Citrus Sinensis ID: 045376

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
Protein Sequence
MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDLWRHSIAS
Secondary Structure (PSIPRED)
ccccccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEEccccEEcHHHHHHHHHcccccccEEEEEcccccccccccccEEEccccccccccccccccccccEEEEcHHHHHHHHHHcccccccccccHHHHHHHHccccEEEcccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHcccccccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEEccccccHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccEEcHHHHHHHHHHHcccccEEEEEEccccEEEcccccEcccHHHHHccccccccccccccEEEEcHHHHHHHHHHHHHHHHHcccccEEHHHHccccEEEccccccccccccccccccccccEEEEEEEcccccccccHHHHHHHHHHcccccccEEEcccccccccc
Coil and Loop (DISEMBL)
MEKEKGIVIRFVIghsakpggvldkgidaedaehQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALAnhkskpriyigcmksgpvlyqkgmkyhepeywkfgeegnnyfmHATGQIYAISKDLAAYisfnspilhtyanedvslgswfigldvehvddrsmccgtppdcewkakegsvcvasfdwpcsgiCNAVERMKEVHNscgerdgavwnvDLWRHSIAS
Flexible Loop (DISEMBL)
MEKEKGIVIRfvighsakpggVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALanhkskpriyIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNscgerdgavwnvdlwrhsias
Low Complexity Region (SEG)
MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDLWRHSIAS
Disordered region (IsUnstruct)
*****GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDLWRH****
Disordered Region (DISOPRED)
***EKGIVIRFVIGHSAKPG**LDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDLWRHS***
Disordered Region (DISEMBL)
MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDLWRHSIAS
Disordered Region (DISPRO)
****KGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDLWR*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDLWRHSIAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	244	2.2.26 [Sep-21-2011]
Q9MAP8	399	Probable beta-1,3-galacto	no	no	0.959	0.586	0.739	1e-106
Q9C809	395	Probable beta-1,3-galacto	no	no	0.954	0.589	0.729	1e-105
A8MRC7	407	Probable beta-1,3-galacto	no	no	0.963	0.577	0.702	1e-105
Q6NQB7	393	Beta-1,3-galactosyltransf	yes	no	0.971	0.603	0.716	1e-105
Q9ZV71	409	Probable beta-1,3-galacto	no	no	0.938	0.559	0.698	1e-101
Q8LEJ9	407	Probable beta-1,3-galacto	no	no	0.926	0.555	0.696	2e-98
Q9LM60	398	Probable beta-1,3-galacto	no	no	0.950	0.582	0.676	4e-98
Q9SAA4	384	Probable beta-1,3-galacto	no	no	0.954	0.606	0.682	5e-96
Q94F27	338	Probable beta-1,3-galacto	no	no	0.75	0.541	0.491	1e-48
Q94A05	345	Probable beta-1,3-galacto	no	no	0.75	0.530	0.464	1e-45

>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1

 Score =  385 bits (990), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/234 (73%), Positives = 200/234 (85%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +E EKGI++RFVIGHS+ PGGVLD  I+AE+ +H+DF RLN IEGY +LS+KT+ YFS+A
Sbjct: 163 LETEKGIIMRFVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSA 222

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            + WDA+FYIKVDDDVHVNLG L + LA H+SKPR+YIGCMKSGPVL QKG+KYHEPEYW
Sbjct: 223 VAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYW 282

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAISKDLA YIS N  +LH YANEDVSLGSWFIGLDVEH+DDR
Sbjct: 283 KFGEEGNKYFRHATGQIYAISKDLATYISVNRQLLHKYANEDVSLGSWFIGLDVEHIDDR 342

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWN 234
           S+CCGTP DCEWK + G+ C ASFDW CSGIC +V+RM EVH  CGE DGA+W+
Sbjct: 343 SLCCGTPLDCEWKGQAGNPCAASFDWSCSGICKSVDRMLEVHQRCGEGDGAIWH 396

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1

 Score =  381 bits (978), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 170/233 (72%), Positives = 197/233 (84%)

Query: 6   GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWD 65
           GIV+RFVIGHSA PGGVLDK ID ED+EH+DFLRL  IEGY +LSTKT+ YFSTA +++D
Sbjct: 162 GIVVRFVIGHSATPGGVLDKAIDEEDSEHKDFLRLKHIEGYHQLSTKTRLYFSTATAMYD 221

Query: 66  AEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEE 125
           AEFY+KVDDDVHVNLG L+  LA ++S+PRIYIGCMKSGPVL QKG+KYHEPE+WKFGEE
Sbjct: 222 AEFYVKVDDDVHVNLGMLVTTLARYQSRPRIYIGCMKSGPVLSQKGVKYHEPEFWKFGEE 281

Query: 126 GNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCG 185
           GN YF HATGQIYAISKDLA YIS N  ILH YANEDVSLG+W +GL+VEHVD+RSMCCG
Sbjct: 282 GNKYFRHATGQIYAISKDLATYISTNQGILHRYANEDVSLGAWMLGLEVEHVDERSMCCG 341

Query: 186 TPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDLW 238
           TPPDC+WKA+ G+VC ASFDW CSGIC +V+RM  VH +C E D  + N   +
Sbjct: 342 TPPDCQWKAQAGNVCAASFDWSCSGICKSVDRMARVHRACAEGDTPLANFRFF 394

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1

 Score =  381 bits (978), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 165/235 (70%), Positives = 201/235 (85%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +E+EKGI+IRFVIGHSA  GG+LD+ I+AED +H DFLRL+ +EGY +LS KTKTYFSTA
Sbjct: 171 LEEEKGIIIRFVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTA 230

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
           FS+WDA+FY+KVDDDVHVN+  L   L  H+ KPR+YIGCMKSGPVL QKG++YHEPEYW
Sbjct: 231 FSMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYW 290

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGE GN YF HATGQ+YAIS+DLA+YIS N  +LH YANEDVSLG+WFIG+DV+H+DDR
Sbjct: 291 KFGENGNKYFRHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDR 350

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNV 235
            +CCGTPPDCEWKA+ G++CVASFDW CSGIC + +R+KEVH  CGE + A+W+ 
Sbjct: 351 RLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSA 405

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 174/243 (71%), Positives = 200/243 (82%), Gaps = 6/243 (2%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +E+EKGIVI+F+IGHSA    +LD+ ID+EDA+H+DFLRL  +EGY +LS KTK +FSTA
Sbjct: 151 LEQEKGIVIKFMIGHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTA 210

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQ------KGMKY 114
            + WDAEFYIKVDDDVHVNLG L + LA H+SKPR+YIGCMKSGPVL Q      + +KY
Sbjct: 211 VAKWDAEFYIKVDDDVHVNLGMLASTLARHRSKPRVYIGCMKSGPVLAQNLLNCFRTVKY 270

Query: 115 HEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDV 174
           HEPEYWKFGE+GN YF HATGQIYAISKDLA YIS N PILH YANEDVSLGSWFIGL+V
Sbjct: 271 HEPEYWKFGEDGNKYFRHATGQIYAISKDLANYISINQPILHKYANEDVSLGSWFIGLEV 330

Query: 175 EHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWN 234
           EH+DDR+ CCGTPPDC WKA+ G VCVASF+W CSGIC +VERMK VH  C E +GAVWN
Sbjct: 331 EHIDDRNFCCGTPPDCRWKAEAGDVCVASFEWSCSGICKSVERMKIVHEVCSEGEGAVWN 390

Query: 235 VDL 237
             L
Sbjct: 391 TLL 393

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1

 Score =  366 bits (939), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 160/229 (69%), Positives = 191/229 (83%)

Query: 6   GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWD 65
           GI+IRFVIGHSA  GG+LD+ I+AED +H DFLRL+ +EGY +LS KTKTYFSTA S WD
Sbjct: 178 GIIIRFVIGHSATAGGILDRSIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTAVSKWD 237

Query: 66  AEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEE 125
           AEFY+KVDDDVHVN+  L   L  H+ K R+Y+GCMKSGPVL QKG++YHEPEYWKFGE 
Sbjct: 238 AEFYVKVDDDVHVNIATLGETLVRHRKKHRVYLGCMKSGPVLSQKGVRYHEPEYWKFGEN 297

Query: 126 GNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCG 185
           GN YF HATGQ+YAIS+DLA+YIS N  +LH YANEDV+LG+WFIGLDV H+DDR +CCG
Sbjct: 298 GNKYFRHATGQLYAISRDLASYISLNQHVLHKYANEDVTLGAWFIGLDVTHIDDRRLCCG 357

Query: 186 TPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWN 234
           TPPDCEWKA+ G++CVASFDW CSGIC + +R+KEVH  CGE + A+W 
Sbjct: 358 TPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHKRCGEPENAIWK 406

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1

 Score =  358 bits (919), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 158/227 (69%), Positives = 194/227 (85%), Gaps = 1/227 (0%)

Query: 6   GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWD 65
           GIV+RFVIGHS+ PGG+LD+ I AE+++H DFLRL+ +EGY +LS KTKTYF+TAF++WD
Sbjct: 177 GIVMRFVIGHSSTPGGILDRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTAFAMWD 236

Query: 66  AEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEE 125
           A+FY+KVDDDVHVN+  L   LA ++ KPR+YIGCMKSGPVL QKG++YHEPEYWKFGEE
Sbjct: 237 ADFYVKVDDDVHVNIATLGAELARYRMKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEE 296

Query: 126 GNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCG 185
           GN YF HATGQ+YAIS++LA+YIS N  +LH Y NEDVSLGSWF+GLDVEHVDDR +CCG
Sbjct: 297 GNKYFRHATGQLYAISRELASYISINQNVLHKYVNEDVSLGSWFLGLDVEHVDDRRLCCG 356

Query: 186 TPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAV 232
           T  DCEWKA+ G++CVASFDW CSGIC + +RMK+VH  CGE + A+
Sbjct: 357 T-TDCEWKAQAGNICVASFDWSCSGICRSADRMKDVHRRCGEGEKAL 402

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1

 Score =  357 bits (916), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 157/232 (67%), Positives = 192/232 (82%)

Query: 6   GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWD 65
           GIV++F+IGHS+ P  +LDK ID+EDA++ DF RL+ +EGY  LS KTK++FS+A + WD
Sbjct: 164 GIVVKFMIGHSSTPNSMLDKEIDSEDAQYNDFFRLDHVEGYYNLSAKTKSFFSSAVAKWD 223

Query: 66  AEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEE 125
           AEFY+K+DDDVHVNLG L + LA+H+SKPR+YIGCMKSGPVL +K  KY EPE+WKFGEE
Sbjct: 224 AEFYVKIDDDVHVNLGTLASTLASHRSKPRVYIGCMKSGPVLTKKTAKYREPEFWKFGEE 283

Query: 126 GNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRSMCCG 185
           GN YF HATGQIYAISKDLA YIS N PILH YANEDV+LGSWFIGL+VE +DDR+ CCG
Sbjct: 284 GNKYFRHATGQIYAISKDLATYISNNQPILHKYANEDVTLGSWFIGLEVEQIDDRNFCCG 343

Query: 186 TPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
           TPPDCE +A+ G +CVA+FDW CSG+C +V+RM  VH  CGE   AVW+ +L
Sbjct: 344 TPPDCEMRAEAGEMCVATFDWKCSGVCRSVDRMWMVHVMCGEGSKAVWDANL 395

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2

 Score =  350 bits (898), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 159/233 (68%), Positives = 185/233 (79%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +E+EKGI++RFVIGHS    G+LDK I+AE+  H DFLRL   EGY KLS KTKT+F+TA
Sbjct: 148 LEEEKGIIVRFVIGHSVLSHGILDKAIEAEEKTHGDFLRLEHTEGYMKLSAKTKTFFATA 207

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            S+WDAEFYIKVDDDVHVNL +L  AL+ H++KPR+Y+GCMKSGPVL +K +KYHEPEYW
Sbjct: 208 VSLWDAEFYIKVDDDVHVNLASLKKALSAHQNKPRVYVGCMKSGPVLARKSVKYHEPEYW 267

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGE GN YF HATGQ YAISKDLA YI  N  +LH YANEDVSLGSWFIGL+VEHVD++
Sbjct: 268 KFGEVGNKYFRHATGQFYAISKDLATYILINQDLLHKYANEDVSLGSWFIGLNVEHVDEK 327

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVW 233
            +CC T  DCE KA  G VC ASFDW CSGIC + ERM +VH  CGE   A+W
Sbjct: 328 RLCCSTSQDCELKAMMGHVCAASFDWKCSGICRSAERMADVHERCGEPQNALW 380

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1

 Score =  192 bits (489), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/185 (49%), Positives = 128/185 (69%), Gaps = 2/185 (1%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLN-LIEGYKKLSTKTKTYFST 59
           +E EKG++ RFVIG SA  G  +DK ID E+++  DF+ L+ ++E  ++ S K K +F+ 
Sbjct: 143 LESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEAPEEASKKVKLFFAY 202

Query: 60  AFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEY 119
           A   WDA+FY K  D+++VN+ AL   LA H   PR YIGCMKSG V  +   K++EPE+
Sbjct: 203 AADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGEVFSEPNHKWYEPEW 262

Query: 120 WKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDD 179
           WKFG++   YF HA G++Y I+  LA ++S N  ILH+YA++DVS GSWF+GLDV+HVD+
Sbjct: 263 WKFGDK-KAYFRHAYGEMYVITHALARFVSINRDILHSYAHDDVSTGSWFVGLDVKHVDE 321

Query: 180 RSMCC 184
              CC
Sbjct: 322 GKFCC 326

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q94A05|B3GTA_ARATH Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1

 Score =  183 bits (464), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 129/185 (69%), Gaps = 2/185 (1%)

Query: 3   KEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRL-NLIEGYKKLSTKTKTYFSTAF 61
           +E+G+VIRFVIG SA  G  LD+ ID E+   +DFL L N  E  ++L  K K ++S A 
Sbjct: 152 EERGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEEAQEELPKKVKFFYSAAV 211

Query: 62  SIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWK 121
             WDAEFY+KVDD+V ++L  ++  L + +S+   YIGCMKSG V+ ++G +++EPE+WK
Sbjct: 212 QNWDAEFYVKVDDNVDLDLEGMIALLESRRSQDGAYIGCMKSGDVITEEGSQWYEPEWWK 271

Query: 122 FGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRS 181
           FG++  +YF HATG +  +SK+LA Y++ NS +L TYA +D ++GSW IG+   ++DD  
Sbjct: 272 FGDD-KSYFRHATGSLVILSKNLAQYVNINSGLLKTYAFDDTTIGSWMIGVQATYIDDNR 330

Query: 182 MCCGT 186
           +CC +
Sbjct: 331 LCCSS 335

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
255544900	436	transferase, transferring glycosyl group	0.971	0.543	0.776	1e-112
297734745	390	unnamed protein product [Vitis vinifera]	0.971	0.607	0.767	1e-111
359493578	431	PREDICTED: probable beta-1,3-galactosylt	0.971	0.549	0.767	1e-111
294464535	335	unknown [Picea sitchensis]	0.963	0.701	0.774	1e-111
356544244	378	PREDICTED: probable beta-1,3-galactosylt	0.971	0.626	0.763	1e-111
356529903	378	PREDICTED: probable beta-1,3-galactosylt	0.971	0.626	0.755	1e-111
294460682	246	unknown [Picea sitchensis]	0.963	0.955	0.774	1e-110
255555799	403	Beta-1,3-galactosyltransferase sqv-2, pu	0.971	0.588	0.755	1e-109
168059711	371	predicted protein [Physcomitrella patens	0.959	0.630	0.756	1e-109
168003732	391	predicted protein [Physcomitrella patens	0.971	0.606	0.746	1e-108

>gi|255544900|ref|XP_002513511.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223547419|gb|EEF48914.1| transferase, transferring glycosyl groups, putative [Ricinus communis]

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 184/237 (77%), Positives = 210/237 (88%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +EKEKGIVIRFVIGHSA PGGVLDK +D E+AEH+DFLRL  +EGY +LSTKT+ YFSTA
Sbjct: 200 LEKEKGIVIRFVIGHSATPGGVLDKALDLEEAEHKDFLRLKHVEGYHELSTKTRLYFSTA 259

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            SIWDAEFY+KVDDD+H+NLG L++ LA ++SK R+YIGCMKSGPVL +KG+KYHEPEYW
Sbjct: 260 VSIWDAEFYMKVDDDIHLNLGTLVSTLARYRSKSRVYIGCMKSGPVLSKKGVKYHEPEYW 319

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIY ISKDLA YI+ NSPILH YANEDVSLGSWFIGL+VEH DD 
Sbjct: 320 KFGEEGNKYFRHATGQIYGISKDLATYIANNSPILHRYANEDVSLGSWFIGLEVEHADDH 379

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
           SMCCGTPPDCEWKA+ G++CVASFDW CSGIC +V+RMK VH SCGE +GAVWNV+L
Sbjct: 380 SMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVDRMKLVHESCGEGEGAVWNVEL 436

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734745|emb|CBI16979.3| unnamed protein product [Vitis vinifera]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 182/237 (76%), Positives = 213/237 (89%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +EKEKG++IRFVIGHSA PGGVLD+ IDAE+ E++DFLRLN +EGY +LS+KT+ YFSTA
Sbjct: 154 LEKEKGVIIRFVIGHSATPGGVLDRAIDAEEEENKDFLRLNHVEGYHELSSKTRLYFSTA 213

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            S+WDA+FY+K+DDDVH+N+G L+  LA ++ KPRIYIGCMKSGPVL QKG+KY+EPE+W
Sbjct: 214 VSMWDADFYVKIDDDVHLNVGMLVRTLARYRYKPRIYIGCMKSGPVLSQKGVKYYEPEFW 273

