Citrus Sinensis ID: 045444

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK

cccccccccccccccccccHHHHHHHHHccccccccccccccEEEEEEEEcccEEEEEEEEccccCECccccCEEEEEEEEEEEccccHHHHHHHcccccEEEEEcccccEEEEEcccccccccccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHccCEEEEEEccccccccccCEEEcccHHHHHHHHHHHHHcc

*********************RKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIG**********************************************HIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR****

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
40S ribosomal protein S8		confident	P49199
40S ribosomal protein S8		confident	Q08069
40S ribosomal protein S8-2		confident	Q9FIF3

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XZM, chain 2
Confidence level:very confident
Coverage over the Query: 2-128,143-216
View the alignment between query and template
View the model in PyMOL