC-CceEEEE
Q 045312          161 ADPTSATMFVKAWADTTLAGTMLAPPFFHP-LPPP-RLGNKNPNHNPYTDLINHYKSTIDDRSPAFT--NNI-TNYVTAT  235 (441)
Q Consensus       161 ~Dg~g~~~fl~~wa~~~rg~~~~~~P~~dr-~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~  235 (441)
                      +||.|+.+|+++||++|||...+.+|++|| ++.. .++.  +. .++    .+|.+....+.....  ... .+++.++
T Consensus       161 ~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~--~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (439)
T 4g22_A          161 ADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQ--PQ-FQH----IEYQPPPALAVSPQTAASDSVPETAVSI  233 (439)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCC--CS-SCC----GGGSCCC---------------CEEEEE
T ss_pred             CcHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCC--CC-cCc----ccccCCCCCcccccccccCCcccceEEE
Confidence            999999999999999999987667899999 5433 2211  11 111    123322111110000  112 5789999


Q ss_pred             EEeCHHHHHHHHHhcC------CCChHHHHHHHHHHHHHhhcCCC-CCeEEEEEEeccccCC--CCCCCCCCcccccccc
Q 045312          236 LAFSGPMVQACMLDTS------RPSPFEAMAGLLWVCVSKVKGMK-QGLISMSICLDMRKQL--GLDKGFFGNCLVYNKV  306 (441)
Q Consensus       236 f~fs~~~l~~Lk~~~~------~~St~d~l~A~lW~~i~rar~~~-~~~~~l~~~vd~R~rl--~lp~~y~GN~~~~~~~  306 (441)
                      |+|++++|++||+.+.      ++|++|+|+||+|+|++|||..+ ++.+.+.++||+|+|+  |+|++||||++..+.+
T Consensus       234 f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~  313 (439)
T 4g22_A          234 FKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATP  313 (439)
T ss_dssp             EEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECC
T ss_pred             EEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhc
Confidence            9999999999999873      69999999999999999999876 7889999999999999  6999999999998888


Q ss_pred             -cccccccCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCc-----ccCCceEEEecCCCCCcccccCCCCC
Q 045312          307 -HHAESLLDKSELSEAARAVGESVTKMNNERIMDLIEWLEHHDYEFPPL-----MNGHDLICANLEDLDPYATLFEEGFV  380 (441)
Q Consensus       307 -~~~~~l~~~~~l~~~A~~Ir~~i~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~tsw~~~~~y~~DFG~G~~  380 (441)
                       .+++||.+.+ |+++|.+||+++++++++++++.++|++..++...+.     +.+.++.+|||.++++|++||||| +
T Consensus       314 ~~~~~el~~~~-L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwG-k  391 (439)
T 4g22_A          314 IAIAGDLEFKP-VWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWG-R  391 (439)
T ss_dssp             EEEHHHHHHSC-HHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSC-C
T ss_pred             ceEHHHHhhCc-HHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCC-C
Confidence             8899999886 9999999999999999999999999998776533221     225679999999999999999999 9


Q ss_pred             cceEEeeecccccCcEEEEeecCCCCCCCeEEEEEEcCHHHHHhhhc
Q 045312          381 PIRVSYYVEPVFGIGQILVLQSPPSEGPLSRMVMVTLPADELSKLCD  427 (441)
Q Consensus       381 P~~v~~~~~~~~~~g~~~ilp~~~~~g~~~~~v~v~L~~~~m~~L~~  427 (441)
                      |+++++.  ....+|.++++|++  +|++|++|.|+|++++|++|++
T Consensus       392 P~~~~~~--~~~~~g~~~~~p~~--~~~ggi~v~v~L~~~~m~~f~~  434 (439)
T 4g22_A          392 PIFMGPG--GIAYEGLSFILPSP--TNDGSMSVAISLQGEHMKLFQS  434 (439)
T ss_dssp             CSEEEES--SCCSTTEEEEEECT--TCSSCEEEEEEEEHHHHHHHHH
T ss_pred             cceeecc--ccCCCcEEEEeecC--CCCCcEEEEEECCHHHHHHHHH
Confidence            9999852  23468999999997  4456899999999999999986
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query441
d1q9ja1175 Polyketide synthase associated protein 5, PapA5 {M 98.11
d1l5aa1174 VibH {Vibrio cholerae [TaxId: 666]} 97.81
d1q9ja2238 Polyketide synthase associated protein 5, PapA5 {M 96.52
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.11  E-value=1.7e-05  Score=67.03  Aligned_cols=134  Identities=14%  Similarity=0.184  Sum_probs=81.6

Q ss_pred             ccCChhhhhccc--cceeEEEEeCCCCCCCchhhHHHHHHHHHHhhhcCccCCceeEecCCCcEEEEecCCc-eEEEEEE
Q 045312           26 NPLSVFDRLMEK--NHIRIVYYFPSTRNGEPGVVTKKLRESLSHVLTCFPIVTGRLQKKDDGHWMIKCNDAG-VRMVEAR  102 (441)
Q Consensus        26 ~~LS~lD~~~~~--~y~~~~~~f~~~~~~d~~~~~~~Lk~sL~~~L~~~p~laGrl~~~~~G~~~i~~~~~g-v~f~~a~  102 (441)
                      -+|+..++....  .++...+-++  ...|    .+.|++++..++..+|.|-.+++.+.+|.+.......- ......+
T Consensus         8 r~l~~~e~~~~~~~~~~~~~~~l~--g~ld----~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~~~~~~~~~~~~~~~~d   81 (175)
T d1q9ja1           8 RKLSHSEEVFAQYEVFTSMTIQLR--GVID----VDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVID   81 (175)
T ss_dssp             EECCHHHHHHHHTTCEEEEEEEEE--SCCC----HHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEEEC
T ss_pred             HHhCHHhhhcccCceEEEEEEEEc--CCCC----HHHHHHHHHHHHHhchhheEEEEEeCCeeEEEEECCCCCccEEEEE
Confidence            348888887643  3444444444  4457    99999999999999999999999886665544332211 1111111


Q ss_pred             ccccHHHHhcccCCccccccccccccCCCCCCcceEEEEEEEEecCeEEEEEeeeeeccCHhhHHHHHHHHHHHhc
Q 045312          103 TQGSVEEWLKNVNRDKELMLVTWEDMFHKPYFWATFYVQLTEFEEGGLAIGFSCSHLLADPTSATMFVKAWADTTL  178 (441)
Q Consensus       103 ~~~~l~~~~~~~~~~~~~~l~p~~~~~~~~~~~P~l~vQvt~f~~GG~il~~~~~H~v~Dg~g~~~fl~~wa~~~r  178 (441)
                      .+  -.+..      ......+   +. -..+.|+..+.+. ..+++..|.+.+||.++||.|+..|++.+.+.+.
T Consensus        82 ~~--~~~~~------~~~~~~~---~~-l~~~~~l~~~~i~-~~~~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~  144 (175)
T d1q9ja1          82 GT--AATNG------SPSGNAE---LR-LDQSVSLLHLQLI-LREGGAELTLYLHHCMADGHHGAVLVDELFSRYT  144 (175)
T ss_dssp             --------------------CC---CC-CCTTTCSEEEEEE-CCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred             cc--cchhH------HHHhhcc---cC-ccCCCCeEEEEEE-ecCCeEEEEEEccccccCHhHHHHHHHHHHHHHH
Confidence            10  00000      0000001   00 0123455566655 3456788899999999999999999999988775
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure