Citrus Sinensis ID: 045542
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 269 | ||||||
| 224104303 | 346 | predicted protein [Populus trichocarpa] | 0.992 | 0.771 | 0.442 | 6e-59 | |
| 224107651 | 441 | predicted protein [Populus trichocarpa] | 0.992 | 0.605 | 0.436 | 3e-57 | |
| 224100077 | 439 | predicted protein [Populus trichocarpa] | 0.955 | 0.585 | 0.445 | 5e-54 | |
| 224107681 | 445 | predicted protein [Populus trichocarpa] | 0.966 | 0.584 | 0.452 | 2e-53 | |
| 255547900 | 441 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.981 | 0.598 | 0.435 | 2e-52 | |
| 9279609 | 455 | acetyltranferase-like protein [Arabidops | 0.962 | 0.569 | 0.409 | 2e-50 | |
| 15230978 | 442 | HXXXD-type acyl-transferase-like protein | 0.959 | 0.583 | 0.410 | 3e-50 | |
| 297814832 | 442 | transferase family protein [Arabidopsis | 0.959 | 0.583 | 0.400 | 3e-49 | |
| 255547850 | 441 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.959 | 0.585 | 0.424 | 3e-48 | |
| 255587965 | 287 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.921 | 0.864 | 0.408 | 2e-47 |
| >gi|224104303|ref|XP_002333962.1| predicted protein [Populus trichocarpa] gi|222839277|gb|EEE77614.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 179/298 (60%), Gaps = 31/298 (10%)
Query: 1 MAGELEIENISRETIKPSSPTPNHLRNFKLSFLDQIAPVMYTPIVLFYSQNG-DSDHPGE 59
M+ L IE + RETIKPSSPTP HLR+ KLS LDQ PV++ P++LFY +NG D+DH +
Sbjct: 1 MSVPLRIEIMQRETIKPSSPTPLHLRSLKLSLLDQFMPVVHIPLLLFYPRNGNDTDHLAK 60
Query: 60 AAKMCQCLKTSLSKILTLFYPFAGRFKDHASIECNDDGADFLEAQVICRLSDIPRQPNAN 119
A + LKTSLS+ LT FYPFAGR KD++SIEC+D GA+++EA++ C LSDI ++P+
Sbjct: 61 ATERSLLLKTSLSEALTHFYPFAGRLKDNSSIECDDHGAEYIEARIHCILSDILKKPDTE 120
Query: 120 NLRTFLPIEIESMEAVTNILLCVQASFFECGGMPI------------------------- 154
L+ LP + + L VQASFF+CGG+ I
Sbjct: 121 VLKQLLPAALSEAATARDSQLLVQASFFDCGGLAIGMNLSHKVADAATVTTFIKCWAATA 180
Query: 155 ---EVQIIPHPEFLTASVFPPKDPPMLPLPFPPGNCKTRTRRFVFTASKIAALKAKAAGA 211
+++ P F+ AS+FP D P+ LP ++ +RFVF A KI ALKAKA A
Sbjct: 181 RRSSTEVVISPVFMGASIFPQMDLPIPMLPVDLIQGESVMKRFVFEAPKITALKAKAISA 240
Query: 212 CVQQPSRVEAVTLLIWKCSMIAISKTTVRGCPRLSQATHAVNLRKWTRRPMAANCVGN 269
V P+RVE+VT LIWKC+M A S++ + G PR S + +VN+RK + N GN
Sbjct: 241 SVPDPTRVESVTALIWKCAMSA-SRSNL-GVPRKSVLSLSVNMRKRLVPTLPDNYGGN 296
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224107651|ref|XP_002314550.1| predicted protein [Populus trichocarpa] gi|222863590|gb|EEF00721.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224100077|ref|XP_002311734.1| predicted protein [Populus trichocarpa] gi|222851554|gb|EEE89101.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224107681|ref|XP_002314561.1| predicted protein [Populus trichocarpa] gi|222863601|gb|EEF00732.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255547900|ref|XP_002515007.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223546058|gb|EEF47561.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|9279609|dbj|BAB01067.1| acetyltranferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|15230978|ref|NP_189233.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] gi|332643586|gb|AEE77107.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297814832|ref|XP_002875299.1| transferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297321137|gb|EFH51558.1| transferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|255547850|ref|XP_002514982.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223546033|gb|EEF47536.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255587965|ref|XP_002534455.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223525254|gb|EEF27926.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 269 | ||||||
