Citrus Sinensis ID: 045558

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------
MATDQEKKNNLPNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWMDEIDNFPVHVPKVMPIDF
cccHHHHHccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEcccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHcccccccccEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEEEccccccccccccHHHHHHHcccccEEEEEEcccccccccccEEEEEEEccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccHHHHHHHHHHccccccccHHHHHHHHHccccccccHHHHHHHHHHccccccccEEEEEEEcccHHHHHHHHHHcccccccccccccccccccccccccccccccc
ccccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEcEccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEHHHHHHccccccccccEEEEEEcccccEEEEccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHccccHHcccHcHHEHHHcccccccHHHHHHHHHHHccccccccEEEEEEEcccccccHHHHHHHccccccccccccHHHHcccccccccEEEccc
matdqekknnlpnffLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNfacykpgnpsqmcsRKLFMQIASKIGIFSEETLSFHKKILErsgmgnmsyvpkamldnpagekNMAEARKETEGVIIGAIDELldktgvkprdiGILVVnsslfnptpslsAMVVNHYKLRGNilsynlggmgcsagLISIDLAKQLLQLQPNSYALVVSTenltmnwyagndrsMLLTNCLFRLGGAAILLsnrssdrrrsKYELVHTLRthkggddrsyncvsqqedeskrIGVKISKDLMAVAGEALKTnittlgplvlpmseQLLFTATLVARKIFKMkikpyipdfKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKgrirkgdktwQIAFGSGFKCNSAVWRALKTinpaheknpwmdeidnfpvhvpkvmpidf
matdqekknnlpnfFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAIllsnrssdrrrskYELVHTlrthkggddrsyncvsqqedeskrigvKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWMDEIDNFPVHVPKVMPIDF
MATDQEKKNNLPNFFLSIKLKYVKLGYHYlisnalyllllpllfivlthlSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLsnrssdrrrsKYELVHTLRTHKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWMDEIDNFPVHVPKVMPIDF
***********PNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILE********************************GVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLS****************************************IGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWMDEIDNFPVHV********
************NFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFE*****RKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWMDEIDNFPVHVPKVMPI**
********NNLPNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHK*****************KRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWMDEIDNFPVHVPKVMPIDF
*********NLPNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWMDEIDNFPVHVPKVMPIDF
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MATDQEKKNNLPNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWMDEIDNFPVHVPKVMPIDF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query507 2.2.26 [Sep-21-2011]
O48780509 3-ketoacyl-CoA synthase 1 yes no 0.984 0.980 0.686 0.0
Q5XEP9528 3-ketoacyl-CoA synthase 1 no no 0.970 0.931 0.693 0.0
Q9FG87529 3-ketoacyl-CoA synthase 1 no no 0.960 0.920 0.715 0.0
Q9MAM3528 3-ketoacyl-CoA synthase 1 no no 0.966 0.928 0.598 0.0
Q9LN49516 3-ketoacyl-CoA synthase 4 no no 0.952 0.936 0.614 0.0
Q9SIX1512 3-ketoacyl-CoA synthase 9 no no 0.970 0.960 0.597 1e-180
O65677487 Probable 3-ketoacyl-CoA s no no 0.927 0.965 0.588 1e-165
Q9XF43497 3-ketoacyl-CoA synthase 6 no no 0.966 0.985 0.565 1e-164
Q570B4550 3-ketoacyl-CoA synthase 1 no no 0.956 0.881 0.542 1e-163
Q9C6L5492 3-ketoacyl-CoA synthase 5 no no 0.966 0.995 0.557 1e-160
>sp|O48780|KCS11_ARATH 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1 Back     alignment and function desciption
 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/501 (68%), Positives = 414/501 (82%), Gaps = 2/501 (0%)

Query: 5   QEKKNNLPNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNE 64
           +    NLP+F  S+KLKYVKLGYHYLI++ +YL L PL+ ++   +ST +V D   LW  
Sbjct: 11  ESSDRNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVLVIAAQISTFSVTDLRSLWEH 70

Query: 65  LRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIG 124
           L++N  ++++C + LVF  T+Y M+RPR VYLVNF+C+KP + S+ C++K+FM  +   G
Sbjct: 71  LQYNLISVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKP-DESRKCTKKIFMDRSKLTG 129

Query: 125 IFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDK 184
            F+EE L F +KIL+RSG+G  +Y+P+A+L+ P     M EARKE E V+ GAIDELL K
Sbjct: 130 SFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNP-CMKEARKEAETVMFGAIDELLAK 188

Query: 185 TGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQ 244
           T V P+DIGIL+VN SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAK 
Sbjct: 189 TNVNPKDIGILIVNCSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKH 248

Query: 245 LLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYEL 304
           LL   PN+YA+V+S EN+T+NWY GNDRS L++NCLFR+GGAAILLSN+  DRRRSKYEL
Sbjct: 249 LLHSIPNTYAMVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNKRWDRRRSKYEL 308

Query: 305 VHTLRTHKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSE 364
           V T+RTHKG DD+ + C++Q+ED + +IGV +SK+LMAVAG+ALKTNITTLGPLVLP SE
Sbjct: 309 VDTVRTHKGADDKCFGCITQEEDSASKIGVTLSKELMAVAGDALKTNITTLGPLVLPTSE 368

Query: 365 QLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSR 424
           QLLF ATLV RK+FKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE+EK+LKL EW MEPSR
Sbjct: 369 QLLFFATLVGRKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLKLTEWHMEPSR 428

Query: 425 MTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHE 484
           MTLYRFGNTSSS LWYELAY EAKGRI+KGD+ WQIAFGSGFKCNS+VWRA++++NP  E
Sbjct: 429 MTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRIWQIAFGSGFKCNSSVWRAVRSVNPKKE 488

Query: 485 KNPWMDEIDNFPVHVPKVMPI 505
           KNPWMDEI  FPV VPKV  I
Sbjct: 489 KNPWMDEIHEFPVEVPKVSTI 509
Active on both saturated and mono-unsaturated acyl chains C16 to C20.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 1EC: 9
>sp|Q5XEP9|KCS17_ARATH 3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2 Back     alignment and function description
>sp|Q9FG87|KCS19_ARATH 3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAM3|KCS1_ARATH 3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIX1|KCS9_ARATH 3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1 Back     alignment and function description
>sp|O65677|KCS2_ARATH Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1 Back     alignment and function description
>sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1 Back     alignment and function description
>sp|Q570B4|KCS10_ARATH 3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2 Back     alignment and function description
>sp|Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query507
224102139520 beta-ketoacyl-coa synthase family protei 0.984 0.959 0.752 0.0
255551981526 acyltransferase, putative [Ricinus commu 0.980 0.944 0.774 0.0
356535335517 PREDICTED: 3-ketoacyl-CoA synthase 11-li 0.990 0.970 0.748 0.0
157673576529 beta-ketoacyl-CoA synthase [Gossypium hi 0.990 0.948 0.742 0.0
356574783517 PREDICTED: 3-ketoacyl-CoA synthase 11-li 0.988 0.969 0.746 0.0
356500378521 PREDICTED: 3-ketoacyl-CoA synthase 11-li 0.990 0.963 0.740 0.0
118486225519 unknown [Populus trichocarpa] 0.978 0.955 0.725 0.0
225432862521 PREDICTED: 3-ketoacyl-CoA synthase 11 [V 0.984 0.957 0.762 0.0
224113235527 beta-ketoacyl-coa synthase family protei 0.978 0.941 0.719 0.0
356535919517 PREDICTED: 3-ketoacyl-CoA synthase 11-li 0.990 0.970 0.720 0.0
>gi|224102139|ref|XP_002312562.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222852382|gb|EEE89929.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/501 (75%), Positives = 439/501 (87%), Gaps = 2/501 (0%)

Query: 5   QEKKNNLPNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNE 64
           + K+N LP F LS++LKYVKLGYHYLIS+A+YLLL+PLLFI   HLSTLT+ DF +LWN 
Sbjct: 20  ETKRNRLPYFLLSVRLKYVKLGYHYLISSAMYLLLVPLLFIASAHLSTLTIRDFVQLWNH 79

Query: 65  LRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIG 124
           L+FNF ++ LC   +VF +T+Y MSRPRK++LV+FACYKP  P++MC+R+ FM+ ++  G
Sbjct: 80  LKFNFVSVTLCSGLVVFLATLYFMSRPRKIFLVDFACYKP-EPARMCTRETFMEKSAVAG 138

Query: 125 IFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDK 184
            FSEE L+F KKILERSG+G  +Y P+A++        M +ARKE E V+ GAIDELL K
Sbjct: 139 CFSEENLAFQKKILERSGLGQNTYFPEAVM-RVTPRPCMEDARKEAEMVMFGAIDELLAK 197

Query: 185 TGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQ 244
           TGVK +DIG+L+VN SLFNPTPSLSAMV+NHYKLRGNILSYNLGGMGCSAGLISIDLAKQ
Sbjct: 198 TGVKAKDIGVLIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKQ 257

Query: 245 LLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYEL 304
           LLQ+ PNSYALV+S EN+T+NWY GNDRSML++NCLFR+GGAAILLSNR SDRRRSKY+L
Sbjct: 258 LLQVLPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRPSDRRRSKYQL 317

Query: 305 VHTLRTHKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSE 364
           +HT+RTHKG DD+ YNCV Q+ED++KRIGV +SKDLMAVAGEALKTNITTLGPLVLPMSE
Sbjct: 318 IHTVRTHKGADDKCYNCVFQKEDDTKRIGVSLSKDLMAVAGEALKTNITTLGPLVLPMSE 377

Query: 365 QLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSR 424
           QLLF ATLV RKIFK+ IKPYIPDFKLAFEHFCIHAGGRAVLDE+EK+L+L++W MEPSR
Sbjct: 378 QLLFFATLVGRKIFKLNIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSDWHMEPSR 437

Query: 425 MTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHE 484
           MTLYRFGNTSSS LWYELAY EAKGRIRKGD+TWQIAFGSGFKCNSAVW AL+TINPA E
Sbjct: 438 MTLYRFGNTSSSSLWYELAYSEAKGRIRKGDRTWQIAFGSGFKCNSAVWYALRTINPAKE 497

Query: 485 KNPWMDEIDNFPVHVPKVMPI 505
           KNPW+DEID FPVHVPKV+ I
Sbjct: 498 KNPWIDEIDEFPVHVPKVVSI 518

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255551981|ref|XP_002517035.1| acyltransferase, putative [Ricinus communis] gi|223543670|gb|EEF45198.1| acyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356535335|ref|XP_003536202.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|157673576|gb|ABV60087.1| beta-ketoacyl-CoA synthase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|356574783|ref|XP_003555524.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356500378|ref|XP_003519009.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|118486225|gb|ABK94954.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432862|ref|XP_002283935.1| PREDICTED: 3-ketoacyl-CoA synthase 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224113235|ref|XP_002332624.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222832843|gb|EEE71320.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356535919|ref|XP_003536489.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query507
TAIR|locus:2170837529 KCS20 "3-ketoacyl-CoA synthase 0.976 0.935 0.671 6e-183
TAIR|locus:2043849509 KCS11 "3-ketoacyl-CoA synthase 0.984 0.980 0.658 1.9e-179
TAIR|locus:2020215528 KCS2 "3-ketoacyl-CoA synthase 0.970 0.931 0.656 5.1e-177
TAIR|locus:2200955528 KCS1 "3-ketoacyl-CoA synthase 0.966 0.928 0.572 6.5e-154
TAIR|locus:2016397516 KCS4 "3-ketoacyl-CoA synthase 0.952 0.936 0.581 4.5e-153
TAIR|locus:2042684512 KCS9 "3-ketoacyl-CoA synthase 0.970 0.960 0.569 9.5e-153
TAIR|locus:2057706550 KCS10 "3-ketoacyl-CoA synthase 0.715 0.66 0.521 2.4e-140
TAIR|locus:2139579487 KCS17 "3-ketoacyl-CoA synthase 0.927 0.965 0.563 3e-140
TAIR|locus:2201262497 KCS6 "3-ketoacyl-CoA synthase 0.970 0.989 0.533 5.6e-139
TAIR|locus:2031260492 KCS5 "3-ketoacyl-CoA synthase 0.970 1.0 0.521 1.8e-135
TAIR|locus:2170837 KCS20 "3-ketoacyl-CoA synthase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1775 (629.9 bits), Expect = 6.0e-183, P = 6.0e-183
 Identities = 338/503 (67%), Positives = 407/503 (80%)

Query:     9 NNLPNFFLSIKLKYVKLGYHYXXXXXXXXXXXXXXXXXXXXXSTLTVDDFSKLWNELRFN 68
             NNLPNF LS++LKYVKLGYHY                     S+ T++D S L+N LRF+
Sbjct:    26 NNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAATIANLSSFTINDLSLLYNTLRFH 85

Query:    69 FGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSE 128
             F +  L    L+  ST Y  +RPR+V+L++F+CYKP +PS +C+R+ FM  + ++GIF+E
Sbjct:    86 FLSATLATALLISLSTAYFTTRPRRVFLLDFSCYKP-DPSLICTRETFMDRSQRVGIFTE 144

Query:   129 ETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVK 188
             + L+F +KILERSG+G  +Y P+A+L  P     M EARKE E V+ GAID +L+KTGVK
Sbjct:   145 DNLAFQQKILERSGLGQKTYFPEALLRVPPNPC-MEEARKEAETVMFGAIDAVLEKTGVK 203

Query:   189 PRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQL 248
             P+DIGILVVN SLFNPTPSLSAM+VN YKLRGNILSYNLGGMGCSAGLISIDLAKQ+LQ+
Sbjct:   204 PKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNLGGMGCSAGLISIDLAKQMLQV 263

Query:   249 QPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLXXXXXXXXXXKYELVHTL 308
             QPNSYALVVSTEN+T+NWY GNDRSMLL+NC+FR+GGAA+LL          KY+L+HT+
Sbjct:   264 QPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRSRSKYQLIHTV 323

Query:   309 RTHKGGDDRSYNCVSQQED----ESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSE 364
             RTHKG DD ++ CV Q+ED    E+ +IGV +SK+LMA+AGEALKTNITTLGPLVLPMSE
Sbjct:   324 RTHKGADDNAFGCVYQREDNNAEETGKIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSE 383

Query:   365 QLLFTATLVARKIFKMK-IKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPS 423
             QLLF ATLVARK+FK+K IKPYIPDFKLAFEHFCIHAGGRAVLDE+EK+L L+EW MEPS
Sbjct:   384 QLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPS 443

Query:   424 RMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAH 483
             RMTL RFGNTSSS LWYELAY EAKGRI++GD+TWQIAFGSGFKCNSAVW+AL+TI+P  
Sbjct:   444 RMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTIDPMD 503

Query:   484 EK-NPWMDEIDNFPVHVPKVMPI 505
             EK NPW+DEID+FPV VP++ PI
Sbjct:   504 EKTNPWIDEIDDFPVQVPRITPI 526
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0009922 "fatty acid elongase activity" evidence=IDA
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0009416 "response to light stimulus" evidence=IEP
GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA
GO:0042335 "cuticle development" evidence=RCA
TAIR|locus:2043849 KCS11 "3-ketoacyl-CoA synthase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020215 KCS2 "3-ketoacyl-CoA synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200955 KCS1 "3-ketoacyl-CoA synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016397 KCS4 "3-ketoacyl-CoA synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042684 KCS9 "3-ketoacyl-CoA synthase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057706 KCS10 "3-ketoacyl-CoA synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139579 KCS17 "3-ketoacyl-CoA synthase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201262 KCS6 "3-ketoacyl-CoA synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031260 KCS5 "3-ketoacyl-CoA synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FG87KCS19_ARATH2, ., 3, ., 1, ., -0.71510.96050.9206nono
O48780KCS11_ARATH2, ., 3, ., 1, ., 1, 1, 90.68660.98420.9803yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.976
3rd Layer2.3.1.1190.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00081500
beta-ketoacyl-coa synthase family protein (520 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
PLN02192511 PLN02192, PLN02192, 3-ketoacyl-CoA synthase 0.0
PLN02854521 PLN02854, PLN02854, 3-ketoacyl-CoA synthase 0.0
PLN02377502 PLN02377, PLN02377, 3-ketoacyl-CoA synthase 0.0
PLN02932478 PLN02932, PLN02932, 3-ketoacyl-CoA synthase 0.0
pfam08392290 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketid 0.0
PLN00415466 PLN00415, PLN00415, 3-ketoacyl-CoA synthase 0.0
cd00831361 cd00831, CHS_like, Chalcone and stilbene synthases 1e-137
COG3424356 COG3424, BcsA, Predicted naringenin-chalcone synth 7e-22
COG0332323 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] 3e-18
cd00830320 cd00830, KAS_III, Ketoacyl-acyl carrier protein sy 3e-15
cd00827324 cd00827, init_cond_enzymes, "initiating" condensin 2e-13
TIGR00747318 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) 3e-11
pfam02797151 pfam02797, Chal_sti_synt_C, Chalcone and stilbene 3e-08
PLN03169391 PLN03169, PLN03169, chalcone synthase family prote 5e-08
pfam0854190 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- 7e-08
PLN03171399 PLN03171, PLN03171, chalcone synthase-like protein 3e-07
PLN03172393 PLN03172, PLN03172, chalcone synthase family prote 8e-07
PLN03170401 PLN03170, PLN03170, chalcone synthase; Provisional 4e-06
PLN03173391 PLN03173, PLN03173, chalcone synthase; Provisional 8e-06
PLN03168389 PLN03168, PLN03168, chalcone synthase; Provisional 5e-05
pfam0854580 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-pr 3e-04
PRK12879325 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei 3e-04
cd00825332 cd00825, decarbox_cond_enzymes, decarboxylating co 5e-04
PLN02326379 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protei 0.003
>gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase Back     alignment and domain information 
 Score =  808 bits (2089), Expect = 0.0
 Identities = 355/496 (71%), Positives = 423/496 (85%), Gaps = 2/496 (0%)

Query: 10  NLPNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNF 69
            LP+F  S+KLKYVKLGYHYLI++ +YL L PL+ ++   LST ++ D   LW  L+FN 
Sbjct: 18  KLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNL 77

Query: 70  GTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEE 129
            +++LC   LVF ST+Y ++RPR VYLV+F+CYKP + S+ C+RK+FM  +   G F+EE
Sbjct: 78  ISVILCSTLLVFLSTLYFLTRPRPVYLVDFSCYKP-DDSRKCTRKIFMDRSKLTGSFTEE 136

Query: 130 TLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKP 189
            L F +KILERSG+G  +Y+P+A+L+ P     MAEARKE E V+ GAID+LL KT VKP
Sbjct: 137 NLEFQRKILERSGLGESTYLPEAVLNVPP-NPCMAEARKEAETVMFGAIDQLLAKTSVKP 195

Query: 190 RDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQ 249
           +DIGIL+VN SLFNPTPSLSAMV+NHYKLRGNILSYNLGGMGCSAGLISIDLAK LLQ+ 
Sbjct: 196 KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVH 255

Query: 250 PNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLR 309
           PNSYALV+S EN+T+NWY GNDRSML++NCLFR+GGAAILLSN+ SDRRRSKY+LVHT+R
Sbjct: 256 PNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVR 315

Query: 310 THKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFT 369
           THKG DD+ + CV+Q+ED + +IGV +SKDLMAVAG+ALKTNITTLGPLVLPMSEQLLF 
Sbjct: 316 THKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFF 375

Query: 370 ATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYR 429
           ATLV +K+FKMK+KPYIPDFKLAFEHFCIHAGGRAVLDE+EK+L+L++W MEPSRMTLYR
Sbjct: 376 ATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYR 435

Query: 430 FGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEKNPWM 489
           FGNTSSS LWYELAY EAKGRI+KGD+TWQIAFGSGFKCNSAVW+AL+T+NPA EKNPWM
Sbjct: 436 FGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKNPWM 495

