Citrus Sinensis ID: 045431

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---
RQNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK
ccccccccccccccEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEccccccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHcccccEEEEcccccccccccccccccccccccccccccEEEEEEccccccccccccccccccEEEEccccccHcccccHHHHHHHHHHHHHccEEEEEEccccccccccccccccccccccCEEEEEccccccccccccEEEEEECcccccccccccHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccCECccccccEEEECcccccHHHHHHHHHHcccEEEccccccccccccEEEEEccccHHHHHHHHHHHHHHHc
********KRISVCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY*
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RQNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable LL-diaminopimelate aminotransferase, chloroplastic Required for lysine biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli.confidentQ10MQ2
LL-diaminopimelate aminotransferase, chloroplastic Required for lysine biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli. Not active with meso-diaminopimelate, lysine or ornithine as substrates.confidentQ93ZN9
LL-diaminopimelate aminotransferase Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli. Is also able to use meso-diaminopimelate, lysine or ornithine as substrates.probableQ6MDE0

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.6.-.-Transferring nitrogenous groups.probable
2.6.1.-Transaminases (aminotransferases).probable
2.6.1.83LL-diaminopimelate aminotransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3QGU, chain A
Confidence level:very confident
Coverage over the Query: 30-433
View the alignment between query and template
View the model in PyMOL