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAISKDLAAYIS N+PILH YANEDVSLGSWFIGL+VEHVDDR
Sbjct: 274 KFGEEGNKYFRHATGQIYAISKDLAAYISINAPILHRYANEDVSLGSWFIGLEVEHVDDR 333

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
            MCCGTPPDCEWK + G+VCVASFDW CSGIC +VERMK+VHN+CGE DG VWNV+L
Sbjct: 334 MMCCGTPPDCEWKTQVGNVCVASFDWSCSGICKSVERMKDVHNTCGEGDGFVWNVEL 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493578|ref|XP_002265159.2| PREDICTED: probable beta-1,3-galactosyltransferase 8 [Vitis vinifera]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 182/237 (76%), Positives = 213/237 (89%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +EKEKG++IRFVIGHSA PGGVLD+ IDAE+ E++DFLRLN +EGY +LS+KT+ YFSTA
Sbjct: 195 LEKEKGVIIRFVIGHSATPGGVLDRAIDAEEEENKDFLRLNHVEGYHELSSKTRLYFSTA 254

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            S+WDA+FY+K+DDDVH+N+G L+  LA ++ KPRIYIGCMKSGPVL QKG+KY+EPE+W
Sbjct: 255 VSMWDADFYVKIDDDVHLNVGMLVRTLARYRYKPRIYIGCMKSGPVLSQKGVKYYEPEFW 314

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAISKDLAAYIS N+PILH YANEDVSLGSWFIGL+VEHVDDR
Sbjct: 315 KFGEEGNKYFRHATGQIYAISKDLAAYISINAPILHRYANEDVSLGSWFIGLEVEHVDDR 374

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
            MCCGTPPDCEWK + G+VCVASFDW CSGIC +VERMK+VHN+CGE DG VWNV+L
Sbjct: 375 MMCCGTPPDCEWKTQVGNVCVASFDWSCSGICKSVERMKDVHNTCGEGDGFVWNVEL 431

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294464535|gb|ADE77778.1| unknown [Picea sitchensis]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 182/235 (77%), Positives = 207/235 (88%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +E++KGIVIRFVIGHS  PGG+LD+ IDAEDA+H DFLRL  +EGY +LS KTKTYFSTA
Sbjct: 99  LEEKKGIVIRFVIGHSVTPGGILDRAIDAEDAQHNDFLRLEHVEGYHELSAKTKTYFSTA 158

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            + WDA+FY+KVDDDVHVNLG L   L+ ++SKPRIYIGCMKSGPVL QKG+KYHEPEYW
Sbjct: 159 VAKWDADFYVKVDDDVHVNLGMLATTLSRYRSKPRIYIGCMKSGPVLAQKGVKYHEPEYW 218

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAIS+DLA YIS NSPILH YANEDVSLG+WFIGLDVEH+D+R
Sbjct: 219 KFGEEGNRYFRHATGQIYAISRDLATYISINSPILHRYANEDVSLGAWFIGLDVEHIDER 278

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNV 235
           SMCCGTPPDCEWKA+ G+VCVASFDW CSGIC +VER+KEVH +C E DGAVW+ 
Sbjct: 279 SMCCGTPPDCEWKAQAGNVCVASFDWTCSGICKSVERLKEVHRTCSEGDGAVWST 333

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544244|ref|XP_003540564.1| PREDICTED: probable beta-1,3-galactosyltransferase 8-like [Glycine max]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 181/237 (76%), Positives = 212/237 (89%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +EKEKGIV+RFVIGHS  PGG+LDK IDAE+AEH+DFLRL+ +EGY +LSTKT+ YFST 
Sbjct: 142 LEKEKGIVVRFVIGHSTTPGGILDKAIDAEEAEHKDFLRLDHVEGYHELSTKTRLYFSTI 201

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            S+WDA+FY+KVDDD+H+NLG L++ LA ++S+PRIYIGCMKSGPVLYQKG+KYHE E W
Sbjct: 202 TSMWDADFYVKVDDDIHLNLGMLVSTLAKYRSRPRIYIGCMKSGPVLYQKGVKYHEAENW 261

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAISKDLA YIS N PILH YANEDVSLGSW +GL+VEHVD+R
Sbjct: 262 KFGEEGNKYFRHATGQIYAISKDLATYISINWPILHRYANEDVSLGSWLLGLEVEHVDER 321

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
           SMCCGTPPDC+WKA+ G+VCVASFDW CSGIC +VERM+++H +CGE DGAVWNVDL
Sbjct: 322 SMCCGTPPDCDWKARTGNVCVASFDWSCSGICKSVERMRDIHKTCGEGDGAVWNVDL 378

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529903|ref|XP_003533526.1| PREDICTED: probable beta-1,3-galactosyltransferase 8-like [Glycine max]

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 179/237 (75%), Positives = 211/237 (89%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +EKEKGI++RFVIGHS  PGG+LDK IDAE+AEH+DFLRL+ +EGY +LSTKT+ YFST 
Sbjct: 142 LEKEKGIIVRFVIGHSTTPGGILDKAIDAEEAEHKDFLRLDHVEGYHELSTKTRLYFSTI 201

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            S WDA+FY+KVDDD+H+NLG L++ LA ++S+PR+YIGCMKSGPVLYQKG KYHE E+W
Sbjct: 202 ISTWDADFYVKVDDDIHLNLGMLVSTLAKYRSRPRVYIGCMKSGPVLYQKGAKYHEAEHW 261

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAISKDLA YIS N PILH YANEDVSLGSW +GL+VEHVD+R
Sbjct: 262 KFGEEGNKYFRHATGQIYAISKDLATYISINWPILHRYANEDVSLGSWLLGLEVEHVDER 321

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
           SMCCGTPPDC+WKA+ G+VCVASFDW CSGIC +VERM+++H +CGE DGAVWNVDL
Sbjct: 322 SMCCGTPPDCDWKARTGNVCVASFDWSCSGICKSVERMRDIHKTCGEGDGAVWNVDL 378

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294460682|gb|ADE75915.1| unknown [Picea sitchensis]

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 182/235 (77%), Positives = 207/235 (88%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +E++KGIVIRFVIGHS  PGG+LD+ IDAEDA+H DFLRL  +EGY +LS KTKTYFSTA
Sbjct: 10  LEEKKGIVIRFVIGHSVTPGGILDRAIDAEDAQHNDFLRLEHVEGYHELSAKTKTYFSTA 69

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            + WDA+FY+KVDDDVHVNLG L   L+ ++SKPRIYIGCMKSGPVL QKG+KYHEPEYW
Sbjct: 70  VAKWDADFYVKVDDDVHVNLGMLATTLSRYRSKPRIYIGCMKSGPVLAQKGVKYHEPEYW 129

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAIS+DLA YIS NSPILH YANEDVSLG+WFIGLDVEH+D+R
Sbjct: 130 KFGEEGNRYFRHATGQIYAISRDLATYISINSPILHRYANEDVSLGAWFIGLDVEHIDER 189

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNV 235
           SMCCGTPPDCEWKA+ G+VCVASFDW CSGIC +VER+KEVH +C E DGAVW+ 
Sbjct: 190 SMCCGTPPDCEWKAQAGNVCVASFDWTCSGICKSVERLKEVHRTCSEGDGAVWST 244

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555799|ref|XP_002518935.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] gi|223541922|gb|EEF43468.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 179/237 (75%), Positives = 205/237 (86%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +E EKGI+IRFVIGHSA PGGVLD+ IDAE+ +H+DFLRLN IEGY +LS+KT+ YFSTA
Sbjct: 167 LETEKGIIIRFVIGHSASPGGVLDRAIDAEEEQHKDFLRLNHIEGYHELSSKTQIYFSTA 226

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            S WDA+FYIKVDDDVH+NLG + + LA H+SKPR+YIGCMKSGPVL QKG+KYHEPEYW
Sbjct: 227 VSRWDADFYIKVDDDVHINLGMIGSTLARHRSKPRVYIGCMKSGPVLSQKGVKYHEPEYW 286

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAISK+LA YIS N  ILH YANEDVS+GSWFIGLDVEH+DDR
Sbjct: 287 KFGEEGNKYFRHATGQIYAISKNLATYISVNRHILHRYANEDVSMGSWFIGLDVEHIDDR 346

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
           S+CCGTPPDCEWKA+ G+ C ASFDW CSGIC +VERM+EVH  CGE DGA+W+   
Sbjct: 347 SLCCGTPPDCEWKAQAGNPCAASFDWTCSGICKSVERMEEVHQRCGEGDGAIWHTSF 403

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168059711|ref|XP_001781844.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666651|gb|EDQ53299.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 177/234 (75%), Positives = 205/234 (87%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +EKEKGI++RF+IGHSA PGG+LD+ I+AEDA+H DFLRLN IEGY +LS KTK YF+TA
Sbjct: 134 LEKEKGIIVRFIIGHSATPGGILDRAIEAEDAQHNDFLRLNHIEGYHELSMKTKIYFATA 193

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
              W+A+FY+KVDDDVHVNLG L   LA H+SKPR+YIGCMKSGPVL QKG+KYHEPEYW
Sbjct: 194 VKKWNADFYVKVDDDVHVNLGVLGTTLARHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYW 253

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAIS+DLA YIS N P+LH +ANEDVSLG+W IGLDV+H+DDR
Sbjct: 254 KFGEEGNKYFRHATGQIYAISRDLANYISVNQPLLHKFANEDVSLGAWIIGLDVDHIDDR 313

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWN 234
           SMCCGTPPDCEWKA+ G+VCVASFDW CSGIC +VER++EVH  CGE DGAVW+
Sbjct: 314 SMCCGTPPDCEWKAQAGNVCVASFDWTCSGICKSVERIQEVHQRCGEGDGAVWS 367

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168003732|ref|XP_001754566.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694187|gb|EDQ80536.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 177/237 (74%), Positives = 203/237 (85%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +EKEKGIV+RFVIGHSA PGG+LD+ I+AEDA+H DFLRL+ +EGY +LS KTK YFSTA
Sbjct: 155 LEKEKGIVMRFVIGHSATPGGILDRAIEAEDAQHNDFLRLDHVEGYHELSMKTKIYFSTA 214

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
              WDAEFY+KVDDDVHVN+G L   L+ H+SKPR+YIGCMKSGPVL QKG+KYHEPEYW
Sbjct: 215 VKKWDAEFYVKVDDDVHVNVGMLATTLSRHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYW 274

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGEEGN YF HATGQIYAISKDLA YI  N P+LH YANEDVSLG+W IGLDV+H+DDR
Sbjct: 275 KFGEEGNKYFRHATGQIYAISKDLATYIDVNRPLLHKYANEDVSLGAWIIGLDVDHIDDR 334

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
           SMCCGTPPDCEWKA+ G+VCVASFDW CSGIC +VERM +VH  CGE D A+W+  +
Sbjct: 335 SMCCGTPPDCEWKAQAGNVCVASFDWTCSGICKSVERMNDVHQRCGEGDDALWSTTI 391

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
TAIR|locus:2038031	399	AT1G32930 [Arabidopsis thalian	0.959	0.586	0.739	1.2e-99
TAIR|locus:2207225	407	AT1G05170 [Arabidopsis thalian	0.959	0.574	0.705	8.2e-99
TAIR|locus:2029471	393	AT1G77810 [Arabidopsis thalian	0.959	0.595	0.720	1.5e-97
TAIR|locus:2062545	409	AT2G32430 [Arabidopsis thalian	0.954	0.569	0.699	8.4e-97
TAIR|locus:2116452	407	AT4G26940 [Arabidopsis thalian	0.946	0.567	0.693	1.8e-94
TAIR|locus:505006138	398	DD46 [Arabidopsis thaliana (ta	0.971	0.595	0.679	3.4e-93
TAIR|locus:2027352	384	AT1G11730 [Arabidopsis thalian	0.954	0.606	0.682	2.5e-90
TAIR|locus:2154247	338	AT5G53340 [Arabidopsis thalian	0.75	0.541	0.491	7.7e-48
TAIR|locus:2059531	346	AT2G25300 [Arabidopsis thalian	0.75	0.528	0.481	1.9e-44
TAIR|locus:2116627	345	AT4G32120 [Arabidopsis thalian	0.75	0.530	0.464	1.9e-44

TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)]

 Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
 Identities = 173/234 (73%), Positives = 200/234 (85%)

Query:     1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
             +E EKGI++RFVIGHS+ PGGVLD  I+AE+ +H+DF RLN IEGY +LS+KT+ YFS+A
Sbjct:   163 LETEKGIIMRFVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSA 222

Query:    61 FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
              + WDA+FYIKVDDDVHVNLG L + LA H+SKPR+YIGCMKSGPVL QKG+KYHEPEYW
Sbjct:   223 VAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYW 282

Query:   121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
             KFGEEGN YF HATGQIYAISKDLA YIS N  +LH YANEDVSLGSWFIGLDVEH+DDR
Sbjct:   283 KFGEEGNKYFRHATGQIYAISKDLATYISVNRQLLHKYANEDVSLGSWFIGLDVEHIDDR 342

Query:   181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWN 234
             S+CCGTP DCEWK + G+ C ASFDW CSGIC +V+RM EVH  CGE DGA+W+
Sbjct:   343 SLCCGTPLDCEWKGQAGNPCAASFDWSCSGICKSVDRMLEVHQRCGEGDGAIWH 396

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)]

 Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
 Identities = 165/234 (70%), Positives = 201/234 (85%)

Query:     1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
             +E+EKGI+IRFVIGHSA  GG+LD+ I+AED +H DFLRL+ +EGY +LS KTKTYFSTA
Sbjct:   171 LEEEKGIIIRFVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTA 230

Query:    61 FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
             FS+WDA+FY+KVDDDVHVN+  L   L  H+ KPR+YIGCMKSGPVL QKG++YHEPEYW
Sbjct:   231 FSMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYW 290

Query:   121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
             KFGE GN YF HATGQ+YAIS+DLA+YIS N  +LH YANEDVSLG+WFIG+DV+H+DDR
Sbjct:   291 KFGENGNKYFRHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDR 350

Query:   181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWN 234
              +CCGTPPDCEWKA+ G++CVASFDW CSGIC + +R+KEVH  CGE + A+W+
Sbjct:   351 RLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWS 404

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)]

 Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
 Identities = 173/240 (72%), Positives = 199/240 (82%)

Query:     1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
             +E+EKGIVI+F+IGHSA    +LD+ ID+EDA+H+DFLRL  +EGY +LS KTK +FSTA
Sbjct:   151 LEQEKGIVIKFMIGHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTA 210

Query:    61 FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQ------KGMKY 114
              + WDAEFYIKVDDDVHVNLG L + LA H+SKPR+YIGCMKSGPVL Q      + +KY
Sbjct:   211 VAKWDAEFYIKVDDDVHVNLGMLASTLARHRSKPRVYIGCMKSGPVLAQNLLNCFRTVKY 270

Query:   115 HEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDV 174
             HEPEYWKFGE+GN YF HATGQIYAISKDLA YIS N PILH YANEDVSLGSWFIGL+V
Sbjct:   271 HEPEYWKFGEDGNKYFRHATGQIYAISKDLANYISINQPILHKYANEDVSLGSWFIGLEV 330

Query:   175 EHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWN 234
             EH+DDR+ CCGTPPDC WKA+ G VCVASF+W CSGIC +VERMK VH  C E +GAVWN
Sbjct:   331 EHIDDRNFCCGTPPDCRWKAEAGDVCVASFEWSCSGICKSVERMKIVHEVCSEGEGAVWN 390

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0048531 "beta-1,3-galactosyltransferase activity" evidence=IDA

TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)]

 Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
 Identities = 163/233 (69%), Positives = 196/233 (84%)

Query:     1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
             +E+EKGI+IRFVIGHSA  GG+LD+ I+AED +H DFLRL+ +EGY +LS KTKTYFSTA
Sbjct:   173 LEEEKGIIIRFVIGHSATAGGILDRSIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTA 232

Query:    61 FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
              S WDAEFY+KVDDDVHVN+  L   L  H+ K R+Y+GCMKSGPVL QKG++YHEPEYW
Sbjct:   233 VSKWDAEFYVKVDDDVHVNIATLGETLVRHRKKHRVYLGCMKSGPVLSQKGVRYHEPEYW 292

Query:   121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
             KFGE GN YF HATGQ+YAIS+DLA+YIS N  +LH YANEDV+LG+WFIGLDV H+DDR
Sbjct:   293 KFGENGNKYFRHATGQLYAISRDLASYISLNQHVLHKYANEDVTLGAWFIGLDVTHIDDR 352

Query:   181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVW 233
              +CCGTPPDCEWKA+ G++CVASFDW CSGIC + +R+KEVH  CGE + A+W
Sbjct:   353 RLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSADRIKEVHKRCGEPENAIW 405

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 161/232 (69%), Positives = 199/232 (85%)

Query:     1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
             +E+EKGIV+RFVIGHS+ PGG+LD+ I AE+++H DFLRL+ +EGY +LS KTKTYF+TA
Sbjct:   172 LEEEKGIVMRFVIGHSSTPGGILDRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTA 231

Query:    61 FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
             F++WDA+FY+KVDDDVHVN+  L   LA ++ KPR+YIGCMKSGPVL QKG++YHEPEYW
Sbjct:   232 FAMWDADFYVKVDDDVHVNIATLGAELARYRMKPRVYIGCMKSGPVLAQKGVRYHEPEYW 291