Query: 490 DEIDNFPVHVPKVMPI 505
           DEI  FPV VPKV  I
Sbjct: 496 DEIHEFPVDVPKVSTI 511

Length = 511
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like protein Back     alignment and domain information
>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain Back     alignment and domain information
>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Back     alignment and domain information
>gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|203976 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Back     alignment and domain information
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 507
PLN02192511 3-ketoacyl-CoA synthase 100.0
PLN02854521 3-ketoacyl-CoA synthase 100.0
PLN02377502 3-ketoacyl-CoA synthase 100.0
PLN02932478 3-ketoacyl-CoA synthase 100.0
PLN00415466 3-ketoacyl-CoA synthase 100.0
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 100.0
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 100.0
PLN03172393 chalcone synthase family protein; Provisional 100.0
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 100.0
PLN03168389 chalcone synthase; Provisional 100.0
PLN03173391 chalcone synthase; Provisional 100.0
PLN03169391 chalcone synthase family protein; Provisional 100.0
PLN03171399 chalcone synthase-like protein; Provisional 100.0
PLN03170401 chalcone synthase; Provisional 100.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 100.0
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 100.0
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 100.0
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06840339 hypothetical protein; Validated 100.0
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 100.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 100.0
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK04262347 hypothetical protein; Provisional 100.0
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 100.0
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
cd00827324 init_cond_enzymes "initiating" condensing enzymes 100.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 100.0
PLN02577459 hydroxymethylglutaryl-CoA synthase 100.0
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 100.0
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 99.97
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 99.97
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.95
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.92
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 99.79
PF02797151 Chal_sti_synt_C: Chalcone and stilbene synthases, 99.78
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 99.77
KOG1393462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 99.68
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 99.65
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.62
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.5
PRK08304337 stage V sporulation protein AD; Validated 99.48
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.47
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.42
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 99.4
PRK09051394 beta-ketothiolase; Provisional 99.4
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.38
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.35
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.33
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.31
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.28
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.28
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.25
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.23
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.23
PRK05790393 putative acyltransferase; Provisional 99.22
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.19
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.18
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.17
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.15
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.15
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.12
PRK12404334 stage V sporulation protein AD; Provisional 99.12
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.09
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.06
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.02
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.02
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.0
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.0
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.99
PRK12578385 acetyl-CoA acetyltransferase; Provisional 98.96
PRK06059399 lipid-transfer protein; Provisional 98.94
PRK08170426 acetyl-CoA acetyltransferase; Provisional 98.94
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 98.89
PRK06954397 acetyl-CoA acetyltransferase; Provisional 98.88
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 98.87
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 98.87
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.85
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 98.85
PRK06065392 acetyl-CoA acetyltransferase; Provisional 98.85
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.83
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.83
cd00832399 CLF Chain-length factor (CLF) is a factor required 98.81
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 98.76
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 98.73
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 98.72
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 98.72
PLN02287452 3-ketoacyl-CoA thiolase 98.71
PRK06158384 thiolase; Provisional 98.7
PRK07516389 acetyl-CoA acetyltransferase; Provisional 98.7
PRK07851406 acetyl-CoA acetyltransferase; Provisional 98.7
PRK07850387 acetyl-CoA acetyltransferase; Provisional 98.67
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.67
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.66
PRK06633392 acetyl-CoA acetyltransferase; Provisional 98.66
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 98.66
PRK06289403 acetyl-CoA acetyltransferase; Provisional 98.65
PRK08131401 acetyl-CoA acetyltransferase; Provisional 98.65
PRK06366388 acetyl-CoA acetyltransferase; Provisional 98.62
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 98.62
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 98.61
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 98.59
PLN02644394 acetyl-CoA C-acetyltransferase 98.58
PRK06504390 acetyl-CoA acetyltransferase; Provisional 98.56
PRK06157398 acetyl-CoA acetyltransferase; Validated 98.53
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 98.53
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 98.53
PRK08256391 lipid-transfer protein; Provisional 98.52
PRK06365430 acetyl-CoA acetyltransferase; Provisional 98.48
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 98.47
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 98.46
PRK09268427 acetyl-CoA acetyltransferase; Provisional 98.42
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.41
PRK07801382 acetyl-CoA acetyltransferase; Provisional 98.41
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.39
PRK08142388 acetyl-CoA acetyltransferase; Provisional 98.19
PRK08257 498 acetyl-CoA acetyltransferase; Validated 98.09
PRK07855386 lipid-transfer protein; Provisional 98.02
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 98.0
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 97.97
COG3321 1061 Polyketide synthase modules and related proteins [ 97.88
PRK06066385 acetyl-CoA acetyltransferase; Provisional 97.78
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 97.6
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 97.49
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 97.4
PRK07937352 lipid-transfer protein; Provisional 97.38
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 96.92
PF08540282 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s 96.76
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 95.16
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 95.02
PRK06025417 acetyl-CoA acetyltransferase; Provisional 94.17
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 94.04
KOG1392465 consensus Acetyl-CoA acetyltransferase [Lipid tran 93.42
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 92.37
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.18
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.05
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 91.76
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 91.63
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 91.44
PLN02644394 acetyl-CoA C-acetyltransferase 91.22
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 90.54
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 90.34
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 90.24
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 89.99
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.95
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.63
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 89.47
PRK06366388 acetyl-CoA acetyltransferase; Provisional 89.27
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 89.1
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 88.86
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 88.79
PRK04262347 hypothetical protein; Provisional 88.75
PRK06840339 hypothetical protein; Validated 88.55
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 88.26
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 88.15
PRK07850387 acetyl-CoA acetyltransferase; Provisional 87.7
PRK06954397 acetyl-CoA acetyltransferase; Provisional 87.65
PRK06445394 acetyl-CoA acetyltransferase; Provisional 87.42
PRK09051394 beta-ketothiolase; Provisional 86.17
PRK09052399 acetyl-CoA acetyltransferase; Provisional 86.04
PRK07801382 acetyl-CoA acetyltransferase; Provisional 85.77
PRK06504390 acetyl-CoA acetyltransferase; Provisional 85.66
PRK05656393 acetyl-CoA acetyltransferase; Provisional 85.66
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 85.56
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 85.3
PRK07661391 acetyl-CoA acetyltransferase; Provisional 85.14
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 84.94
PRK07851406 acetyl-CoA acetyltransferase; Provisional 84.86
PRK06690361 acetyl-CoA acetyltransferase; Provisional 84.64
PRK08242402 acetyl-CoA acetyltransferase; Validated 84.28
PRK08256391 lipid-transfer protein; Provisional 84.02
PRK07108392 acetyl-CoA acetyltransferase; Provisional 83.5
PLN02287452 3-ketoacyl-CoA thiolase 83.03
PRK06205404 acetyl-CoA acetyltransferase; Provisional 81.93
PRK08235393 acetyl-CoA acetyltransferase; Provisional 81.7
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 81.24
PRK08257498 acetyl-CoA acetyltransferase; Validated 81.19
COG1214220 Inactive homolog of metal-dependent proteases, put 80.92
PRK06633392 acetyl-CoA acetyltransferase; Provisional 80.32
>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information 
Probab=100.00  E-value=3.3e-119  Score=957.16  Aligned_cols=498  Identities=71%  Similarity=1.216  Sum_probs=477.2

