Citrus Sinensis ID: 045443


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
MGYHYSCNGLLLLVSVLMVVASSAVGSFYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHITFPLECSKMLNLLEFPSLKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCNNCGSKRSSSSSVSDAQRQWQPRDELDATSRRRLRWVQKYFMIYNYCTDLKRFPQGFLLSADNTS
cccccHHHHHHHHHHHHHHHccccccccccccccEEccccEEEEcccCEEEEEEccccccCEECccCEEEEEEEEEEEEEcccccEEEEEEEECccccccccccEEECcccccccEEEEEEEEEcccccCEEEEEcccccccccCEEEEEECccEEEEEEccCEEEEEccccccccccCEEEEEEcccccccccccCEECccccccEEEEEEEEEEECccccccccccccccccccccccccccccHHHHHHHHHHHHccEEEccccccccccccccccccccc
**YHYSCNGLLLLVSVLMVVASSAVGSFYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHITFPLECSKMLNLLEFPSLKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCNNCG*************RQWQ**DEL*ATSRRRLRWVQKYFMIYNYCTDLKRFPQGFLLSAD***
xxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGYHYSCNGLLLLVSVLMVVASSAVGSFYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHITFPLECSKMLNLLEFPSLKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCNNCGSKRSSSSSVSDAQRQWQPRDELDATSRRRLRWVQKYFMIYNYCTDLKRFPQGFLLSADNTS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Brassinosteroid-regulated protein BRU1 Possible role in brassinosteroid-stimulated elongation.confidentP35694
Probable xyloglucan endotransglucosylase/hydrolase protein 16 Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.probableQ8LG58
Probable xyloglucan endotransglucosylase/hydrolase protein Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.probableP93349

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1UMZ, chain A
Confidence level:very confident
Coverage over the Query: 23-282
View the alignment between query and template
View the model in PyMOL