| TAIR|locus:2092090 | 442 | AT3G26040 [Arabidopsis thalian | 0.553 | 0.337 | 0.512 | 2.9e-46 | |
| TAIR|locus:2024061 | 436 | AT1G24420 [Arabidopsis thalian | 0.565 | 0.348 | 0.431 | 1.2e-34 | |
| TAIR|locus:2130065 | 446 | AT4G15390 [Arabidopsis thalian | 0.591 | 0.356 | 0.408 | 5.9e-34 | |
| TAIR|locus:2102936 | 443 | AT3G30280 [Arabidopsis thalian | 0.539 | 0.327 | 0.441 | 1.3e-32 | |
| TAIR|locus:2152783 | 426 | AT5G47950 [Arabidopsis thalian | 0.531 | 0.335 | 0.410 | 2.4e-29 | |
| TAIR|locus:2024036 | 435 | AT1G24430 [Arabidopsis thalian | 0.535 | 0.331 | 0.4 | 1.4e-27 | |
| TAIR|locus:2152763 | 443 | AT5G47980 [Arabidopsis thalian | 0.550 | 0.334 | 0.370 | 2.9e-24 | |
| TAIR|locus:2178667 | 428 | AT5G23970 [Arabidopsis thalian | 0.535 | 0.336 | 0.380 | 3.8e-24 | |
| TAIR|locus:2130075 | 435 | BIA1 "BRASSINOSTEROID INACTIVA | 0.546 | 0.337 | 0.358 | 1.4e-21 | |
| TAIR|locus:2059109 | 451 | SHT "spermidine hydroxycinnamo | 0.513 | 0.305 | 0.3 | 7.7e-13 |
| TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 383 (139.9 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 79/154 (51%), Positives = 109/154 (70%)
Query: 5 LEIENISRETIKPSSPTPNHLRNFKLSFLDQIAPVMYTPIVLFYSQNGDSDHPGEAAKMC 64
+ ++ +SR+ IKPSSPTPNHL+ FKLS L+Q+ P ++ P+V FYS N +S P E +M
Sbjct: 1 MRVDVVSRDIIKPSSPTPNHLKKFKLSLLEQLGPTIFGPMVFFYSAN-NSIKPTEQLQM- 58
Query: 65 QCLKTSLSKILTLFYPFAGRFKDHASIECNDDGADFLEAQVICRLSDIPRQPNANNLRTF 124
LK SLS+ LT FYP AGR K + SI+CND GADFLEA+V LS++ +P++++L+
Sbjct: 59 --LKKSLSETLTHFYPLAGRLKGNISIDCNDSGADFLEARVNSPLSNLLLEPSSDSLQQL 116
Query: 125 LPIEIESMEAVTNILLCVQASFFECGGMPIEVQI 158
+P ++S+E T +LL QASFFECG M I V I
Sbjct: 117 IPTSVDSIETRTRLLLA-QASFFECGSMSIGVCI 149
|
|
| TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2059109 SHT "spermidine hydroxycinnamoyl transferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pg.C_scaffold_887000001 | hypothetical protein (346 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 269 | |||
| PLN00140 | 444 | PLN00140, PLN00140, alcohol acetyltransferase fami | 2e-57 | |
| pfam02458 | 432 | pfam02458, Transferase, Transferase family | 5e-42 | |
| PLN02481 | 436 | PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul | 4e-16 | |
| PLN03157 | 447 | PLN03157, PLN03157, spermidine hydroxycinnamoyl tr | 1e-15 | |
| PLN02663 | 431 | PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate | 6e-14 |
| >gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 2e-57
Identities = 104/301 (34%), Positives = 151/301 (50%), Gaps = 41/301 (13%)
Query: 5 LEIENISRETIKPSSPTPNHLRNFKLSFLDQIAPVMYTPIVLFYSQNGDSDHPGEAAKMC 64
+E+ ISRE IKPSSP+ +HL+ FKLS LDQ+ P Y P++ FY N + + G ++
Sbjct: 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKG--LQIS 58
Query: 65 QCLKTSLSKILTLFYPFAGRFKDHASIECNDDGADFLEAQVICRLSDIPRQPNANNLRTF 124
LK SLS+ L+ FYPF+GR KD+ I+ ++G F E +V LSD + P L F
Sbjct: 59 IQLKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKF 118
Query: 125 LPIEIESMEA--VTNILLCVQASFFECGGMPIEV-------------------------- 156
LP + S E+ + +Q + F+CGG+ + +
Sbjct: 119 LPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRGH 178
Query: 157 ---QIIPHPEFLTASVFPPKDPPMLPLP-FPPGNCKTR----TRRFVFTASKIAALKAKA 208
I P F +S FPP + + N + T+RFVF A IA L+AKA
Sbjct: 179 YSEVINPDL-FEASSFFPPLNSFPVQFLLLMEENWFFKENYITKRFVFDAKAIATLRAKA 237
Query: 209 AGACVQQPSRVEAVTLLIWKCSMIAISKTTVRGCPRLSQATHAVNLRKWTRRPMAANCVG 268
V PSR+E ++ IWKC A ++ PR S + HAVN+R+ T+ PM+ +G
Sbjct: 238 KSKRVPNPSRIETLSCFIWKCCTAA--SRSISAAPRPSISVHAVNIRQRTKPPMSRYSIG 295
Query: 269 N 269
N
Sbjct: 296 N 296
|
Length = 444 |
| >gnl|CDD|217048 pfam02458, Transferase, Transferase family | Back alignment and domain information |
|---|
| >gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 269 | |||
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 100.0 | |
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 100.0 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 100.0 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 100.0 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 100.0 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 96.99 | |
| COG4908 | 439 | Uncharacterized protein containing a NRPS condensa | 90.57 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 89.65 |
| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-56 Score=416.52 Aligned_cols=259 Identities=39% Similarity=0.650 Sum_probs=212.1
Q ss_pred ceEEEEeeeeeeCCCCCCCCCccccCCccccCCCCccccEEEEecCCCCCCCCcchhHHHHHHHHHHHhhhhhccCCcce
Q 045542 5 LEIENISRETIKPSSPTPNHLRNFKLSFLDQIAPVMYTPIVLFYSQNGDSDHPGEAAKMCQCLKTSLSKILTLFYPFAGR 84 (269)
Q Consensus 5 ~~V~i~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~~y~~~i~~f~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~LaGr 84 (269)
|+|+++++++|+|+.|||.+.+.++||.|||++...|++.+|||+.+.+.+. +..+++++||+||+++|++|||||||
T Consensus 1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~~--~~~~~~~~Lk~sLs~~L~~fyplAGR 78 (444)
T PLN00140 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNF--KGLQISIQLKRSLSETLSTFYPFSGR 78 (444)
T ss_pred CeeEEeccceeccCCCCccccccCCCChHHhcccccccceEEEeeCCCcccc--cchhHHHHHHHHHHHHHhhhhccCcc
Confidence 6899999999999999998777899999999888999999999997643211 11467899999999999999999999
Q ss_pred ecCceeEEecCCCceEEEEEecccccccCCCCCcccccccccccccc--ccccccceEEEEEeeeecCceEEEEeecc--
Q 045542 85 FKDHASIECNDDGADFLEAQVICRLSDIPRQPNANNLRTFLPIEIES--MEAVTNILLCVQASFFECGGMPIEVQIIP-- 160 (269)
Q Consensus 85 l~~~~~i~c~~~gv~f~~a~~~~~l~dl~~~p~~~~~~~l~p~~~~~--~~~~~~Pll~vQvt~f~cGG~~lg~~~~h-- 160 (269)
|+.+++|+|||+||.|+||+++.+++|+...++...+++|+|..+.. .+..+.|++++|||+|.|||++||+++||
T Consensus 79 l~~~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~~H~v 158 (444)
T PLN00140 79 VKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKI 158 (444)
T ss_pred ccCCceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeeeceEc
Confidence 99889999999999999999999999987655544567888864321 12345799999999999999999999987
Q ss_pred -------------------------CCCCCCC-ccCCCCCCCC-CCC----CCCCCCCCeeEEEEEEcHHHHHHHHHHhh
Q 045542 161 -------------------------HPEFLTA-SVFPPKDPPM-LPL----PFPPGNCKTRTRRFVFTASKIAALKAKAA 209 (269)
Q Consensus 161 -------------------------~p~~dr~-~l~~~r~~P~-~p~----~~~~~~~~~~~~~f~~s~~~i~~Lk~~~~ 209 (269)
.|.|||. .++|+++.+. ... ..+....+++.++|+|++++|++||+.+.