Q ss_pred             hhhcCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccChhhHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 045558            6 EKKNNLPNFFLSIKLKYVKLGYHYLISNALYLLLLPLLFIVLTHLSTLTVDDFSKLWNELRFNFGTLLLCLVSLVFTSTV   85 (507)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (507)
                      ++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++.+|+..+|..+++++++++.+++++++++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (511)
T PLN02192         14 SSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVFLSTL   93 (511)
T ss_pred             chhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999998888999999999999889988888888888888888888899


Q ss_pred             HHhcCCCceEEEEeeEEeCCCCCccccHHHHHHHHHhccCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCccccHHH
Q 045558           86 YLMSRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAE  165 (507)
Q Consensus        86 ~~~~~~~~V~Iv~~~~y~P~~~~~~v~~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~p~~~~~ma~  165 (507)
                      |+++||++|||+||+||+|+ +++++|.+.|+|++...+.|++++++|++||++|||+|++||+|+..+++|| ..+|++
T Consensus        94 ~~~~~~~~vylvd~~c~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~-~~~~~~  171 (511)
T PLN02192         94 YFLTRPRPVYLVDFSCYKPD-DSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPP-NPCMAE  171 (511)
T ss_pred             HHHcCCCcEEEEeeeeecCC-ccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCC-CccHHH
Confidence            99999999999999999999 9999999999999999999999999999999999999999999999999999 889999


Q ss_pred             HHhhhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHhcCCCCeEEEeecCCcchHHHHHHHHHHHH
Q 045558          166 ARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQL  245 (507)
Q Consensus       166 ~~~ea~~l~~~Aa~~aL~~agi~~~dId~lI~~~s~~~~~Psla~~v~~~lgl~~~~~~~dl~g~gCs~~l~AL~lA~~l  245 (507)
                      +|+|+++++++|+++||+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+|||||||++||++|+++
T Consensus       172 ~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~l  251 (511)
T PLN02192        172 ARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHL  251 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCCCCCcCCCCchhhcccccccccceeEEEeccCCCcccccceeeeEEeeeecCCCCcccccccc
Q 045558          246 LQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHKGGDDRSYNCVSQQ  325 (507)
Q Consensus       246 L~~g~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lFgDGAaAvlLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~v~~~  325 (507)
                      |+++++++||||++|++|.+||.++||+++++|++|||||||+||++++.++++++|++.+.++++.++|++.|+|++++
T Consensus       252 L~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~  331 (511)
T PLN02192        252 LQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQE  331 (511)
T ss_pred             HHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecc
Confidence            99999999999999999999999999999999999999999999999765555678999999999999999999999999


Q ss_pred             cccccccceeechhhHHHHHHhhhhhhhccCCCcccchhhHHHHHHHHHHHHHHhhcccCccchhhhccEEEecCCCHHH
Q 045558          326 EDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAV  405 (507)
Q Consensus       326 ~d~~g~~g~~ls~d~~~~~g~~~k~ni~~lgp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~v  405 (507)
                      +|++|+.|+.|+||+|.++|++++.|+++++|.++|.+|+.++++.|.++++++.+++.|+|+++.+|||||+||+|+++
T Consensus       332 ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~I  411 (511)
T PLN02192        332 EDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAV  411 (511)
T ss_pred             cccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHHH
Confidence            99999999999999999999999999999999999999999888889999999988998999999999999999999999


Q ss_pred             HHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEecccCCCCCC
Q 045558          406 LDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRALKTINPAHEK  485 (507)
Q Consensus       406 i~~v~~~Lgl~~e~~~~S~~~l~~~GNtsSaSi~~~L~~~~~~g~l~~GD~VlliafGsG~~~~s~v~r~~~~~~~~~~~  485 (507)
                      ++.++++||++++++++|++++++||||||||+||+|++++++|++++||+|||+|||+||+|++++|||+|++++..+.
T Consensus       412 Id~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~  491 (511)
T PLN02192        412 LDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEK  491 (511)
T ss_pred             HHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999876424


Q ss_pred             CCcccccccCCCCCCCCCCC
Q 045558          486 NPWMDEIDNFPVHVPKVMPI  505 (507)
Q Consensus       486 ~~w~~~~~~~p~~~~~~~~~  505 (507)
                      |||+||||+|||++|.++.|
T Consensus       492 ~~w~~~i~~yp~~~~~~~~~  511 (511)
T PLN02192        492 NPWMDEIHEFPVDVPKVSTI  511 (511)
T ss_pred             CCchhhHHhCCCCCCCCCCC
Confidence            99999999999999987654

>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 3e-09
1qlv_A402 Pyrone Synthase (Pys) From Gerbera Hybrida Length = 4e-07
3ale_A416 A Type Iii Polyketide Synthase That Produces Diaryl 8e-07
1cgz_A389 Chalcone Synthase From Alfalfa Complexed With Resve 1e-06
1u0v_A393 An Aldol Switch Discovered In Stilbene Synthases Me 1e-06
2h84_A374 Crystal Structure Of The C-terminal Type Iii Polyke 4e-06
1z1e_A390 Crystal Structure Of Stilbene Synthase From Arachis 4e-06
3oit_A387 Crystal Structure Of Curcuminoid Synthase Cus From 7e-06
3tsy_A979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 7e-06
1i89_A389 Chalcone Synthase (G256l) Length = 389 1e-05
1i88_A389 Chalcone Synthase (G256v) Length = 389 1e-05
1jwx_A389 Chalcone Synthase--F215s Mutant Length = 389 1e-05
1bi5_A389 Chalcone Synthase From Alfalfa Length = 389 1e-05
1i86_A389 Chalcone Synthase, G256a Mutant Length = 389 1e-05
1chw_A389 Chalcone Synthase From Alfalfa Complexed With Hexan 1e-05
1cml_A389 Chalcone Synthase From Alfalfa Complexed With Malon 1e-05
1bq6_A388 Chalcone Synthase From Alfalfa With Coenzyme A Leng 1e-05
1i8b_A389 Chalcone Synthase (g256f) Length = 389 1e-05
1xes_A413 Crystal Structure Of Stilbene Synthase From Pinus S 7e-05
1u0u_A397 An Aldol Switch Discovered In Stilbene Synthases Me 8e-05
1d6i_A388 Chalcone Synthase (H303q Mutant) Length = 388 9e-05
1d6h_A387 Chalone Synthase (N336a Mutant Complexed With Coa) 1e-04
1ub7_A322 The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier 3e-04
1tee_A393 Crystal Structure Of C205f Mutant Of Pks18 From Myc 3e-04
1ted_A393 Crystal Structure Of A Type Iii Polyketide Synthase 4e-04
3awj_A402 Crystal Structure Of The Huperzia Serrata Polyketid 4e-04
3fk5_A338 Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei 6e-04
1hn9_A317 Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii 9e-04
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure 
Iteration: 1

