Citrus Sinensis ID: 045447

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770------1780------1790------1800------1810------1820------1830------1840------1850------1860------1870------1880------1890------1900------1910------1920------1930------1940------1950------1960------1970------1980------1990------2000------2010------2020------2030------2040------2050------206

MPLFVSDEEMSRLSNDAAAVAAKADAYIRYLQTDFETVKARADAAAITAEQTCSLLEQKFISLQEEFSKVESQNAQLQKSLDDRVNELAEVQSQKHQLHLQLIGKDGEIERLTMEVAELHKSRRQLMELVEQKDLQHSEKGATIKAYLDKIINLTDNAAQREARLAETEAELARAQATCTRLTQGKELIERHNAWLNEELTSKVNSLVELRRTHADLEADMSAKLSDVERQFSECSSSLNWNKERVRELEIKLSSLQEEFCSSKDAAAANEERFSTELSTVNKLVELYKESSEEWSRKAGELEGVIKALETQLAQVQNDCKEKLEKEVSAREQLEKEAMDLKEKLEKCEAEIESSRKTNELNLLPLSSFSTETWMESFDTNNISEDNRLLVPKIPAGVSGTALAASLLRDGWSLAKIYAKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAGIILDERAEYERMVDAYSAINQKLQNFISEKSSLEKTIQELKADLRMRERDYYLAQKEISDLQKQVTVLLKECRDIQLRCGLSRIEFDDDAVAIADVELAPESDAEKIISEHLLTFKDINGLVEQNVQLRSLVRNLSDQIESREMEFKDKLELELKKHTDEAASKVAAVLDRAEEQGRMIESLHTSVAMYKRLYEEEHKLHSSHTQYIEAAPDGRKDLLLLLEGSQEATKRAQEKMAERVRCLEDDLGKARSEIIALRSERDKLALEAEFAREKLDSVMREAEHQKVEVNGVLARNVEFSQLVVDYQRKLRETSESLNAAQELSRKLAMEVSVLKHEKEMLSNAEQRAYDEVRSLSQRVYRLQASLDTIQNAEEVREEARAAERRKQEEYIKQVEREWAEAKKELQEERDNVRLLTSDREQTLKNAVKQVEEMGKELATALRAVASAETRAAVAETKLSDMEKRIRPLDAKGDEVDDGSRPSDEVQLQVGKEELEKLKEEAQANREHMLQYKSIAQVNEAALKEMETVHENFRTRVEGVKKSLEDELHSLRKRVSELERENILKSEEIASAAGVREDALASAREEITSLKEERSIKISQIVNLEVQVSALKEDLEKEHERRQAAQANYERQVILQSETIQELTKTSQALASLQEQASELRKLADALKAENSELKSKWELEKSVLEKLKNEAEEKYDEVNEQNKILHSRLEALHIQLTEKDGSSVRISSQSTDSNPIGDASLQSVISFLRNRKSIAETEVALLTTEKLRLQKQLESALKAAENAQASLTTERANSRAMLLTEEEIKSLKLQVRELNLLRESNVQLREENKYNFEECQKLREVAQKTKSDCDNLENLLRERQIEIEACKKEMEKQRMEKENLEKRVSELLQRCRNIDVEDYDRLKVEVRQMEEKLSGKNAEIEETRNLLSTKLDTISQLEQELANSRLELSEKEKRLSDISQAEAARKLEMEKQKRISAQLRRKCEMLSKEKEESIKENQSLARQLDDLKQGKKSTGDVTGEQVMKEKEEKDTRIQILERTVERQREELKKEKDDNQKEKEKRLKGEKVMLDSAKLADQWKTRISSELEQHKQAVKRLSDELEKLKHTEAGLPEGTSVVQLLSGTNLDDHASSYFSAVESFERVARSVIVELGTCGPSETSLALDAAAAAATTGSAVATLAPVTASSAGPGTIHLPVKATDGKERVNLPKTNAETRKPGRRLVRPRLKRPEESQGDMETSEAEGSNITGKVAASHDAETQGNLALQSQLSARKRPASTTTELREESLSQGEPSSDVPAPVLKKSKLPDSSSEDAGGQSASPLEDTQPTTEESVEAVGDLAQGSNEEAVEAEKEEVDNTGEKAEEMKESHQVDTTSEAELQNDKNDVLEENLDRPTGVEMACDDGSKDQAEQENQQLTLESESEREEGELLPDVTEVEGAADLSNVVGSPEIGELLPELVSTPVVSPGGNEDEAPASEEPQEAVNDEGDGTEENAEGLDKSNDGEEADQVPEGSVTTGETASTSSAIEPDISRQPSSSATTTEAKQASPPASNASHIVNLRERARERAMQRQAGAMPSTVIRGRGRPAGRGRGVRGGRSGRGQSPAQQ

ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHccccHHcccHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccHHccccccccHHcccccHHHHHHHHHHHHHHccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHHcccHHHHHcccccccccccccccccccHHHHHHHHHHcccccHHHccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccc

*PLFVSD***********AVAAKADAYIRYLQTDFETVKARADAAAITAEQTCSLLEQKFISL************************************LQLIGKDGEIERLT****************************ATIKAYLDKIINLTDNA*************LARAQATCTRLTQGKELIERHNAWLNEELTSKVNSLVEL*************************************************************************LVEL****************GVIKAL************************************************************************************IPAGVSGTALAASLLRDGWSLAKIYAKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAGIILDERAEYERMVDAYSAINQKLQNFIS********IQELKADLRMRERDYYLAQKEISDLQKQVTVLLKECRDIQLRC*********DAVAIA*******SDAEKIISEHLLTFKDINGLVEQNVQLRSLVRN***********************************************LHTSVAMYKRLYE************I*********LLLL*********************************I******************************KVEVNGVLARNVEFSQLVVDYQR************************************************************************************************************************************************************************************************************************************************************************************************ISQIVNLEVQ*****************************************************************************************************************************************VISFLRNRKSIAETEVALLTT******************************************LKLQVRELNLL**************F******************************************************LLQRCRNIDVEDYDRLK********************************************************************************************************************************************************************************************************************VVQLLSGTNLDDHASSYFSAVESFERV*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MPLFVSDEEMSRLSNDAAAVAAKADAYIRYLQTDFETVKARADAAAITAEQTCSLLEQKFISLQEEFSKVESQxxxxxxxxxxxxxxxxxxxxxKHQLHLQLIGKDGExxxxxxxxxxxxxxxxxxxxxVEQKDLQHSEKGATIKAYLDKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKELIERHNAWLNEELTSKVNSLVELRRTHADLEADMSAKLSDVERQFSECSSSxxxxxxxxxxxxxxxxxxxxxFCSSKDAAAANEERFSTELSTVNKLVELYKESSEEWSRKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNELNLLPLSSFSTETWMESFDTNNISEDNRLLVPKIPAGVSGTALAASLLRDGWSLAKIYAKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAGIILDERAEYERMVDAYSAINQKxxxxxxxxxxxxxxxxxxxxxxxxxxxxYYLAQKEISDLQKQVTVLLKECRDIQLRCGLSRIEFDDDAVAIADVELAPESDAEKIISEHLLTFKDxxxxxxxxxxxxxxxxxxxxxIESREMEFxxxxxxxxxxxxxxxxxxxxxVLDRAEEQGRMIESLHTSVAMYKRLYEEEHKLHSSHTQYIEAAPDGRKDLLLLLEGSQEATKRAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVNGVLARNVEFSQLxxxxxxxxxxxxxxxxxxxxxSRKLAMEVSVLKHEKEMLSNAEQRAYDEVRSLSQRVYRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVRLLTSDREQTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxIRPLDAKGDEVDDGSRPSDxxxxxxxxxxxxxxxxxxxxxxxxxxxxKSIAQVNEAALKEMETVHENFxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxIASAAGVREDALASAREEITSLKEERSIKISQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVILQSETIQExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLEALHIQLTEKDGSSVRISSQSTDSNPIGDASLQSVISFLRNRKSIAETEVALLTTExxxxxxxxxxxxxxxxxxxxxxxxxRANSRAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNKYNFEExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxEAARKLExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKKSTGDVTGEQVMKExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRLKGEKVMLDSAKLADQWxxxxxxxxxxxxxxxxxxxxxxxxxxxxEAGLPEGTSVVQLLSGTNLDDHASSYFSAVESFERVARSVIVELGTCGPSETSLALDAAAAAATTGSAVATLAPVTASSAGPGTIHLPVKATDGKERVNLPKTNAETRKPGRRLVRPRLKRPEESQGDMETSEAEGSNITGKVAASHDAETQGNLALQSQLSARKRPASTTTELREESLSQGEPSSDVPAPVLKKSKLPDSSSEDAGGQSASPLEDTQPTTEESVEAVGDLAQGSNEEAxxxxxxxxxxxxxxxxxxxxxHQVDTTSEAELQNDKNDVLEENLDRPTGVEMACDDGSxxxxxxxxxxxxxxxxxxxxxGELLPDVTEVEGAADLSNVVGSPEIGELLPELVSTPVVSPGGNEDEAPASEEPQEAVNDEGDGTEENAEGLDKSNDGEEADQVPEGSVTTGETASTSSAIEPDISRQPSSSATTTEAKQASPPASNASHIVNLRERARERAMQRQAGAMPSTVIRGRGRPAGRGRGVRGGRSGRGQSPAQQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Nuclear-pore anchor	Component of the nuclear pore complex. Acts as a docking site for activities required for desumoylation and mRNA export. Required for the proper expression or localization of a subset of miRNAs.	probable	A4GSN8

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1I84, chain S
Confidence level:very confident
Coverage over the Query: 343-353
View the alignment between query and template
View the model in PyMOL

Template: 2DFS, chain A
Confidence level:very confident
Coverage over the Query: 1305-1329
View the alignment between query and template
View the model in PyMOL

Template: 2V71, chain A
Confidence level:probable
Coverage over the Query: 952-1055
View the alignment between query and template
View the model in PyMOL

Template: 2FXO, chain A
Confidence level:probable
Coverage over the Query: 1379-1464
View the alignment between query and template
View the model in PyMOL

Template: 3NA7, chain A
Confidence level:probable
Coverage over the Query: 1286-1373
View the alignment between query and template
View the model in PyMOL

Template: 2YCU, chain A
Confidence level:probable
Coverage over the Query: 1392-1546
View the alignment between query and template
View the model in PyMOL

Template: 2V66, chain B
Confidence level:probable
Coverage over the Query: 57-86,104-148,159-167,182-203
View the alignment between query and template
View the model in PyMOL

Template: 3O0Z, chain A
Confidence level:probable
Coverage over the Query: 46-116,138-162
View the alignment between query and template
View the model in PyMOL

Template: 1SJJ, chain A
Confidence level:probable
Coverage over the Query: 945-1392
View the alignment between query and template
View the model in PyMOL

Template: 2ZUO, chain A
Confidence level:probable
Coverage over the Query: 652-716,730-934
View the alignment between query and template
View the model in PyMOL