Query:   121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
             KFGEEGN YF HATGQ+YAIS++LA+YIS N  +LH Y NEDVSLGSWF+GLDVEHVDDR
Sbjct:   292 KFGEEGNKYFRHATGQLYAISRELASYISINQNVLHKYVNEDVSLGSWFLGLDVEHVDDR 351

Query:   181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAV 232
              +CCGT  DCEWKA+ G++CVASFDW CSGIC + +RMK+VH  CGE + A+
Sbjct:   352 RLCCGTT-DCEWKAQAGNICVASFDWSCSGICRSADRMKDVHRRCGEGEKAL 402

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 161/237 (67%), Positives = 197/237 (83%)

Query:     1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
             +EKEKGIV++F+IGHS+ P  +LDK ID+EDA++ DF RL+ +EGY  LS KTK++FS+A
Sbjct:   159 LEKEKGIVVKFMIGHSSTPNSMLDKEIDSEDAQYNDFFRLDHVEGYYNLSAKTKSFFSSA 218

Query:    61 FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
              + WDAEFY+K+DDDVHVNLG L + LA+H+SKPR+YIGCMKSGPVL +K  KY EPE+W
Sbjct:   219 VAKWDAEFYVKIDDDVHVNLGTLASTLASHRSKPRVYIGCMKSGPVLTKKTAKYREPEFW 278

Query:   121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
             KFGEEGN YF HATGQIYAISKDLA YIS N PILH YANEDV+LGSWFIGL+VE +DDR
Sbjct:   279 KFGEEGNKYFRHATGQIYAISKDLATYISNNQPILHKYANEDVTLGSWFIGLEVEQIDDR 338

Query:   181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL 237
             + CCGTPPDCE +A+ G +CVA+FDW CSG+C +V+RM  VH  CGE   AVW+ +L
Sbjct:   339 NFCCGTPPDCEMRAEAGEMCVATFDWKCSGVCRSVDRMWMVHVMCGEGSKAVWDANL 395

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)]

 Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
 Identities = 159/233 (68%), Positives = 185/233 (79%)

Query:     1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
             +E+EKGI++RFVIGHS    G+LDK I+AE+  H DFLRL   EGY KLS KTKT+F+TA
Sbjct:   148 LEEEKGIIVRFVIGHSVLSHGILDKAIEAEEKTHGDFLRLEHTEGYMKLSAKTKTFFATA 207

Query:    61 FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
              S+WDAEFYIKVDDDVHVNL +L  AL+ H++KPR+Y+GCMKSGPVL +K +KYHEPEYW
Sbjct:   208 VSLWDAEFYIKVDDDVHVNLASLKKALSAHQNKPRVYVGCMKSGPVLARKSVKYHEPEYW 267

Query:   121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
             KFGE GN YF HATGQ YAISKDLA YI  N  +LH YANEDVSLGSWFIGL+VEHVD++
Sbjct:   268 KFGEVGNKYFRHATGQFYAISKDLATYILINQDLLHKYANEDVSLGSWFIGLNVEHVDEK 327

Query:   181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVW 233
              +CC T  DCE KA  G VC ASFDW CSGIC + ERM +VH  CGE   A+W
Sbjct:   328 RLCCSTSQDCELKAMMGHVCAASFDWKCSGICRSAERMADVHERCGEPQNALW 380

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 91/185 (49%), Positives = 128/185 (69%)

Query:     1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLN-LIEGYKKLSTKTKTYFST 59
             +E EKG++ RFVIG SA  G  +DK ID E+++  DF+ L+ ++E  ++ S K K +F+ 
Sbjct:   143 LESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEAPEEASKKVKLFFAY 202

Query:    60 AFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEY 119
             A   WDA+FY K  D+++VN+ AL   LA H   PR YIGCMKSG V  +   K++EPE+
Sbjct:   203 AADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGEVFSEPNHKWYEPEW 262

Query:   120 WKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDD 179
             WKFG++   YF HA G++Y I+  LA ++S N  ILH+YA++DVS GSWF+GLDV+HVD+
Sbjct:   263 WKFGDK-KAYFRHAYGEMYVITHALARFVSINRDILHSYAHDDVSTGSWFVGLDVKHVDE 321

Query:   180 RSMCC 184
                CC
Sbjct:   322 GKFCC 326

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 89/185 (48%), Positives = 125/185 (67%)

Query:     3 KEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRL-NLIEGYKKLSTKTKTYFSTAF 61
             +E+GIVIRFVIG S   G  LD+ ID E+   +DFL L N  E  ++L+ K K +FS A 
Sbjct:   153 EERGIVIRFVIGRSPNRGDSLDRKIDEENQARKDFLILENHEEAQEELAKKVKFFFSAAV 212

Query:    62 SIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWK 121
               WDAEFYIKVDD++ ++L  L+  L + + +   YIGCMKSG V+ ++G K++EPE+WK
Sbjct:   213 QNWDAEFYIKVDDNIDLDLEGLIGLLESRRGQDAAYIGCMKSGEVVAEEGGKWYEPEWWK 272

Query:   122 FGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRS 181
             FG+E  +YF HA G +  +SK LA Y++ NS  L TYA +D S+GSW IG+   ++DD  
Sbjct:   273 FGDE-KSYFRHAAGSLLILSKTLAQYVNINSGSLKTYAFDDTSIGSWMIGVQATYIDDNR 331

Query:   182 MCCGT 186
             +CC +
Sbjct:   332 LCCSS 336

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 86/185 (46%), Positives = 129/185 (69%)

Query:     3 KEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRL-NLIEGYKKLSTKTKTYFSTAF 61
             +E+G+VIRFVIG SA  G  LD+ ID E+   +DFL L N  E  ++L  K K ++S A 
Sbjct:   152 EERGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEEAQEELPKKVKFFYSAAV 211

Query:    62 SIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWK 121
               WDAEFY+KVDD+V ++L  ++  L + +S+   YIGCMKSG V+ ++G +++EPE+WK
Sbjct:   212 QNWDAEFYVKVDDNVDLDLEGMIALLESRRSQDGAYIGCMKSGDVITEEGSQWYEPEWWK 271

Query:   122 FGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDRS 181
             FG++  +YF HATG +  +SK+LA Y++ NS +L TYA +D ++GSW IG+   ++DD  
Sbjct:   272 FGDD-KSYFRHATGSLVILSKNLAQYVNINSGLLKTYAFDDTTIGSWMIGVQATYIDDNR 330

Query:   182 MCCGT 186
             +CC +
Sbjct:   331 LCCSS 335

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NQB7	B3GT7_ARATH	2, ., 4, ., 1, ., -	0.7160	0.9713	0.6030	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	244
PLN03193	408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	1e-146
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	2e-47

>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional

 Score =  413 bits (1064), Expect = e-146
 Identities = 166/234 (70%), Positives = 200/234 (85%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           +E+EKGI+IRFVIGHSA  GG+LD+ I+AED +H DFLRL+ +EGY +LS KTKTYF+TA
Sbjct: 172 LEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATA 231

Query: 61  FSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYW 120
            ++WDA+FY+KVDDDVHVN+  L   L  H+ KPR+YIGCMKSGPVL QKG++YHEPEYW
Sbjct: 232 VAMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYW 291

Query: 121 KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHVDDR 180
           KFGE GN YF HATGQ+YAISKDLA+YIS N  +LH YANEDVSLGSWFIGLDVEH+DDR
Sbjct: 292 KFGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDR 351

Query: 181 SMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWN 234
            +CCGTPPDCEWKA+ G++CVASFDW CSGIC + +R+KEVH  CGE + A+W+
Sbjct: 352 RLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWS 405

Length = 408

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  155 bits (394), Expect = 2e-47
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 10/182 (5%)

Query: 5   KGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIW 64
             I   F++G SA   G +   +  E   + D + ++  + Y+ L+ KT T    A S  
Sbjct: 19  GRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVDFEDTYENLTFKTLTGLLYAVSKA 78

Query: 65  D-AEFYIKVDDDVHVNLGALMNALANHK---SKPRIYIGCMKSGPVLYQKGMK-YHEPEY 119
             A++  K+DDDV+     L++ L       S+   Y   MK GPV+  K  K Y  P  
Sbjct: 79  PSAKYIGKIDDDVYFFPDKLLSLLDRGNINPSESSFYGYVMKEGPVIRNKKSKWYVPPSD 138

Query: 120 WKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSL-GSWFIGLDVEHVD 178
           +      + Y  +A+G  Y +S+D A  +   S        EDV + G     L +  VD
Sbjct: 139 YPC----SRYPPYASGPFYLLSRDAAELLLKASKHRRFLQIEDVYVTGILADDLGISRVD 194

Query: 179 DR 180
             
Sbjct: 195 LP 196

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	244
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2288	274	consensus Galactosyltransferases [Carbohydrate tra	100.0
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2287	349	consensus Galactosyltransferases [Carbohydrate tra	100.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	99.96
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.55
KOG2246	364	consensus Galactosyltransferases [Carbohydrate tra	99.46
PLN03153	537	hypothetical protein; Provisional	98.91
KOG3708	681	consensus Uncharacterized conserved protein [Funct	97.48
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	94.14
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	93.73
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	93.42
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	93.38
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	92.73
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	92.44
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	91.86
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	90.94
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	90.65
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	90.55
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	90.16
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	89.76
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	89.28
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	87.77
PRK11204	420	N-glycosyltransferase; Provisional	87.16
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	84.38
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	84.01
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	83.23
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	82.36
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	81.92
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	81.83
COG1215	439	Glycosyltransferases, probably involved in cell wa	81.41
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	81.36
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	80.41

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=9.3e-75  Score=528.68  Aligned_cols=237  Identities=70%  Similarity=1.335  Sum_probs=226.9

Q ss_pred             CcccCCeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecH
Q 045376            1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNL   80 (244)
Q Consensus         1 ~~~~~gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~   80 (244)
                      ||+++|+++|||||++++++++++++|++|+++|||||++||.|+|.|||+||+++|+||.++++++||+|+|||+|||+
T Consensus       172 le~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVnv  251 (408)
T PLN03193        172 LEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNI  251 (408)
T ss_pred             cccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEcH
Confidence            46789999999999998766688999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCCCceEEEEeecCcccccCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCc
Q 045376           81 GALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYAN  160 (244)
Q Consensus        81 ~~L~~~L~~~~~~~~~y~G~~~~~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~  160 (244)
                      ++|+.+|.+.+.++++|+|+|+.+|++.+++.|||+|++|+|+++++.|||||+|+|||||+|+|++|+.++..++.|++
T Consensus       252 ~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~L~~y~~  331 (408)
T PLN03193        252 ATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYAN  331 (408)
T ss_pred             HHHHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHHhChhhhcccCc
Confidence            99999998877777899999998999877788999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhcCCCeEecCCCcccCCCCCcccccccCCccccccCcCcccccCcHHHHHHHHHhcCCCCccccccch
Q 045376          161 EDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL  237 (244)
Q Consensus       161 EDV~iG~~l~~l~v~~~~~~~f~~~~~~~~~~k~~~~n~c~~~~~~~~~g~~~~~~~m~~~h~~~~~~~~~~~~~~~  237 (244)
                      |||+||+||.||+|+|+|+++|||+++|+|+||+++||+|+++|||+|||+|++.++|+++|++|+++..|+|++.|
T Consensus       332 EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~~~~~~csg~c~~~~~~~~~h~~c~~~~~~~~~~~~  408 (408)
T PLN03193        332 EDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSATF  408 (408)
T ss_pred             chhhhhhHhccCCceeeecccccCCCCccccccccCCCeeEEEecccCcccCCHHHHHHHHHHhcCCCcccceeecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999764

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.6e-66  Score=443.21  Aligned_cols=229  Identities=59%  Similarity=1.032  Sum_probs=218.7

Q ss_pred             CcccCCeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEec-ccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEec
Q 045376            1 MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLN-LIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVN   79 (244)
Q Consensus         1 ~~~~~gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d-~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn   79 (244)
                      ||+++||.+|||||+.. .+.+.+++|++|+++|+|+|++| ++|+|.+|+.||+++|.+|.++++++||+|+|||+|||
T Consensus        44 le~e~gv~~RFvIG~~~-~g~~~~r~ie~E~~~~~DfllLd~h~E~Y~~Ls~Kt~~~f~~A~~~~daeFyvKvDDDv~v~  122 (274)
T KOG2288|consen   44 LEEEKGVIIRFVIGTAT-LGASLDRALEEENAQHGDFLLLDRHEEAYEELSAKTKAFFSAAVAHWDAEFYVKVDDDVYVR  122 (274)
T ss_pred             hccccceEEEEEeccCC-ccHHHHHHHHHHHHhcCCeEeechhHHHHHHHHHHHHHHHHHHHHhccceEEEEccccceec
Confidence            79999999999999943 35688999999999999999999 99999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCCCceEEEEeecCcccccCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCC
Q 045376           80 LGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYA  159 (244)
Q Consensus        80 ~~~L~~~L~~~~~~~~~y~G~~~~~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~  159 (244)
                      ++.|...|++++.++++|+|||++|||+.++++|||+|+ |+|+..++ |+||+.|++|+||++++.+|..|+..++.|.
T Consensus       123 l~~L~~~la~~r~~pr~YiGcmksg~v~~~~~~kw~Epe-Wkfg~~g~-YfrhA~G~~YvlS~dLa~yi~in~~lL~~y~  200 (274)
T KOG2288|consen  123 LARLGTLLARERSHPRLYIGCMKSGPVLTQPGGKWYEPE-WKFGDNGN-YFRHATGGGYVLSKDLATYISINRQLLHKYA  200 (274)
T ss_pred             HHHHHHHHHhhccCCceEEEEecCCccccCCCCcccChh-hhcCcccc-cchhccCceEEeeHHHHHHHHHhHHHHHhhc
Confidence            999999999999999999999999999999999999999 99988777 9999999999999999999999999999999


Q ss_pred             chhHHHHHHHhcCCCeEecCCCcccCCCCCcccccccCCccccccCcCcccccCcHHHHHHHHHhcCCCCccccccch
Q 045376          160 NEDVSLGSWFIGLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGAVWNVDL  237 (244)
Q Consensus       160 ~EDV~iG~~l~~l~v~~~~~~~f~~~~~~~~~~k~~~~n~c~~~~~~~~~g~~~~~~~m~~~h~~~~~~~~~~~~~~~  237 (244)
                      +|||++|.|+.||+|+|+||+++|++++     |++.+++|..+++|+|+|+|+++.+|.++|..|.+...+.|...+
T Consensus       201 nEDVSlGaW~~gldV~h~dd~rlC~~~~-----~~~~~~~~~~~~~~kcsglC~~~~rm~~~h~~~~~~~~~~~~~~~  273 (274)
T KOG2288|consen  201 NEDVSLGAWMIGLDVEHVDDPRLCCSTP-----KALAGMVCAASFDWKCSGLCKSEDRMLEVHKYDWEGKPATCCSRF  273 (274)
T ss_pred             cCCcccceeeeeeeeeEecCCcccccch-----hhhccceeeeeecccccccCchHHHHhHHHHhhccCCCcccCccc
Confidence            9999999999999999999999999764     788999999999999999999999999999999999999997653

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=4e-46  Score=314.73  Aligned_cols=175  Identities=27%  Similarity=0.367  Sum_probs=158.1

Q ss_pred             ccCCeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhh-CCCccEEEEecCceEecHH
Q 045376            3 KEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFS-IWDAEFYIKVDDDVHVNLG   81 (244)
Q Consensus         3 ~~~gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~-~~~~~fvlK~DDD~fVn~~   81 (244)
                      +..+++++||+|.+++.++.++++|++|+++|+||||+|+.|+|.|||+||+++|+|+.+ |++++|++|+|||+|||++
T Consensus        17 ~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~~~~v~k~DDD~~vn~~   96 (195)
T PF01762_consen   17 KGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWASKHCPNAKYVLKVDDDVFVNPD   96 (195)
T ss_pred             CCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHHhhCCchhheeecCcEEEEehH
Confidence            347899999999998655678888999999999999999999999999999999999999 8889999999999999999


Q ss_pred             HHHHHHHcc--CCCC-ceEEEEeecCcccccCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCC
Q 045376           82 ALMNALANH--KSKP-RIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTY  158 (244)
Q Consensus        82 ~L~~~L~~~--~~~~-~~y~G~~~~~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~  158 (244)
                      +|.++|...  ...+ .+|.+++..+++.+++.+|||+|...   |+.+.|||||+|++|+||+++|+.|+.++..++.+
T Consensus        97 ~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~v~~~~---y~~~~yP~y~~G~~yvls~~~v~~i~~~~~~~~~~  173 (195)
T PF01762_consen   97 RLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWYVSEEE---YPDDYYPPYCSGGGYVLSSDVVKRIYKASSHTPFF  173 (195)
T ss_pred             HhhhhhhhcccCccccccccccccCCccccccccCceeeeee---cccccCCCcCCCCeEEecHHHHHHHHHHhhcCCCC
Confidence            999999987  2333 35555566677778999999999864   89999999999999999999999999999999999


Q ss_pred             CchhHHHHHHHhcCCCeEecCC
Q 045376          159 ANEDVSLGSWFIGLDVEHVDDR  180 (244)
Q Consensus       159 ~~EDV~iG~~l~~l~v~~~~~~  180 (244)
                      ++|||++|+|+.+++++++|++
T Consensus       174 ~~eDv~iGi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  174 PLEDVFIGILAEKLGIKPIHDP  195 (195)
T ss_pred             CchHHHHHHHHHHCCCCccCCC
Confidence            9999999999999999999864