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/351 (21%), Positives = 135/351 (38%), Gaps = 73/351 (20%)
Query: 136 KILERSGMGNMSYVP--KAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIG 193
           +++E +G+     V   +  L++P  E       +E +  +   I   LD   +   DI 
Sbjct: 48  RLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRVPAVIQRALDDAELLATDID 107
Query: 194 ILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSY 253
           +++  S      PSL+A ++N            +  +GC+AG  +I+ A       P + 
Sbjct: 108 VIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEAN 167
Query: 254 ALVVSTENLTMNWYAGNDRSM--LLTNCLFRLGGAAILLXXXXXXXXXXKYELVHTLRTH 311
           AL+V+ E  ++  Y   D  +  LL N LF  G AA ++                     
Sbjct: 168 ALIVACEFCSL-CYQPTDLGVGSLLCNGLFGDGIAAAVVRG------------------- 207
Query: 312 KGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLF--- 368
           +GG                  GV++ ++                G  ++P +E  +    
Sbjct: 208 RGG-----------------TGVRLERN----------------GSYLIPKTEDWIMYDV 234
Query: 369 TAT---LVARKIFKMKIKPYIPDFK-LAFEH---------FCIHAGGRAVLDEVEKHLKL 415
            AT    +  K     ++P  P  K LA EH         + +HAGG  +LD++   L++
Sbjct: 235 KATGFHFLLDKRVPATMEPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEV 294
Query: 416 NEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGF 466
           +      SR TL  +GN +S+ +   L     +G + +G +     FG G 
Sbjct: 295 DPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGI 345
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 Back     alignment and structure
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 Back     alignment and structure
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 Back     alignment and structure
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 Back     alignment and structure
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374 Back     alignment and structure
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 Back     alignment and structure
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 Back     alignment and structure
>pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 Back     alignment and structure
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 Back     alignment and structure
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 Back     alignment and structure
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 Back     alignment and structure
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 Back     alignment and structure
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 Back     alignment and structure
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 Back     alignment and structure
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 Back     alignment and structure
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413 Back     alignment and structure
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397 Back     alignment and structure
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 Back     alignment and structure
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 Back     alignment and structure
>pdb|1UB7|A Chain A, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier Protein] Synthase Iii (Fabh)from Thermus Thermophilus. Length = 322 Back     alignment and structure
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 Back     alignment and structure
>pdb|3FK5|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Iii, Fabh (Xoo4209) From Xanthomonas Oryzae Pv. Oryzae Kacc10331 Length = 338 Back     alignment and structure
>pdb|1HN9|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii Length = 317 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 1e-111
3oit_A387 OS07G0271500 protein; type III polyketide synthase 1e-104
3awk_A402 Chalcone synthase-like polyketide synthase; type I 2e-76
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 6e-74
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 4e-73
3v7i_A413 Putative polyketide synthase; type III polyketide 1e-72
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 1e-63
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 6e-62
1xes_A413 Dihydropinosylvin synthase; native structure, tran 2e-60
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 2e-49
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 5e-48
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 1e-45
1u0m_A382 Putative polyketide synthase; type III polyketide 2e-35
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 7e-35
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 3e-31
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 9e-11
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 1e-09
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 2e-07
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 8e-07
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 1e-06
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 3e-05
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 5e-05
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 9e-05
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 3e-04
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 4e-04
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 6e-04
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 7e-04
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 7e-04
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 8e-04
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 8e-04
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 Back     alignment and structure
 Score =  333 bits (855), Expect = e-111
 Identities = 64/379 (16%), Positives = 133/379 (35%), Gaps = 36/379 (9%)

Query: 106 NPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYV--------PKAMLDNP 157
            P +  S++      S       ET    K+I E+S +     V                
Sbjct: 23  VPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLE 82

Query: 158 AGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYK 217
                  + +K    +   A    L   G    DI  +V  +S     P ++  +++   
Sbjct: 83  TITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLG 142

Query: 218 LRGNILSYNLGGMGCSAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLT 277
           L  ++   +L  MGC AGL S+  A  L +  P +  LVV TE  ++++   +    ++ 
Sbjct: 143 LNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMVA 202

Query: 278 NCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHKGGDDRSYNCVSQQEDESKRIGVKIS 337
           + +F  G AA ++           YE++ ++         + N +    ++     + + 
Sbjct: 203 SSIFADGSAAYIIGCNPRIEETPLYEVMCSINRSFPN---TENAMVWDLEKEG-WNLGLD 258

Query: 338 KDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFC 397
             +  V G  ++  +                  TL+ +   +        D       F 
Sbjct: 259 ASIPIVIGSGIEAFVD-----------------TLLDKAKLQTSTAISAKDC-----EFL 296

Query: 398 IHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKT 457
           IH GG+++L  +E  L ++    + +    + +GN SS+ + + + +            +
Sbjct: 297 IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSK--SLPTYS 354

Query: 458 WQIAFGSGFKCNSAVWRAL 476
             +AFG G        + +
Sbjct: 355 ISLAFGPGLAFEGCFLKNV 373
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Length = 450 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query507
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 100.0
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 100.0
3oit_A387 OS07G0271500 protein; type III polyketide synthase 100.0
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 100.0
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 100.0
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 100.0
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 100.0
3v7i_A413 Putative polyketide synthase; type III polyketide 100.0
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 100.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 100.0
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 100.0
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 100.0
3awk_A402 Chalcone synthase-like polyketide synthase; type I 100.0
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 100.0
1xes_A413 Dihydropinosylvin synthase; native structure, tran 100.0
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 100.0
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 100.0
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 100.0
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 100.0
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 100.0
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 100.0
1u0m_A382 Putative polyketide synthase; type III polyketide 100.0
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 100.0
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 100.0
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 100.0
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 100.0
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 100.0
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 100.0
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 100.0
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 100.0
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 100.0
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 100.0
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 100.0
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.87
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 99.73
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 99.72
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 99.7
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.7
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.69
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.69
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.69
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.66
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.64
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.63
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.61
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.61
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.6
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.6
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.59
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.57
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 99.56
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.56
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.56
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 99.55
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 99.54
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.52
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.52
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 99.52
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.51
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.51
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 99.5
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 99.48
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 99.48
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 99.46
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.42
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.4
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.36
4egv_A 520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 98.92
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 98.71
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 98.32
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 97.68
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 97.24
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 96.86
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 93.14
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 93.12
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 92.54
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 92.48
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 92.18
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 91.96
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 91.92
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 91.09
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 90.97
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 90.77
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 90.67
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 90.65
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 90.57
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 90.48
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 89.95
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 89.69
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 89.16
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 88.73
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 88.11
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 88.07
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 87.83
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 87.52
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 87.32
1u0m_A382 Putative polyketide synthase; type III polyketide 86.83
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 84.67
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 84.38
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 83.04
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 80.86
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
Probab=100.00  E-value=7.2e-56  Score=457.54  Aligned_cols=330  Identities=21%  Similarity=0.293  Sum_probs=252.9