T Consensus 159 ~Dg~s~~~Fl~~WA~~~rg~~~~~~~P~~dr~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~~f~fs~~~I~~LK~~~~ 238 (444)
T PLN00140 159 IDAATASAFLDSWAANTRGHYSEVINPDLFEASSFFPPLNSFPVQFLLLMEENWFFKENYITKRFVFDAKAIATLRAKAK 238 (444)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCCCCcccccccccCCCCCcccccccccccccccccCceEEEEEEECHHHHHHHHHhcc
Confidence 3677775 3444442211 110 12223457899999999999999999997
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhhcccccC--CCCcceEEEEEecCCCCCCCCCCCCCCCC
Q 045542 210 GACVQQPSRVEAVTLLIWKCSMIAISKTTVR--GCPRLSQATHAVNLRKWTRRPMAANCVGN 269 (269)
Q Consensus 210 ~~~~~~~St~dal~A~~W~~~~rA~~~~r~~--~~~~~~~l~~~vd~R~r~~pplp~~Y~GN 269 (269)
.....++|+||+++||+|+|++|| ++. +.++.+.+.++||+|+|++||||++||||
T Consensus 239 ~~~~~~~S~~e~vsA~iWr~~~rA----~~~~~~~~~~~~~~~~vn~R~Rl~PpLP~~y~GN 296 (444)
T PLN00140 239 SKRVPNPSRIETLSCFIWKCCTAA----SRSISAAPRPSISVHAVNIRQRTKPPMSRYSIGN 296 (444)
T ss_pred cccCCCCchhHHHHHHHHHHHHHH----hhhccCCCCceEEEEEEeccccCCCCCCcccccc
Confidence 654467999999999999999999 642 23578999999999999999999999999
|
|
| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 269 | ||||
| 2bgh_A | 421 | Crystal Structure Of Vinorine Synthase Length = 421 | 1e-24 | ||
| 4g2m_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 7e-15 | ||
| 4g0b_A | 436 | Structure Of Native Hct From Coffea Canephora Lengt | 8e-15 | ||
| 4g22_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 8e-14 |
| >pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 | Back alignment and structure |
|
| >pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 | Back alignment and structure |
| >pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 | Back alignment and structure |
| >pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 269 | |||
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 6e-64 | |
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 5e-56 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 1e-44 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 3e-43 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 4e-27 |
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 | Back alignment and structure |
|---|
Score = 205 bits (522), Expect = 6e-64
Identities = 102/301 (33%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 1 MAGELEIENISRETIKPSSPTPNHLRNFKLSFLDQIAPVMYTPIVLFYSQNGDSDHPGEA 60
MA ++E +S E I PSSPTP L+ +K+S LDQ+ + P +LFY DS+
Sbjct: 1 MAPQMEK--VSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLD--P 56
Query: 61 AKMCQCLKTSLSKILTLFYPFAGRFKDHASIECNDDGADFLEAQVICRLSDI----PRQP 116
A+ Q LK SLSK+LT FYP AGR ++S++CND G F+EA+V +LS
Sbjct: 57 AQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELE 116
Query: 117 NANNLRTFLPIEIESMEAVTNILLCVQASFFECGGMPIEVQI------------------ 158
+ +E ++ L V+ SFFECGG I V +
Sbjct: 117 KLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWT 176
Query: 159 --------IPHPEF-LTASVFPPKDPPMLPLPFPPGNCKTRTRRFVFTASKIAALKAKAA 209
I P F L A FPP D P P N +RFVF KI AL+A+A+