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=2.4e-44  Score=345.54  Aligned_cols=206  Identities=18%  Similarity=0.277  Sum_probs=174.5

Q ss_pred             CCeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHH
Q 045376            5 KGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALM   84 (244)
Q Consensus         5 ~gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~   84 (244)
                      .+++++|+||.+.+  +.++++|++|+++||||||+||.|+|+|||+||++++.|+..|++++|+||+|||+|||+++|+
T Consensus       417 ~~v~~rFvVG~s~n--~~l~~~L~~Ea~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll  494 (636)
T PLN03133        417 GAVAVRFFVGLHKN--QMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVL  494 (636)
T ss_pred             CceEEEEEEecCCc--HHHHHHHHHHHHHcCCeEEEeeechhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHH
Confidence            46999999999874  5788999999999999999999999999999999999999889999999999999999999999


Q ss_pred             HHHHccCCCCceEEEEee-cCcccccCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcC--CCCCCCCch
Q 045376           85 NALANHKSKPRIYIGCMK-SGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNS--PILHTYANE  161 (244)
Q Consensus        85 ~~L~~~~~~~~~y~G~~~-~~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~--~~~~~~~~E  161 (244)
                      ++|......+++|+|++. ..+++|++.+|||+|...   ||.+.|||||+|+|||||+++|+.|+..+  ..++.|++|
T Consensus       495 ~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~e---yp~~~YPpYasG~gYVlS~Dla~~L~~~s~s~~l~~f~lE  571 (636)
T PLN03133        495 ASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEE---WPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGRLKMFKLE  571 (636)
T ss_pred             HHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHHH---CCCCCCCCCCCcCEEEEcHHHHHHHHHhhhhcccCcCChh
Confidence            999876666679999985 344557999999999864   89999999999999999999999998764  579999999


Q ss_pred             hHHHHHHHh-----cCCCeEecCCCcccCCCCCcccccccCCccccccCcCcccccCcHHHHHHHHHhcCCCCcc
Q 045376          162 DVSLGSWFI-----GLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGERDGA  231 (244)
Q Consensus       162 DV~iG~~l~-----~l~v~~~~~~~f~~~~~~~~~~k~~~~n~c~~~~~~~~~g~~~~~~~m~~~h~~~~~~~~~  231 (244)
                      ||++|+|++     |+.+++.++.+||..   .|          ...+.  ++ .-.+|+.|..+|+...+..++
T Consensus       572 DVyvGi~l~~l~k~gl~v~~~~~~r~~~~---~C----------~~~~i--~~-H~~sP~eM~~lW~~l~~~~~~  630 (636)
T PLN03133        572 DVAMGIWIAEMKKEGLEVKYENDGRIYNE---GC----------KDGYV--VA-HYQSPREMLCLWQKLQEGKRA  630 (636)
T ss_pred             hHhHHHHHHHhcccCCCceeeCCCcccCC---cC----------CCCeE--EE-ecCCHHHHHHHHHHHhccCCC
Confidence            999999984     778888888888753   34          32221  01 125789999999886655433

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=8.3e-43  Score=318.97  Aligned_cols=208  Identities=23%  Similarity=0.260  Sum_probs=174.3

Q ss_pred             cCCeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhh-CCCccEEEEecCceEecHHH
Q 045376            4 EKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFS-IWDAEFYIKVDDDVHVNLGA   82 (244)
Q Consensus         4 ~~gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~-~~~~~fvlK~DDD~fVn~~~   82 (244)
                      +..|+++|++|.++..+ .+++.|.+|++.|||||++||.|+|.|||+||+++++|+.+ |++++|++|+|||+|||+++
T Consensus       126 ~~~v~~~FLvG~~~~~~-~~~~~l~~Ea~~ygDIi~~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~  204 (349)
T KOG2287|consen  126 GGRVRVLFLVGLPSNED-KLNKLLADEARLYGDIIQVDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDN  204 (349)
T ss_pred             CCcEEEEEEecCCCcHH-HHHHHHHHHHHHhCCEEEEecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHH
Confidence            35699999999998654 66889999999999999999999999999999999999999 99999999999999999999


Q ss_pred             HHHHHHcc-CCCCceEEEEee-cCcccccCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCc
Q 045376           83 LMNALANH-KSKPRIYIGCMK-SGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYAN  160 (244)
Q Consensus        83 L~~~L~~~-~~~~~~y~G~~~-~~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~  160 (244)
                      |+.+|.+. .+.+.+|.|.+. ..+++|++.+|||+|+..   |+.+.|||||+|+||++|+++|+.|++++.+++.+++
T Consensus       205 L~~~L~~~~~~~~~~~~G~v~~~~~p~R~~~~KwyVp~~~---y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~i  281 (349)
T KOG2287|consen  205 LLEYLDKLNDPSSDLYYGRVIQNAPPIRDKTSKWYVPESE---YPCSVYPPYASGPGYVISGDAARRLLKASKHLKFFPI  281 (349)
T ss_pred             HHHHHhccCCCCcceEEEeecccCCCCCCCCCCCccCHHH---CCCCCCCCcCCCceeEecHHHHHHHHHHhcCCCccch
Confidence            99999998 777889999974 456667999999999963   8999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhcC-CCeEecCCCcccCC--CCCcccccccCCccccccCcCcccccCcHHHHHHHHHhcCC
Q 045376          161 EDVSLGSWFIGL-DVEHVDDRSMCCGT--PPDCEWKAKEGSVCVASFDWPCSGICNAVERMKEVHNSCGE  227 (244)
Q Consensus       161 EDV~iG~~l~~l-~v~~~~~~~f~~~~--~~~~~~k~~~~n~c~~~~~~~~~g~~~~~~~m~~~h~~~~~  227 (244)
                      |||++|+|++.. +++++++..+....  ...|.++.        .+.+    .-.++..|..+++.|..
T Consensus       282 EDV~~g~~l~~~~gi~~~~~~~~~~~~~~~~~~~~~~--------~~~~----H~~~p~e~~~~w~~~~~  339 (349)
T KOG2287|consen  282 EDVFVGGCLAEDLGIKPVNHPGFFEIPLSFDPCCYRD--------LLAV----HRLSPNEMIYLWKKLKD  339 (349)
T ss_pred             HHHHHHHHHHHhcCCCcccCcccccccccCCCCcccc--------eEEE----ecCCHHHHHHHHHHhhc
Confidence            999999999766 88887766643311  12233321        0001    11337778888777665

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=99.96  E-value=3.2e-29  Score=226.78  Aligned_cols=198  Identities=16%  Similarity=0.166  Sum_probs=145.8

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecc------------------cccCCchhHHHHHHHHHhhh-CCCc
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNL------------------IEGYKKLSTKTKTYFSTAFS-IWDA   66 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~------------------~D~y~nLt~Kt~~~~~wa~~-~~~~   66 (244)
                      .+.++|++|..++.+-+.+++|.+|+++|||||++||                  .|++.|+|+||+++|+||.+ |+++
T Consensus       121 ~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVilpf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a  200 (382)
T PTZ00210        121 SLLPLYLLAPHQSNSYLISHSLKEEAARTHDIITLPTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNV  200 (382)
T ss_pred             hhhhhhhhccCCccchhhhHHHHHHHHHhCCEEEEecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCC
Confidence            4668899999987666889999999999999999999                  77788899999999999999 8999


Q ss_pred             cEEEEecCceEecHHHHHHHHHccCCCCceEEEEeecC-cccccCCCccccccccccCCCCCCCCCCccccccccCHHHH
Q 045376           67 EFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSG-PVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLA  145 (244)
Q Consensus        67 ~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~~~-pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv  145 (244)
                      +|++|+|||+|||++++++.|+.. +...+|+|.+... .+.                  .+.+||||+|+||+||+|+|
T Consensus       201 ~YImKgDDDvFVrVp~lL~~Lr~~-prr~LY~G~v~~~~~p~------------------Rd~~PpY~~G~gYvLSrDVA  261 (382)
T PTZ00210        201 SYIVKGDDDIFIRVPKYLADLRVM-PRHGLYMGRYNYYNRIW------------------RRNQLTYVNGYCITLSRDTA  261 (382)
T ss_pred             CeEEEcCCCeEeeHHHHHHHHhhC-CCCceEEEeeCCCCccc------------------cCCCCCccccceeeccHHHH
Confidence            999999999999999999999664 4456999986421 111                  12369999999999999999


Q ss_pred             HHHHHcCCC--C---------------CCCCchhHHHHHHH-hcCCCeE--ecCCCcccCCCCCcccccccCCccc--cc
Q 045376          146 AYISFNSPI--L---------------HTYANEDVSLGSWF-IGLDVEH--VDDRSMCCGTPPDCEWKAKEGSVCV--AS  203 (244)
Q Consensus       146 ~~i~~~~~~--~---------------~~~~~EDV~iG~~l-~~l~v~~--~~~~~f~~~~~~~~~~k~~~~n~c~--~~  203 (244)
                      +.|++..+.  +               -.+..||+.+|.|+ .++..+.  .-..+.|++..      .+.+. |.  -.
T Consensus       262 ~~Lvs~~pl~rL~~~pys~~~~~~y~~~~~~~EDiMvG~vLr~~~k~~~l~~V~~~~c~Fhd------~~~~~-~~~~v~  334 (382)
T PTZ00210        262 QAIISYKPLERLVNMPFSMWDYFDFLDLGMFYEDVMVGMILREKVVYRNLISVEMGRCHFHN------AGKFG-VRKSVR  334 (382)
T ss_pred             HHHHhhChHhHhhcCCCchHHHHHHHHhhcCchHHHHHHHHHHhcCcCceeeecccccccee------cCCCC-Cccccc
Confidence            999876432  2               23579999999999 5554332  12344444311      01111 21  12


Q ss_pred             cCcCcccccCcHHHHHHHHHhcCCCCc
Q 045376          204 FDWPCSGICNAVERMKEVHNSCGERDG  230 (244)
Q Consensus       204 ~~~~~~g~~~~~~~m~~~h~~~~~~~~  230 (244)
                      ++.-|-..|+. ++=..+|.+.++...
T Consensus       335 ~~sVvvHhike-~dYa~Lm~~F~n~~~  360 (382)
T PTZ00210        335 NMSVVIHHIQE-ADYEMLMDYFPEGVI  360 (382)
T ss_pred             cceEEEEecCH-HHHHHHHHHhcCCCC
Confidence            22234445554 466678888776543

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.55  E-value=1.9e-14  Score=126.54  Aligned_cols=143  Identities=20%  Similarity=0.209  Sum_probs=71.8

Q ss_pred             CCEEEecccccCCchhHHHHHHHHHhhh-CCCccEEEEecCceEecHHHHHHHHHccCCCCceEEEEee-cCcccccCCC
Q 045376           35 QDFLRLNLIEGYKKLSTKTKTYFSTAFS-IWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMK-SGPVLYQKGM  112 (244)
Q Consensus        35 ~Dil~~d~~D~y~nLt~Kt~~~~~wa~~-~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~-~~pv~~~~~~  112 (244)
                      .+++.-+...++...+++.++.+.+... ..+.+|++++|||+||++++|.++|....+..++|+|... .++...-...
T Consensus        55 ~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~~~~~yiG~~~~~~~~~~~~~~  134 (252)
T PF02434_consen   55 VHLVNPNCDAGHCRKTLSCKMAYEYDHFLNSDKDWFCFADDDTYVNVENLRRLLSKYDPSEPIYIGRPSGDRPIEIIHRF  134 (252)
T ss_dssp             GGEEE-------------HHHHHHHHHHHHHT-SEEEEEETTEEE-HHHHHHHHTTS-TTS--EEE-EE-----------
T ss_pred             cccccCCCcchhhHHHHHHHHHHHHHhhhcCCceEEEEEeCCceecHHHHHHHHhhCCCccCEEeeeeccCccceeeccc
Confidence            4566666666665555555555455333 4688999999999999999999999999998899999863 2333210000


Q ss_pred             ccccccccccCCCCCCCCCCc-cccccccCHHHHHHHHHc--C-CCCCCC----CchhHHHHHHHhc-CCCeEecCCCcc
Q 045376          113 KYHEPEYWKFGEEGNNYFMHA-TGQIYAISKDLAAYISFN--S-PILHTY----ANEDVSLGSWFIG-LDVEHVDDRSMC  183 (244)
Q Consensus       113 kwy~~~~~~~~y~~~~yp~y~-~G~~YvlS~dlv~~i~~~--~-~~~~~~----~~EDV~iG~~l~~-l~v~~~~~~~f~  183 (244)
                      ....+        ...-..|+ +|+||+||+.+++.|...  . ......    ..||+.||.|+.. ++|+..+.+.|+
T Consensus       135 ~~~~~--------~~~~~~f~~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~fh  206 (252)
T PF02434_consen  135 NPNKS--------KDSGFWFATGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPLFH  206 (252)
T ss_dssp             -------------------EE-GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT--
T ss_pred             ccccc--------CcCceEeeCCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechhhc
Confidence            00001        11122344 679999999999999432  2 222222    3899999999977 899988888887


Q ss_pred             cC
Q 045376          184 CG  185 (244)
Q Consensus       184 ~~  185 (244)
                      .-
T Consensus       207 s~  208 (252)
T PF02434_consen  207 SH  208 (252)
T ss_dssp             -S
T ss_pred             cc
Confidence            63

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=99.46  E-value=3.3e-13  Score=124.15  Aligned_cols=120  Identities=23%  Similarity=0.364  Sum_probs=95.6

Q ss_pred             EecccccCCchhHHHHHHHHHhhh--CCCccEEEEecCceEecHHHHHHHHHccCCCCceEEEEeecCcccccCCCcccc
Q 045376           39 RLNLIEGYKKLSTKTKTYFSTAFS--IWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHE  116 (244)
Q Consensus        39 ~~d~~D~y~nLt~Kt~~~~~wa~~--~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~~~pv~~~~~~kwy~  116 (244)
                      ..+..|+|+++..||...|+++..  ..+++|++|+|||||+.++||..+|.+..+.+.+|+|+... +.         .
T Consensus       140 ~~~~~~g~~~~~~ktr~~~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yDp~~p~YiG~~~~-~~---------~  209 (364)
T KOG2246|consen  140 YYNLPDGYRSLWRKTRIAFKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYDPEKPVYLGYRSK-SY---------F  209 (364)
T ss_pred             eccCCcchHHHHHHHHHHHHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcCCCCcEEeccccc-cc---------c
Confidence            477889999999999999999985  57999999999999999999999999999999999998431 11         1


Q ss_pred             ccccccCCCCCCCCCCccccccccCHHHHHHHHHcCC-----CCCCC--CchhHHHHHHHhcCCCeEecC
Q 045376          117 PEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSP-----ILHTY--ANEDVSLGSWFIGLDVEHVDD  179 (244)
Q Consensus       117 ~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~-----~~~~~--~~EDV~iG~~l~~l~v~~~~~  179 (244)
                      .         +.|-  .+|+||++|+.+.+.+++...     -...+  ..||+-||.||+.++|...|.
T Consensus       210 ~---------~~y~--~g~ag~~ls~aa~~~la~~l~~~~~~C~~~~~~~~eD~~i~~Cl~~~GV~~~d~  268 (364)
T KOG2246|consen  210 Q---------NGYS--SGGAGYVLSFAALRRLAERLLNNEDKCPQRYPSYGEDRRIGRCLAEVGVPATDE  268 (364)
T ss_pred             c---------cccc--cCCCCcceeHHHHHHHHHHHhcchhhcccccCCchhHHHHHHHHHHhCCCccCc
Confidence            1         1121  278999999999988775431     12233  399999999998888876554

>PLN03153 hypothetical protein; Provisional

Probab=98.91  E-value=6.7e-09  Score=98.35  Aligned_cols=106  Identities=22%  Similarity=0.169  Sum_probs=79.1

Q ss_pred             CCCccEEEEecCceEecHHHHHHHHHccCCCCceEEEEeec-CcccccCCCccccccccccCCCCCCCCCCccccccccC
Q 045376           63 IWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKS-GPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAIS  141 (244)
Q Consensus        63 ~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~~-~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS  141 (244)
                      .++++|++++|||||+.+++|++.|.+.++.+..|+|.... ..-           . -.|+     |-..-+|+||+||
T Consensus       208 ~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDptkp~YIGs~Se~~~q-----------n-~~f~-----~~fA~GGAG~~LS  270 (537)
T PLN03153        208 LPDVRWFVLGDDDTIFNADNLVAVLSKYDPSEMVYVGGPSESHSA-----------N-SYFS-----HNMAFGGGGIAIS  270 (537)
T ss_pred             CCCCCEEEEecCCccccHHHHHHHHhhcCCCCCEEeccccccccc-----------c-cccc-----cccccCCceEEEc
Confidence            58999999999999999999999999999999999997531 100           0 0000     1111289999999


Q ss_pred             HHHHHHHHHcCCC-C---CCCCchhHHHHHHHhcCCCeEecCCCcccC
Q 045376          142 KDLAAYISFNSPI-L---HTYANEDVSLGSWFIGLDVEHVDDRSMCCG  185 (244)
Q Consensus       142 ~dlv~~i~~~~~~-~---~~~~~EDV~iG~~l~~l~v~~~~~~~f~~~  185 (244)
                      +.+++.|...... .   +...-+|.-||.|+..++|...+.++|...
T Consensus       271 rPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~gfhQ~  318 (537)
T PLN03153        271 YPLAEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREPGFHQW  318 (537)
T ss_pred             HHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecCCcccc
Confidence            9999988765321 1   222468889999998888888788888763