Q ss_pred             cCCCceEEEEeeEEeCCCCCccccHHHHHHHHHhccCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCccccHHHHHh
Q 045558           89 SRPRKVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARK  168 (507)
Q Consensus        89 ~~~~~V~Iv~~~~y~P~~~~~~v~~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~p~~~~~ma~~~~  168 (507)
                      .||...+|+++|+|+|+   ++|+|+|+.+.+..    ++      +||.+++||++|+++.++++     ..+|+    
T Consensus         9 ~~~~~srI~g~g~ylP~---~~v~n~el~~~~~~----~~------e~I~~rtGI~~R~~a~~~e~-----~~~la----   66 (350)
T 4ewp_A            9 ERPAASRIVAVGAYRPA---NLVPNEDLIGPIDS----SD------EWIRQRTGIVTRQRATAEET-----VPVMA----   66 (350)
T ss_dssp             CCCSEEEEEEEEEECCS---CEEEHHHHTTTTTC----CH------HHHHHHHCCSEEECCCSSCC-----HHHHH----
T ss_pred             cCCCCCEEEEEEEEcCC---CeEcHHHHHHHhCC----CH------HHHHhccCceEEEEcCCCCC-----HHHHH----
Confidence            47888999999999999   99999999775431    22      57889999999999988876     56777    


Q ss_pred             hhHHHHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHhcCCCCeEEEeecCCcchHHHHHHHHHHHHHH
Q 045558          169 ETEGVIIGAIDELLDKTGVKPRDIGILVVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQ  247 (507)
Q Consensus       169 ea~~l~~~Aa~~aL~~agi~~~dId~lI~~~-s~~~~~Psla~~v~~~lgl~~~~~~~dl~g~gCs~~l~AL~lA~~lL~  247 (507)
                            ++|+++||+++|++|+|||+||++| +++++.|+++++|+++||++ ++.+||++ +||+|++.||++|.++++
T Consensus        67 ------~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~  138 (350)
T 4ewp_A           67 ------VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVR  138 (350)
T ss_dssp             ------HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhh
Confidence                  9999999999999999999999996 57889999999999999998 67799999 799999999999999999


Q ss_pred             cCCCCeEEEEEeccCCCCCcCCCCchhhcccccccccceeEEEeccCCCcccccceeeeEEeeeecCCCCcccccccccc
Q 045558          248 LQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHKGGDDRSYNCVSQQED  327 (507)
Q Consensus       248 ~g~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lFgDGAaAvlLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~v~~~~d  327 (507)
                      +++.++||||++|.+|. +.++.||..   ..+|||||+|++|++.+...         +.....++|+..++.+..+..
T Consensus       139 ~g~~~~~Lvv~~E~~s~-~~d~~~~~~---~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~  205 (350)
T 4ewp_A          139 SGTARHVLVVGVERLSD-VVDPTDRSI---SFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHS  205 (350)
T ss_dssp             TTSCSEEEEEEEEEGGG-GCCTTCTTT---GGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSC
T ss_pred             CCCccceeEeeeeecee-ccccccccc---ccccccchheeeeecccCCC---------ccceeeeecccccceeeecCC
Confidence            99999999999999998 556677774   57999999999999876431         223445677777766554432


Q ss_pred             cccccceeechhhHHHHHHhhhhhhhccCCCcccchhhHHHHHHHHHHHHHHhhcccC----------ccchhhhccEEE
Q 045558          328 ESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPY----------IPDFKLAFEHFC  397 (507)
Q Consensus       328 ~~g~~g~~ls~d~~~~~g~~~k~ni~~lgp~vlp~~e~~~~~~~~~~~~v~~~~~~~~----------~~~~~~did~f~  397 (507)
                      ..     .. ++...    ..+.......  +.........++.|+++++++.+++.+          ....++|||||+
T Consensus       206 ~~-----~~-~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v  273 (350)
T 4ewp_A          206 QL-----EL-RDAVE----HARTTGDASA--ITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAAGVEPEDLAAFI  273 (350)
T ss_dssp             HH-----HH-HHHHH----HHHHHSCCTT--TTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             cc-----cc-Ccccc----cccccCCccc--cccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhhcCChhHhceEE
Confidence            10     00 01000    0000000000  000000000011122333332222110          122358999999


Q ss_pred             ecCCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEE
Q 045558          398 IHAGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDKTWQIAFGSGFKCNSAVWRA  475 (507)
Q Consensus       398 ~H~~~~~vi~~v~~~Lgl~~e~~~~S~~~l~~~GNtsSaSi~~~L~~~~~~g~l~~GD~VlliafGsG~~~~s~v~r~  475 (507)
                      +||+|+++++.+++.||++++++.  ..++++||||||+|+|+.|++++++|++++||+|++++||+||+|+++||||
T Consensus       274 ~Hq~~~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~vlr~  349 (350)
T 4ewp_A          274 PHQANMRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYGAQVVRL  349 (350)
T ss_dssp             ECCSCHHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEEEEEEEC
T ss_pred             ecCCCHHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeEEEEEEe
Confidence            999999999999999999999975  3689999999999999999999999999999999999999999999999997
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 507
d1teda_372 c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte 1e-46
d1u0ma1200 c.95.1.2 (A:2-201) Putative polyketide synthase SC 7e-30
d1bi5a1235 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med 3e-20
d1ee0a2160 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon 7e-20
d1u0ma2148 c.95.1.2 (A:202-349) Putative polyketide synthase 3e-19
d1u0ua2156 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S 8e-18
d1bi5a2154 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M 1e-17
d1u6ea2148 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 2e-11
d1ub7a2149 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa 2e-11
d1mzja2153 c.95.1.2 (A:184-336) Priming beta-ketosynthase fro 1e-10
d1hnja2143 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 1e-09
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  164 bits (416), Expect = 1e-46
 Identities = 62/366 (16%), Positives = 119/366 (32%), Gaps = 40/366 (10%)

Query: 113 RKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEG 172
           R+   ++  K  I    T       L+       +       +       M    +    
Sbjct: 45  RERIPRVYQKSRI---TTRRMAVDPLD-------AKFDVFRREPATIRDRMHLFYEHAVP 94