Sbjct: 177 ATCRGETEIVLPNFDLAARHFPPVDNTPSPELVPDENV--VMKRFVFDKEKIGALRAQAS 234
Query: 210 GACVQQ-PSRVEAVTLLIWKCSMIAISKTTVRGCPRLSQATHAVNLRKWTRRPMAANCVG 268
A ++ SRV+ V IWK + G AVNLR P+ +G
Sbjct: 235 SASEEKNFSRVQLVVAYIWKHVIDVTRAK--YGAKNKFVVVQAVNLRSRMNPPLPHYAMG 292
Query: 269 N 269
N
Sbjct: 293 N 293
|
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 269 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 100.0 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 100.0 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 100.0 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 100.0 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 100.0 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 95.67 | |
| 3fot_A | 519 | 15-O-acetyltransferase; fusarium head blight, tric | 90.69 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-56 Score=413.47 Aligned_cols=255 Identities=30% Similarity=0.456 Sum_probs=210.6
Q ss_pred ccceEEEEeeeeeeCCCCCCCCCccccCCccccCCCCccccEEEEecCCCCCCCCcchhHHHHHHHHHHHhhhhhccCCc
Q 045542 3 GELEIENISRETIKPSSPTPNHLRNFKLSFLDQIAPVMYTPIVLFYSQNGDSDHPGEAAKMCQCLKTSLSKILTLFYPFA 82 (269)
Q Consensus 3 ~~~~V~i~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~~y~~~i~~f~~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~La 82 (269)
+.|+|+|.++++|+|+.|||. +.++||+||+.+...|++.+|||+.++..+ ...++.||+||+++|++|||||
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~-----~~~~~~Lk~sLs~~L~~f~plA 76 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGSSN-----FFDAKVLKDALSRALVPFYPMA 76 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSCTT-----TTCHHHHHHHHHHHTTTTGGGG
T ss_pred CceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCCcc-----ccHHHHHHHHHHHHHhhccccc
Confidence 458999999999999999875 469999999998889999999999754322 3568999999999999999999
Q ss_pred ceec----CceeEEecCCCceEEEEEecccccccCCCCCccccccccccccccccccccceEEEEEeeeecCceEEEEee
Q 045542 83 GRFK----DHASIECNDDGADFLEAQVICRLSDIPRQPNANNLRTFLPIEIESMEAVTNILLCVQASFFECGGMPIEVQI 158 (269)
Q Consensus 83 Grl~----~~~~i~c~~~gv~f~~a~~~~~l~dl~~~p~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~cGG~~lg~~~ 158 (269)
|||+ ++++|+|||+||.|+||++|++++|+.+..+...+++|+|......+..+.|++.+|||+|+|||++||+++
T Consensus 77 GRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~ 156 (439)
T 4g22_A 77 GRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGM 156 (439)
T ss_dssp CEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEE
T ss_pred eeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEe
Confidence 9997 379999999999999999999999997632333567788854432234568999999999999999999999
Q ss_pred cc--------------------------CCCCCCCccCCCCCCCC--------CCCCC----C----CCC-CCeeEEEEE
Q 045542 159 IP--------------------------HPEFLTASVFPPKDPPM--------LPLPF----P----PGN-CKTRTRRFV 195 (269)
Q Consensus 159 ~h--------------------------~p~~dr~~l~~~r~~P~--------~p~~~----~----~~~-~~~~~~~f~ 195 (269)
|| .|.|||+.+. ++++|. .+... . ... .++++++|+