>KOG3708 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.48  E-value=0.00044  Score=65.65  Aligned_cols=114  Identities=18%  Similarity=0.228  Sum_probs=77.6

Q ss_pred             ecccccCCchhHHHHH-HHHHhhh--CCCccEEEEecCceEecHHHHHHHHHccCCCCceEEEEeecCcccccCCCcccc
Q 045376           40 LNLIEGYKKLSTKTKT-YFSTAFS--IWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHE  116 (244)
Q Consensus        40 ~d~~D~y~nLt~Kt~~-~~~wa~~--~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~~~pv~~~~~~kwy~  116 (244)
                      +...-.|..-..|+.. .+++...  .-+++|++-+-|+||||...|++.+........+|+|.--.     +       
T Consensus        69 ~~~vs~~d~r~~~~~s~vl~~l~~~~~~~YDwFll~~D~tYv~a~~L~~l~~hmsin~dlymGEe~~-----~-------  136 (681)
T KOG3708|consen   69 LTNVSPYDLRGQKTHSMVLGLLFNMVHNNYDWFLLAKDSTYVNAFVLLRLIDHMSINEDLYMGEEAE-----D-------  136 (681)
T ss_pred             ccccCccccCccccHHHHHHHHHHhhccccceEEEecCcceecHHHHHHHHhhcccccccccchhhh-----C-------
Confidence            3333334333444443 4556555  46899999999999999999999999887788899993110     0       


Q ss_pred             ccccccCCCCCCCCCCc-cccccccCHHHHHHHHHcCCCCC---CCCchhHHHHHHH---hcCCCeEe
Q 045376          117 PEYWKFGEEGNNYFMHA-TGQIYAISKDLAAYISFNSPILH---TYANEDVSLGSWF---IGLDVEHV  177 (244)
Q Consensus       117 ~~~~~~~y~~~~yp~y~-~G~~YvlS~dlv~~i~~~~~~~~---~~~~EDV~iG~~l---~~l~v~~~  177 (244)
                             -++ .    | .|.||+||+.++..+-.+-..-+   .-.=.|+.+|.|+   .|++.+..
T Consensus       137 -------gs~-r----C~l~~G~LLS~s~l~~lrnnle~C~~~~lsad~d~~lgrCi~~At~v~C~~~  192 (681)
T KOG3708|consen  137 -------GSG-R----CRLDTGMLLSQSLLHALRNNLEGCRNDILSADPDEWLGRCIQDATGVGCKPL  192 (681)
T ss_pred             -------ccC-c----cccccceeecHHHHHHHHhhHHHhhcccccCCcHHHHHHHHHHhhcCCccch
Confidence                   011 1    5 58899999999999977643222   2245689999999   35554443

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=94.14  E-value=1.5  Score=36.12  Aligned_cols=134  Identities=17%  Similarity=0.126  Sum_probs=77.4

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCC--EEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHH
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQD--FLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGAL   83 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~D--il~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L   83 (244)
                      .+++++|...+.+   ...+.+++-.+.+..  +......... ....|.-. +..+.+..+.+|++..|+|+.+.++.|
T Consensus        30 ~~eiivVdd~s~d---~t~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~-~n~g~~~a~~d~i~~~D~D~~~~~~~l  104 (196)
T cd02520          30 KYEILFCVQDEDD---PAIPVVRKLIAKYPNVDARLLIGGEKV-GINPKVNN-LIKGYEEARYDILVISDSDISVPPDYL  104 (196)
T ss_pred             CeEEEEEeCCCcc---hHHHHHHHHHHHCCCCcEEEEecCCcC-CCCHhHHH-HHHHHHhCCCCEEEEECCCceEChhHH
Confidence            4677777776653   222344444455553  3222221111 12344433 344555567899999999999988888


Q ss_pred             HHHHHccCCCCceEEEEeecCcccccCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhH
Q 045376           84 MNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDV  163 (244)
Q Consensus        84 ~~~L~~~~~~~~~y~G~~~~~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV  163 (244)
                      ...+..... +.  +|.+.+.                           ++.|++.++.+++.+.+---. .+..+..||.
T Consensus       105 ~~l~~~~~~-~~--~~~v~~~---------------------------~~~g~~~~~r~~~~~~~ggf~-~~~~~~~eD~  153 (196)
T cd02520         105 RRMVAPLMD-PG--VGLVTCL---------------------------CAFGKSMALRREVLDAIGGFE-AFADYLAEDY  153 (196)
T ss_pred             HHHHHHhhC-CC--CCeEEee---------------------------cccCceeeeEHHHHHhccChH-HHhHHHHHHH
Confidence            777765321 11  1221110                           357899999999998774321 1222347999


Q ss_pred             HHHHHHhcCCCe
Q 045376          164 SLGSWFIGLDVE  175 (244)
Q Consensus       164 ~iG~~l~~l~v~  175 (244)
                      .++.-+...+.+
T Consensus       154 ~l~~rl~~~G~~  165 (196)
T cd02520         154 FLGKLIWRLGYR  165 (196)
T ss_pred             HHHHHHHHcCCe
Confidence            999888544433

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=93.73  E-value=1.4  Score=36.70  Aligned_cols=157  Identities=12%  Similarity=0.023  Sum_probs=71.6

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCCE--EEecccccCCch--hHHHHHHHHHhhhCCCccEEEEecCceEecHH
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDF--LRLNLIEGYKKL--STKTKTYFSTAFSIWDAEFYIKVDDDVHVNLG   81 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Di--l~~d~~D~y~nL--t~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~   81 (244)
                      .++++.+...+..   ...+.+++-.+.+...  -.+...   .|.  +.|..+ ++++.+..+.+|++..|||+.+.++
T Consensus        30 ~~~v~vvd~~~~~---~~~~~~~~~~~~~~~~~v~vi~~~---~~~g~~~k~~a-~n~~~~~~~~d~i~~lD~D~~~~p~  102 (228)
T PF13641_consen   30 RLEVVVVDDGSDD---ETAEILRALAARYPRVRVRVIRRP---RNPGPGGKARA-LNEALAAARGDYILFLDDDTVLDPD  102 (228)
T ss_dssp             TEEEEEEEE-SSS----GCTTHHHHHHTTGG-GEEEEE-------HHHHHHHHH-HHHHHHH---SEEEEE-SSEEE-CH
T ss_pred             CeEEEEEECCCCh---HHHHHHHHHHHHcCCCceEEeecC---CCCCcchHHHH-HHHHHHhcCCCEEEEECCCcEECHH
Confidence            3555555544432   2223455555556553  222221   222  234443 4555555579999999999999988


Q ss_pred             HHHHHHHcc-CCCCceEEEEeecCc--ccccCCC-----ccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCC
Q 045376           82 ALMNALANH-KSKPRIYIGCMKSGP--VLYQKGM-----KYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSP  153 (244)
Q Consensus        82 ~L~~~L~~~-~~~~~~y~G~~~~~p--v~~~~~~-----kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~  153 (244)
                      -|...+... .+.-....|.+...+  .......     .|+... .........  .++.|++.++.+++++.+-.-..
T Consensus       103 ~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~G~~~~~rr~~~~~~g~fd~  179 (228)
T PF13641_consen  103 WLERLLAAFADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRF-RSGRRALGV--AFLSGSGMLFRRSALEEVGGFDP  179 (228)
T ss_dssp             HHHHHHHHHHBSS--EEEEEEEETTCCCEEEE-TT--S-EETTTS--TT-B------S-B--TEEEEEHHHHHHH-S--S
T ss_pred             HHHHHHHHHHhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhh-hhhhcccce--eeccCcEEEEEHHHHHHhCCCCC
Confidence            888877765 233233334332111  0000001     111110 000111111  34579999999999998853222


Q ss_pred             CCCCCCchhHHHHHHHhcCCCe
Q 045376          154 ILHTYANEDVSLGSWFIGLDVE  175 (244)
Q Consensus       154 ~~~~~~~EDV~iG~~l~~l~v~  175 (244)
                         ....||..++.-+...+.+
T Consensus       180 ---~~~~eD~~l~~r~~~~G~~  198 (228)
T PF13641_consen  180 ---FILGEDFDLCLRLRAAGWR  198 (228)
T ss_dssp             ---SSSSHHHHHHHHHHHTT--
T ss_pred             ---CCcccHHHHHHHHHHCCCc
Confidence               3446999999988555443

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=93.42  E-value=0.12  Score=42.73  Aligned_cols=126  Identities=16%  Similarity=0.091  Sum_probs=72.5

Q ss_pred             hhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHHHHHccCC-CCceEEEEeecCcccccCCCccccccccccC---C
Q 045376           49 LSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKS-KPRIYIGCMKSGPVLYQKGMKYHEPEYWKFG---E  124 (244)
Q Consensus        49 Lt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~-~~~~y~G~~~~~pv~~~~~~kwy~~~~~~~~---y  124 (244)
                      ...|+-.......+..+.++++..|+|+.|+++-|...+..... .-.+-.|.....|..  ......+.-...+.   +
T Consensus        15 ~N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~--~~~~~l~~~~~~~~~~~~   92 (175)
T PF13506_consen   15 CNPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPAR--GFWSRLEAAFFNFLPGVL   92 (175)
T ss_pred             CChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCc--CHHHHHHHHHHhHHHHHH
Confidence            34676666555443378999999999999999988888876543 222222211111110  00000111000000   0


Q ss_pred             CCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHhcCCCeEe
Q 045376          125 EGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLDVEHV  177 (244)
Q Consensus       125 ~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~~l~v~~~  177 (244)
                      ..-.-.+++.|+.+++.+++++.+--- ..+..+--||..+|..+...+.+..
T Consensus        93 ~a~~~~~~~~G~~m~~rr~~L~~~GG~-~~l~~~ladD~~l~~~~~~~G~~v~  144 (175)
T PF13506_consen   93 QALGGAPFAWGGSMAFRREALEEIGGF-EALADYLADDYALGRRLRARGYRVV  144 (175)
T ss_pred             HHhcCCCceecceeeeEHHHHHHcccH-HHHhhhhhHHHHHHHHHHHCCCeEE
Confidence            001235678999999999999876311 1233356999999999966665543

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=93.38  E-value=0.81  Score=42.19  Aligned_cols=161  Identities=14%  Similarity=0.133  Sum_probs=83.1

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCC--EEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHH
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQD--FLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGAL   83 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~D--il~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L   83 (244)
                      .++++++...+.+  +. .+.+++=.+.|.+  +..+ ....-.....|.-+..+ +.+..+.++++.+|+|+.+.++.|
T Consensus        70 ~~EIivvdd~s~D--~t-~~iv~~~~~~~p~~~i~~v-~~~~~~G~~~K~~~l~~-~~~~a~ge~i~~~DaD~~~~p~~L  144 (373)
T TIGR03472        70 GFQMLFGVQDPDD--PA-LAVVRRLRADFPDADIDLV-IDARRHGPNRKVSNLIN-MLPHARHDILVIADSDISVGPDYL  144 (373)
T ss_pred             CeEEEEEeCCCCC--cH-HHHHHHHHHhCCCCceEEE-ECCCCCCCChHHHHHHH-HHHhccCCEEEEECCCCCcChhHH
Confidence            4677776665543  22 2233333455666  3223 11111223457655544 344568999999999999999988


Q ss_pred             HHHHHccCCCCceEEEEe-ecCcc--cccC-----CCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCCCC
Q 045376           84 MNALANHKSKPRIYIGCM-KSGPV--LYQK-----GMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPIL  155 (244)
Q Consensus        84 ~~~L~~~~~~~~~y~G~~-~~~pv--~~~~-----~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~  155 (244)
                      .+.+.......--.+++. ...+.  ....     ..-++.|... ..... .-+.+|.|+..++.+++.+.+---.. +
T Consensus       145 ~~lv~~~~~~~v~~V~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~-~~~~~~~G~~~a~RR~~l~~iGGf~~-~  221 (373)
T TIGR03472       145 RQVVAPLADPDVGLVTCLYRGRPVPGFWSRLGAMGINHNFLPSVM-VARAL-GRARFCFGATMALRRATLEAIGGLAA-L  221 (373)
T ss_pred             HHHHHHhcCCCcceEeccccCCCCCCHHHHHHHHHhhhhhhHHHH-HHHhc-cCCccccChhhheeHHHHHHcCChHH-h
Confidence            888776532221122221 11110  0000     0001111100 00000 11345789999999999988743221 1


Q ss_pred             CCCCchhHHHHHHHhcCCC
Q 045376          156 HTYANEDVSLGSWFIGLDV  174 (244)
Q Consensus       156 ~~~~~EDV~iG~~l~~l~v  174 (244)
                      .....||+.+|.-+...+.
T Consensus       222 ~~~~~ED~~l~~~i~~~G~  240 (373)
T TIGR03472       222 AHHLADDYWLGELVRALGL  240 (373)
T ss_pred             cccchHHHHHHHHHHHcCC
Confidence            2223699999999954443

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=92.73  E-value=2.5  Score=35.33  Aligned_cols=158  Identities=12%  Similarity=-0.017  Sum_probs=77.8

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHH
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMN   85 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~   85 (244)
                      ..+++.+-+.+.+   ...+.++...+++..+....-...  ...    ..++.+.+..+.+|++.+|+|..+.++-|.+
T Consensus        31 ~~evivvd~~s~d---~~~~~~~~~~~~~~~v~~i~~~~~--~~~----~a~N~g~~~a~~d~v~~lD~D~~~~~~~l~~  101 (249)
T cd02525          31 LIEIIVVDGGSTD---GTREIVQEYAAKDPRIRLIDNPKR--IQS----AGLNIGIRNSRGDIIIRVDAHAVYPKDYILE  101 (249)
T ss_pred             ccEEEEEeCCCCc---cHHHHHHHHHhcCCeEEEEeCCCC--Cch----HHHHHHHHHhCCCEEEEECCCccCCHHHHHH
Confidence            3455555544432   223444444444444444432221  121    3456666655899999999999999888888


Q ss_pred             HHHccCCCC-ceEEEEeec---Ccccc----cCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCC
Q 045376           86 ALANHKSKP-RIYIGCMKS---GPVLY----QKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHT  157 (244)
Q Consensus        86 ~L~~~~~~~-~~y~G~~~~---~pv~~----~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~  157 (244)
                      .+......+ .+..|....   .+...    .....+.....+ +.......-.++.|++.++++++.+.+.-....  .
T Consensus       102 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~  178 (249)
T cd02525         102 LVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSA-YRGGAVKIGYVDTVHHGAYRREVFEKVGGFDES--L  178 (249)
T ss_pred             HHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhccCCcc-ccccccccccccccccceEEHHHHHHhCCCCcc--c
Confidence            776543323 234444321   11100    000000000000 000000101135678888999998876432222  2


Q ss_pred             CCchhHHHHHHHhcCCCe
Q 045376          158 YANEDVSLGSWFIGLDVE  175 (244)
Q Consensus       158 ~~~EDV~iG~~l~~l~v~  175 (244)
                      ...||..++.-+...+.+
T Consensus       179 ~~~eD~~l~~r~~~~G~~  196 (249)
T cd02525         179 VRNEDAELNYRLRKAGYK  196 (249)
T ss_pred             CccchhHHHHHHHHcCcE
Confidence            347999988766544433

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=92.44  E-value=2.6  Score=32.62  Aligned_cols=82  Identities=20%  Similarity=0.233  Sum_probs=52.9

Q ss_pred             CCccEEEEecCceEecHHHHHHHHHccCCCCc-eEEEEeecCcccccCCCccccccccccCCCCCCCCCCccccccccCH
Q 045376           64 WDAEFYIKVDDDVHVNLGALMNALANHKSKPR-IYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISK  142 (244)
Q Consensus        64 ~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~-~y~G~~~~~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~  142 (244)
                      .+.+|++..|||..+.++.+...+......+. ..++..                               +.|++.++++
T Consensus        73 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~  121 (166)
T cd04186          73 AKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK-------------------------------VSGAFLLVRR  121 (166)
T ss_pred             CCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-------------------------------CceeeEeeeH
Confidence            38999999999999998888877764322221 111211                               4688899999


Q ss_pred             HHHHHHHHcCCCCCCCCchhHHHHHHH--hcCCCeEe
Q 045376          143 DLAAYISFNSPILHTYANEDVSLGSWF--IGLDVEHV  177 (244)
Q Consensus       143 dlv~~i~~~~~~~~~~~~EDV~iG~~l--~~l~v~~~  177 (244)
                      ++++.+-.-...... ..||..+..-+  .|..+...
T Consensus       122 ~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~  157 (166)
T cd04186         122 EVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYV  157 (166)
T ss_pred             HHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEc
Confidence            988876432222222 56888877666  45555443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=91.86  E-value=2.3  Score=35.09  Aligned_cols=163  Identities=15%  Similarity=-0.004  Sum_probs=80.7

Q ss_pred             eEEEEEeeeCCCCCchhHHHHHHHHhh--CCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHH
Q 045376            7 IVIRFVIGHSAKPGGVLDKGIDAEDAE--HQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALM   84 (244)
Q Consensus         7 v~v~FvlG~~~~~~~~~~~~l~~E~~~--~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~   84 (244)
                      +.++.|-..+.+   ...+.++ +...  +..+..+...... |. -|. ..++++.+..+.+|++.+|+|..+.++.|.
T Consensus        29 ~eiivvdd~s~d---~t~~~~~-~~~~~~~~~v~~~~~~~~~-~~-g~~-~a~n~g~~~~~~d~i~~~D~D~~~~~~~l~  101 (229)
T cd04192          29 FEVILVDDHSTD---GTVQILE-FAAAKPNFQLKILNNSRVS-IS-GKK-NALTTAIKAAKGDWIVTTDADCVVPSNWLL  101 (229)
T ss_pred             eEEEEEcCCCCc---ChHHHHH-HHHhCCCcceEEeeccCcc-cc-hhH-HHHHHHHHHhcCCEEEEECCCcccCHHHHH
Confidence            566666555432   2223343 2323  3345555554422 22 233 234555555678999999999999988888


Q ss_pred             HHHHccCC-CCceEEEEeecCcc---ccc-CCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCC
Q 045376           85 NALANHKS-KPRIYIGCMKSGPV---LYQ-KGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYA  159 (244)
Q Consensus        85 ~~L~~~~~-~~~~y~G~~~~~pv---~~~-~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~  159 (244)
                      ..+..... ....+.|.....+.   ... ....+..............++..+.|++.++++++...+---... ....
T Consensus       102 ~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~ggf~~~-~~~~  180 (229)
T cd04192         102 TFVAFIQKEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEVGGFEGN-DHIA  180 (229)
T ss_pred             HHHHHhhcCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHhcCCccc-cccc
Confidence            87764432 22344554321110   000 000000000000001122345556799999999999887433222 2234


Q ss_pred             chhHHHHHHH--hcC-CCeEe
Q 045376          160 NEDVSLGSWF--IGL-DVEHV  177 (244)
Q Consensus       160 ~EDV~iG~~l--~~l-~v~~~  177 (244)
                      .||..++.-+  .|. .+...
T Consensus       181 ~eD~~~~~~~~~~g~~~~~~~  201 (229)
T cd04192         181 SGDDELLLAKVASKYPKVAYL  201 (229)
T ss_pred             cCCHHHHHHHHHhCCCCEEEe
Confidence            6776665544  454 44443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=90.94  E-value=1.1  Score=37.34  Aligned_cols=117  Identities=12%  Similarity=0.018  Sum_probs=64.6

Q ss_pred             HHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCce--EEEEee--c-Cc---ccccC--CCcccccc-ccccCCCC
Q 045376           58 STAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRI--YIGCMK--S-GP---VLYQK--GMKYHEPE-YWKFGEEG  126 (244)
Q Consensus        58 ~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~--y~G~~~--~-~p---v~~~~--~~kwy~~~-~~~~~y~~  126 (244)
                      ..+.+..+.+|++..|+|+++.++.|.+.+......+.+  ..|...  . .+   ..+..  ....+... .+  .. .
T Consensus        77 n~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~  153 (234)
T cd06421          77 NNALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQP--GR-D  153 (234)
T ss_pred             HHHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHH--HH-h
Confidence            444444488999999999999998888887765432332  222211  1 10   00000  00000000 00  00 0


Q ss_pred             CCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHhcC--CCeEecCC
Q 045376          127 NNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGL--DVEHVDDR  180 (244)
Q Consensus       127 ~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~~l--~v~~~~~~  180 (244)
                      .....++.|++.++++++.+.+..-.   ..+..||..++.-+...  .+..+++.
T Consensus       154 ~~~~~~~~g~~~~~r~~~~~~ig~~~---~~~~~eD~~l~~r~~~~g~~i~~~~~~  206 (234)
T cd06421         154 RWGAAFCCGSGAVVRREALDEIGGFP---TDSVTEDLATSLRLHAKGWRSVYVPEP  206 (234)
T ss_pred             hcCCceecCceeeEeHHHHHHhCCCC---ccceeccHHHHHHHHHcCceEEEecCc
Confidence            11245568999999999998874322   23448999999888544  44444443

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=90.65  E-value=1.3  Score=36.20  Aligned_cols=116  Identities=15%  Similarity=0.134  Sum_probs=65.1

Q ss_pred             EEEEecCceEecHHHHHHHHHccCCCCceEE--EEeecCcccccCCCccccccc-ccc-----CCCCCCCCCCccccccc
Q 045376           68 FYIKVDDDVHVNLGALMNALANHKSKPRIYI--GCMKSGPVLYQKGMKYHEPEY-WKF-----GEEGNNYFMHATGQIYA  139 (244)
Q Consensus        68 fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~--G~~~~~pv~~~~~~kwy~~~~-~~~-----~y~~~~yp~y~~G~~Yv  139 (244)
                      ||+-+|+|+-+..+-|.+.+.... .+++-+  |.....+. ...-.++...+. +..     .......+.++.|++.+
T Consensus         1 ~v~~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~   78 (193)
T PF13632_consen    1 YVLFLDADTRLPPDFLERLVAALE-DPKVDAVQGPIIFRNR-GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGML   78 (193)
T ss_pred             CEEEEcCCCCCChHHHHHHHHHHh-CCCceEEEccEEecCC-CChhheeehhhhhhhhhhhHHHHHhcCCCccccCccee
Confidence            688999999999988888777655 333222  22221000 000011111110 000     00112346668899999


Q ss_pred             cCHHHHHHHHHcCCCCCCCCchhHHHHHHH--hcCCCeEecCCCcccCCC
Q 045376          140 ISKDLAAYISFNSPILHTYANEDVSLGSWF--IGLDVEHVDDRSMCCGTP  187 (244)
Q Consensus       140 lS~dlv~~i~~~~~~~~~~~~EDV~iG~~l--~~l~v~~~~~~~f~~~~~  187 (244)
                      +++++++.+.--.  -.....||..++.=+  +|..+..+++....+..|
T Consensus        79 ~r~~~l~~vg~~~--~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p  126 (193)
T PF13632_consen   79 FRREALREVGGFD--DPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAP  126 (193)
T ss_pred             eeHHHHHHhCccc--ccccccchHHHHHHHHHCCCEEEEecccceeeeCC
Confidence            9999999875322  234457999998877  455666666664444333

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=90.55  E-value=4.9  Score=30.68  Aligned_cols=94  Identities=12%  Similarity=0.167  Sum_probs=49.8

Q ss_pred             HHHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCc--eEEEEeec--C--ccccc-CCCcccccccccc-CCCCC
Q 045376           56 YFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPR--IYIGCMKS--G--PVLYQ-KGMKYHEPEYWKF-GEEGN  127 (244)
Q Consensus        56 ~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~--~y~G~~~~--~--pv~~~-~~~kwy~~~~~~~-~y~~~  127 (244)
                      ..+++.+..+.+|++.+|+|..+....|.+.+......+.  +..|....  .  ..... ...++........ .....
T Consensus        69 ~~n~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (180)
T cd06423          69 ALNAGLRHAKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSAL  148 (180)
T ss_pred             HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhhee
Confidence            3445555458999999999999998877777444433232  33333321  1  11100 0001111110000 00012


Q ss_pred             CCCCCccccccccCHHHHHHHH
Q 045376          128 NYFMHATGQIYAISKDLAAYIS  149 (244)
Q Consensus       128 ~yp~y~~G~~YvlS~dlv~~i~  149 (244)
                      ..+..+.|.+++++++++..+-
T Consensus       149 ~~~~~~~g~~~~~~~~~~~~~g  170 (180)
T cd06423         149 GGVLVLSGAFGAFRREALREVG  170 (180)
T ss_pred             cceeecCchHHHHHHHHHHHhC
Confidence            3445678999999999988764

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=90.16  E-value=1.8  Score=33.23  Aligned_cols=135  Identities=13%  Similarity=0.103  Sum_probs=64.5

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHH
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMN   85 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~   85 (244)
                      ...+.+|-..+.   +...+.+++-.+....+..+...+.. .+..-...+++.    ...+|++.+|||.++..+.|..
T Consensus        27 ~~eiivvdd~s~---d~~~~~~~~~~~~~~~i~~i~~~~n~-g~~~~~n~~~~~----a~~~~i~~ld~D~~~~~~~l~~   98 (169)
T PF00535_consen   27 DFEIIVVDDGST---DETEEILEEYAESDPNIRYIRNPENL-GFSAARNRGIKH----AKGEYILFLDDDDIISPDWLEE   98 (169)
T ss_dssp             EEEEEEEECS-S---SSHHHHHHHHHCCSTTEEEEEHCCCS-HHHHHHHHHHHH------SSEEEEEETTEEE-TTHHHH
T ss_pred             CEEEEEeccccc---cccccccccccccccccccccccccc-cccccccccccc----cceeEEEEeCCCceEcHHHHHH
Confidence            445544444442   23333444444435566666666554 333333334444    3455999999999998776665


Q ss_pred             HHHccCC-CCceEEEEee--cCcccc-cCCC---ccccccccccCCCCCCCCCCccccccccCHHHHHHH
Q 045376           86 ALANHKS-KPRIYIGCMK--SGPVLY-QKGM---KYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYI  148 (244)
Q Consensus        86 ~L~~~~~-~~~~y~G~~~--~~pv~~-~~~~---kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i  148 (244)
                      ++..... ...+.+|...  ...... ....   .+..............-.+++.|++-++++++.+.+
T Consensus        99 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~  168 (169)
T PF00535_consen   99 LVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEEI  168 (169)
T ss_dssp             HHHHHHHCTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHHC
T ss_pred             HHHHHHhCCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHhh
Confidence            5554433 3345555542  111110 0110   011110000001112334567888999999888764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=89.76  E-value=3  Score=38.59  Aligned_cols=161  Identities=14%  Similarity=0.052  Sum_probs=80.9

Q ss_pred             eEEEEEeeeCCCCCchhHHHHHHH-HhhCC---CEEEecccccCCchhHHH---HHHHHHhhh-CCCccEEEEecCceEe
Q 045376            7 IVIRFVIGHSAKPGGVLDKGIDAE-DAEHQ---DFLRLNLIEGYKKLSTKT---KTYFSTAFS-IWDAEFYIKVDDDVHV   78 (244)
Q Consensus         7 v~v~FvlG~~~~~~~~~~~~l~~E-~~~~~---Dil~~d~~D~y~nLt~Kt---~~~~~wa~~-~~~~~fvlK~DDD~fV   78 (244)
                      +++++|-..+.+.  .  .++.++ .+++.   .+..+...+.-.+-.-|.   ..+++.+.. ..+.+|++.+|+|+.+
T Consensus        71 ~eIIVVDd~StD~--T--~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~  146 (384)
T TIGR03469        71 LHVILVDDHSTDG--T--ADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAH  146 (384)
T ss_pred             eEEEEEeCCCCCc--H--HHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCC
Confidence            5666666655432  2  233333 23333   344444322212223443   335555554 4458999999999999


Q ss_pred             cHHHHHHHHHccCCCC-ceEEEEeecCcccccCCCccccc-----------cccccCCCCCCCCCCccccccccCHHHHH
Q 045376           79 NLGALMNALANHKSKP-RIYIGCMKSGPVLYQKGMKYHEP-----------EYWKFGEEGNNYFMHATGQIYAISKDLAA  146 (244)
Q Consensus        79 n~~~L~~~L~~~~~~~-~~y~G~~~~~pv~~~~~~kwy~~-----------~~~~~~y~~~~yp~y~~G~~YvlS~dlv~  146 (244)
                      .++.|.+.+......+ .+..|......  .....+...+           ..| ...+ ......+.|++.++++++.+
T Consensus       147 ~p~~l~~lv~~~~~~~~~~vs~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~G~~~lirr~~~~  222 (384)
T TIGR03469       147 GPDNLARLVARARAEGLDLVSLMVRLRC--ESFWEKLLIPAFVFFFQKLYPFRW-VNDP-RRRTAAAAGGCILIRREALE  222 (384)
T ss_pred             ChhHHHHHHHHHHhCCCCEEEecccccC--CCHHHHHHHHHHHHHHHHhcchhh-hcCC-CccceeecceEEEEEHHHHH
Confidence            9888888776543322 23222221100  0000000000           000 0001 11234467999999999998


Q ss_pred             HHHHcCCCCCCCCchhHHHHHHHh--cCCCeE
Q 045376          147 YISFNSPILHTYANEDVSLGSWFI--GLDVEH  176 (244)
Q Consensus       147 ~i~~~~~~~~~~~~EDV~iG~~l~--~l~v~~  176 (244)
                      .+--.... .....||+.++.-+.  |..+..
T Consensus       223 ~vGGf~~~-~~~~~ED~~L~~r~~~~G~~v~~  253 (384)
T TIGR03469       223 RIGGIAAI-RGALIDDCTLAAAVKRSGGRIWL  253 (384)
T ss_pred             HcCCHHHH-hhCcccHHHHHHHHHHcCCcEEE
Confidence            87322111 122479999999885  444444

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=89.28  E-value=10  Score=33.40  Aligned_cols=123  Identities=14%  Similarity=0.133  Sum_probs=65.1

Q ss_pred             HHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCceEE-EEee--cC-cccccCC-------Cccccccccc----
Q 045376           57 FSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYI-GCMK--SG-PVLYQKG-------MKYHEPEYWK----  121 (244)
Q Consensus        57 ~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~-G~~~--~~-pv~~~~~-------~kwy~~~~~~----  121 (244)
                      .+.+.+....+|++..|+|+.+.++-|..++......+...+ |.+.  .+ .......       ..|.....|.    
T Consensus        75 ~N~g~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (299)
T cd02510          75 RIAGARAATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPE  154 (299)
T ss_pred             HHHHHHHccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCH
Confidence            334444456899999999999988777777665433333322 2221  00 0000000       0111000000    


Q ss_pred             ----cCCC-CCCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHH--HhcCCCeEecC
Q 045376          122 ----FGEE-GNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSW--FIGLDVEHVDD  179 (244)
Q Consensus       122 ----~~y~-~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~--l~~l~v~~~~~  179 (244)
                          ...+ .....++++|++.++++++...+---...+..+..||+-+..=  ..|..+..+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~  219 (299)
T cd02510         155 EERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPC  219 (299)
T ss_pred             HHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeec
Confidence                0000 1123456789999999999998865444555555799876544  46665544333

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=87.77  E-value=13  Score=30.06  Aligned_cols=154  Identities=12%  Similarity=0.003  Sum_probs=76.9

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCC-EEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHH
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQD-FLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALM   84 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~D-il~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~   84 (244)
                      .+.+++|-..+.+  + ....+++-.++++. +.......+ .......    ..+....+.+|++..|+|..+.++.|.
T Consensus        27 ~~eiiVvddgS~d--~-t~~~~~~~~~~~~~~~~~~~~~~~-~G~~~~~----n~g~~~~~g~~v~~ld~Dd~~~~~~l~   98 (214)
T cd04196          27 NDELIISDDGSTD--G-TVEIIKEYIDKDPFIIILIRNGKN-LGVARNF----ESLLQAADGDYVFFCDQDDIWLPDKLE   98 (214)
T ss_pred             CeEEEEEeCCCCC--C-cHHHHHHHHhcCCceEEEEeCCCC-ccHHHHH----HHHHHhCCCCEEEEECCCcccChhHHH
Confidence            4566666554442  2 22334444444432 333333222 2222222    223445689999999999999988888


Q ss_pred             HHHHc-cCC-CCceEEEEee----cCcccccCCCcccccccc--ccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCC
Q 045376           85 NALAN-HKS-KPRIYIGCMK----SGPVLYQKGMKYHEPEYW--KFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILH  156 (244)
Q Consensus        85 ~~L~~-~~~-~~~~y~G~~~----~~pv~~~~~~kwy~~~~~--~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~  156 (244)
                      +.+.. ... ...++.|.+.    .++....   ........  ...+..........|++.++.+++++.+....... 
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-  174 (214)
T cd04196          99 RLLKAFLKDDKPLLVYSDLELVDENGNPIGE---SFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELALPFPDAD-  174 (214)
T ss_pred             HHHHHHhcCCCceEEecCcEEECCCCCCccc---ccccccccCCccCHHHHHHhCccCCceeeEEHHHHHhhccccccc-
Confidence            87775 222 2234444331    1121110   00000000  00000001224457889999999998875433322 


Q ss_pred             CCCchhHHHHHHHhcC
Q 045376          157 TYANEDVSLGSWFIGL  172 (244)
Q Consensus       157 ~~~~EDV~iG~~l~~l  172 (244)
                       ...||..+...+...
T Consensus       175 -~~~~D~~~~~~~~~~  189 (214)
T cd04196         175 -VIMHDWWLALLASAF  189 (214)
T ss_pred             -cccchHHHHHHHHHc
Confidence             457888877766443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PRK11204 N-glycosyltransferase; Provisional

Probab=87.16  E-value=9.6  Score=35.33  Aligned_cols=146  Identities=16%  Similarity=0.248  Sum_probs=76.8

Q ss_pred             HHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCceEEEEeec
Q 045376           24 DKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKS  103 (244)
Q Consensus        24 ~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~~  103 (244)
                      .+.+++..+++..+..++..++   .. |. ..++.+.+..+.+|++..|+|+.+.++.|.+.+......++  +|.+..
T Consensus        98 ~~~l~~~~~~~~~v~~i~~~~n---~G-ka-~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~--v~~v~g  170 (420)
T PRK11204         98 GEILDRLAAQIPRLRVIHLAEN---QG-KA-NALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPR--VGAVTG  170 (420)
T ss_pred             HHHHHHHHHhCCcEEEEEcCCC---CC-HH-HHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCC--eEEEEC
Confidence            3445555556666665554332   22 43 23455555568899999999999999988887766533333  233322


