Citrus Sinensis ID: 045327


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160--
KHFFTKALPAKGMGSNIEENAAHQRKYKGIRRRKWGKWVSEIRVPGSQERLWLGSYATPEAAAMAHDVAFYCLRRPRSLDGLNFPSMLPASVVHAELSPKSVQKAASDAGMGVDAQMVLNKDKTDEMKMKMKIVERRKCLMRSSFGNMITSLKIVGHRKRES
cccccccccccccccccccccccccccccEEEcccccEEEEEEccccccEEEccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHccccccHHHccccccHHHHHHHHHHHHcHHHHccccccccccccccccccccc
**************************YKGIRRRKWGKWVSEIRVPGSQERLWLGSYATPEAAAMAHDVAFYCLRRPRSLDGLNFPSML**************************************************************************
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KHFFTKALPAKGMGSNIEENAAHQRKYKGIRRRKWGKWVSEIRVPGSQERLWLGSYATPEAAAMAHDVAFYCLRRPRSLDGLNFPSMLPASVVHAELSPKSVQKAASDAGMGVDAQMVLNKDKTDEMKMKMKIVERRKCLMRSSFGNMITSLKIVGHRKRES

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ethylene-responsive transcription factor ERF020 Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.probableQ9C9I8

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GCC, chain A
Confidence level:very confident
Coverage over the Query: 25-88
View the alignment between query and template
View the model in PyMOL