T Consensus 157 ~H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~-~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 235 (439)
T 4g22_A 157 RHHAADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLR-ARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFK 235 (439)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGC-CCSSCCCSSCCGGGSCCC---------------CEEEEEEE
T ss_pred eeccCcHHHHHHHHHHHHHHhCCCCCCCCCcccccccc-CCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEE
Confidence 87 3788987543 344443 01000 0 112 578999999
Q ss_pred EcHHHHHHHHHHhhcCC-CCCCChhhHHHHHHHHHHHhhhcccccCCCCcceEEEEEecCCCCCCCCCCCCCCCC
Q 045542 196 FTASKIAALKAKAAGAC-VQQPSRVEAVTLLIWKCSMIAISKTTVRGCPRLSQATHAVNLRKWTRRPMAANCVGN 269 (269)
Q Consensus 196 ~s~~~i~~Lk~~~~~~~-~~~~St~dal~A~~W~~~~rA~~~~r~~~~~~~~~l~~~vd~R~r~~pplp~~Y~GN 269 (269)
|++++|++||+.+.++. ..++||||+|+||+|+|++|| |++++++.+.+.++||+|+|++||+|++|+||
T Consensus 236 fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rA----r~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN 306 (439)
T 4g22_A 236 LTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKA----RGLEVDQGTKLYIATDGRARLRPSLPPGYFGN 306 (439)
T ss_dssp ECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHH----TTCCTTCEEEEEEEEECTTTSSSCCCTTBCSC
T ss_pred ECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHh----cCCCCCCcEEEEEEEcccCCCCCCCCCCcccc
Confidence 99999999999998653 468999999999999999999 98888899999999999999999999999999
|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
|---|
| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 269 | |||
| d1q9ja2 | 238 | Polyketide synthase associated protein 5, PapA5 {M | 94.25 |
| >d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: Polyketide synthase associated protein 5, PapA5 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.25 E-value=0.12 Score=40.59 Aligned_cols=73 Identities=16% Similarity=0.017 Sum_probs=56.1
Q ss_pred eeEEEEEEcHHHHHHHHHHhhcCCCCCCChhhHHHHHHHHHHHhhhcccccCCCCcceEEEEEecCCCCCCCCCCCCCCC
Q 045542 189 TRTRRFVFTASKIAALKAKAAGACVQQPSRVEAVTLLIWKCSMIAISKTTVRGCPRLSQATHAVNLRKWTRRPMAANCVG 268 (269)
Q Consensus 189 ~~~~~f~~s~~~i~~Lk~~~~~~~~~~~St~dal~A~~W~~~~rA~~~~r~~~~~~~~~l~~~vd~R~r~~pplp~~Y~G 268 (269)
.....+.++++.-++|++.|.+. .+|.+.++.|-+=..+.+- .+ ..+....+..+++.|+++.|+...+.+|
T Consensus 31 ~~~~~~~ls~~~t~~l~~~~~~~---~~T~~~~l~aa~~~~l~~~----~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~G 102 (238)
T d1q9ja2 31 VPVTRLWLSKQQTSDLMAFGREH---RLSLNAVVAAAILLTEWQL----RN-TPHVPIPYVYPVDLRFVLAPPVAPTEAT 102 (238)
T ss_dssp CCEEEECCCHHHHHHHHHHHTTT---TCCHHHHHHHHHHHHHHHH----HT-CSSCCEEEEEEEETTTTSSSCCCTTTBS
T ss_pred CceEEEEeCHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHH----hC-CCCccccccccccccccccCccccceeE
Confidence 34556799999999999999754 5889998888655555444 23 2345678899999999999888888888
Q ss_pred C
Q 045542 269 N 269 (269)
Q Consensus 269 N 269 (269)
|
T Consensus 103 ~ 103 (238)
T d1q9ja2 103 N 103 (238)
T ss_dssp C
T ss_pred e
Confidence 6
|