Q ss_pred             CcccccCCC---ccccccccc-cCC---CCC--CCCCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHh--cC
Q 045376          104 GPVLYQKGM---KYHEPEYWK-FGE---EGN--NYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFI--GL  172 (244)
Q Consensus       104 ~pv~~~~~~---kwy~~~~~~-~~y---~~~--~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~--~l  172 (244)
                      .+...++.+   +....++.. ++.   ...  ..+...+|++.+++++++..+---   -.....||+-++.-+.  |.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~vgg~---~~~~~~ED~~l~~rl~~~G~  247 (420)
T PRK11204        171 NPRIRNRSTLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHEVGYW---STDMITEDIDISWKLQLRGW  247 (420)
T ss_pred             CceeccchhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHHhCCC---CCCcccchHHHHHHHHHcCC
Confidence            121111110   000000000 000   000  112234788899999998876321   1223479999988884  44


Q ss_pred             CCeEecC
Q 045376          173 DVEHVDD  179 (244)
Q Consensus       173 ~v~~~~~  179 (244)
                      .+...++
T Consensus       248 ~i~~~p~  254 (420)
T PRK11204        248 DIRYEPR  254 (420)
T ss_pred             eEEeccc
Confidence            4444433

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=84.38  E-value=9.9  Score=30.35  Aligned_cols=136  Identities=12%  Similarity=0.057  Sum_probs=71.8

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHH
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMN   85 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~   85 (244)
                      .+.++.|-+.+.+  + ....++...+++..+..+.....+.    |. .+++.+.+....+|++.+|+|....++.|..
T Consensus        29 ~~eiivvdd~s~d--~-t~~~~~~~~~~~~~i~~i~~~~n~G----~~-~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~  100 (181)
T cd04187          29 DYEIIFVDDGSTD--R-TLEILRELAARDPRVKVIRLSRNFG----QQ-AALLAGLDHARGDAVITMDADLQDPPELIPE  100 (181)
T ss_pred             CeEEEEEeCCCCc--c-HHHHHHHHHhhCCCEEEEEecCCCC----cH-HHHHHHHHhcCCCEEEEEeCCCCCCHHHHHH
Confidence            4566666555542  2 2233444445566666665544322    21 2334444444569999999999998877777


Q ss_pred             HHHccCCCCceEEEEeec--CcccccCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHHHcC
Q 045376           86 ALANHKSKPRIYIGCMKS--GPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYISFNS  152 (244)
Q Consensus        86 ~L~~~~~~~~~y~G~~~~--~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~  152 (244)
                      .+....+...+.+|....  .+....-..+.+....   ........+...|+..++++++++.+..-.
T Consensus       101 l~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~r~~~~~i~~~d  166 (181)
T cd04187         101 MLAKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLI---NKLSGVDIPDNGGDFRLMDRKVVDALLLLP  166 (181)
T ss_pred             HHHHHhCCCcEEEEEecCCcchHHHHHHHHHHHHHH---HHHcCCCCCCCCCCEEEEcHHHHHHHHhcC
Confidence            776644444566665431  1110000001110000   000112334467888999999999886543

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=84.01  E-value=21  Score=28.90  Aligned_cols=102  Identities=17%  Similarity=0.119  Sum_probs=59.4

Q ss_pred             HHHHHHHHHhhhCCCccEEEEecCceEecHHHHHHHHHccC-CCCceEEEEeecCcccccCCCccccccccccCCCCCCC
Q 045376           51 TKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHK-SKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNY  129 (244)
Q Consensus        51 ~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~-~~~~~y~G~~~~~pv~~~~~~kwy~~~~~~~~y~~~~y  129 (244)
                      .-.-.+++++. ..+.+|++..|+|..+..+.|...+.... +.-.+..|...      ...              +   
T Consensus        66 ~~~n~~~~~a~-~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~------~~~--------------~---  121 (202)
T cd04185          66 GGFYEGVRRAY-ELGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVL------DPD--------------G---  121 (202)
T ss_pred             hHHHHHHHHHh-ccCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeE------cCC--------------C---
Confidence            33445566666 56889999999999999887777665543 11112222110      000              0   


Q ss_pred             CCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHh--cCCCeEecCCCc
Q 045376          130 FMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFI--GLDVEHVDDRSM  182 (244)
Q Consensus       130 p~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~--~l~v~~~~~~~f  182 (244)
                          .+++.++++++++.+--...... ...||+.++.-+.  |..+ ......+
T Consensus       122 ----~~~~~~~~~~~~~~~g~~~~~~~-~~~eD~~~~~r~~~~G~~i-~~~~~~~  170 (202)
T cd04185         122 ----SFVGVLISRRVVEKIGLPDKEFF-IWGDDTEYTLRASKAGPGI-YVPDAVV  170 (202)
T ss_pred             ----ceEEEEEeHHHHHHhCCCChhhh-ccchHHHHHHHHHHcCCcE-EecceEE
Confidence                23557899988887732222222 3469999888774  5445 4333333

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=83.23  E-value=2.6  Score=34.95  Aligned_cols=28  Identities=18%  Similarity=0.043  Sum_probs=21.4

Q ss_pred             ccccccccCHHHHHHHHHcCCCCCCCCch
Q 045376          133 ATGQIYAISKDLAAYISFNSPILHTYANE  161 (244)
Q Consensus       133 ~~G~~YvlS~dlv~~i~~~~~~~~~~~~E  161 (244)
                      ++.+||+||+..|+.|.+....+. ++.|
T Consensus       170 ~~t~aY~Is~~gA~kLL~~~~~~~-~pvD  197 (200)
T PF01755_consen  170 YGTCAYLISRKGARKLLEASKPIR-LPVD  197 (200)
T ss_pred             CcceeeeeCHHHHHHHHHhCcCCC-ccCc
Confidence            456899999999999998875544 4444

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=82.36  E-value=1.4  Score=38.82  Aligned_cols=51  Identities=18%  Similarity=0.108  Sum_probs=38.1

Q ss_pred             cccccccCHHHHHHHHHcCC----CCCCCCchhHHHHHHHhcCCCeEecCCCccc
Q 045376          134 TGQIYAISKDLAAYISFNSP----ILHTYANEDVSLGSWFIGLDVEHVDDRSMCC  184 (244)
Q Consensus       134 ~G~~YvlS~dlv~~i~~~~~----~~~~~~~EDV~iG~~l~~l~v~~~~~~~f~~  184 (244)
                      +|+|++||..+|+.|.+...    ..+.+.--|--|..|+..++|.....++|..
T Consensus        12 GGgG~~iS~pLa~~L~~~~d~C~~r~~~~~g~D~~i~~C~~~lgv~LT~e~g~hQ   66 (255)
T PF04646_consen   12 GGGGFAISYPLAKALAKMQDDCIERYPHLYGGDQRIQACIAELGVPLTKEPGFHQ   66 (255)
T ss_pred             cCceeEEcHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHhCCCceecCCcee
Confidence            89999999999999987632    2344445788899999767766555666654

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=81.92  E-value=9  Score=30.40  Aligned_cols=96  Identities=11%  Similarity=0.045  Sum_probs=56.1

Q ss_pred             HHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCceEEEEeecCcccccCCCccccccccccCCCCCCCCCCcccc
Q 045376           57 FSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQ  136 (244)
Q Consensus        57 ~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~~~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~  136 (244)
                      ++.+.+....+|++..|+|..+.++-|.+.+....+ .....|...    ..+..                .-.....|+
T Consensus        71 ~n~g~~~a~g~~i~~lD~D~~~~~~~l~~~~~~~~~-~~~v~g~~~----~~~~~----------------~~~~~~~~~  129 (182)
T cd06420          71 RNKAIAAAKGDYLIFIDGDCIPHPDFIADHIELAEP-GVFLSGSRV----LLNEK----------------LTERGIRGC  129 (182)
T ss_pred             HHHHHHHhcCCEEEEEcCCcccCHHHHHHHHHHhCC-CcEEeccee----ecccc----------------cceeEeccc
Confidence            344555567899999999999998888777766522 222233211    00000                000223577


Q ss_pred             ccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHhcCC
Q 045376          137 IYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLD  173 (244)
Q Consensus       137 ~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~~l~  173 (244)
                      .+++.+..+..+.--......+..||+-++.=+...+
T Consensus       130 ~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g  166 (182)
T cd06420         130 NMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSG  166 (182)
T ss_pred             eEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcC
Confidence            7788888777543333333334579998887774444

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=81.83  E-value=28  Score=28.82  Aligned_cols=146  Identities=15%  Similarity=0.047  Sum_probs=71.7

Q ss_pred             CCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHHHH---HccCCCCce-EEEEeecCccccc
Q 045376           34 HQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNAL---ANHKSKPRI-YIGCMKSGPVLYQ  109 (244)
Q Consensus        34 ~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L---~~~~~~~~~-y~G~~~~~pv~~~  109 (244)
                      ...+..+....+.. ...-.-.+++.+... +++|++..|+|+.+.++.|...+   ......+.+ .+|..........
T Consensus        46 ~~~i~~i~~~~n~G-~~~a~N~g~~~a~~~-~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (237)
T cd02526          46 SEKIELIHLGENLG-IAKALNIGIKAALEN-GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGE  123 (237)
T ss_pred             CCcEEEEECCCcee-hHHhhhHHHHHHHhC-CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCe
Confidence            34555555444322 444444566665543 78999999999999988888875   322222322 2233210000000


Q ss_pred             CCCccccccc----cccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHh--cCCCeEecCCCc
Q 045376          110 KGMKYHEPEY----WKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFI--GLDVEHVDDRSM  182 (244)
Q Consensus       110 ~~~kwy~~~~----~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~--~l~v~~~~~~~f  182 (244)
                      ....+.....    .........-..++.|++.++++++.+.+---...+ .+..||+.++.-+.  |..+....+...
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~-~~~~eD~d~~~r~~~~G~~~~~~~~~~v  201 (237)
T cd02526         124 NSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKVGGFDEDL-FIDYVDTEWCLRARSKGYKIYVVPDAVL  201 (237)
T ss_pred             eccceeccCccceecccccCCceEeeeeeccceEEcHHHHHHhCCCCHHH-cCccchHHHHHHHHHcCCcEEEEcCeEE
Confidence            0000000000    000000001123345778889999888874322222 23468999888774  444444444333

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=81.41  E-value=15  Score=33.84  Aligned_cols=165  Identities=15%  Similarity=0.102  Sum_probs=91.3

Q ss_pred             eEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHHH
Q 045376            7 IVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNA   86 (244)
Q Consensus         7 v~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~   86 (244)
                      ..+..|...+.   ++.-+.+.+-.++++..+.+...   .+-...-...+.++....+.++++..|-|+.+..+.|.+.
T Consensus        85 ~evivv~d~~~---d~~~~~~~~~~~~~~~~~~~~~~---~~~~~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~  158 (439)
T COG1215          85 YEVIVVDDGST---DETYEILEELGAEYGPNFRVIYP---EKKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALREL  158 (439)
T ss_pred             ceEEEECCCCC---hhHHHHHHHHHhhcCcceEEEec---cccCccchHHHHHHHhhcCCCEEEEEcCCCCCChhHHHHH
Confidence            45566665443   23334455556666544444422   1112222345667776667999999999999999999998


Q ss_pred             HHccCCCCce-EEEEee--cCcccccCCCcccccccc-----ccCCC-CCCCCCCccccccccCHHHHHHHHHcCCCCCC
Q 045376           87 LANHKSKPRI-YIGCMK--SGPVLYQKGMKYHEPEYW-----KFGEE-GNNYFMHATGQIYAISKDLAAYISFNSPILHT  157 (244)
Q Consensus        87 L~~~~~~~~~-y~G~~~--~~pv~~~~~~kwy~~~~~-----~~~y~-~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~  157 (244)
                      +......+.. ..|...  .++.......+-..-++.     ..... .......+.|++.++.+++++.+-   .....
T Consensus       159 ~~~f~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~g---~~~~~  235 (439)
T COG1215         159 VSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEEVG---GWLED  235 (439)
T ss_pred             HhhhcCCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHhC---CCCCC
Confidence            8876544333 333221  111000000000000000     00000 112467789999999999998886   23344


Q ss_pred             CCchhHHHHHHHh--cCCCeEecCC
Q 045376          158 YANEDVSLGSWFI--GLDVEHVDDR  180 (244)
Q Consensus       158 ~~~EDV~iG~~l~--~l~v~~~~~~  180 (244)
                      .--||..+|..+.  |..+..+++.
T Consensus       236 ~i~ED~~lt~~l~~~G~~~~~~~~~  260 (439)
T COG1215         236 TITEDADLTLRLHLRGYRVVYVPEA  260 (439)
T ss_pred             ceeccHHHHHHHHHCCCeEEEeecc
Confidence            4579999999995  4455555443

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=81.36  E-value=13  Score=29.50  Aligned_cols=111  Identities=13%  Similarity=0.015  Sum_probs=60.2

Q ss_pred             HHHHhhhCCCccEEEEecCceEecHHHHHHHHHcc--CCCCceEEEEee--cCcccccCCCccccccccccCCCCCCCCC
Q 045376           56 YFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANH--KSKPRIYIGCMK--SGPVLYQKGMKYHEPEYWKFGEEGNNYFM  131 (244)
Q Consensus        56 ~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~--~~~~~~y~G~~~--~~pv~~~~~~kwy~~~~~~~~y~~~~yp~  131 (244)
                      .++.+.+..+.+|++..|+|..+..+.+...+...  .+...+..|...  .+... ....+..... .   ...-....
T Consensus        66 a~n~~~~~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~-~~~~~~~~~~-~---~~~~~~~~  140 (202)
T cd06433          66 AMNKGIALATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGR-VIGRRRPPPF-L---DKFLLYGM  140 (202)
T ss_pred             HHHHHHHHcCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCC-cccCCCCcch-h---hhHHhhcC
Confidence            34445554578999999999999988888877333  223345555532  11110 0011100011 0   00112234


Q ss_pred             CccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHhcCC
Q 045376          132 HATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFIGLD  173 (244)
Q Consensus       132 y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~~l~  173 (244)
                      +..|++.++++++.+.+-.-...+  ...||.-+..-+...+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~f~~~~--~~~~D~~~~~r~~~~g  180 (202)
T cd06433         141 PICHQATFFRRSLFEKYGGFDESY--RIAADYDLLLRLLLAG  180 (202)
T ss_pred             cccCcceEEEHHHHHHhCCCchhh--CchhhHHHHHHHHHcC
Confidence            456788899999998874322222  2357877766664443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=80.41  E-value=20  Score=28.85  Aligned_cols=116  Identities=11%  Similarity=0.027  Sum_probs=60.2

Q ss_pred             HHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCC--ceEEEEeec--CcccccCCCcccccccc--ccCCCCCCCC
Q 045376           57 FSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKP--RIYIGCMKS--GPVLYQKGMKYHEPEYW--KFGEEGNNYF  130 (244)
Q Consensus        57 ~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~--~~y~G~~~~--~pv~~~~~~kwy~~~~~--~~~y~~~~yp  130 (244)
                      ++.+.+..+.+|++..|+|..+.++.|...+......+  .+..|.+..  ..... ...+. .+...  ...+....- 
T Consensus        72 ~N~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-  148 (201)
T cd04195          72 LNEGLKHCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGND-IGKRR-LPTSHDDILKFARRRS-  148 (201)
T ss_pred             HHHHHHhcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCe-ecccc-CCCCHHHHHHHhccCC-
Confidence            44445545789999999999999888888777643222  244444321  11100 00000 11100  000100011 


Q ss_pred             CCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHh--cCCCeEecC
Q 045376          131 MHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFI--GLDVEHVDD  179 (244)
Q Consensus       131 ~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~--~l~v~~~~~  179 (244)
                      + ..|++.++.++++..+-.   .-.....||..+..-+.  |..+.++++
T Consensus       149 ~-~~~~~~~~rr~~~~~~g~---~~~~~~~eD~~~~~r~~~~g~~~~~~~~  195 (201)
T cd04195         149 P-FNHPTVMFRKSKVLAVGG---YQDLPLVEDYALWARMLANGARFANLPE  195 (201)
T ss_pred             C-CCChHHhhhHHHHHHcCC---cCCCCCchHHHHHHHHHHcCCceecccH
Confidence            1 245667777777665422   11225699999888874  555555443

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	244
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score = 45.1 bits (106), Expect = 6e-06
 Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 14/153 (9%)

Query: 24  DKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGAL 83
           D+ +      H    + +    +  LS K    F   F +    ++  VDDD +VN  AL
Sbjct: 53  DERLQERLGPHLVVTQCSAEHSHPALSCKMAAEFDA-FLVSGLRWFCHVDDDNYVNPKAL 111

Query: 84  MNALANHKSKPRIYIGCMKSGPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKD 143
           +  L        +Y+G       ++   ++  +            ++    G  + I++ 
Sbjct: 112 LQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKL------VRFWFATGGAGFCINRQ 165

Query: 144 LAAYIS-------FNSPILHTYANEDVSLGSWF 169
           LA  +        F          +D ++G   
Sbjct: 166 LALKMVPWASGSHFVDTSALIRLPDDCTVGYII 198

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 5e-04
 Identities = 33/255 (12%), Positives = 69/255 (27%), Gaps = 71/255 (27%)

Query: 1   MEKEKGIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTA 60
           + K++ +V +FV         VL          +  FL   +    ++ S  T+ Y    
Sbjct: 72  LSKQEEMVQKFV-------EEVLRI--------NYKFLMSPIKTEQRQPSMMTRMYIEQR 116

Query: 61  FSIW-DAEFYIKVDDDVHVN----LGALMNALANHKSKPRIYI----GCMKSGPVLYQKG 111
             ++ D + + K     +V+       L  AL   +    + I    G  K+   +    
Sbjct: 117 DRLYNDNQVFAK----YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT--WVALDV 170

Query: 112 MKYHEPE-------YW-KFGE--EGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANE 161
              ++ +       +W                   +Y I  +  +    +S I     + 
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 162 DVSLGSWFI------GLDVEHVDDRSMCCGTPPDCEWKAKEGSVCVASFDWPC------- 208
              L            L V  + +              AK       +F+  C       
Sbjct: 231 QAELRRLLKSKPYENCLLV--LLN-----------VQNAK----AWNAFNLSCKILLTTR 273

Query: 209 -SGICNAVERMKEVH 222
              + + +      H
Sbjct: 274 FKQVTDFLSAATTTH 288

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	244
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.79
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	92.78
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	89.46
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	87.42
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	86.15
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	86.01
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	82.89

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.79  E-value=6.6e-19  Score=155.66  Aligned_cols=142  Identities=17%  Similarity=0.167  Sum_probs=98.6

Q ss_pred             CCCEEEeccc--ccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCceEEEEee-cCcccccC
Q 045376           34 HQDFLRLNLI--EGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGCMK-SGPVLYQK  110 (244)
Q Consensus        34 ~~Dil~~d~~--D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~~~-~~pv~~~~  110 (244)
                      .+++++.++.  .++.+++.|+...+++.. +++++|++|+|||+||++++|+++|....+.+++|+|... .+|++   
T Consensus        61 ~~~~~~~~~~~~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---  136 (280)
T 2j0a_A           61 GPHLVVTQCSAEHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---  136 (280)
T ss_dssp             GGGEEECCC-------CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC--------
T ss_pred             cccceeccccccccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---
Confidence            4568887764  467889999999998654 3699999999999999999999999998888899999864 34443   


Q ss_pred             CCccccccccccCCCCCCCCCCc-cccccccCHHHHHHHHHcCCCC-------CCCCchhHHHHHHHh-cCCCeEecCCC
Q 045376          111 GMKYHEPEYWKFGEEGNNYFMHA-TGQIYAISKDLAAYISFNSPIL-------HTYANEDVSLGSWFI-GLDVEHVDDRS  181 (244)
Q Consensus       111 ~~kwy~~~~~~~~y~~~~yp~y~-~G~~YvlS~dlv~~i~~~~~~~-------~~~~~EDV~iG~~l~-~l~v~~~~~~~  181 (244)
                       .+++++...   ++...| +|| +|+||+||+++++.|+.....-       .....||++||+|+. .++|...+.++
T Consensus       137 -~~~~~~~~~---~~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~  211 (280)
T 2j0a_A          137 -ASELQSKQR---TKLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPL  211 (280)
T ss_dssp             ------------------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTT
T ss_pred             -ccccCcccc---cccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceeccc
Confidence             134444321   112234 466 5789999999999998743221       223479999999998 99999998888


Q ss_pred             ccc
Q 045376          182 MCC  184 (244)
Q Consensus       182 f~~  184 (244)
                      |..
T Consensus       212 Fh~  214 (280)
T 2j0a_A          212 FHS  214 (280)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            875

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=92.78  E-value=0.92  Score=41.32  Aligned_cols=162  Identities=14%  Similarity=0.124  Sum_probs=82.4

Q ss_pred             EEEEEeeeCCCCCchhHHHHHHHHhhCC-CEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHHH
Q 045376            8 VIRFVIGHSAKPGGVLDKGIDAEDAEHQ-DFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNA   86 (244)
Q Consensus         8 ~v~FvlG~~~~~~~~~~~~l~~E~~~~~-Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~   86 (244)
                      .++.|-..+.  ++...+.|++-.+.+. .+..+...+... +.    .+...+.+....+|++..|+|+.+.++-|..+
T Consensus        63 EIIvVDd~S~--d~~t~~~l~~~~~~~~~~v~vi~~~~n~G-~~----~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~l  135 (472)
T 1xhb_A           63 EIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRSG-LI----RARLKGAAVSRGQVITFLDAHCECTAGWLEPL  135 (472)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCCC-HH----HHHHHHHHHCCSSEEEEEESSEEECTTCHHHH
T ss_pred             EEEEEECCCC--cHHHHHHHHHHHHHCCCcEEEEECCCCCC-hH----HHHHHHHHhccCCeEEEECCCeEeCccHHHHH
Confidence            4444443333  2223344555556666 465555544322 22    23333444446899999999999998777766


Q ss_pred             HHccCCCCc-eEEEEee--c-CcccccCCC-------ccccccccc--------cCC---CCCCCCCCccccccccCHHH
Q 045376           87 LANHKSKPR-IYIGCMK--S-GPVLYQKGM-------KYHEPEYWK--------FGE---EGNNYFMHATGQIYAISKDL  144 (244)
Q Consensus        87 L~~~~~~~~-~y~G~~~--~-~pv~~~~~~-------kwy~~~~~~--------~~y---~~~~yp~y~~G~~YvlS~dl  144 (244)
                      +......+. +..|.+.  . .........       .|.....|.        ...   ......+++.|+.+++++++
T Consensus       136 l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  215 (472)
T 1xhb_A          136 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY  215 (472)
T ss_dssp             HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred             HHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHH
Confidence            665432233 3333321  1 111000000       111110000        000   00223356789999999999


Q ss_pred             HHHHHHcCCCCCCCCchhHHHHHHH--hcCCCeE
Q 045376          145 AAYISFNSPILHTYANEDVSLGSWF--IGLDVEH  176 (244)
Q Consensus       145 v~~i~~~~~~~~~~~~EDV~iG~~l--~~l~v~~  176 (244)
                      ...+---...+..+..||+-++.-+  .|..+..
T Consensus       216 ~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~  249 (472)
T 1xhb_A          216 FQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEI  249 (472)
T ss_dssp             HHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEE
T ss_pred             HHHcCCCCCcccccCchhHHHHHHHHhcCCeEEE
Confidence            9887544444445557887776555  5554443

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=89.46  E-value=5.4  Score=37.51  Aligned_cols=146  Identities=11%  Similarity=0.029  Sum_probs=74.0

Q ss_pred             HHHHHHHHhhCCCEEEecccccCCchhHHHHHHHHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCceEEEE-ee
Q 045376           24 DKGIDAEDAEHQDFLRLNLIEGYKKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIGC-MK  102 (244)
Q Consensus        24 ~~~l~~E~~~~~Dil~~d~~D~y~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G~-~~  102 (244)
                      .+.|++..+.+..|..+...+. ..+..-...+++.    ...+|++..|+|+.+.++-|..++......+...+|. +.
T Consensus       160 ~~~l~~~~~~~~~v~vi~~~~n-~G~~~A~N~G~~~----A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~  234 (570)
T 2d7i_A          160 KKPLEDYMALFPSVRILRTKKR-EGLIRTRMLGASV----ATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMID  234 (570)
T ss_dssp             THHHHHHHTTSTTEEEEECSSC-CCHHHHHHHHHHH----CCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEE
T ss_pred             HHHHHHHHHhCCeEEEEECCCC-CCHHHHHHHHHHh----cCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeee
Confidence            3445555556666655544333 2233333333333    4679999999999998766665555432233333332 21


Q ss_pred             --cC-ccc-ccC-C------Ccccccccc-------ccCC-CCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhH
Q 045376          103 --SG-PVL-YQK-G------MKYHEPEYW-------KFGE-EGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDV  163 (244)
Q Consensus       103 --~~-pv~-~~~-~------~kwy~~~~~-------~~~y-~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV  163 (244)
                        .+ ... ... .      ..|.....+       .+.. ....-.+++.|++.++++++...|---...+..+..||+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~  314 (570)
T 2d7i_A          235 VIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQY  314 (570)
T ss_dssp             EECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHH
T ss_pred             ccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchH
Confidence              11 100 000 0      001100000       0000 001123457899999999999988544444444447998


Q ss_pred             HHHHHH--hcCCC
Q 045376          164 SLGSWF--IGLDV  174 (244)
Q Consensus       164 ~iG~~l--~~l~v  174 (244)
                      -+..-+  .|..+
T Consensus       315 dl~~Rl~~~G~~i  327 (570)
T 2d7i_A          315 EISFKVWMCGGRM  327 (570)
T ss_dssp             HHHHHHHHTTCEE
T ss_pred             HHHHHHHhCCCeE
Confidence            876655  45444

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=87.42  E-value=8.6  Score=35.18  Aligned_cols=121  Identities=11%  Similarity=0.088  Sum_probs=64.1

Q ss_pred             HHHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCceEEE-Eee--c-Ccccc-c------CCCccccccccc---
Q 045376           56 YFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPRIYIG-CMK--S-GPVLY-Q------KGMKYHEPEYWK---  121 (244)
Q Consensus        56 ~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~y~G-~~~--~-~pv~~-~------~~~kwy~~~~~~---  121 (244)
                      +...+.+....+|++..|+|+.+.++-|..++......+...++ .+.  . ..... .      ..-.|.....|.   
T Consensus       137 A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (501)
T 2ffu_A          137 SRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMT  216 (501)
T ss_dssp             HHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECC
T ss_pred             HHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCC
Confidence            33444444478999999999999987777666654322332333 221  1 00000 0      000011100000   


Q ss_pred             -------c-CCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHH--hcCCCeE
Q 045376          122 -------F-GEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWF--IGLDVEH  176 (244)
Q Consensus       122 -------~-~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l--~~l~v~~  176 (244)
                             . ........+++.|++.++++++...|-.-...+..+..||+-+..-+  .|..+..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~  281 (501)
T 2ffu_A          217 PEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEI  281 (501)
T ss_dssp             HHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEE
Confidence                   0 00011223567899999999999988544444445558998886555  5554443

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=86.15  E-value=12  Score=30.17  Aligned_cols=151  Identities=8%  Similarity=-0.065  Sum_probs=79.0

Q ss_pred             CeEEEEEeeeCCCCCchhHHHHHHHHhhCCCEEEecccccC-----CchhHHHHHHHHHhhhCCCccEEEEecCceEecH
Q 045376            6 GIVIRFVIGHSAKPGGVLDKGIDAEDAEHQDFLRLNLIEGY-----KKLSTKTKTYFSTAFSIWDAEFYIKVDDDVHVNL   80 (244)
Q Consensus         6 gv~v~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~y-----~nLt~Kt~~~~~wa~~~~~~~fvlK~DDD~fVn~   80 (244)
                      .+.++.|-..+.   +. ..++.++......|..+.....-     .|..  .-..++.+.+..+.+|++..|+|.++.+
T Consensus        30 ~~eiivvDd~S~---d~-t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--~~~a~N~gi~~a~g~~i~~lD~Dd~~~~  103 (255)
T 1qg8_A           30 DFELFIMDDNSN---EE-TLNVIRPFLNDNRVRFYQSDISGVKERTEKTR--YAALINQAIEMAEGEYITYATDDNIYMP  103 (255)
T ss_dssp             CEEEEEEECSCC---HH-HHHHHGGGGGSTTEEEEECCCCSHHHHHSSCH--HHHHHHHHHHHCCCSEEEEEETTEEECT
T ss_pred             ceEEEEEECCCC---ch-HHHHHHHHhhcCCEEEEecccccccccccccC--HHHHHHHHHHHcCCCEEEEeCCCCccCh
Confidence            455555554433   12 23444454445555554443110     1221  2334555555558899999999999998


Q ss_pred             HHHHHHHHccC--CCCceEEEEee----c--CcccccCCCccccccccccCCCCCCCCCCccccccccCHHHHHHHH-Hc
Q 045376           81 GALMNALANHK--SKPRIYIGCMK----S--GPVLYQKGMKYHEPEYWKFGEEGNNYFMHATGQIYAISKDLAAYIS-FN  151 (244)
Q Consensus        81 ~~L~~~L~~~~--~~~~~y~G~~~----~--~pv~~~~~~kwy~~~~~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~-~~  151 (244)
                      +.|...+....  +.-.+..|.+.    .  +...    ..+..+.. .  . ......+..|++.++.++++..+- .-
T Consensus       104 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~-~--~-~~~~~~~~~~~~~~~rr~~~~~~g~~f  175 (255)
T 1qg8_A          104 DRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAA-Q--V-TWNAPCAIDHCSVMHRYSVLEKVKEKF  175 (255)
T ss_dssp             THHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCC-S--C-BSCCTTTSCGGGEEEETHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchH-H--H-HHhhcCCCccceEEEEHHHHHhhcccc
Confidence            77776665442  22334444432    1  1111    01111111 0  0 112334567899999999999875 22


Q ss_pred             C----CCCCCCCchhHHHHHHHh
Q 045376          152 S----PILHTYANEDVSLGSWFI  170 (244)
Q Consensus       152 ~----~~~~~~~~EDV~iG~~l~  170 (244)
                      .    ........||..+..-+.
T Consensus       176 ~~~~~~~~~~~~~eD~~~~~r~~  198 (255)
T 1qg8_A          176 GSYWDESPAFYRIGDARFFWRVN  198 (255)
T ss_dssp             SSSSCCCGGGSTTHHHHHHHHHT
T ss_pred             cccccCCcccchHHHHHHHHHHH
Confidence            0    011224589988877664

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=86.01  E-value=15  Score=35.27  Aligned_cols=120  Identities=16%  Similarity=0.125  Sum_probs=65.8

Q ss_pred             HHHHHHhhhCCCccEEEEecCceEecHHHHHHHHHccC--CCCceEEEEee--cCcccccCCCccccc---------cc-
Q 045376           54 KTYFSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHK--SKPRIYIGCMK--SGPVLYQKGMKYHEP---------EY-  119 (244)
Q Consensus        54 ~~~~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~--~~~~~y~G~~~--~~pv~~~~~~kwy~~---------~~-  119 (244)
                      -.+++.|....+++|++..|||+.+.++.|...+....  +...+..|.+.  ..+-.....+.+...         .. 
T Consensus       257 N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  336 (657)
T 4fix_A          257 SRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAE  336 (657)
T ss_dssp             HHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCC
T ss_pred             HHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccccccc
Confidence            34666666544789999999999999887777665432  22223334442  111000000111100         00 


Q ss_pred             c--cc-------------CCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHh--cCCCe
Q 045376          120 W--KF-------------GEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFI--GLDVE  175 (244)
Q Consensus       120 ~--~~-------------~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~--~l~v~  175 (244)
                      +  .|             .+.......|++|++.++.+++++.+---..  -.+..||+-++.=+.  |..+-
T Consensus       337 ~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G~ki~  407 (657)
T 4fix_A          337 YDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHGYPTV  407 (657)
T ss_dssp             SCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTTCCEE
T ss_pred             ccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcCCeEE
Confidence            0  00             0111223457899999999999998743221  123469999987764  44443

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=82.89  E-value=11  Score=35.23  Aligned_cols=39  Identities=15%  Similarity=0.169  Sum_probs=28.7

Q ss_pred             CccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 045376          132 HATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWFI  170 (244)
Q Consensus       132 y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l~  170 (244)
                      ++.|++.+++++++..+---...+..+..||.-++.=+.
T Consensus       275 ~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~  313 (625)
T 2z86_A          275 FFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLY  313 (625)
T ss_dssp             GCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHH
T ss_pred             EEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHH
Confidence            478999999999999884333344444579999887774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	244
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	89.63
d1omza_	265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	80.52

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.63  E-value=0.99  Score=36.63  Aligned_cols=118  Identities=14%  Similarity=0.150  Sum_probs=61.4

Q ss_pred             HHHhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCc-eEEEEee--cC---------cccccC-----CCccc-ccc
Q 045376           57 FSTAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPR-IYIGCMK--SG---------PVLYQK-----GMKYH-EPE  118 (244)
Q Consensus        57 ~~wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~-~y~G~~~--~~---------pv~~~~-----~~kwy-~~~  118 (244)
                      ...+.+..+.+|++.+|+|+.+.++-|...+......+. +..|.+.  .+         +..+..     ..+|. .+.
T Consensus        99 ~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (328)
T d1xhba2          99 RLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQ  178 (328)
T ss_dssp             HHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCH
T ss_pred             HHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccch
Confidence            344455457899999999999988776665543322222 2223221  10         000000     00111 110


Q ss_pred             c----cccCCCCCCCCCCccccccccCHHHHHHHHHcCCCCCCCCchhHHHHHHH--hcCCC
Q 045376          119 Y----WKFGEEGNNYFMHATGQIYAISKDLAAYISFNSPILHTYANEDVSLGSWF--IGLDV  174 (244)
Q Consensus       119 ~----~~~~y~~~~yp~y~~G~~YvlS~dlv~~i~~~~~~~~~~~~EDV~iG~~l--~~l~v  174 (244)
                      .    ....+......+++.|++.++++++...+---...+..+..||+-++.=+  .|..+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i  240 (328)
T d1xhba2         179 REMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTL  240 (328)
T ss_dssp             HHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEE
T ss_pred             hhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeE
Confidence            0    00001111223567899999999999987544444455557887776555  45433

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.52  E-value=3.8  Score=30.08  Aligned_cols=37  Identities=22%  Similarity=0.286  Sum_probs=28.6

Q ss_pred             HhhhCCCccEEEEecCceEecHHHHHHHHHccCCCCc
Q 045376           59 TAFSIWDAEFYIKVDDDVHVNLGALMNALANHKSKPR   95 (244)
Q Consensus        59 wa~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~   95 (244)
                      .+.+..+.+|++..|||..+.++.|.+.++.....+.
T Consensus        75 ~~~~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~  111 (265)
T d1omza_          75 QVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPD  111 (265)
T ss_dssp             SCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTT
T ss_pred             hhHHhCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCC
Confidence            3444457899999999999999988888877654443