Query: 173 VIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGC 232
           + +      L     +  +IG+LV+ +S     P +   +V    L  +I    +  MGC
Sbjct: 95  LAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGC 154

Query: 233 SAGLISIDLAKQLLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSN 292
           +A + ++  A   ++  P   ALVV  E  ++N    +D + ++ + LF  G AA+++  
Sbjct: 155 AAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGA 214

Query: 293 RSSDRRRSKYELVHTLRTHKGGDDRSYNCVSQQEDESKRIGVKISKDLMAVAGEALKTNI 352
                +    ++V      +  D+     V                 +     E L   I
Sbjct: 215 SQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHN----------GITCELSENLPGYI 264

Query: 353 TTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKH 412
            +    V+                         I D       + IH GG  ++++  + 
Sbjct: 265 FSGVAPVVTE---------------MLWDNGLQISDID----LWAIHPGGPKIIEQSVRS 305

Query: 413 LKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKG-DKTWQIAFGSGFKCNSA 471
           L ++  +   S   L RFGN  S  L + L     +    K        AFG G      
Sbjct: 306 LGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGM 365

Query: 472 VWRALK 477
           ++  ++
Sbjct: 366 LFDIIR 371
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query507
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 100.0
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 100.0
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.98
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.98
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.97
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 99.97
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.97
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.95
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.88
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.86
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 99.86
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.85
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 99.85
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 99.85
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 99.84
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.84
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 98.87
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 98.86
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 98.83
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 98.74
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 98.73
d1xpma2221 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.68
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 98.68
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 98.59
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.4
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 98.32
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.14
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.1
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 97.96
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 96.66
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 96.08
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 95.69
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 94.87
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 94.09
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 91.62
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 89.73
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 89.72
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 88.18
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 85.7
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 85.41
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.8e-52  Score=431.97  Aligned_cols=351  Identities=17%  Similarity=0.205  Sum_probs=265.4

Q ss_pred             ceEEEEeeEEeCCCCCccccHHHHHHHHHhccCCChhhHHHHHHHHHHhCCCceEeccCCCc-------CCCC-ccccHH
Q 045558           93 KVYLVNFACYKPGNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAML-------DNPA-GEKNMA  164 (507)
Q Consensus        93 ~V~Iv~~~~y~P~~~~~~v~~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~-------~~p~-~~~~ma  164 (507)
                      ..+|.++|+|+|+   ++|+|+|+.+.+..... +++..+.+.||++++||++||++.+...       ..|+ ....++
T Consensus        11 ~a~I~g~g~~~P~---~~v~n~e~~~~~~~~~~-~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~   86 (372)
T d1teda_          11 VAVIEGLATGTPR---RVVNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMH   86 (372)
T ss_dssp             EEEEEEEEEECCS---CEEEHHHHHHHHHTC-----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHH
T ss_pred             eEEEEEEEEeCCC---eEEcHHHHHHHHHhhcC-ChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHH
Confidence            4789999999999   99999999999875422 2233456788999999999999743321       1122 122356


Q ss_pred             HHHhhhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHhcCCCCeEEEeecCCcchHHHHHHHHHHH
Q 045558          165 EARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQ  244 (507)
Q Consensus       165 ~~~~ea~~l~~~Aa~~aL~~agi~~~dId~lI~~~s~~~~~Psla~~v~~~lgl~~~~~~~dl~g~gCs~~l~AL~lA~~  244 (507)
                      .+.+++.+|+++|+++||+++|++|+|||+||++|++++..|+++++|+++||+++++..++++++||+|++.||++|.+
T Consensus        87 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~  166 (372)
T d1teda_          87 LFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATN  166 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHH
Confidence            67899999999999999999999999999999997778899999999999999998899999987899999999999999


Q ss_pred             HHHcCCCCeEEEEEeccCCCCCcCCCCchhhcccccccccceeEEEeccCCCcccc-cceeeeEEeeeecCCCCcccccc
Q 045558          245 LLQLQPNSYALVVSTENLTMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRS-KYELVHTLRTHKGGDDRSYNCVS  323 (507)
Q Consensus       245 lL~~g~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lFgDGAaAvlLs~~~~~~~~~-~~~l~~~v~t~~~~d~~~~~~v~  323 (507)
                      ++++++.++||||++|.+|.++...++.....+.++|||||+|+||++++...... .+.....-.++...+.  .+.+.
T Consensus       167 ~l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  244 (372)
T d1teda_         167 YVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNT--EDGIV  244 (372)
T ss_dssp             HHHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTC--TTSEE
T ss_pred             HHhcCCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCceeEEecccccccCCC--ccccc
Confidence            99999999999999999998665555555555678999999999999876542211 1111111111111111  11111


Q ss_pred             cccccccccceeechhhHHHHHHhhhhhhhccCCCcccchhhHHHHHHHHHHHHHHhhcccCccchhhhccEEEecCCCH
Q 045558          324 QQEDESKRIGVKISKDLMAVAGEALKTNITTLGPLVLPMSEQLLFTATLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGR  403 (507)
Q Consensus       324 ~~~d~~g~~g~~ls~d~~~~~g~~~k~ni~~lgp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~  403 (507)
                      ... ++++.-+..+++++....+.+.                      ...+++++.     .+...+|||+|++||+|+
T Consensus       245 ~~~-~~~~~~~~~~~~~~~~~~~~~~----------------------~~i~~~L~~-----~gl~~~did~~i~Hq~~~  296 (372)
T d1teda_         245 LGV-NHNGITCELSENLPGYIFSGVA----------------------PVVTEMLWD-----NGLQISDIDLWAIHPGGP  296 (372)
T ss_dssp             EEE-ETTEEEEEECTTHHHHHHHHHH----------------------HHHHHHHHH-----TTCCGGGCSCEEECCSCH
T ss_pred             cCC-CCCcceeechHHHHHHHHHHHH----------------------HHHHHHHHh-----cCCCHHHhhhhhccCccH
Confidence            111 1122233344444443322111                      111233322     122358999999999999


Q ss_pred             HHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCC-CEEEEEEeChhHHhhheeeEEec
Q 045558          404 AVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKG-DKTWQIAFGSGFKCNSAVWRALK  477 (507)
Q Consensus       404 ~vi~~v~~~Lgl~~e~~~~S~~~l~~~GNtsSaSi~~~L~~~~~~g~l~~G-D~VlliafGsG~~~~s~v~r~~~  477 (507)
                      ++++.+++.||++++++..|+.++.+||||+|+|+|+.|++++++|++++| |++++++||+|++|++++||+++
T Consensus       297 ~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~  371 (372)
T d1teda_         297 KIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR  371 (372)
T ss_dssp             HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred             HHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhheeec
Confidence            999999999999999998778889999999999999999999999998776 89999999999999999999986
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure