Citrus Sinensis ID: 045682

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MSSILRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSCA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccEEEcHHHHHHHHcccccccccccccccEEEEEEEcccEEEEEEccccccHHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEEEcccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccEEHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEEccccccccccEEEEcccccccHccccccccccccccEcHHHHHHHHccccHHccccccccccEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHcHHHEEEEEcccccEEEEEEEcccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHcHEEEccccccHHcHHHHHHHcHHEEEEccccccccccccccccHHHHHHHHHHHHHcccHHHHccHHHcccccccccHHHHHHHHHHHHHHHcccHcccccHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MSSILRKFKlreqtqstdkaTFVIRNGESVLKELIRasngkynpyctfsAKELEIAtnnydsekvIMKRSFYTLYKGFCQERLISVmkfdaskprmydccinNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCgsladririqhnpqpqhepllLTHRLKIAKDIANAIAYLhvgfprpvifrdfklsnilfneenvaklfdfsfsisipegelltglrafdLARLNEDDGYVALRDHVKKYFEedrlneiidplimgdrscsgkEQQLQAYAHLIFECvnespvdrptMVDVAKKLKQMYRSCA
Flexible Loop (DISEMBL)
mssilrkfklreqtqstdkatfvirnGESVLKELirasngkynpYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECvnespvdrpTMVDVAKKLKQMYRSCA
Low Complexity Region (SEG)
MSSILRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSCA
Disordered region (IsUnstruct)
*******************ATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNES**********************
Disordered Region (DISOPRED)
MSSILRKFK*************************************TFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAF*****N***GYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS**
Disordered Region (DISEMBL)
MSSILRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSCA
Disordered Region (DISPRO)
MSSILRKFKLREQTQSTDKATFVIRN**************KYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSILRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSCA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	309	2.2.26 [Sep-21-2011]
Q9LSV3	433	Putative wall-associated	no	no	0.951	0.678	0.286	4e-32
O64798	389	Inactive serine/threonine	no	no	0.880	0.699	0.318	2e-31
Q9LMT9	764	Putative wall-associated	no	no	0.919	0.371	0.312	4e-31
Q9M092	786	Wall-associated receptor	no	no	0.873	0.343	0.307	1e-30
Q9LMN6	738	Wall-associated receptor	no	no	0.919	0.384	0.290	1e-29
Q0WNY5	793	Wall-associated receptor	no	no	0.938	0.365	0.315	2e-29
Q9LMN8	741	Wall-associated receptor	no	no	0.915	0.381	0.296	2e-29
Q8VYA3	769	Wall-associated receptor	no	no	0.935	0.375	0.3	2e-29
Q8RY17	751	Wall-associated receptor	no	no	0.889	0.366	0.309	2e-29
Q9SA25	720	Wall-associated receptor	no	no	0.915	0.393	0.311	3e-29

>sp|Q9LSV3|WAKLS_ARATH Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1

 Score =  138 bits (348), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 164/339 (48%), Gaps = 45/339 (13%)

Query: 3   SILRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDS 62
           S ++  +  ++     +  F  +NG  +L E +  +      +  F+ ++++ ATN YD 
Sbjct: 51  SYIKNIRKHQKDTKIQRQLFFEKNGGGMLIERLSGAGSSNIDFKIFTEEDMKEATNGYDV 110

Query: 63  EKVIMKRSFYTLYKGFCQER-LISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGC 121
            +++ +   +T+YKG   +  ++++ K         +  IN ++  SQ+ HR   KL+GC
Sbjct: 111 SRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGC 170

Query: 122 CLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
           CLET++P+LV+E+I  GSL D +   H        L   HRL+IA ++A AIAYLH G  
Sbjct: 171 CLETEVPLLVYEFITGGSLFDHL---HGSMFV-SSLTWEHRLEIAIEVAGAIAYLHSGAS 226

Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIP-EGELLTGLRAFDLARLNED------- 233
            P+I RD K  NIL +E   AK+ DF  S   P + E LT +    L  L+ +       
Sbjct: 227 IPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLL 286

Query: 234 -----------------DGYVAL-------RDHVKKYF----EEDRLNEIIDPLIMGDRS 265
                             G  AL         H+  YF    +E+RL+EIID  ++ + +
Sbjct: 287 NEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEEN 346

Query: 266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
               ++++   A +  EC      +RP M++VA +L+ +
Sbjct: 347 ----QREIHEAARVAVECTRLKGEERPRMIEVAAELETL 381

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|O64798|Y1747_ARATH Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1

 Score =  136 bits (343), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 159/327 (48%), Gaps = 55/327 (16%)

Query: 19  KATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSF---YTLY 75
           K+      G  +LK+LI   +GK NP   FSA E+  ATNN+    ++ + S    Y  Y
Sbjct: 11  KSEIASERGAKLLKDLIECCDGKSNPIKFFSADEIRKATNNFGVSNLVSELSHDFDYKWY 70

Query: 76  KGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI--HRCFFKLIGCCLETQIPILVFE 133
            G  +   + +++   S+   Y       +  S M+  H+ F KLIG CLE + P++V+ 
Sbjct: 71  SGKNENHDMILVRKAFSQSVYYKDTFFRDIAVSSMVSGHKNFLKLIGYCLEFEEPVMVYH 130

Query: 134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN 193
                 +     ++ + QP         R+KIA+DIA A+AYLH  FPRP ++R   L+N
Sbjct: 131 -----GVKKHYHLESSEQP------WKRRMKIAEDIATALAYLHTAFPRPFVYRCLSLTN 179

Query: 194 ILFNEENVAKLFDFSFSISIPEGELLTGLR----AFDLARLN--------EDDGYVALRD 241
           IL +E+ VAKL DFSF +SIPEGE    +       D  + N        E+    A+  
Sbjct: 180 ILLDEDGVAKLMDFSFCVSIPEGETFVQVDYIAGTVDYLKPNYLKHGVVSEETDVFAVGH 239

Query: 242 HVK--------------------KYFEEDRLNEIIDPLIMGDRSCSGKEQ--QLQAYAHL 279
            ++                    K+ EE +++EI DP  MG+ S   +E+  Q++A+  L
Sbjct: 240 SMQMLLMGEKIFDRIMRRPFPTSKFMEEPKMDEIADPE-MGEIS---EEELCQMKAFLLL 295

Query: 280 IFECVNESPVDRPTMVDVAKKLKQMYR 306
              C      + PTMV+VAK+LK + R
Sbjct: 296 SLRCTGHVG-EVPTMVEVAKELKSIQR 321

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LMT9|WAKLL_ARATH Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=2 SV=1

 Score =  135 bits (339), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 164/336 (48%), Gaps = 52/336 (15%)

Query: 10  LREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKR 69
           LR++  +  K  F  RNG  +L++ +  + G+      FS++ELE AT+N++  +VI + 
Sbjct: 404 LRKRRMTNRKRKFFKRNGGLLLQQQLNTTQGRVEKTKLFSSRELEKATDNFNDNRVIGQG 463

Query: 70  SFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP 128
              T+YKG     R ++V K +          IN ++  SQ+ HR   KL+GCCLET++P
Sbjct: 464 GQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVP 523

Query: 129 ILVFEYINCGSLADRIRIQH-NPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR 187
           ILV+E+I  G+L      QH + +      L   R++IA DI+ A +YLH     P+  R
Sbjct: 524 ILVYEFIPNGNL-----FQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHR 578

Query: 188 DFKLSNILFNEENVAKLFDFSFSISI-------------------PE------------- 215
           D K +NIL +E+  AK+ DF  S S+                   PE             
Sbjct: 579 DIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDV 638

Query: 216 -------GELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSG 268
                   EL+TG +   +  L+E      L D+ +    E+RL EIID  I  D  C  
Sbjct: 639 YSFGVVLVELITGEKP--VITLSETQEITGLADYFRLAMRENRLFEIIDARIRND--C-- 692

Query: 269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
           K +Q+ A A+L   C+ ++   RP M +V+  L+++
Sbjct: 693 KLEQVIAVANLALRCLKKTGKTRPDMREVSTALERI 728

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9M092|WAKLM_ARATH Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=3 SV=2

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 159/325 (48%), Gaps = 55/325 (16%)

Query: 26  NGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLI 84
           NG  +L++ +    G       F++KELE AT N+   +V+      T+YKG     R +
Sbjct: 410 NGGLLLQQELNTRQGVVEKARIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTV 469

Query: 85  SVMK---FDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
           +V K    D  K + +   IN +V  SQ+ HR   KL+GCCLET++PILV+E+I  G+L 
Sbjct: 470 AVKKSKVIDEDKLQEF---INEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLF 526

Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
             I   H  +     ++   RL+IA DIA A++YLH     P+  RD K +NIL +E+  
Sbjct: 527 KHI---HEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYR 583

Query: 202 AKLFDFSFSISI-------------------PE--------------------GELLTGL 222
           AK+ DF  S S+                   PE                     EL+TG 
Sbjct: 584 AKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGD 643

Query: 223 RAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFE 282
           +   + +  ++   +AL +H +   +E RL++I+D  I  D     K +Q+ A A+L  +
Sbjct: 644 KPVIMVQNTQE--IIALAEHFRVAMKERRLSDIMDARIRDDS----KPEQVMAVANLAMK 697

Query: 283 CVNESPVDRPTMVDVAKKLKQMYRS 307
           C++    +RP M +V  +L+++  S
Sbjct: 698 CLSSRGRNRPNMREVFTELERICTS 722

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN6|WAK4_ARATH Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 164/337 (48%), Gaps = 53/337 (15%)

Query: 9   KLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMK 68
           K++    +  +  F  +NG  +L + +  +         F+ + ++ AT+ YD  +++ +
Sbjct: 359 KMKNTKDTELRQQFFEQNGGGMLMQRLSGAGPSNVDVKIFTEEGMKEATDGYDENRILGQ 418

Query: 69  RSFYTLYKGFCQERLISVMKFDASKPRMYDCC-----INNIVYASQMIHRCFFKLIGCCL 123
               T+YKG   +  I  +K    K R+ D       IN ++  SQ+ HR   KL+GCCL
Sbjct: 419 GGQGTVYKGILPDNSIVAIK----KARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCL 474

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
           ET++P+LV+E+I+ G+L D +   H        L   HRL++A +IA  +AYLH     P
Sbjct: 475 ETEVPLLVYEFISSGTLFDHL---HGSMFD-SSLTWEHRLRMAVEIAGTLAYLHSSASIP 530

Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISIP--EGELLTGLRA---------FDLARLNE 232
           +I RD K +NIL +E   AK+ DF  S  IP  + +L T ++          ++   LNE
Sbjct: 531 IIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNE 590

Query: 233 D--------------DGYVAL-------RDHVKKYF----EEDRLNEIIDPLIMGDRSCS 267
                           G  AL         H+  YF    +E+RL+EIID  +M + +  
Sbjct: 591 KSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENN-- 648

Query: 268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
             ++++Q  A +  EC   +  +RP M +VA +L+ +
Sbjct: 649 --QREIQKAARIAVECTRLTGEERPGMKEVAAELEAL 683

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q0WNY5|WAKLN_ARATH Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1

 Score =  130 bits (326), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 167/346 (48%), Gaps = 56/346 (16%)

Query: 5   LRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEK 64
           LRKF L ++  +  K  F  RNG  +L + +    G       F+++ELE AT N+   +
Sbjct: 399 LRKF-LIKRRITKRKKKFFKRNGGLLLLQELNTREGYVEKTRVFNSRELEKATENFSENR 457

Query: 65  VIMKRSFYTLYKG-FCQERLISVMK---FDASKPRMYDCCINNIVYASQMIHRCFFKLIG 120
           V+      T+YKG     R ++V K    D  K + +   IN +V  SQ+ HR   KL+G
Sbjct: 458 VLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEF---INEVVILSQINHRHVVKLLG 514

Query: 121 CCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF 180
           CCLET++P+LV+E+I  G+L   I   H  +     +L   RL+IA DIA A++YLH   
Sbjct: 515 CCLETEVPMLVYEFIINGNLFKHI---HEEESDDYTMLWGMRLRIAVDIAGALSYLHSSA 571

Query: 181 PRPVIFRDFKLSNILFNEENVAKLFDFSFSISI-------------------PE------ 215
             P+  RD K +NIL +E+  AK+ DF  S S+                   PE      
Sbjct: 572 SSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQ 631

Query: 216 --------------GELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIM 261
                          EL+TG +   + +  ++   VAL +H +   +E RL +IID  I 
Sbjct: 632 YTEKSDVYSFGVILAELITGDKPVIMVQNTQE--IVALAEHFRVAMKEKRLTDIIDARIR 689

Query: 262 GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
            D  C  K +Q+ A A +  +C++     RP M +V  +L+++  S
Sbjct: 690 ND--C--KPEQVMAVAKVAMKCLSSKGKKRPNMREVFTELERICTS 731

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2

 Score =  130 bits (326), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 163/337 (48%), Gaps = 54/337 (16%)

Query: 6   RKF-KLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEK 64
           RK+ KLR Q        F  +NG  +L + +  +      +  F+ + ++ ATN YD  +
Sbjct: 368 RKYTKLRRQ--------FFEQNGGGMLIQRLSGAGLSNIDFKIFTEEGMKEATNGYDESR 419

Query: 65  VIMKRSFYTLYKGFCQER-LISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL 123
           ++ +    T+YKG   +  ++++ K   +  R  D  I+ ++  SQ+ HR   K++GCCL
Sbjct: 420 ILGQGGQGTVYKGILPDNTIVAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCL 479

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
           ET++P+LV+E+I  G+L D +    +       L   HRL+IA ++A  +AYLH     P
Sbjct: 480 ETEVPLLVYEFITNGTLFDHL----HGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIP 535

Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISIP-EGELLTGLRAFDLARLNED--------- 233
           +I RD K +NIL +E   AK+ DF  S  IP + E LT +    L  L+ +         
Sbjct: 536 IIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNE 595

Query: 234 ---------------DGYVAL-------RDHVKKYF----EEDRLNEIIDPLIMGDRSCS 267
                           G  AL         H+  YF    EE+RL+EIID  ++ + +  
Sbjct: 596 KSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNL- 654

Query: 268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
              +++Q  A +  EC      +RP M +VA KL+ +
Sbjct: 655 ---KEIQEAARIAAECTRLMGEERPRMKEVAAKLEAL 688

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8VYA3|WAKLJ_ARATH Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1

 Score =  130 bits (326), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 51/340 (15%)

Query: 5   LRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEK 64
           L KF +R Q +   K  F  RNG  +L++ +  + G  +    F+++ELE AT N+   +
Sbjct: 379 LYKF-IRRQRRLNQKKKFFKRNGGLLLQQQLTTTEGNVDSTRVFNSRELEKATENFSLTR 437

Query: 65  VIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL 123
           ++ +    T+YKG     R+++V K         +  IN +V  SQ+ HR   KL+GCCL
Sbjct: 438 ILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCL 497

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
           ET +PILV+E+I  G+L + +   H+    +       RL+IA DIA A++YLH     P
Sbjct: 498 ETDVPILVYEFIPNGNLFEHL---HDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSP 554

Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISI-------------------PE--------- 215
           +  RD K +NI+ +E++ AK+ DF  S ++                   PE         
Sbjct: 555 IYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTD 614

Query: 216 -----------GELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDR 264
                       EL+TG ++    R  E   Y  L  +     +E+RL++IID  I    
Sbjct: 615 KSDVYSFGVVLAELITGEKSVSFLRSQE---YRTLATYFTLAMKENRLSDIIDARIR--D 669

Query: 265 SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
            C  K  Q+ A A +  +C+N     RP+M  V+ +L+++
Sbjct: 670 GC--KLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKI 707

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RY17|WAKLI_ARATH Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 159/326 (48%), Gaps = 51/326 (15%)

Query: 22  FVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQ 80
           F  RNG  +LK+ +    G       FS+KELE AT+N++  +V+ +    T+YKG    
Sbjct: 383 FFKRNGGLLLKQQLTTRGGNVQSSKIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVD 442

Query: 81  ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL 140
            R+++V +         +  IN +   SQ+ HR   KL+GCCLET++PILV+E+I  G L
Sbjct: 443 GRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDL 502

Query: 141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN 200
             R+   H+    +  +    RL+I+ +IA A+AYLH     PV  RD K +NIL +E+ 
Sbjct: 503 FKRL---HHDSDDYT-MTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKY 558

Query: 201 VAKLFDFSFSISI-------------------PE--------------------GELLTG 221
            AK+ DF  S SI                   PE                     EL+TG
Sbjct: 559 RAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITG 618

Query: 222 LRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIF 281
            + F + R  E+ G V+   H  +  +++R+ +I+D  I     C+   +Q+ A A L  
Sbjct: 619 EKPFSVMRPEENRGLVS---HFNEAMKQNRVLDIVDSRI--KEGCT--LEQVLAVAKLAR 671

Query: 282 ECVNESPVDRPTMVDVAKKLKQMYRS 307
            C++     RP M +V+ +L+++  S
Sbjct: 672 RCLSLKGKKRPNMREVSVELERIRSS 697

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Required during plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1

 Score =  129 bits (323), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 164/334 (49%), Gaps = 51/334 (15%)

Query: 11  REQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRS 70
           R++  +  K  F  RNG  +L++     +G  N    FS+ +LE AT+ +++ +++ +  
Sbjct: 341 RKRKVAKQKRKFFQRNGGLLLQQQTSFLHGSVNRTKVFSSNDLENATDRFNASRILGQGG 400

Query: 71  FYTLYKGFCQERLI-SVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI 129
             T+YKG  ++ +I +V K  A K    +  IN I+  SQ+ HR   K++GCCLET++PI
Sbjct: 401 QGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPI 460

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LV+E+I   +L D +   HNP  +  P+    RL IA ++A+A++YLH     P+  RD 
Sbjct: 461 LVYEFIPNRNLFDHL---HNPS-EDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDV 516

Query: 190 KLSNILFNEENVAKLFDFSFSISI-------------------PEG-------------- 216
           K +NIL +E++ AK+ DF  S S+                   PE               
Sbjct: 517 KSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYS 576

Query: 217 ------ELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKE 270
                 ELLTG +   L R  E      L  +  +    DRL+EI+D  I     C    
Sbjct: 577 FGVLLIELLTGEKPVSLLRRQE---VRMLGAYFLEAMRNDRLHEILDARI--KEECD--R 629

Query: 271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
           +++ A A L   C++ +   RPTM DV  +L +M
Sbjct: 630 EEVLAVAKLARRCLSLNSEHRPTMRDVFIELDRM 663

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
224123144	344	predicted protein [Populus trichocarpa]	0.938	0.843	0.413	2e-64
255582635	331	receptor protein kinase, putative [Ricin	0.893	0.833	0.428	1e-61
255542662	330	serine-threonine protein kinase, plant-t	0.922	0.863	0.391	1e-53
255542656	331	serine-threonine protein kinase, plant-t	0.870	0.812	0.376	1e-47
255542658	356	serine-threonine protein kinase, plant-t	0.928	0.806	0.360	5e-46
359493231	497	PREDICTED: inactive serine/threonine-pro	0.909	0.565	0.346	1e-41
296081092	1111	unnamed protein product [Vitis vinifera]	0.909	0.252	0.346	2e-41
224061837	329	predicted protein [Populus trichocarpa]	0.883	0.829	0.368	7e-40
255542676	247	serine-threonine protein kinase, plant-t	0.715	0.894	0.423	5e-39
22331843	355	putative protein kinase [Arabidopsis tha	0.961	0.836	0.329	3e-38

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/336 (41%), Positives = 201/336 (59%), Gaps = 46/336 (13%)

Query: 12  EQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSF 71
           ++ +  +K T  I+NG  +L++L+   +GK N   +FSA EL+ ATNNYD +K++   S 
Sbjct: 8   KKDKKVNKETAFIKNGSKLLEKLVDICDGKCNSIRSFSATELKKATNNYDPQKILTGDSG 67

Query: 72  YTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPIL 130
           Y LYKGF Q R +SV KF       Y+ C N+IVYAS+M +H+ F KL+GCCLE +IPIL
Sbjct: 68  YKLYKGFLQGRPVSVKKF-KDDDEQYEYCFNDIVYASKMSVHKSFMKLLGCCLEARIPIL 126

Query: 131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFK 190
           VFEY+   +L+D   +  + + + +PLL   R KIA D+ANA+A+LH  F +P++FR+ K
Sbjct: 127 VFEYVGDWTLSD--FLWGSEEARCQPLLWIPRSKIAMDMANAVAFLHAAFSKPIVFRNIK 184

Query: 191 LSNILFNEENVAKLFDFSFSISIPEGE--------------------------------- 217
             NIL ++ + AKL DFS SISIP+GE                                 
Sbjct: 185 PLNILLDDNHEAKLSDFSISISIPKGESHVRDSVAGATGLIAPEYLTTGNFNEKQDVFNF 244

Query: 218 ------LLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQ 271
                 LL+G    D +R  ++   + L+DHVKK  E+DR N++ID  I+ + +  GKEQ
Sbjct: 245 GVFLLVLLSGQMVVDFSRPEKE---ILLQDHVKKCIEDDRFNKVIDSTIIAEGTWPGKEQ 301

Query: 272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
           QLQAY  L   C++E   DRPTM+DV+K+L+++Y S
Sbjct: 302 QLQAYTALSLRCISELAEDRPTMIDVSKELRKIYWS 337

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 190/322 (59%), Gaps = 46/322 (14%)

Query: 24  IRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERL 83
           + NG  +L++LI + +G+ NP   FSA EL  AT++YD  K+I + S Y LY G   ER 
Sbjct: 13  LMNGRMLLEKLIASCDGRCNPIRIFSADELSRATDDYDPRKIITQDSGYKLYNGLLHERT 72

Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYINCGSLAD 142
           ISV KF   K   Y  C N+I++A+QM  H+ F KL+GCCLETQIP+LVFE I  G+LA 
Sbjct: 73  ISVKKF-KDKSEQYKYCYNDIMFATQMSKHKNFLKLLGCCLETQIPVLVFEPIEYGTLAG 131

Query: 143 RIRIQHNPQPQ-HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
           R+   + P    ++PLL  HRLKIA +IANA++YLH  F RP++FR+ K  NI  +E +V
Sbjct: 132 RL---YGPNKTLYQPLLWRHRLKIAVEIANAVSYLHTAFSRPIVFRNIKPLNIFLDECHV 188

Query: 202 AKLFDFSFSISIPEGE---------------------------------------LLTGL 222
           AKL DFS ++SIPEGE                                       LLTG 
Sbjct: 189 AKLSDFSLAVSIPEGESHVKDMLAGAWGLIAPEYAKTSCFNESQDVYNFGVFLLMLLTGQ 248

Query: 223 RAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFE 282
           +  D  R    +  + L DHVKK+  +DR  E +D +I+G+ S   K+QQLQA+  L F 
Sbjct: 249 KVVDSYRPQAGEE-LGLVDHVKKFIADDRFYETVDSIILGEGSLPEKDQQLQAFTLLSFR 307

Query: 283 CVNESPVDRPTMVDVAKKLKQM 304
           C++E+  DRP M+DVAK+L+++
Sbjct: 308 CISEADEDRPMMIDVAKELRKI 329

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/332 (39%), Positives = 188/332 (56%), Gaps = 47/332 (14%)

Query: 19  KATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGF 78
           K  F+I NG  +L++ +   NG+ NP   FS++ELE AT NY+ ++V+    ++ LYKGF
Sbjct: 4   KEAFLI-NGSKLLEKSVAFCNGRCNPIRNFSSEELEKATRNYNEKQVLKLDGYFELYKGF 62

Query: 79  CQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC 137
            Q+R + V KF   +  +    IN IVYAS M +H    KL+GCCLET  PILVFE    
Sbjct: 63  LQDRPVIVKKF--LEVGVEQLAINEIVYASAMSVHINSIKLLGCCLETPSPILVFESAKE 120

Query: 138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN 197
            +LADRI I  N     EP+    RLKI  DIAN + Y+H  FPRP++ R+ K SNIL +
Sbjct: 121 KTLADRI-IDRNDD-HFEPVKWKLRLKIVADIANVVVYIHTAFPRPIVHRNIKASNILLD 178

Query: 198 EENVAKLFDFSFSISIPEGE---------------------------------------L 218
           E+ VAKL DFS  +SIPEG+                                       +
Sbjct: 179 EDYVAKLSDFSLCVSIPEGKSRVRDIMAGTMGLIASESLATGYFNEKSDVYSFGVVLLVV 238

Query: 219 LTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAH 278
           LTG R+FD +R    + ++ L +HVKK+ E     E++DP+I+ + + + K Q+L+ +  
Sbjct: 239 LTGQRSFDFSRTETGEQFL-LVNHVKKHIETGGFKEMVDPIIVAEEAGNRKGQELEDFRD 297

Query: 279 LIFECVNESPVDRPTMVDVAKKLKQMY-RSCA 309
           L   C+++S  +RPTM++VAK+L+ +Y  SCA
Sbjct: 298 LALRCIHDSAEERPTMIEVAKQLRHIYLSSCA 329

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542656|ref|XP_002512391.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548352|gb|EEF49843.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/329 (37%), Positives = 173/329 (52%), Gaps = 60/329 (18%)

Query: 23  VIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQER 82
           ++RNG S+L++ +  +NG+ NP   FS KEL+ ATN+Y    V        LYKG  ++R
Sbjct: 14  LMRNGRSLLEKSVALNNGRGNPVRCFSVKELQNATNSYSQHNVFYIDGTCRLYKGLIRDR 73

Query: 83  LISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
            + V K+D   P   +  +++IV AS+M +HR   KL+GCCLE++IPI VFEY   G+L 
Sbjct: 74  PVIVKKYDYKHPS--EDPVSDIVIASEMSVHRNVLKLLGCCLESEIPIPVFEYAEKGTLE 131

Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
           D +        Q   LL   RLKIA D+A+ IAYLH  FPRP++ RD  L++IL +E+  
Sbjct: 132 DYV--------QKTALLWKDRLKIAVDVASVIAYLHTAFPRPIVHRDISLASILLDEDCA 183

Query: 202 AKLFDFSFSISIPEGE---------------------------------------LLTG- 221
           AK+  FS SISIPEGE                                       LLTG 
Sbjct: 184 AKVTGFSLSISIPEGETHIEDEVAGTIGYVAPEYFMKRMFNEKIDVYSFGVVLLVLLTGH 243

Query: 222 ---LRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAH 278
              LR+      NE    V     V+   + +R NEIIDP I+ +     KEQQL+++  
Sbjct: 244 GPILRS---PTTNESHALVVF---VEAKIKNERFNEIIDPAILEEGPWPEKEQQLKSFLT 297

Query: 279 LIFECVNESPVDRPTMVDVAKKLKQMYRS 307
           L  +C  +   DRP + DVAK+L+ +Y S
Sbjct: 298 LAMQCTRKDEEDRPEITDVAKQLRHIYHS 326

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  190 bits (483), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 179/347 (51%), Gaps = 60/347 (17%)

Query: 18  DKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKG 77
           +  T ++RNG  +L++ I  +NG+ NP   FS  EL+ ATN+Y    VI +  ++TLYKG
Sbjct: 11  ENETALMRNGGILLEKSIAFNNGRGNPIRWFSVDELQTATNSYSQNNVIYEGGWHTLYKG 70

Query: 78  FCQERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYIN 136
           F ++R + V ++  +      C IN+IV+AS+M  H+   KL+GCCLE++IPILVFEY  
Sbjct: 71  FLRDRPVIVKRYRNNIHERV-CPINDIVFASEMSRHKNVLKLLGCCLESEIPILVFEYAE 129

Query: 137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF 196
            G L D I           PLL   RLKIA D AN IAYLH   PRPV+ RD  LSNI  
Sbjct: 130 KGKLQDYI--YKTDSASFRPLLWKSRLKIAVDAANVIAYLHTACPRPVVHRDITLSNIWL 187

Query: 197 NEENVAKLFDFSFSISIPEGE--------------------------------------- 217
           +E+ VAK+ DF+ S+SI EGE                                       
Sbjct: 188 DEDYVAKVTDFTVSMSILEGETHIEDFVLGTCGYAAPEYVRSGIFNEKIDVFSFGVLLLV 247

Query: 218 LLTGLRAFDL--------ARLNE-------DDGYVALRDHVKKYFEEDR--LNEIIDPLI 260
           LLT  + F          AR +E       + G  + ++ ++ +    R  L+  IDP+I
Sbjct: 248 LLTDQKPFQGNWENILKDARFDEIIGSLIVEKGLWSEKEQLETFLTRTRQKLDLTIDPII 307

Query: 261 MGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
           + +     KEQQL+A+  L  +C++    +RP + DVAK+L+  Y S
Sbjct: 308 VEEGPWPEKEQQLKAFLMLGVQCIDPDEENRPEITDVAKQLRHFYLS 354

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493231|ref|XP_002265528.2| PREDICTED: inactive serine/threonine-protein kinase At1g67470-like [Vitis vinifera]

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 168/332 (50%), Gaps = 51/332 (15%)

Query: 22  FVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQE 81
           F ++NG  +L++L+ + NG+ NP   FS KELE ATN Y+S  +  + ++   YKG  + 
Sbjct: 8   FFLKNGSLLLEKLVSSLNGRSNPIRNFSIKELEQATNKYNSSLIFDRWTYSEWYKGSLEG 67

Query: 82  RLISVMKFDASKPRMYDC----CINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYIN 136
           R +SV KF    P + D      I  I +A+Q+  H+   KL GCCLETQ P+LV+EY  
Sbjct: 68  RFVSVRKF---HPVIDDAFLERVIKEITFATQLSAHKNVLKLFGCCLETQTPVLVYEYPV 124

Query: 137 CG--SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
            G   L D I    + + +   L    RL+I+ DIA+ IAYLH  FPR +I R+  LS  
Sbjct: 125 NGVVPLYDVIHPSTDGKSRQR-LPWKSRLRISGDIAHVIAYLHTAFPRAIIHREVTLSFF 183

Query: 195 LFNEENVAKLFDFSFSISIPEG-------------------------------------- 216
             +E+ V KL +F F+I++PEG                                      
Sbjct: 184 FLDEDCVPKLSNFFFAIALPEGRKYVVDGVMGIEGFIAPEYEMTGMVTEKVDVFSFGKLL 243

Query: 217 -ELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQA 275
            ELLTG R  D   L  +DG + L+D +K Y E+  L+  +D  I+       +E QL A
Sbjct: 244 LELLTGRRTIDFGPLG-NDGELLLQDCIKTYVEDHELDGFVDASILPRGGEIHEELQLLA 302

Query: 276 YAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
              L   C+  +   RPTMV++AK+L+++ R 
Sbjct: 303 VTKLALRCIMTAAEQRPTMVEIAKELRRIQRG 334

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081092|emb|CBI18286.3| unnamed protein product [Vitis vinifera]

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 168/332 (50%), Gaps = 51/332 (15%)

Query: 22  FVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQE 81
           F ++NG  +L++L+ + NG+ NP   FS KELE ATN Y+S  +  + ++   YKG  + 
Sbjct: 622 FFLKNGSLLLEKLVSSLNGRSNPIRNFSIKELEQATNKYNSSLIFDRWTYSEWYKGSLEG 681

Query: 82  RLISVMKFDASKPRMYDC----CINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYIN 136
           R +SV KF    P + D      I  I +A+Q+  H+   KL GCCLETQ P+LV+EY  
Sbjct: 682 RFVSVRKF---HPVIDDAFLERVIKEITFATQLSAHKNVLKLFGCCLETQTPVLVYEYPV 738

Query: 137 CG--SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
            G   L D I    + + +   L    RL+I+ DIA+ IAYLH  FPR +I R+  LS  
Sbjct: 739 NGVVPLYDVIHPSTDGKSRQR-LPWKSRLRISGDIAHVIAYLHTAFPRAIIHREVTLSFF 797

Query: 195 LFNEENVAKLFDFSFSISIPEG-------------------------------------- 216
             +E+ V KL +F F+I++PEG                                      
Sbjct: 798 FLDEDCVPKLSNFFFAIALPEGRKYVVDGVMGIEGFIAPEYEMTGMVTEKVDVFSFGKLL 857

Query: 217 -ELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQA 275
            ELLTG R  D   L  +DG + L+D +K Y E+  L+  +D  I+       +E QL A
Sbjct: 858 LELLTGRRTIDFGPLG-NDGELLLQDCIKTYVEDHELDGFVDASILPRGGEIHEELQLLA 916

Query: 276 YAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
              L   C+  +   RPTMV++AK+L+++ R 
Sbjct: 917 VTKLALRCIMTAAEQRPTMVEIAKELRRIQRG 948

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061837|ref|XP_002300623.1| predicted protein [Populus trichocarpa] gi|222842349|gb|EEE79896.1| predicted protein [Populus trichocarpa]

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 165/315 (52%), Gaps = 42/315 (13%)

Query: 22  FVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVI-----MKRSFYTLYK 76
           F+ R GE +L+ELI   N + NP   FS  +L+ A ++Y     +     ++ S +  Y+
Sbjct: 23  FLDRGGE-LLEELIAFCNARSNPIRNFSLNQLQKAIDDYHPSHPLETLTDLEDSGFEWYE 81

Query: 77  GFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQI-PILVFEY 134
           G  ++RL+ +  F      +Y     +IV +SQM  H    KL GCCLE    P LVFEY
Sbjct: 82  GILEQRLVFIKSFTRCTKEVY----RDIVVSSQMSSHNNVLKLSGCCLEIPAGPALVFEY 137

Query: 135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
              G L    R+ H+       L    RLKIAK+IANA+ YLH  FPRP I RD K  NI
Sbjct: 138 PENGCLE---RLIHDGS-----LTWGTRLKIAKEIANAVTYLHTAFPRPTIHRDIKPRNI 189

Query: 195 LFNEENVAKLFDFSFSISIPEGE----------------LLTGLRAFDLARLNEDDGYVA 238
              +   AKL +FS SISIPEGE                + T + +F +  L    G + 
Sbjct: 190 FLGQNYDAKLSNFSLSISIPEGESQVEDQLAGTIFFVDPVYTDVYSFGVLLLVLLTGRIT 249

Query: 239 LR------DHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRP 292
           L+      D+VK   E+D++NE++DP I G+R  +  +Q ++A   L   C N S  DRP
Sbjct: 250 LQERIFLIDYVKDLVEQDQVNEVVDPRIRGNRGEAIDQQLVEASIELALRCTNGSGEDRP 309

Query: 293 TMVDVAKKLKQMYRS 307
            M++VAK+L+++ RS
Sbjct: 310 LMIEVAKELQRIERS 324

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542676|ref|XP_002512401.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548362|gb|EEF49853.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 140/241 (58%), Gaps = 20/241 (8%)

Query: 23  VIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQER 82
           ++RNG  +L++ I  +NG+ NP   FS +EL+ ATN+Y    VI +  ++T YKGF +ER
Sbjct: 8   LMRNGGILLEKSIAFNNGRGNPIRCFSVEELQTATNSYSQNNVIYEGGWHTHYKGFLRER 67

Query: 83  LISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYINCGSLA 141
            + V ++  +      C IN+IV+AS+M  H+   KL+GCCLE++IPILVFEY   G+L 
Sbjct: 68  PVIVKRYRTNIHERV-CPINDIVFASEMSRHKNVLKLLGCCLESEIPILVFEYAEKGNLH 126

Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
           D I        + +      RLKIA D AN IAYLH  FPRPV+ R   LSN+  +E++V
Sbjct: 127 DYIY-------KTDSASFRRRLKIAVDAANVIAYLHTAFPRPVVHRHITLSNVWLDEDSV 179

Query: 202 AKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIM 261
           AK+ DFS S+SIPEGE  T +  F +       GY A      +Y      NE ID    
Sbjct: 180 AKVTDFSLSMSIPEGE--THIEDFVMGTC----GYAA-----PEYARSGIFNEKIDVFSF 228

Query: 262 G 262
           G
Sbjct: 229 G 229

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331843|ref|NP_191332.2| putative protein kinase [Arabidopsis thaliana] gi|18086365|gb|AAL57644.1| AT3g57730/F15B8_80 [Arabidopsis thaliana] gi|21700831|gb|AAM70539.1| AT3g57730/F15B8_80 [Arabidopsis thaliana] gi|332646170|gb|AEE79691.1| putative protein kinase [Arabidopsis thaliana]

 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/355 (32%), Positives = 173/355 (48%), Gaps = 58/355 (16%)

Query: 1   MSSILRKFKLREQTQSTDKAT-------FVIRNGESVLKELIRASNGKYNPYCTFSAKEL 53
           M S+++K K   +T S  K         + + NG   LKELI   NGK  P  +F++ ++
Sbjct: 1   MESMVKKLKQNLRTGSWKKKEKSMKKERWFLENGSIFLKELIVDCNGKSIPIRSFTSSQI 60

Query: 54  EIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDC--CINNIVYASQMI 111
             AT N+D    + +  FY  YKG  ++R   + +F   K   Y       +IV +++M 
Sbjct: 61  RKATKNFDLSCFVAEEGFYIWYKGVIEDRSYMIKRFSEYKVTDYRVSEVYKDIVLSARMS 120

Query: 112 -HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            H  F KL+GCCLE   P+LVFE+   G L  R  I  N +    PL L  RLKI K+IA
Sbjct: 121 NHNNFLKLLGCCLEFPFPVLVFEFAEHGVLNYRGGITVNGEESLLPLSL--RLKIGKEIA 178

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE------------- 217
           NA+AYLH+ FP+ +I+RD K  ++  +    AKL D SFSIS+ EG+             
Sbjct: 179 NALAYLHMAFPKIIIYRDVKPLHVFLDNNWTAKLSDLSFSISLEEGKSQIEAEDVLGTYG 238

Query: 218 ---------------------------LLTGLRAFDLARLNEDDGY-VALRDHVKKYFEE 249
                                      ++TG+  +        DGY V +  ++K   E 
Sbjct: 239 YLDPLYFATRIVTEYTDVYSFGVFLMVVITGISVY----FTGSDGYPVGILGYMKGLAEN 294

Query: 250 DRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
            +LNEI+ P+IM + + S +  Q++A   L   C  E   DRP M+ VAK+LK++
Sbjct: 295 GKLNEIVYPMIMKEMT-SAQRLQVEACVLLALRCCEERVEDRPKMIQVAKELKRI 348

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
TAIR|locus:2076671	355	AT3G57730 [Arabidopsis thalian	0.682	0.594	0.388	5.9e-44
TAIR|locus:2076681	359	AT3G57720 [Arabidopsis thalian	0.669	0.576	0.391	4.1e-43
TAIR|locus:2076586	351	AT3G57710 [Arabidopsis thalian	0.640	0.564	0.373	3.2e-41
TAIR|locus:2076596	340	AT3G57700 [Arabidopsis thalian	0.682	0.620	0.404	4.6e-40
TAIR|locus:2076646	334	AT3G57750 [Arabidopsis thalian	0.631	0.583	0.368	5.1e-37
TAIR|locus:2008818	389	AT1G67470 [Arabidopsis thalian	0.608	0.483	0.377	9.2e-36
TAIR|locus:2076656	357	AT3G57740 [Arabidopsis thalian	0.682	0.591	0.358	1.9e-35
TAIR|locus:2094468	433	AT3G25490 [Arabidopsis thalian	0.692	0.494	0.331	6.3e-35
TAIR|locus:2126316	786	AT4G31100 [Arabidopsis thalian	0.663	0.260	0.366	7.3e-35
TAIR|locus:2126271	793	AT4G31110 [Arabidopsis thalian	0.663	0.258	0.361	2.1e-34

TAIR|locus:2076671 AT3G57730 [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 84/216 (38%), Positives = 121/216 (56%)

Query:     5 LRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEK 64
             LR    +++ +S  K  + + NG   LKELI   NGK  P  +F++ ++  AT N+D   
Sbjct:    12 LRTGSWKKKEKSMKKERWFLENGSIFLKELIVDCNGKSIPIRSFTSSQIRKATKNFDLSC 71

Query:    65 VIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCC--INNIVYASQMI-HRCFFKLIGC 121
              + +  FY  YKG  ++R   + +F   K   Y       +IV +++M  H  F KL+GC
Sbjct:    72 FVAEEGFYIWYKGVIEDRSYMIKRFSEYKVTDYRVSEVYKDIVLSARMSNHNNFLKLLGC 131

Query:   122 CLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
             CLE   P+LVFE+   G L  R  I  N +    PL L  RLKI K+IANA+AYLH+ FP
Sbjct:   132 CLEFPFPVLVFEFAEHGVLNYRGGITVNGEESLLPLSL--RLKIGKEIANALAYLHMAFP 189

Query:   182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
             + +I+RD K  ++  +    AKL D SFSIS+ EG+
Sbjct:   190 KIIIYRDVKPLHVFLDNNWTAKLSDLSFSISLEEGK 225

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076681 AT3G57720 [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
 Identities = 83/212 (39%), Positives = 116/212 (54%)

Query:     9 KLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMK 68
             K +E+ +   +  + + NG   LKELI   NGK  P   FS+ ++  AT+N+ S   +  
Sbjct:    19 KRKEKEKDIQEEKWFLDNGSIFLKELIADCNGKSIPIRNFSSDQILKATSNFGSSCFVTA 78

Query:    69 RSFYTLYKGFCQERLISVMKFDASKPRMYDCC--INNIVYASQMI-HRCFFKLIGCCLET 125
               FY  YKG  ++R   + +F   K   Y      N IV +++M  H  F KLIG CLE 
Sbjct:    79 EGFYVWYKGIIEDRSYMIKRFSEYKVTQYRVAEVYNEIVLSARMSNHNNFLKLIGFCLEF 138

Query:   126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVI 185
              +P+LVFEY   G L  R  +  N +    PL L  RLKI K+IANA+ YLH+ FP+ +I
Sbjct:   139 SLPVLVFEYAEHGVLNHRGGVIVNGEEVILPLSL--RLKIGKEIANAVTYLHMAFPKILI 196

Query:   186 FRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              R  K  N+  +E    KL DFS SI++PEG+
Sbjct:   197 HRHIKPRNVFLDENWTPKLSDFSISINLPEGK 228

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076586 AT3G57710 [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
 Identities = 77/206 (37%), Positives = 117/206 (56%)

Query:    18 DKAT-FVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYK 76
             DKA  + + NG   L+EL+   NGK  P  +FS +++  ATNN+DS   + +  +Y  Y+
Sbjct:    17 DKAKRWFLDNGSIFLRELVADCNGKSIPIRSFSPEQILKATNNFDSSCFVSQDVYYKWYR 76

Query:    77 GFCQERLISVMKFD----ASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILV 131
             G  ++R   + +F       K        N+IV +++M  H  F +L+GCCLE   P+LV
Sbjct:    77 GEIEDRSYMIKRFSEDEITGKRHRVKEVYNDIVLSARMSNHSNFLQLLGCCLEFPFPVLV 136

Query:   132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKL 191
             FE+   G++  R  +  N +    P  +  RLKI K+IANA+ YLH  FP+ +I RD K 
Sbjct:   137 FEFAEHGAMNQRGGVIVNGEESLLPWSV--RLKIGKEIANAVTYLHTAFPKIIIHRDVKP 194

Query:   192 SNILFNEENVAKLFDFSFSISIPEGE 217
              ++  ++   AKL D SFSIS+PEG+
Sbjct:   195 MHVFLDKNWTAKLSDLSFSISLPEGK 220

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076596 AT3G57700 [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
 Identities = 89/220 (40%), Positives = 126/220 (57%)

Query:     4 ILRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSE 63
             +LR F+ +++ Q  ++   + +NG  +L+ELI  S G YNP  TFS+ ++  ATN++D  
Sbjct:     1 MLRLFR-KKKKQKKEEEINLQKNGSLLLEELIATSGGIYNPIRTFSSDQILQATNHFDWN 59

Query:    64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCC 122
              VI +  F   YKG  + R + + KF        D    +I  +S M  H+   KL+GCC
Sbjct:    60 YVISEDRF-VWYKGMIENRPVLIKKFQDCSVFDADNFYRDIAVSSLMSSHKNVLKLLGCC 118

Query:   123 LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
             LE   P+LV EY   G+L + IR          P  +  RL+IAK+IA+A+AYLH  FPR
Sbjct:   119 LEFPRPVLVCEYPEHGAL-NCIRCGKEGVRSF-PWNV--RLRIAKEIADAVAYLHTEFPR 174

Query:   183 PVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGL 222
              +I RD KL+NI  +E   AKL  FS SI +PEGE  TG+
Sbjct:   175 TIIHRDLKLANIFLDENWSAKLSSFSLSIVLPEGE--TGV 212

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2076646 AT3G57750 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
 Identities = 74/201 (36%), Positives = 112/201 (55%)

Query:    19 KATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGF 78
             K  + ++NG  +L+ELI + +GK NP   FS+ ++  AT+N+   ++I    ++  YKG 
Sbjct:     8 KRRWDLKNGGILLEELIASFDGKTNPIRCFSSDQILKATDNFSESRIISSWGYFIWYKGV 67

Query:    79 CQERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYINC 137
              +ER +S+ K+ +     +     +I  +SQM  H+   KLIGCCLE  +P LV EY   
Sbjct:    68 IEERQVSIKKWSSQNLSSFTEAYRDISVSSQMSGHKNALKLIGCCLEFDLPALVCEYTEH 127

Query:   138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN 197
             G L      +         L    RLKIAK+IA+++ YLH  FP  ++ R+   +NI  +
Sbjct:   128 GPLN-----RDGGLSSGVVLPWKVRLKIAKEIASSVTYLHTAFPETIVHRNINPTNIFID 182

Query:   198 EENVAKLFDFSFSISIPEGEL 218
             E   AKL DF F ++IPEGEL
Sbjct:   183 ENWTAKLSDFWFCVAIPEGEL 203

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2008818 AT1G67470 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
 Identities = 77/204 (37%), Positives = 110/204 (53%)

Query:    19 KATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSF---YTLY 75
             K+      G  +LK+LI   +GK NP   FSA E+  ATNN+    ++ + S    Y  Y
Sbjct:    11 KSEIASERGAKLLKDLIECCDGKSNPIKFFSADEIRKATNNFGVSNLVSELSHDFDYKWY 70

Query:    76 KGFCQER-LISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFE 133
              G  +   +I V K  +      D    +I  +S +  H+ F KLIG CLE + P++V+ 
Sbjct:    71 SGKNENHDMILVRKAFSQSVYYKDTFFRDIAVSSMVSGHKNFLKLIGYCLEFEEPVMVYH 130

Query:   134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN 193
              +          ++ + QP         R+KIA+DIA A+AYLH  FPRP ++R   L+N
Sbjct:   131 GVK-----KHYHLESSEQPWKR------RMKIAEDIATALAYLHTAFPRPFVYRCLSLTN 179

Query:   194 ILFNEENVAKLFDFSFSISIPEGE 217
             IL +E+ VAKL DFSF +SIPEGE
Sbjct:   180 ILLDEDGVAKLMDFSFCVSIPEGE 203

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076656 AT3G57740 [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
 Identities = 81/226 (35%), Positives = 124/226 (54%)

Query:     3 SILRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDS 62
             S  RK   ++ +++  +  +   NG+ +L++LI   NGK NP  TFSA+E+  AT+N+  
Sbjct:     2 SCWRKKSKKKNSEANQRQRWFQENGKVLLEDLIELCNGKSNPIKTFSAEEILQATDNFSE 61

Query:    63 EKVIMKRSFYTLYKGFCQER--LISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLI 119
               ++++ +F  +Y+G  Q R  LI    ++  K    +    +I  +S +  H+ F KL+
Sbjct:    62 SNLVIRFNF--MYRGILQNRPVLIKRATWNYYKSDTLEKICRDIAVSSMVSGHKNFLKLL 119

Query:   120 GCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTH-RLKIAKDIANAIAYLHV 178
             GCCLE + P+LV EY      A+RI   + P P  E LL    R+KIAK+IA A++YLH 
Sbjct:   120 GCCLEFEHPVLVCEY------AERIPF-NTPNP--EMLLPWRMRIKIAKEIAIAVSYLHT 170

Query:   179 GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRA 224
                R +I  D +  NI  +    AKL DF   I+IPEGE    + A
Sbjct:   171 ALSRTMIHTDIQPFNIFVDSNGTAKLSDFCLCIAIPEGETFVKVHA 216

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2094468 AT3G25490 [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
 Identities = 73/220 (33%), Positives = 118/220 (53%)

Query:     3 SILRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDS 62
             S ++  +  ++     +  F  +NG  +L E +  +      +  F+ ++++ ATN YD 
Sbjct:    51 SYIKNIRKHQKDTKIQRQLFFEKNGGGMLIERLSGAGSSNIDFKIFTEEDMKEATNGYDV 110

Query:    63 EKVIMKRSFYTLYKGFCQER-LISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGC 121
              +++ +   +T+YKG   +  ++++ K         +  IN ++  SQ+ HR   KL+GC
Sbjct:   111 SRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGC 170

Query:   122 CLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
             CLET++P+LV+E+I  GSL D +   H        L   HRL+IA ++A AIAYLH G  
Sbjct:   171 CLETEVPLLVYEFITGGSLFDHL---HGSMFVSS-LTWEHRLEIAIEVAGAIAYLHSGAS 226

Query:   182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIP-EGELLT 220
              P+I RD K  NIL +E   AK+ DF  S   P + E LT
Sbjct:   227 IPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLT 266

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2126316 AT4G31100 [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
 Identities = 77/210 (36%), Positives = 114/210 (54%)

Query:     5 LRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEK 64
             LRKF ++ +  +  K  F  RNG  +L++ +    G       F++KELE AT N+   +
Sbjct:   390 LRKFLVKRR-MAKRKKKFFKRNGGLLLQQELNTRQGVVEKARIFTSKELEKATENFSENR 448

Query:    65 VIMKRSFYTLYKGFCQE-RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL 123
             V+      T+YKG   + R ++V K            IN +V  SQ+ HR   KL+GCCL
Sbjct:   449 VLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCL 508

Query:   124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
             ET++PILV+E+I  G+L   I   H  +     ++   RL+IA DIA A++YLH     P
Sbjct:   509 ETEVPILVYEFIINGNLFKHI---HEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSP 565

Query:   184 VIFRDFKLSNILFNEENVAKLFDFSFSISI 213
             +  RD K +NIL +E+  AK+ DF  S S+
Sbjct:   566 IYHRDIKSTNILLDEKYRAKVADFGTSRSV 595

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2126271 AT4G31110 [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
 Identities = 76/210 (36%), Positives = 112/210 (53%)

Query:     5 LRKFKLREQTQSTDKATFVIRNGESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEK 64
             LRKF ++ +     K  F  RNG  +L + +    G       F+++ELE AT N+   +
Sbjct:   399 LRKFLIKRRITKRKKKFFK-RNGGLLLLQELNTREGYVEKTRVFNSRELEKATENFSENR 457

Query:    65 VIMKRSFYTLYKGFCQE-RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL 123
             V+      T+YKG   + R ++V K            IN +V  SQ+ HR   KL+GCCL
Sbjct:   458 VLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCL 517

Query:   124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
             ET++P+LV+E+I  G+L   I   H  +     +L   RL+IA DIA A++YLH     P
Sbjct:   518 ETEVPMLVYEFIINGNLFKHI---HEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSP 574

Query:   184 VIFRDFKLSNILFNEENVAKLFDFSFSISI 213
             +  RD K +NIL +E+  AK+ DF  S S+
Sbjct:   575 IYHRDIKSTNILLDEKYRAKVADFGTSRSV 604

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	309
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-16
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-14
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-12
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-12
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	8e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	4e-08
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	8e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	8e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-07
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-06
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-06
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	8e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-05
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	5e-05
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	5e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	5e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	7e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	8e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	5e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	5e-04
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	7e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	7e-04
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	9e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	0.001
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.001
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.001
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.001
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.001
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	0.001
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.001
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.002
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.002
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.002
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.002
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	0.002
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	0.002
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.002
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.002
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 74.2 bits (183), Expect = 9e-16
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 13/155 (8%)

Query: 70  SFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQ 126
            F T+Y    ++  + +++              +   +   + + H    KL G   +  
Sbjct: 5   GFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN 64

Query: 127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
              LV EY   GSL D ++       + E       L+I   I   + YLH      +I 
Sbjct: 65  HLYLVMEYCEGGSLKDLLKENEGKLSEDE------ILRILLQILEGLEYLHS---NGIIH 115

Query: 187 RDFKLSNILFNEEN-VAKLFDFSFSISIPEGELLT 220
           RD K  NIL + +N   KL DF  S  +   + L 
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLL 150

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 72.6 bits (179), Expect = 7e-15
 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 5/103 (4%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEP--LLLTHRLKIAKDIANAIA 174
           +L+G C E +   LV EY+  G L D +R      P  E   L L   L  A  IA  + 
Sbjct: 60  RLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119

Query: 175 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           YL     +  + RD    N L  E+ V K+ DF  S  + + +
Sbjct: 120 YLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 70.3 bits (173), Expect = 5e-14
 Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 32/159 (20%)

Query: 64  KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL 123
           KVI K+      +   +E  I ++K              NIV           +L     
Sbjct: 30  KVIKKKKIKKDRERILRE--IKILK---------KLKHPNIV-----------RLYDVFE 67

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
           +     LV EY   G L D ++       +   L         + I +A+ YLH    + 
Sbjct: 68  DEDKLYLVMEYCEGGDLFDLLK-------KRGRLSEDEARFYLRQILSALEYLH---SKG 117

Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGL 222
           ++ RD K  NIL +E+   KL DF  +  +  GE LT  
Sbjct: 118 IVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTF 156

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 68.0 bits (167), Expect = 3e-13
 Identities = 51/231 (22%), Positives = 80/231 (34%), Gaps = 73/231 (31%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H    KL+G C E +  ++V EY+  G L D +R     + + + L L+  L  A  IA 
Sbjct: 60  HPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLR-----KNRPKELSLSDLLSFALQIAR 114

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLN 231
            + YL     +  I RD    N L  E  V K+ DF                   L+R  
Sbjct: 115 GMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFG------------------LSRDL 153

Query: 232 EDDGYV---------------ALRDHV---------------------KKYFEEDRLNEI 255
            DD Y                +L++                       ++ +      E+
Sbjct: 154 YDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEV 213

Query: 256 IDPLIMGDR-----SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKL 301
           ++ L  G R     +C            L+ +C  E P DRPT  ++ + L
Sbjct: 214 LEYLKKGYRLPKPPNCP------PELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 66.0 bits (162), Expect = 1e-12
 Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 9/106 (8%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H    KL+G C E +   +V EY+  G L   +R           L L+  L  A  IA 
Sbjct: 60  HPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRK------NRPKLSLSDLLSFALQIAR 113

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            + YL     +  I RD    N L  E  V K+ DF  S  + + +
Sbjct: 114 GMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 156

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 65.6 bits (161), Expect = 2e-12
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL 176
           +L+G C + +   +V EY+  G L D +R +H      E L L   L++A  IA  + YL
Sbjct: 65  RLLGVCTQGEPLYIVTEYMPGGDLLDFLR-KHG-----EKLTLKDLLQMALQIAKGMEYL 118

Query: 177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
                +  + RD    N L  E  V K+ DF  S  I E +
Sbjct: 119 E---SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDD 156

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 64.6 bits (158), Expect = 5e-12
 Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H    +LI    +     LV EY   G L D +        +  PL      KIA  I  
Sbjct: 57  HPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLS-------RGGPLSEDEAKKIALQILR 109

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            + YLH      +I RD K  NIL +E  V K+ DF  +
Sbjct: 110 GLEYLHS---NGIIHRDLKPENILLDENGVVKIADFGLA 145

Length = 260

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 58.4 bits (141), Expect = 8e-10
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 13/109 (11%)

Query: 112 HRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
           H    K  GCC E   +   L+ EY+  GSL D +       P+H+ L L   L  A+ I
Sbjct: 65  HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL-------PKHK-LNLAQLLLFAQQI 116

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL 218
              +AYLH    +  I RD    N+L + + + K+ DF  + ++PEG  
Sbjct: 117 CEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 52.9 bits (128), Expect = 4e-08
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 23/123 (18%)

Query: 103 NIVYASQMIHRCFFKLIGCCL-ETQIPILVF-EYINCGSLADRIRIQHNPQPQHEPLLLT 160
           NIV       R +    G    E +  + +F EY++ GSL+  ++         EP++  
Sbjct: 60  NIV-------RYY----GSERDEEKNTLNIFLEYVSGGSLSSLLK---KFGKLPEPVI-- 103

Query: 161 HRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
            R K  + I   +AYLH      ++ RD K +NIL + + V KL DF  +  + + E   
Sbjct: 104 -R-KYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158

Query: 221 GLR 223
           G  
Sbjct: 159 GTG 161

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQ--------PQHEPLLL 159
           +   H    K  G C E   PI+VFEY+  G L   +R  H P              L L
Sbjct: 63  TNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLR-SHGPDAAFLKSPDSPMGELTL 121

Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           +  L+IA  IA+ + YL     +  + RD    N L   + V K+ DF  S
Sbjct: 122 SQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDFGMS 169

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 53.2 bits (126), Expect = 6e-08
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 11/161 (6%)

Query: 59  NYDSEKVIMKRSFYTLYKGFCQERL-ISVMKFDASKPRMYDCCINNIVYASQMI--HRCF 115
           +Y   + + + SF  +Y    ++ + + V+                 +     +      
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
            KL     +     LV EY++ GSL D ++       +  PL  +  L I   I +A+ Y
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLK----KIGRKGPLSESEALFILAQILSALEY 116

Query: 176 LHVGFPRPVIFRDFKLSNILFNEE-NVAKLFDFSFSISIPE 215
           LH    + +I RD K  NIL + +  V KL DF  +  +P+
Sbjct: 117 LH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154

Length = 384

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 52.4 bits (126), Expect = 7e-08
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 112 HRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
           H    K  G C +   +   L+ EY+  GSL D ++ +H  Q   + LLL      +  I
Sbjct: 65  HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQ-RHRDQINLKRLLL-----FSSQI 118

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
              + YL     +  I RD    NIL   E++ K+ DF  +  +PE 
Sbjct: 119 CKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 9/78 (11%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +V EY++ GSLAD ++      P  EP+L      IA+ I   + YLH    R +I RD 
Sbjct: 76  IVLEYMDGGSLADLLKK-VGKIP--EPVLA----YIARQILKGLDYLHT--KRHIIHRDI 126

Query: 190 KLSNILFNEENVAKLFDF 207
           K SN+L N +   K+ DF
Sbjct: 127 KPSNLLINSKGEVKIADF 144

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 52.0 bits (125), Expect = 8e-08
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H    +L G  L   + ++V E    GSL DR+R     +      L++     A  IAN
Sbjct: 55  HENLIRLYGVVLTHPL-MMVTELAPLGSLLDRLR-----KDALGHFLISTLCDYAVQIAN 108

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            + YL     +  I RD    NIL   ++  K+ DF    ++P+ E
Sbjct: 109 GMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE 151

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 15/158 (9%)

Query: 60  YDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
           ++  + I K  F  +YK       +E  I V+K         +  IN I    +  H   
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKL--ESKEKKEKIINEIQILKKCKHPNI 59

Query: 116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
            K  G  L+     +V E+ + GSL D ++     Q   E  +      + K++   + Y
Sbjct: 60  VKYYGSYLKKDELWIVMEFCSGGSLKDLLK--STNQTLTESQIAY----VCKELLKGLEY 113

Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
           LH      +I RD K +NIL   +   KL DF  S  +
Sbjct: 114 LH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           + + H    +L+G  L+     +V EY+  GSL D +R +         + L  +L  A 
Sbjct: 55  TTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSR-----GRAVITLAQQLGFAL 109

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
           D+   + YL     +  + RD    N+L +E+ VAK+ DF
Sbjct: 110 DVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDF 146

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 20/113 (17%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHE----------------PLLLT 160
           KL+G C   +   L+FEY+  G L + +R   +P+ Q                  PL  T
Sbjct: 72  KLLGVCAVGKPMCLLFEYMAYGDLNEFLR-HRSPRAQCSLSHSTSSARKCGLNPLPLSCT 130

Query: 161 HRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
            +L IAK +A  +AYL     R  + RD    N L  E  V K+ DF  S +I
Sbjct: 131 EQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 180

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 49.1 bits (118), Expect = 8e-07
 Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 28/139 (20%)

Query: 80  QERLISVMKFDASKPR--------MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV 131
           +E  I  M+               M DC   NIV                 L      +V
Sbjct: 45  KEVAIKKMRLRKQNKELIINEILIMKDCKHPNIV-----------DYYDSYLVGDELWVV 93

Query: 132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKL 191
            EY++ GSL D I    N    +EP +      + +++   + YLH    + VI RD K 
Sbjct: 94  MEYMDGGSLTDIIT--QNFVRMNEPQIAY----VCREVLQGLEYLH---SQNVIHRDIKS 144

Query: 192 SNILFNEENVAKLFDFSFS 210
            NIL +++   KL DF F+
Sbjct: 145 DNILLSKDGSVKLADFGFA 163

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 55/272 (20%), Positives = 101/272 (37%), Gaps = 29/272 (10%)

Query: 57  TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMK---FDASKPRMYDCCINNIVYASQMI 111
             N+  EK I K  F  +YK  C    R++++ K   F+    +    C+  I    Q+ 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H    K +   +E     +V E  + G L+  I+   + + Q   +      K    + +
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMIK---HFKKQKRLIPERTIWKYFVQLCS 117

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS----FSISIPEGELLTGLRAFDL 227
           A+ ++H    + ++ RD K +N+      V KL D      FS        L G   +  
Sbjct: 118 ALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMS 174

Query: 228 ARLNEDDGYVALRD------------HVKKYFEEDRLN--EIIDPLIMGDRSCSGKEQQL 273
                ++GY    D             ++  F  D++N   +   +   D      +   
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYS 234

Query: 274 QAYAHLIFECVNESPVDRPTMVDVAKKLKQMY 305
           +    L+  C+N  P  RP +  V +  K+M+
Sbjct: 235 EELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 14/88 (15%)

Query: 130 LVFEYINCGSLAD-RIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
           LVFEY +     D +  +   P P    L+ +    I   +   +AY H      ++ RD
Sbjct: 75  LVFEYCDM----DLKKYLDKRPGPLSPNLIKS----IMYQLLRGLAYCHS---HRILHRD 123

Query: 189 FKLSNILFNEENVAKLFDFSFS--ISIP 214
            K  NIL N + V KL DF  +    IP
Sbjct: 124 LKPQNILINRDGVLKLADFGLARAFGIP 151

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 16/101 (15%)

Query: 124 ETQIPILVFEYINCGSLADRI--RIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
            + I I + EY   GSL D I  +++       E +L     KIA+ +   ++YLH    
Sbjct: 73  SSSIGIAM-EYCEGGSL-DSIYKKVKKRGGRIGEKVLG----KIAESVLKGLSYLH---S 123

Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGL 222
           R +I RD K SNIL   +   KL DF  S     GEL+  L
Sbjct: 124 RKIIHRDIKPSNILLTRKGQVKLCDFGVS-----GELVNSL 159

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 42/128 (32%), Positives = 55/128 (42%), Gaps = 28/128 (21%)

Query: 112 HRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +L   C E + PI +V EY++ GSL D ++       + + L L   + +A  IA
Sbjct: 60  HDKLVQLYAVCSEEE-PIYIVTEYMSKGSLLDFLK-----SGEGKKLRLPQLVDMAAQIA 113

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARL 230
             +AYL     R  I RD    NIL  E  V K+ DF                   LARL
Sbjct: 114 EGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFG------------------LARL 152

Query: 231 NEDDGYVA 238
            EDD Y A
Sbjct: 153 IEDDEYTA 160

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LV  Y++ GSL D ++  +      E ++ T    + K++   + YLH       I RD 
Sbjct: 76  LVMPYLSGGSLLDIMKSSYPRGGLDEAIIAT----VLKEVLKGLEYLH---SNGQIHRDI 128

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEG 216
           K  NIL  E+   K+ DF  S S+ +G
Sbjct: 129 KAGNILLGEDGSVKIADFGVSASLADG 155

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 10/87 (11%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LVFEY+   +L + +       P         +L        AIAY H      +I RD 
Sbjct: 77  LVFEYVER-TLLELLEASPGGLPPDAVRSYIWQL------LQAIAYCH---SHNIIHRDI 126

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEG 216
           K  NIL +E  V KL DF F+ ++   
Sbjct: 127 KPENILVSESGVLKLCDFGFARALRAR 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 46.4 bits (111), Expect = 5e-06
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 14/83 (16%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK-IAKDIANAIAYLH-VGFPRPVIFR 187
           LV EY   G L   +          E      R +  A +I  A+ YLH +G    +I+R
Sbjct: 70  LVLEYAPGGELFSHL--------SKEGRFSEERARFYAAEIVLALEYLHSLG----IIYR 117

Query: 188 DFKLSNILFNEENVAKLFDFSFS 210
           D K  NIL + +   KL DF  +
Sbjct: 118 DLKPENILLDADGHIKLTDFGLA 140

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 9/102 (8%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
           Q  H    KLIG C++ Q   +V E +  GSL   +R + N       L +   L+++ D
Sbjct: 48  QYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN------RLTVKKLLQMSLD 101

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A  + YL     +  I RD    N L  E NV K+ DF  S
Sbjct: 102 AAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMS 140

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANA 172
            F K      + Q+  LV E    GS+ D ++ ++   +   E  +      I ++    
Sbjct: 71  AFIKKNPPGNDDQL-WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAY----ILRETLRG 125

Query: 173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           +AYLH      VI RD K  NIL  +    KL DF  S
Sbjct: 126 LAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 11/115 (9%)

Query: 101 INNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLT 160
           I  + +  Q+ H    +  GC L+     LV EY   GS +D + +   P  + E   +T
Sbjct: 69  IKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAIT 127

Query: 161 HRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 214
           H           +AYLH      +I RD K  NIL  E    KL DF S S S P
Sbjct: 128 H------GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP 173

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 15/112 (13%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ---------HEPLLLTHR 162
           H+   +  G C E +  ++VFEY+  G L +R    H P  +            L L   
Sbjct: 66  HQHIVRFYGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKILAGGEDVAPGQLTLGQM 124

Query: 163 LKIAKDIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
           L IA  IA+ + YL  + F    + RD    N L  +  V K+ DF  S  I
Sbjct: 125 LAIASQIASGMVYLASLHF----VHRDLATRNCLVGQGLVVKIGDFGMSRDI 172

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 10/162 (6%)

Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKG--FCQERLISVMKFDASKPRMYDCCINNIVYASQ 109
           E E   +      V+ K ++  +Y       +  I++ +      R        I   S 
Sbjct: 2   EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61

Query: 110 MIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
           + HR   + +G   E     +  E +  GSL+  +R +  P   +E  ++ +     K I
Sbjct: 62  LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFY----TKQI 117

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLFDFSFS 210
              + YLH      ++ RD K  N+L N    V K+ DF  S
Sbjct: 118 LEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTS 156

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
           +Q+ H    +L+G  +E +  + +V EY+  GSL D +R +       + LL     K +
Sbjct: 54  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 108

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            D+  A+ YL        + RD    N+L +E+NVAK+ DF  +
Sbjct: 109 LDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 149

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
              I I + EY++ GSL   ++      P  E +L     KIA  +   + YLH      
Sbjct: 71  NGDISICM-EYMDGGSLDKILKEVQGRIP--ERILG----KIAVAVLKGLTYLHE--KHK 121

Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
           +I RD K SNIL N     KL DF  S
Sbjct: 122 IIHRDVKPSNILVNSRGQIKLCDFGVS 148

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 26/153 (16%)

Query: 65  VIMKRSFYTLYKGFCQE-------RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFK 117
           +I + +F  +YKG   E       + IS+ K            +  I     + H    K
Sbjct: 7   LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEA---LKSIMQEIDLLKNLKHPNIVK 63

Query: 118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN---AIA 174
            IG    +    ++ EY   GSL   I+ +  P P+           +A  +      +A
Sbjct: 64  YIGSIETSDSLYIILEYAENGSLRQIIK-KFGPFPESL---------VAVYVYQVLQGLA 113

Query: 175 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
           YLH    + VI RD K +NIL  ++ V KL DF
Sbjct: 114 YLH---EQGVIHRDIKAANILTTKDGVVKLADF 143

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 17/87 (19%)

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
           E Q+   + E+++ GSL     I                  +A+ I + IAYLH    R 
Sbjct: 146 EIQV---LLEFMDGGSLEGT-HIADEQFLAD----------VARQILSGIAYLH---RRH 188

Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
           ++ RD K SN+L N     K+ DF  S
Sbjct: 189 IVHRDIKPSNLLINSAKNVKIADFGVS 215

Length = 353

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 27/135 (20%)

Query: 103 NIVYASQMIHRCF---FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLL 159
             V   Q++ R      K++          L+ E+I  G   D +  +            
Sbjct: 40  REVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE-GETLDEVSEEEKED-------- 90

Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIF-RDFKLSNILFNEENVAKLFDFSFSISIPEGEL 218
                IA+ +A  +A LH   P  V+   D    NIL ++  +  + D+ ++        
Sbjct: 91  -----IAEQLAELLAKLH-QLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY------ 138

Query: 219 LTGLRAFDLARLNED 233
             G  AFDLA     
Sbjct: 139 --GPPAFDLAAALLF 151

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 43.4 bits (102), Expect = 5e-05
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)

Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L G C E + PI LVFE++  G L+D +R Q     Q E L     L +  
Sbjct: 55  KLSHPKLVQLYGVCTE-RSPICLVFEFMEHGCLSDYLRAQRGKFSQ-ETL-----LGMCL 107

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           D+   +AYL       VI RD    N L  E  V K+ DF  +
Sbjct: 108 DVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMT 147

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L G C + Q PI +V EY+  G L + +R +   +   E LL      +  
Sbjct: 55  KLSHPNLVQLYGVCTK-QRPIFIVTEYMANGCLLNYLR-ERKGKLGTEWLL-----DMCS 107

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           D+  A+ YL        I RD    N L  E+NV K+ DF  +
Sbjct: 108 DVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLA 147

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 42.9 bits (101), Expect = 7e-05
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 13/101 (12%)

Query: 112 HRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDI 169
           H    +L G C   Q PI +V EY++ G L + +R      QP          L++ KD+
Sbjct: 58  HEKLVQLYGVC-TKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQ-------LLEMCKDV 109

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
              +AYL     +  I RD    N L +++   K+ DF  S
Sbjct: 110 CEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLS 147

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 43.4 bits (102), Expect = 8e-05
 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 12/108 (11%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQH---------EPLLLTHR 162
           H+    L+G C +     ++ EY   G+L + +R +  P P +         E L     
Sbjct: 77  HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDL 136

Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           +  A  +A  + YL     R  I RD    N+L  E+NV K+ DF  +
Sbjct: 137 VSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLA 181

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 13/111 (11%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           +Q+ H C  +LIG C    + +LV E    G L   ++ +    P  +   L H+     
Sbjct: 51  AQLDHPCIVRLIGVCKGEPL-MLVMELAPLGPLLKYLK-KRREIPVSDLKELAHQ----- 103

Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            +A  +AYL    F    + RD    N+L    + AK+ DF  S ++  G 
Sbjct: 104 -VAMGMAYLESKHF----VHRDLAARNVLLVNRHQAKISDFGMSRALGAGS 149

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 31/131 (23%)

Query: 81  ERLISVMKFDASKPRMYDCCINNIV-YASQMIHRCFFKLIGCCLETQIPILVFEYINCGS 139
            + IS++K          C    IV Y     +  +FK       T + I V EY   GS
Sbjct: 46  IKEISILK---------QCDSPYIVKY-----YGSYFK------NTDLWI-VMEYCGAGS 84

Query: 140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE 199
           ++D ++I +    + E         I       + YLH       I RD K  NIL NEE
Sbjct: 85  VSDIMKITNKTLTEEEIAA------ILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEE 135

Query: 200 NVAKLFDFSFS 210
             AKL DF  S
Sbjct: 136 GQAKLADFGVS 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 11/115 (9%)

Query: 101 INNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLT 160
           I  + +  ++ H    +  GC L      LV EY   GS +D + +   P  + E   +T
Sbjct: 63  IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVT 121

Query: 161 HRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 214
           H           +AYLH      +I RD K  NIL +E  + KL DF S SI  P
Sbjct: 122 H------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 36/116 (31%), Positives = 47/116 (40%), Gaps = 13/116 (11%)

Query: 101 INNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC-GSLADRIRIQHNPQPQHEPLLL 159
           I  + +  Q+ H    +  GC L      LV EY  C GS +D + +   P  + E   +
Sbjct: 63  IKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEY--CLGSASDILEVHKKPLQEVEIAAI 120

Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 214
            H           +AYLH       I RD K  NIL  E    KL DF S S+  P
Sbjct: 121 CH------GALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 9/102 (8%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
           Q  H    KLIG C + Q   +V E +  G     +R       + + L     +K A D
Sbjct: 48  QYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLR------KKKDELKTKQLVKFALD 101

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A  +AYL     +  I RD    N L  E NV K+ DF  S
Sbjct: 102 AAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMS 140

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           S+  H+   +LIG   E     ++ E +  G L   +R       +   L +   L  A+
Sbjct: 64  SKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123

Query: 168 DIANAIAYLHV-GFPRPVIFRDFKLSNILFN---EENVAKLFDFSFSISI 213
           D+A    YL    F    I RD    N L        VAK+ DF  +  I
Sbjct: 124 DVAKGCKYLEENHF----IHRDIAARNCLLTCKGPGRVAKIADFGMARDI 169

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 28/137 (20%)

Query: 85  SVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRI 144
           SVMK        ++C  +++V           +L+G     Q  ++V E +  G L   +
Sbjct: 61  SVMK-------EFNC--HHVV-----------RLLGVVSTGQPTLVVMELMAKGDLKSYL 100

Query: 145 RIQHNPQPQHEPLL----LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN 200
           R    P+ ++ P L    L   +++A +IA+ +AYL     +  + RD    N +  E+ 
Sbjct: 101 R-SRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDL 156

Query: 201 VAKLFDFSFSISIPEGE 217
             K+ DF  +  I E +
Sbjct: 157 TVKIGDFGMTRDIYETD 173

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 17/151 (11%)

Query: 64  KVIMKRSFYTLYKGFC-QERLISV--MKFDASK----PRMYDCCINNIVYASQMIHRCFF 116
           +V+ K ++ T+Y G   Q +LI+V  ++ D S      + Y+     +     + H    
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL 176
           + +G CL+     +  E++  GS++  +  +  P P  EP+      K  K I + +AYL
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSISSILN-RFGPLP--EPVFC----KYTKQILDGVAYL 118

Query: 177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
           H      V+ RD K +N++     + KL DF
Sbjct: 119 H---NNCVVHRDIKGNNVMLMPNGIIKLIDF 146

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 42/222 (18%), Positives = 78/222 (35%), Gaps = 30/222 (13%)

Query: 90  DASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN 149
             S+    D  +N IV  S + H          ++    ++  EY N G+L D+I     
Sbjct: 37  RLSEKERRDA-LNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIV---- 91

Query: 150 PQPQHEPLLLTHRLKIA--KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
              + +  L    + +     I +A++Y+H      ++ RD K  NI   +  + KL DF
Sbjct: 92  ---RQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDF 145

Query: 208 SFS----ISIPEGELLTGLRAFDLARLNEDDGYVALRD------------HVKKYFEEDR 251
             S          E + G   +    L +   Y    D             +K+ F+   
Sbjct: 146 GISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN 205

Query: 252 LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPT 293
              ++  ++ G+ +             L+   + + P  RPT
Sbjct: 206 PLNLVVKIVQGNYT-PVVSVYSSELISLVHSLLQQDPEKRPT 246

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 11/115 (9%)

Query: 101 INNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLT 160
           I  + +  ++ H    +  GC L      LV EY   GS +D + +   P  + E   +T
Sbjct: 73  IKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAIT 131

Query: 161 HRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 214
           H           +AYLH      +I RD K  NIL  E    KL DF S SI+ P
Sbjct: 132 H------GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP 177

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 13/111 (11%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNP--------QPQHEPLLL 159
           + + H    K  G C+E    I+VFEY+  G L   +R  H P            E L  
Sbjct: 62  TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR-AHGPDAVLMAEGNRPAE-LTQ 119

Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           +  L IA+ IA  + YL     +  + RD    N L  E  + K+ DF  S
Sbjct: 120 SQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMS 167

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 22/144 (15%)

Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMI-----HRCFFKLIGCCLETQIPILVFEYINCG 138
           + ++K DA++  + D     ++   +M+     H+    L+G C +     ++ EY + G
Sbjct: 55  VKMLKSDATEKDLSD-----LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 109

Query: 139 SLADRIRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +L + +R +  P       P   P   L     +  A  +A  + YL     +  I RD 
Sbjct: 110 NLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDL 166

Query: 190 KLSNILFNEENVAKLFDFSFSISI 213
              N+L  E+NV K+ DF  +  I
Sbjct: 167 AARNVLVTEDNVMKIADFGLARDI 190

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 13/89 (14%)

Query: 121 CCLETQIPI-LVFEYINCGSLADRIRIQHN-PQPQHEPLLLTHRLKIAKDIANAIAYLHV 178
            C +T+  +  V EY+N G L   I+      +P             A +I   + +LH 
Sbjct: 63  SCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEP--------RARFYAAEIVLGLQFLH- 113

Query: 179 GFPRPVIFRDFKLSNILFNEENVAKLFDF 207
              R +I+RD KL N+L + E   K+ DF
Sbjct: 114 --ERGIIYRDLKLDNVLLDSEGHIKIADF 140

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 21/147 (14%)

Query: 82  RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
           R ++V K D  K +  +   N +V      H    ++    L      +V E++  G+L 
Sbjct: 45  RQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT 104

Query: 142 DRI---RIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE 198
           D +   R+       +E  + T    +   +  A+++LH    + VI RD K  +IL   
Sbjct: 105 DIVTHTRM-------NEEQIAT----VCLAVLKALSFLHA---QGVIHRDIKSDSILLTS 150

Query: 199 ENVAKLFDFSF----SISIPEGELLTG 221
           +   KL DF F    S  +P  + L G
Sbjct: 151 DGRVKLSDFGFCAQVSKEVPRRKSLVG 177

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 41.3 bits (98), Expect = 3e-04
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)

Query: 131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFK 190
           V EY + G L+ +I+ Q   + + +P      L     +  A+ YLH    R ++ RD K
Sbjct: 77  VMEYADGGDLSQKIKKQ---KKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIK 130

Query: 191 LSNILFNEENVAKLFDFSFS 210
             NI      + KL DF  S
Sbjct: 131 PQNIFLTSNGLVKLGDFGIS 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 27/115 (23%)

Query: 125 TQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
           TQ PI ++ EY+  GSL D ++      P+   L +   + +A  IA  +A++     + 
Sbjct: 71  TQEPIYIITEYMENGSLVDFLK-----TPEGIKLTINKLIDMAAQIAEGMAFIER---KN 122

Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
            I RD + +NIL +E    K+ DF                   LARL ED+ Y A
Sbjct: 123 YIHRDLRAANILVSETLCCKIADFG------------------LARLIEDNEYTA 159

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 11/87 (12%)

Query: 122 CLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF 180
           C +T+  +  V EY+N G L   ++ Q     +H           + +I+ A+ YLH   
Sbjct: 64  CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY-------SAEISLALNYLH--- 113

Query: 181 PRPVIFRDFKLSNILFNEENVAKLFDF 207
            R +I+RD KL N+L + E   KL D+
Sbjct: 114 ERGIIYRDLKLDNVLLDSEGHIKLTDY 140

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 14/112 (12%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQH----------EPLLLTH 161
           H+    L+G C +     +V EY   G+L D +R    P  ++          E L    
Sbjct: 75  HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLR-ARRPPGEYASPDDPRPPEETLTQKD 133

Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
            +  A  +A  + +L     +  I RD    N+L  E++V K+ DF  +  I
Sbjct: 134 LVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDI 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LV + +  G L  R  +    +   E      +  I  +I  A+ YLH    + +I RD 
Sbjct: 77  LVVDLLLGGDL--RYHLSQKVKFSEE----QVKFWIC-EIVLALEYLH---SKGIIHRDI 126

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
           K  NIL +E+    + DF+ +  +    L T 
Sbjct: 127 KPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 40.3 bits (94), Expect = 7e-04
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 8/92 (8%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LV   +N G L   I    NP  + E  L       A +I   +  LH       ++RD 
Sbjct: 77  LVLTIMNGGDLKFHIYNMGNPGFEEERALF-----YAAEILCGLEDLH---RENTVYRDL 128

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
           K  NIL ++    ++ D   ++ IPEGE + G
Sbjct: 129 KPENILLDDYGHIRISDLGLAVKIPEGESIRG 160

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 40.1 bits (94), Expect = 9e-04
 Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           KIA  I  A+ YLH      VI RD K SN+L N     KL DF  S
Sbjct: 107 KIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGIS 151

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 20/154 (12%)

Query: 60  YDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
           +   + I K SF  +YK       Q   I V+  + ++  + D     I + SQ   R  
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDI-QQEIQFLSQC--RSP 59

Query: 116 F--KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
           +  K  G  L+     ++ EY   GS  D ++    P    E  +      I +++   +
Sbjct: 60  YITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK----PGKLDETYIAF----ILREVLLGL 111

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            YLH       I RD K +NIL +EE   KL DF
Sbjct: 112 EYLH---EEGKIHRDIKAANILLSEEGDVKLADF 142

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 12/101 (11%)

Query: 109 QMIHRCFFKLIGCCLETQIP--ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
           ++ H    +L             +VFEY++     D   +  +P+ +      +      
Sbjct: 54  KLRHPNIVRLKEIVTSKGKGSIYMVFEYMD----HDLTGLLDSPEVK---FTESQIKCYM 106

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
           K +   + YLH      ++ RD K SNIL N + V KL DF
Sbjct: 107 KQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADF 144

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 15/112 (13%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN---PQPQHEPLLLTHRLK 164
           +++ H+   +L+G  L   + I V E ++ G+L + +R +        Q         L+
Sbjct: 54  TKLHHKNLVRLLGVILHNGLYI-VMELMSKGNLVNFLRTRGRALVSVIQ--------LLQ 104

Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
            + D+A  + YL     + ++ RD    NIL +E+ VAK+ DF  +     G
Sbjct: 105 FSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 22/141 (15%)

Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMI-----HRCFFKLIGCCLETQIPILVFEYINCG 138
           + ++K DA++  + D     +V   +M+     H+    L+G C +     ++ EY + G
Sbjct: 52  VKMLKDDATEKDLSD-----LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 106

Query: 139 SLADRIRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +L + +R +  P  ++         E +     +     +A  + YL     +  I RD 
Sbjct: 107 NLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDL 163

Query: 190 KLSNILFNEENVAKLFDFSFS 210
              N+L  E NV K+ DF  +
Sbjct: 164 AARNVLVTENNVMKIADFGLA 184

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 122 CLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF 180
           C +T   + LV EY+N G L   ++ Q     +H           A +I  A+ +LH   
Sbjct: 64  CFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFY-------AAEICIALNFLH--- 113

Query: 181 PRPVIFRDFKLSNILFNEENVAKLFDF 207
            R +I+RD KL N+L + +   KL D+
Sbjct: 114 ERGIIYRDLKLDNVLLDADGHIKLTDY 140

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 14/91 (15%)

Query: 129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
            +  E+++CGSL DRI  +  P P     +L    KIA  +   + YL+      ++ RD
Sbjct: 79  CMCMEFMDCGSL-DRIYKKGGPIP---VEILG---KIAVAVVEGLTYLY--NVHRIMHRD 129

Query: 189 FKLSNILFNEENVAKLFDFSFSISIPEGELL 219
            K SNIL N     KL DF  S     GEL+
Sbjct: 130 IKPSNILVNSRGQIKLCDFGVS-----GELI 155

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 26/130 (20%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
           ++ H    +L+G C       ++ E++  G+L D +R     + +   ++L   L +A  
Sbjct: 58  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVL---LYMATQ 112

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
           I++A+ YL     +  I RD    N L  E ++ K+ DF                   L+
Sbjct: 113 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG------------------LS 151

Query: 229 RLNEDDGYVA 238
           RL   D Y A
Sbjct: 152 RLMTGDTYTA 161

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 20/124 (16%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQH-------------- 154
           Q+ H    KL G C +    +L+ EY   GSL   +R      P +              
Sbjct: 59  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118

Query: 155 ---EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 211
                L +   +  A  I+  + YL       ++ RD    N+L  E    K+ DF  S 
Sbjct: 119 PDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSR 175

Query: 212 SIPE 215
            + E
Sbjct: 176 DVYE 179

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 41/149 (27%), Positives = 56/149 (37%), Gaps = 35/149 (23%)

Query: 87  MKFDASKPRMYDCCINNIVYASQMIHRCF----------------FKLIGCCLETQIPIL 130
           ++ DA+  RM +       YAS+  HR F                  L+G C       L
Sbjct: 33  LRMDAAIKRMKE-------YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85

Query: 131 VFEYINCGSLADRIR----IQHNP-----QPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
             EY   G+L D +R    ++ +P           L     L  A D+A  + YL     
Sbjct: 86  AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---Q 142

Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           +  I RD    NIL  E  VAK+ DF  S
Sbjct: 143 KQFIHRDLAARNILVGENYVAKIADFGLS 171

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 14/116 (12%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNP--------QPQHE--PL 157
           + + H    K  G C +    I+VFEY+  G L   +R  H P        QP+     L
Sbjct: 62  TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLR-AHGPDAMILVDGQPRQAKGEL 120

Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
            L+  L IA  IA+ + YL     +  + RD    N L     + K+ DF  S  +
Sbjct: 121 GLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV 173

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           L+ +Y+N G L       H  Q +H       R+ IA +I  A+ +LH      +I+RD 
Sbjct: 82  LILDYVNGGEL-----FTHLYQREHFTESEV-RVYIA-EIVLALDHLH---QLGIIYRDI 131

Query: 190 KLSNILFNEENVAKLFDFSFS 210
           KL NIL + E    L DF  S
Sbjct: 132 KLENILLDSEGHVVLTDFGLS 152

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 56/229 (24%), Positives = 84/229 (36%), Gaps = 49/229 (21%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H    KLIG C   +   L+ EYI   +L++ +R           L    R KIA  IA 
Sbjct: 742 HPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----------NLSWERRRKIAIGIAK 791

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL---------FDFSFSIS----IPEG-- 216
           A+ +LH      V+  +     I+ + ++   L          D    IS     PE   
Sbjct: 792 ALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRE 851

Query: 217 ------------------ELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDP 258
                             ELLTG    D     E   + ++ +  +  + +  L+  IDP
Sbjct: 852 TKDITEKSDIYGFGLILIELLTGKSPADA----EFGVHGSIVEWARYCYSDCHLDMWIDP 907

Query: 259 LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
            I GD S +  + ++    +L   C    P  RP   DV K L+   RS
Sbjct: 908 SIRGDVSVN--QNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954

Length = 968

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 155 EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            PL L   + I + +  A+AYLH    R +I RD K  NI  +E   A L DF
Sbjct: 180 GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDF 229

Length = 392

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 11/94 (11%)

Query: 115 FFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
           F   +  C +T   +  V EY+N G L   I+     +   EP    H +  A +IA  +
Sbjct: 62  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFK---EP----HAVFYAAEIAIGL 114

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            +LH    + +I+RD KL N++ + E   K+ DF
Sbjct: 115 FFLH---SKGIIYRDLKLDNVMLDAEGHIKIADF 145

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           K+   I  A+ YL       VI RD K SNIL +     KL DF  S
Sbjct: 118 KMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGIS 162

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 16/81 (19%)

Query: 130 LVFEYI--NCGSLADRIRIQHNPQPQHEPLLLTHRLK-IAKDIANAIAYLHVGFPRPVIF 186
           LV EY   +  SL D     + P P  E      ++K +   +   + YLH  F   +I 
Sbjct: 85  LVMEYCEQDLASLLD-----NMPTPFSES-----QVKCLMLQLLRGLQYLHENF---IIH 131

Query: 187 RDFKLSNILFNEENVAKLFDF 207
           RD K+SN+L  ++   K+ DF
Sbjct: 132 RDLKVSNLLLTDKGCLKIADF 152

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	309
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.98
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.98
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.98
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.98
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.98
PHA03209	357	serine/threonine kinase US3; Provisional	99.98
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.98
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.98
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.98
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.98
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.98
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.98
PHA03211	461	serine/threonine kinase US3; Provisional	99.98
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.98
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.98
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.98
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.98
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.98
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.98
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.98
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.97
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.97
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.97
KOG0584	632	consensus Serine/threonine protein kinase [General	99.97
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
KOG3653	534	consensus Transforming growth factor beta/activin	99.97
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.97
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.96
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.96
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.95
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.95
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.95
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.94
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.94
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.94
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.94
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.94
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.94
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.93
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.92
KOG1152	772	consensus Signal transduction serine/threonine kin	99.92
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.92
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.92
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.92
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.92
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.91
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.91
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.91
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.9
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.9
PRK10345	210	hypothetical protein; Provisional	99.89
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.88
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.87
PRK14879	211	serine/threonine protein kinase; Provisional	99.86
smart00090	237	RIO RIO-like kinase.	99.86
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.86
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.85
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.85
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.84
PRK12274	218	serine/threonine protein kinase; Provisional	99.84
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.83
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.83
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.83
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.82
PLN00181	793	protein SPA1-RELATED; Provisional	99.82
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.79
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.78
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.77
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.77
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.77
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.76
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.76
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.74
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.72
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.7
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.7
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.66
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.55
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.55
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.55
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.54
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.53
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.47
KOG3087	229	consensus Serine/threonine protein kinase [General	99.45
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.44
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.39
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.32
KOG1243	690	consensus Protein kinase [General function predict	99.32
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.29
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.24
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.23
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.17
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.16
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.11
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.11
PRK09902	216	hypothetical protein; Provisional	99.08
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.03
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.0
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.92
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.82
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.77
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.69
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.69
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.66
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.56
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.55
PF01636	239	APH: Phosphotransferase enzyme family This family	98.55
PLN02876	822	acyl-CoA dehydrogenase	98.48
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.4
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.39
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.25
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.2
PRK10593	297	hypothetical protein; Provisional	98.19
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.15
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.15
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	98.11
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.06
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.99
PRK05231	319	homoserine kinase; Provisional	97.94
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.91
COG4248	637	Uncharacterized protein with protein kinase and he	97.82
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.69
PLN02756	418	S-methyl-5-thioribose kinase	97.68
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.66
PLN02236	344	choline kinase	97.54
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.47
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.46
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.45
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.37
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.34
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.33
KOG2270	520	consensus Serine/threonine protein kinase involved	97.31
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.28
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.09
PRK12396	409	5-methylribose kinase; Reviewed	97.05
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.01
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	97.01
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.87
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.79
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.73
PTZ00384	383	choline kinase; Provisional	96.54
COG2334	331	Putative homoserine kinase type II (protein kinase	96.41
PRK11768	325	serine/threonine protein kinase; Provisional	96.25
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.12
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.92
PTZ00296	442	choline kinase; Provisional	95.88
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.62
PRK10271	188	thiK thiamine kinase; Provisional	95.02

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-49  Score=348.49  Aligned_cols=250  Identities=37%  Similarity=0.595  Sum_probs=208.7

Q ss_pred             CcccccHHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeee
Q 045682           44 PYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCC  122 (309)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~  122 (309)
                      +...|+++++..+|++|+....||+|+||.||+|.. ++..||||++.........+|.+|+.++.+++|||+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            677899999999999999999999999999999999 6699999988776533145699999999999999999999999


Q ss_pred             eeCC-ceEEEEEeccCCChhhhhhhhCCCCCCCC-CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC
Q 045682          123 LETQ-IPILVFEYINCGSLADRIRIQHNPQPQHE-PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN  200 (309)
Q Consensus       123 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~  200 (309)
                      .+++ ..+|||||+++|+|.++|..      ... +++|..|++||.++|+||+|||+.+..+||||||||+|||+|+++
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~------~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~  214 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHG------KKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF  214 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCC------CCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC
Confidence            9988 49999999999999999862      122 899999999999999999999987777899999999999999999


Q ss_pred             cEEEeecccccccCC-Cc--------------------------------------cccccccccccccccCCCcccHHH
Q 045682          201 VAKLFDFSFSISIPE-GE--------------------------------------LLTGLRAFDLARLNEDDGYVALRD  241 (309)
Q Consensus       201 ~~kl~Dfg~a~~~~~-~~--------------------------------------~~~g~~~~~~~~~~~~~~~~~~~~  241 (309)
                      ++||+|||+|+..+. ..                                      +++|+.+......   .....+..
T Consensus       215 ~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~---~~~~~l~~  291 (361)
T KOG1187|consen  215 NAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP---RGELSLVE  291 (361)
T ss_pred             CEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC---cccccHHH
Confidence            999999999987764 21                                      3334433332210   12233667


Q ss_pred             HHHHHhhccccccccccccc-CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          242 HVKKYFEEDRLNEIIDPLIM-GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      |++..+....+.+++|+.+. +..+.   ......+..++.+|++.+|.+||+|.||+++|+.+.
T Consensus       292 w~~~~~~~~~~~eiiD~~l~~~~~~~---~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  292 WAKPLLEEGKLREIVDPRLKEGEYPD---EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             HHHHHHHCcchhheeCCCccCCCCCh---HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            77777777788999999887 33321   156777999999999999999999999999997765

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-46  Score=331.31  Aligned_cols=248  Identities=23%  Similarity=0.323  Sum_probs=209.7

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEeCCe-EEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFCQER-LISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .+.++.....+...+.||+|-||.|+.|.|++. .||+|.++... -..+.|.+|+.+|++|+|+|||+++|+|..+...
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi  276 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI  276 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence            344444445555677899999999999999665 99999998763 3347799999999999999999999999998899


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      +|||||++.|+|.+||+.     ..+..+...+.+.++.|||+||+||+   ++++|||||.++||||++++.|||+|||
T Consensus       277 yIVtE~m~~GsLl~yLr~-----~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFG  348 (468)
T KOG0197|consen  277 YIVTEYMPKGSLLDYLRT-----REGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFG  348 (468)
T ss_pred             EEEEEecccCcHHHHhhh-----cCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccc
Confidence            999999999999999973     25678999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCc-----------cccccccccccccccCCCcccHHHHHHHHhh-------cccccccccccccCCCCCCchH
Q 045682          209 FSISIPEGE-----------LLTGLRAFDLARLNEDDGYVALRDHVKKYFE-------EDRLNEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       209 ~a~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~  270 (309)
                      +|+...+++           -++.+..+.....+..+++|+++..+|+++.       +.+..+++..+..|...+.+. 
T Consensus       349 LAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~-  427 (468)
T KOG0197|consen  349 LARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPE-  427 (468)
T ss_pred             cccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCC-
Confidence            999665554           2333334444445557788999999998864       344567888888888877665 


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .|++++++||..||+.+|++||||..+...|+++...
T Consensus       428 ~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  428 GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            8999999999999999999999999999999998764

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-44  Score=318.12  Aligned_cols=242  Identities=21%  Similarity=0.298  Sum_probs=200.6

Q ss_pred             cCCCccCceeecCCeEEEEEEeCCeE-EEEEEecCCCc--hhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-ceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQERL-ISVMKFDASKP--RMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-IPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~~~~-vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e  133 (309)
                      ..+...+.||.|+||+||+|.|.|.. ||||++.....  ...+.|.+|+.+|.+++|||||+++|+|.+.. ...+|||
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence            33444556999999999999998888 99999987542  22568999999999999999999999999987 7999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEeCCCCCCCeeecCCC-cEEEeeccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP-VIFRDFKLSNILFNEEN-VAKLFDFSFSI  211 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-iiH~dlkp~Nill~~~~-~~kl~Dfg~a~  211 (309)
                      |+++|+|.++|...     ....+++..+++++.|||+||.|||   +.+ ||||||||+|||++.++ ++||+|||+++
T Consensus       121 y~~~GsL~~~l~~~-----~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr  192 (362)
T KOG0192|consen  121 YMPGGSLSVLLHKK-----RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR  192 (362)
T ss_pred             eCCCCcHHHHHhhc-----ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence            99999999998621     3688999999999999999999999   778 99999999999999997 99999999997


Q ss_pred             ccCCC----cccccccccccccccc--------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHH
Q 045682          212 SIPEG----ELLTGLRAFDLARLNE--------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       212 ~~~~~----~~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      .....    .-.+|...+.+|+...        ..+.++++...|++..+...      .++...+..+...+..+..++
T Consensus       193 ~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~  272 (362)
T KOG0192|consen  193 EKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECP  272 (362)
T ss_pred             eeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCC
Confidence            76532    1257888888887655        23567888899998766422      334444444444445455688


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..+..|+.+||+.||+.||++.+|+..|+.+...
T Consensus       273 ~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~  306 (362)
T KOG0192|consen  273 PHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH  306 (362)
T ss_pred             HHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999988764

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-44  Score=306.87  Aligned_cols=232  Identities=17%  Similarity=0.225  Sum_probs=198.1

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-ceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-IPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e~  134 (309)
                      +++..+.||+|..|+||++.+  +++.+|+|.+... ++...+++.+|+++++.++||+||++||+|...+ ...++|||
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            445577899999999999999  7899999999654 4566788999999999999999999999999999 49999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      |++|||++++.       ..+.+++....+++.+|++||.|||+  .+.||||||||+||||++.|.|||||||.++...
T Consensus       160 MDgGSLd~~~k-------~~g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv  230 (364)
T KOG0581|consen  160 MDGGSLDDILK-------RVGRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV  230 (364)
T ss_pred             cCCCCHHHHHh-------hcCCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence            99999999987       55789999999999999999999995  4999999999999999999999999999998876


Q ss_pred             CC--ccccccccccccccccC------CCcccHHHHHHHHhhc-----------ccccccccccccCCCCCCchHHHHHH
Q 045682          215 EG--ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEE-----------DRLNEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       215 ~~--~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .+  ....|...|.+|+...+      .+.|+++-.++++.-+           ..+.++++.+..+..|..+...++++
T Consensus       231 nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~e  310 (364)
T KOG0581|consen  231 NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPE  310 (364)
T ss_pred             hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHH
Confidence            55  35678888888875443      4567777666666433           13456777877777665555459999


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+++..||++||.+|||+.|+++
T Consensus       311 f~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  311 FRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999999999975

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-41  Score=302.57  Aligned_cols=230  Identities=19%  Similarity=0.299  Sum_probs=194.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ..|..+++||+|||+.||.++.  +|..||+|.+.+.   +....+...+||++.++|.|||||+++++|.+.+.+|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4589999999999999999998  8999999999763   4566778999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |+|..++|..+++       ...++++..+..++.||+.||.|||   +.+|||||||..|+|++++.+|||+|||||..
T Consensus        98 ELC~~~sL~el~K-------rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~  167 (592)
T KOG0575|consen   98 ELCHRGSLMELLK-------RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQ  167 (592)
T ss_pred             EecCCccHHHHHH-------hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeee
Confidence            9999999999987       7889999999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCC----ccccccccccccccccC------CCcccHHHHHHHHhh------cccccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEG----ELLTGLRAFDLARLNED------DGYVALRDHVKKYFE------EDRLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~----~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ...+    ..++|.+.|-+|+....      .+.|+++..++.++-      ...+.+..+.+...++..+  ...+.+.
T Consensus       168 le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P--~~ls~~A  245 (592)
T KOG0575|consen  168 LEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP--SHLSAEA  245 (592)
T ss_pred             ecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc--cccCHHH
Confidence            8644    37899999988886542      233444444443332      2334444555555554433  3667889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+||..+|++||.+|||+++|+.
T Consensus       246 ~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  246 KDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhc
Confidence            99999999999999999999974

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.6e-42  Score=317.74  Aligned_cols=250  Identities=21%  Similarity=0.323  Sum_probs=209.1

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeC
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLET  125 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  125 (309)
                      +..+.+....+.||+|.||.||+|...       ...||||.++..... ...+|.+|++++..++|||||+|+|+|..+
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~  561 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG  561 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence            445566777888999999999999973       367999999887655 668899999999999999999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCC-------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQ-------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE  198 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~-------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~  198 (309)
                      ++.++|+|||..|+|.+||..+..+.       ....+++..+.+.||.|||.||.||-   +..+|||||.++|+||++
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge  638 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGE  638 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceecc
Confidence            99999999999999999997653211       11455999999999999999999999   999999999999999999


Q ss_pred             CCcEEEeecccccccCCCcccc---------cc---ccccccccccCCCcccHHHHHHHHhhc-------cccccccccc
Q 045682          199 ENVAKLFDFSFSISIPEGELLT---------GL---RAFDLARLNEDDGYVALRDHVKKYFEE-------DRLNEIIDPL  259 (309)
Q Consensus       199 ~~~~kl~Dfg~a~~~~~~~~~~---------g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  259 (309)
                      +..|||+|||+++.+-..+...         ..   ..+.+...+..++.|+++..+|+.|..       .+-.++++.+
T Consensus       639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i  718 (774)
T KOG1026|consen  639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI  718 (774)
T ss_pred             ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence            9999999999998775544221         22   223334445567889999999998653       3446788888


Q ss_pred             ccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          260 IMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       260 ~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..|.. ...|..|+.+++.||..||+.+|.+||+|++|-.+|+....+
T Consensus       719 ~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  719 RAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             HcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            88888 555679999999999999999999999999999999987654

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.8e-41  Score=288.29  Aligned_cols=234  Identities=18%  Similarity=0.258  Sum_probs=188.7

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch-------hHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR-------MYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      ..+.|...+.||+|+||.|-+|..  +++.||||+++.+...       ......+|+++|++++|||||++++++....
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            446677888999999999999988  8999999999775321       1223579999999999999999999999999


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC---CcEE
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE---NVAK  203 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~---~~~k  203 (309)
                      ..||||||+.||.|.+++.       ..+.+.+..-.-++.|++.|+.|||   +.||+||||||+|||+..+   -.+|
T Consensus       250 s~YmVlE~v~GGeLfd~vv-------~nk~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llK  319 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVV-------ANKYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLK  319 (475)
T ss_pred             ceEEEEEEecCccHHHHHH-------hccccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEE
Confidence            9999999999999999987       5677888888999999999999999   9999999999999999765   7899


Q ss_pred             EeecccccccCCCc---cccccccccccccccCCCc--ccHHHHHHHH-------------hhcccc-cccccccccCCC
Q 045682          204 LFDFSFSISIPEGE---LLTGLRAFDLARLNEDDGY--VALRDHVKKY-------------FEEDRL-NEIIDPLIMGDR  264 (309)
Q Consensus       204 l~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~-~~~~~~~~~g~~  264 (309)
                      |+|||+|+...+..   .++|.+.|.+|+.....+.  .+-..++|++             |.+..- ..+.+++..|.+
T Consensus       320 ItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y  399 (475)
T KOG0615|consen  320 ITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY  399 (475)
T ss_pred             ecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc
Confidence            99999999886553   6889999999987654332  2223344443             222111 224556666666


Q ss_pred             CCCc--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 SCSG--KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 ~~~~--~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..-+  ....+++..+||.++|..||++|||++|+++
T Consensus       400 ~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  400 AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            5432  2366889999999999999999999999874

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.9e-42  Score=282.06  Aligned_cols=241  Identities=21%  Similarity=0.285  Sum_probs=196.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeee-eeeeCCc-eEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIG-CCLETQI-PILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g-~~~~~~~-~~lv  131 (309)
                      .+|...+.||.|.||.||++..  +|..||.|.++-.  .......+..|+.+|++|+|||||++++ .+.++++ .+||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            3466788999999999999998  8999999998743  3445567899999999999999999999 4455555 8999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP--VIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      ||||..|+|.+.++..+   .+...+++..+|+++.|++.||.++|... .+  |+||||||.||+++.+|.|||+|||+
T Consensus        99 mE~c~~GDLsqmIk~~K---~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL  174 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFK---KQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGL  174 (375)
T ss_pred             HHhhcccCHHHHHHHHH---hccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchh
Confidence            99999999999987543   26778999999999999999999999421 44  99999999999999999999999999


Q ss_pred             ccccCCCc----cccccccccccccccC------CCcccHHHHHHHH------hhcccccccccccccCCCCCCchHHHH
Q 045682          210 SISIPEGE----LLTGLRAFDLARLNED------DGYVALRDHVKKY------FEEDRLNEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       210 a~~~~~~~----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      ++.+.+..    .+.|++.+..|+....      ++.|+++..++++      |.+.++.++-..+..|++++.+...++
T Consensus       175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS  254 (375)
T KOG0591|consen  175 GRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYS  254 (375)
T ss_pred             HhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhh
Confidence            99887765    4557777766665433      2334444444333      667788888889999999888878999


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ..+..||..|+..||+.||+...+++.+.
T Consensus       255 ~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  255 TDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             hHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence            99999999999999999999655555444

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-40  Score=284.07  Aligned_cols=231  Identities=21%  Similarity=0.335  Sum_probs=187.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .++|.....||.|+||+||+|++  ++..||||.+...  .....+....|+++|+.++|||||.+++++..++..||||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            46788888899999999999999  7899999999776  4455667899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC------CcEEEee
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE------NVAKLFD  206 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~------~~~kl~D  206 (309)
                      |||.||+|.+|+.       ..+.+++..+..++.|||.||++||   +++||||||||+||||+..      -.+||+|
T Consensus        89 EyC~gGDLs~yi~-------~~~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIAD  158 (429)
T KOG0595|consen   89 EYCNGGDLSDYIR-------RRGRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIAD  158 (429)
T ss_pred             EeCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecc
Confidence            9999999999997       6678999999999999999999999   9999999999999999764      4689999


Q ss_pred             cccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCC-CCCchH
Q 045682          207 FSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDR-SCSGKE  270 (309)
Q Consensus       207 fg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~-~~~~~~  270 (309)
                      ||+|+...++.   .++|.+-|.+|+...      ..+.|+++..+|....+...      .+++-....+.. .+..+.
T Consensus       159 FGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~  238 (429)
T KOG0595|consen  159 FGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPA  238 (429)
T ss_pred             cchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhh
Confidence            99999998765   678988888887653      33567777777777555433      233333333333 222333


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDV  297 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l  297 (309)
                      ..+..+.+|+..-++.+|.+|-++.+-
T Consensus       239 ~~s~~~~~Ll~~ll~~~~~~~~~~~~~  265 (429)
T KOG0595|consen  239 ELSNPLRELLISLLQRNPKDRISFEDF  265 (429)
T ss_pred             hccCchhhhhhHHHhcCccccCchHHh
Confidence            455667788888888888888766554

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-41  Score=299.95  Aligned_cols=254  Identities=19%  Similarity=0.284  Sum_probs=200.1

Q ss_pred             cccccHHHHHHHhcCCCccCceeecCCeEEEEEEe--C-C--eE-EEEEEecCC---CchhHHHHHHHHHHHhhccCCcc
Q 045682           45 YCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--Q-E--RL-ISVMKFDAS---KPRMYDCCINNIVYASQMIHRCF  115 (309)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~-~--~~-vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni  115 (309)
                      ..+...+.|+...++....++||+|+||.||+|.+  . +  .. ||+|..+..   ......+|++|++++.+++||||
T Consensus       144 ~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NV  223 (474)
T KOG0194|consen  144 KRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNV  223 (474)
T ss_pred             cccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCE
Confidence            34566677787888888889999999999999999  2 2  23 899998863   34566889999999999999999


Q ss_pred             eeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCee
Q 045682          116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL  195 (309)
Q Consensus       116 v~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nil  195 (309)
                      |++||++....+.++|||+|+||+|.+||+.      ....++..++..++.+.|.||+|||   ++++|||||.++|+|
T Consensus       224 Vr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k------~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL  294 (474)
T KOG0194|consen  224 VRFYGVAVLEEPLMLVMELCNGGSLDDYLKK------NKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCL  294 (474)
T ss_pred             EEEEEEEcCCCccEEEEEecCCCcHHHHHHh------CCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHhe
Confidence            9999999999999999999999999999972      2336999999999999999999999   999999999999999


Q ss_pred             ecCCCcEEEeecccccccCCCcccc--cccc--ccccc------cccCCCcccHHHHHHHHhhc-------ccccccccc
Q 045682          196 FNEENVAKLFDFSFSISIPEGELLT--GLRA--FDLAR------LNEDDGYVALRDHVKKYFEE-------DRLNEIIDP  258 (309)
Q Consensus       196 l~~~~~~kl~Dfg~a~~~~~~~~~~--g~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  258 (309)
                      ++.++.+||+|||+++......+..  .+.|  +.+|+      .+..++.|+++...|+.|..       ....++...
T Consensus       295 ~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~k  374 (474)
T KOG0194|consen  295 YSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAK  374 (474)
T ss_pred             ecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHH
Confidence            9999999999999988764211111  1112  12222      22334555666666666543       223344444


Q ss_pred             cccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          259 LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       259 ~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +....++.+.+...+.++..++.+||..+|++||||.++.+.|+.+.+.
T Consensus       375 I~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  375 IVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK  423 (474)
T ss_pred             HHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence            5354555555568889999999999999999999999999999988764

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.1e-39  Score=269.42  Aligned_cols=226  Identities=22%  Similarity=0.317  Sum_probs=171.0

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .|+...++|+|+||.||++++  +|+.||||++....  +...+..++|+++|+++.|||+|.++.+|......+||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            477788899999999999999  89999999997753  33445678999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      |+.. +.+-|+.      ....++...+.+++.|++.|+.|||   +.++|||||||+||||+.+|.+||||||+|+...
T Consensus        83 ~dhT-vL~eLe~------~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~  152 (396)
T KOG0593|consen   83 CDHT-VLHELER------YPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLS  152 (396)
T ss_pred             cchH-HHHHHHh------ccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhc
Confidence            9984 4444431      4567899999999999999999999   9999999999999999999999999999999886


Q ss_pred             -CCc---------------cccccccccccccccCCCcccHHHHHHHHhhcccc-----------------cc-------
Q 045682          215 -EGE---------------LLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRL-----------------NE-------  254 (309)
Q Consensus       215 -~~~---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-------  254 (309)
                       +++               ++.|..+|+.+.     +.|.++..+.+++.+..+                 +.       
T Consensus       153 ~pgd~YTDYVATRWYRaPELLvGDtqYG~pV-----DiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~  227 (396)
T KOG0593|consen  153 APGDNYTDYVATRWYRAPELLVGDTQYGKPV-----DIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQS  227 (396)
T ss_pred             CCcchhhhhhhhhhccChhhhcccCcCCCcc-----cchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHH
Confidence             554               333444443332     445555555554333211                 00       


Q ss_pred             cc--cccccCCCCCCch---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          255 II--DPLIMGDRSCSGK---------EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       255 ~~--~~~~~g~~~~~~~---------~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++  .+...|-.-+.+.         ...+.-+.+++..|++.||.+|++.+|++.
T Consensus       228 iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  228 IFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             HhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            00  1111111111100         133456889999999999999999999873

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-41  Score=304.82  Aligned_cols=238  Identities=19%  Similarity=0.270  Sum_probs=196.1

Q ss_pred             CCCccCceeecCCeEEEEEEe--C---CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--Q---ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .....++||.|.||.||+|++  .   ...||||.++... ......|+.|+.||.+++||||++|.|+.......+||+
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            345577899999999999999  3   3779999998864 455678999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |||++|+|+.||+.      ..+.+.+-++..++++||.||.||.   +.++|||||.++||||+.+..+|++|||+++.
T Consensus       710 EyMENGsLDsFLR~------~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRv  780 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQ------NDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  780 (996)
T ss_pred             hhhhCCcHHHHHhh------cCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceee
Confidence            99999999999973      3566999999999999999999999   99999999999999999999999999999997


Q ss_pred             cCCCc-----ccccccccc--------ccccccCCCcccHHHHHHHHh-------hcccccccccccccCCCCCCchHHH
Q 045682          213 IPEGE-----LLTGLRAFD--------LARLNEDDGYVALRDHVKKYF-------EEDRLNEIIDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       213 ~~~~~-----~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~  272 (309)
                      ..++.     ..-|+-|..        .-..+..++.|+++..+|+.+       -+.+-.+++..+..|...++ |.+|
T Consensus       781 ledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPp-PmDC  859 (996)
T KOG0196|consen  781 LEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPP-PMDC  859 (996)
T ss_pred             cccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCC-CCCC
Confidence            74432     233444443        222333445566555555542       22344567888877776544 4599


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      +..|++||..||++|..+||+|.||+..|.++..
T Consensus       860 P~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  860 PAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             cHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999864

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=5.6e-38  Score=272.94  Aligned_cols=246  Identities=14%  Similarity=0.196  Sum_probs=190.7

Q ss_pred             cccccHHHHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchh---HHHHHHHHHHHhhccCCcceeeeee
Q 045682           45 YCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRM---YDCCINNIVYASQMIHRCFFKLIGC  121 (309)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~g~  121 (309)
                      ...++.+++.     ......||+|++|.||+|.++++.||||.+.......   .+.|.+|+.+|.+++||||++++|+
T Consensus        12 ~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~   86 (283)
T PHA02988         12 IKCIESDDID-----KYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF   86 (283)
T ss_pred             ceecCHHHcC-----CCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence            3445555552     2333679999999999999999999999987653222   4678899999999999999999999


Q ss_pred             eee----CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeee
Q 045682          122 CLE----TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILF  196 (309)
Q Consensus       122 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill  196 (309)
                      +.+    ....++||||+++|+|.+++.       ....+++.....++.|++.||.|||   . .+++||||||+|||+
T Consensus        87 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-------~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill  156 (283)
T PHA02988         87 IIDIVDDLPRLSLILEYCTRGYLREVLD-------KEKDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLV  156 (283)
T ss_pred             EEecccCCCceEEEEEeCCCCcHHHHHh-------hCCCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEE
Confidence            876    346789999999999999986       4567899999999999999999999   6 488999999999999


Q ss_pred             cCCCcEEEeecccccccCCCc-cccccccccccccc--------cCCCcccHHHHHHHHhhcccc------ccccccccc
Q 045682          197 NEENVAKLFDFSFSISIPEGE-LLTGLRAFDLARLN--------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIM  261 (309)
Q Consensus       197 ~~~~~~kl~Dfg~a~~~~~~~-~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  261 (309)
                      +.++.+||+|||+++...... ...|...+.+|+..        ...+.|+++..+|+++.+...      .++.+....
T Consensus       157 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~  236 (283)
T PHA02988        157 TENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN  236 (283)
T ss_pred             CCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            999999999999988644322 12233344444332        235778888888887665432      233334333


Q ss_pred             CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          262 GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       262 g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      +...+..+..++.++.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus       237 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        237 KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             cCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            33333333467789999999999999999999999999999875

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-39  Score=307.38  Aligned_cols=247  Identities=19%  Similarity=0.321  Sum_probs=203.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe---CC----eEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC---QE----RLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~---~~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      ..+.+....||+|.||.||.|.+   ++    ..||||.+... +.+...+|++|..+|+.++|||||+++|+|.+...+
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            45566678899999999999998   33    34999999876 456678899999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      +|++|||.+|+|..||+..+....+...++..+.+.++.|||+|+.||+   ++++|||||.++|+|++....|||+|||
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFG  847 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFG  847 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccc
Confidence            9999999999999999866555555778999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCcccc----cccc--ccccc------cccCCCcccHHHHHHHHhhc-------ccccccccccccCCCCCCch
Q 045682          209 FSISIPEGELLT----GLRA--FDLAR------LNEDDGYVALRDHVKKYFEE-------DRLNEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       209 ~a~~~~~~~~~~----g~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~  269 (309)
                      +|+.+-..+...    +..|  +.+++      .+..++.|+++...|+.|..       ..-.+++...+.|. ..+.|
T Consensus       848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P  926 (1025)
T KOG1095|consen  848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPP  926 (1025)
T ss_pred             hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCC
Confidence            999543333211    1222  12222      33356889999999998653       33356666666666 44556


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..|++.+++||..||+.+|++||+|..|++.+..+.+.
T Consensus       927 ~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  927 SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence            69999999999999999999999999999998888764

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-39  Score=286.64  Aligned_cols=251  Identities=20%  Similarity=0.280  Sum_probs=205.2

Q ss_pred             cccHHHHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee
Q 045682           47 TFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE  124 (309)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  124 (309)
                      ..+.++|++..+.+..+..||+|.||+||+|.|-| .||||.+....  +...+.|.+|+..+++-+|.||+-++|+|..
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            35568888888889999999999999999999977 48999987764  4566889999999999999999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                      ++. .||+.+|+|-+|..+|..      ....++..+.+.|+.|||+||.|||   .++|||||||..||++.++++|||
T Consensus       460 p~~-AIiTqwCeGsSLY~hlHv------~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkI  529 (678)
T KOG0193|consen  460 PPL-AIITQWCEGSSLYTHLHV------QETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKI  529 (678)
T ss_pred             Cce-eeeehhccCchhhhhccc------hhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEE
Confidence            886 999999999999999863      4578999999999999999999999   999999999999999999999999


Q ss_pred             eecccccccCC------Ccccccccccccccc---------ccCCCcccHHHHHHHHhhc------ccccccccccccCC
Q 045682          205 FDFSFSISIPE------GELLTGLRAFDLARL---------NEDDGYVALRDHVKKYFEE------DRLNEIIDPLIMGD  263 (309)
Q Consensus       205 ~Dfg~a~~~~~------~~~~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~  263 (309)
                      +|||++.....      -+.-+|..-|.+++.         ...++++.++..+++++.+      ..-.+++-.+-.|.
T Consensus       530 gDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~  609 (678)
T KOG0193|consen  530 GDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGY  609 (678)
T ss_pred             ecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccc
Confidence            99999864321      123334444444432         2234677777777777543      33456666666775


Q ss_pred             CCCC---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          264 RSCS---GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       264 ~~~~---~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ..+.   ....++.++.+|+..||..+|++||++.+|+.+|+.+..++
T Consensus       610 l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~  657 (678)
T KOG0193|consen  610 LMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL  657 (678)
T ss_pred             cCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence            5443   34577889999999999999999999999999999987753

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-38  Score=271.49  Aligned_cols=235  Identities=17%  Similarity=0.241  Sum_probs=182.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC--ceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ--IPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv~  132 (309)
                      ..++..++.||+|+||.||.+..  +|...|||..........+.+.+|+.+|.+++|||||+++|......  .+++.|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            34577788999999999999999  58999999987764333677899999999999999999999865544  689999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-CCcEEEeeccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLFDFSFSI  211 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~  211 (309)
                      ||+++|||.+++...      ++.+++..+..+..||+.||.|||   +++||||||||+|||++. ++.+||+|||+++
T Consensus        96 Ey~~~GsL~~~~~~~------g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRY------GGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAK  166 (313)
T ss_pred             eccCCCcHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccc
Confidence            999999999999722      227999999999999999999999   999999999999999999 7999999999998


Q ss_pred             ccCC-------CccccccccccccccccCCCcccHHHHHHHH-------hhccc-c------cccccccccCCCCCCchH
Q 045682          212 SIPE-------GELLTGLRAFDLARLNEDDGYVALRDHVKKY-------FEEDR-L------NEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       212 ~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~------~~~~~~~~~g~~~~~~~~  270 (309)
                      ....       .....|.+.+.+|+............++|.+       +.+.. +      .+.+-.+..+...+..+.
T Consensus       167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~  246 (313)
T KOG0198|consen  167 KLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPD  246 (313)
T ss_pred             ccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCc
Confidence            7653       2246677777777765532222234555554       33211 1      111122222222234455


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ..+.+..+++..|++.+|+.|||+.++++.
T Consensus       247 ~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h  276 (313)
T KOG0198|consen  247 SLSDEAKDFLRKCFKRDPEKRPTAEELLEH  276 (313)
T ss_pred             ccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence            678899999999999999999999999864

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-39  Score=287.98  Aligned_cols=249  Identities=18%  Similarity=0.292  Sum_probs=205.9

Q ss_pred             cHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           49 SAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        49 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      .+++|+-...+....++||.|-||.||.|.|  -...||||.++... -..++|+.|+.+|+.+.|||+|+|+|+|..+.
T Consensus       258 n~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep  336 (1157)
T KOG4278|consen  258 NADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP  336 (1157)
T ss_pred             CcchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence            3578888888888899999999999999999  56889999987653 44688999999999999999999999999999


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      .+|||+|||..|+|.+||..+     +...++.-..+.++.||+.||.||.   .+++|||||.++|+|+.++..||++|
T Consensus       337 PFYIiTEfM~yGNLLdYLRec-----nr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvAD  408 (1157)
T KOG4278|consen  337 PFYIITEFMCYGNLLDYLREC-----NRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVAD  408 (1157)
T ss_pred             CeEEEEecccCccHHHHHHHh-----chhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeec
Confidence            999999999999999999844     5667888888999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCcc-----------ccccccccccccccCCCcccHHHHHHHH-------hhcccccccccccccCCCCCCc
Q 045682          207 FSFSISIPEGEL-----------LTGLRAFDLARLNEDDGYVALRDHVKKY-------FEEDRLNEIIDPLIMGDRSCSG  268 (309)
Q Consensus       207 fg~a~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~  268 (309)
                      ||+++....+..           +|......+......++.|.+....|+.       +++..+.++.+-+. .++....
T Consensus       409 FGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLE-kgyRM~~  487 (1157)
T KOG4278|consen  409 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLE-KGYRMDG  487 (1157)
T ss_pred             cchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHh-ccccccC
Confidence            999998876642           2222222233333445667777777766       33344444444444 4444556


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ++.|++.+++||+.||+.+|.+||++.++-+.++.+..+
T Consensus       488 PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~  526 (1157)
T KOG4278|consen  488 PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS  526 (1157)
T ss_pred             CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence            679999999999999999999999999999999988765

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=4.3e-38  Score=280.45  Aligned_cols=247  Identities=17%  Similarity=0.274  Sum_probs=185.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeC-
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLET-  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~-  125 (309)
                      ..++|...+.||+|+||.||+|.+       ++..||+|.+.... ......+.+|+.++..+ +||||++++|+|... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            456788899999999999999975       23679999987543 23446789999999999 899999999988764 


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCC-------------------------------------------------------
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNP-------------------------------------------------------  150 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------  150 (309)
                      +..++||||+++|+|.+++......                                                       
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            4688999999999999998642110                                                       


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc--c----cccccc
Q 045682          151 QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE--L----LTGLRA  224 (309)
Q Consensus       151 ~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~----~~g~~~  224 (309)
                      .....++++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......  .    ..+...
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  241 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK  241 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence            001245888999999999999999999   9999999999999999999999999999998653321  1    112223


Q ss_pred             cccccc------ccCCCcccHHHHHHHHhh-ccccc------c-cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCC
Q 045682          225 FDLARL------NEDDGYVALRDHVKKYFE-EDRLN------E-IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVD  290 (309)
Q Consensus       225 ~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~-~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~  290 (309)
                      |.+|+.      ....+.|+++..+++++. +....      + +......+.. ...+...+..+.+|+.+||+.||.+
T Consensus       242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~  320 (338)
T cd05102         242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR-MRAPENATPEIYRIMLACWQGDPKE  320 (338)
T ss_pred             ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHccCChhh
Confidence            444442      223577888888887764 32211      1 1112222222 2223356678999999999999999


Q ss_pred             CCCHHHHHHHHHHHHH
Q 045682          291 RPTMVDVAKKLKQMYR  306 (309)
Q Consensus       291 RPt~~~l~~~L~~l~~  306 (309)
                      |||+.+|++.|+++..
T Consensus       321 RPs~~el~~~l~~~~~  336 (338)
T cd05102         321 RPTFSALVEILGDLLQ  336 (338)
T ss_pred             CcCHHHHHHHHHHHHh
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-38  Score=279.61  Aligned_cols=237  Identities=20%  Similarity=0.287  Sum_probs=194.8

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC----Cc-hhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCC
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS----KP-RMYDCCINNIVYASQMI-HRCFFKLIGCCLETQ  126 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~  126 (309)
                      ...+.|..++.||+|+||.|+.|.+  +++.||+|.+...    .. ...+.+.+|+.+++.++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3457899999999999999999988  7899999977664    12 23456678999999998 999999999999999


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-CcEEEe
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-NVAKLF  205 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-~~~kl~  205 (309)
                      ..++||||+.+|+|.+++.       ..+.+.+..+..++.|++.|++|||   +.+|+||||||+|||++.+ +++||+
T Consensus        94 ~~~ivmEy~~gGdL~~~i~-------~~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~  163 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIV-------NKGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLS  163 (370)
T ss_pred             eEEEEEEecCCccHHHHHH-------HcCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEe
Confidence            9999999999999999997       5688999999999999999999999   9999999999999999999 999999


Q ss_pred             ecccccccC-C---CccccccccccccccccCCC-cccHHHHHHHH-------------hhcccccccccccccCCCCCC
Q 045682          206 DFSFSISIP-E---GELLTGLRAFDLARLNEDDG-YVALRDHVKKY-------------FEEDRLNEIIDPLIMGDRSCS  267 (309)
Q Consensus       206 Dfg~a~~~~-~---~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~  267 (309)
                      |||++.... .   ....+|.++|.+|+...... +.....++|+.             |.......+...+..|.+..+
T Consensus       164 DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p  243 (370)
T KOG0583|consen  164 DFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIP  243 (370)
T ss_pred             ccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCC
Confidence            999999773 2   34678999999988876655 55566666655             223333334444555655544


Q ss_pred             chHHH-HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          268 GKEQQ-LQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       268 ~~~~~-~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .  .. +.++..|+.+|+..||..|+|+.+|+ .-..+
T Consensus       244 ~--~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~  278 (370)
T KOG0583|consen  244 S--YLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWF  278 (370)
T ss_pred             C--CcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhh
Confidence            2  33 78899999999999999999999998 43333

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-37  Score=278.91  Aligned_cols=239  Identities=20%  Similarity=0.296  Sum_probs=198.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEeC----C--eEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQ----E--RLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~----~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      .........||+|-||.||+|+++    |  -.||||..+.. .+...+.|+.|+-+++.++||||++++|+|.+. +.|
T Consensus       388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~W  466 (974)
T KOG4257|consen  388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW  466 (974)
T ss_pred             hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence            344556778999999999999992    2  45899998875 345567799999999999999999999999874 589


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +|||.++-|.|..||+      .+...++......++.||+.||+|||   +.++|||||.++|||+.+.-.|||+|||+
T Consensus       467 ivmEL~~~GELr~yLq------~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGL  537 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQ------QNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGL  537 (974)
T ss_pred             EEEecccchhHHHHHH------hccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccch
Confidence            9999999999999997      24567889999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCcc---ccccccccc--------cccccCCCcccHHHHHHHHhh-------cccccccccccccCCCCCCchHH
Q 045682          210 SISIPEGEL---LTGLRAFDL--------ARLNEDDGYVALRDHVKKYFE-------EDRLNEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~~---~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~  271 (309)
                      ++.+..+..   .+|+-|+..        -..+-+++.|-++..+|+.+.       +..-.+++-.+..|+..+.++ .
T Consensus       538 SR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~-n  616 (974)
T KOG4257|consen  538 SRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPP-N  616 (974)
T ss_pred             hhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCC-C
Confidence            999876642   345555432        223335677778888887743       233456777788888877665 8


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      |++.++.|+.+||.++|.+||++.+|...|.++..
T Consensus       617 CPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  617 CPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             CChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988765

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-37  Score=265.59  Aligned_cols=237  Identities=19%  Similarity=0.283  Sum_probs=192.5

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ...+.|+..++||.|..++||+|++  ++..||||++...+ ....+.+.+|+..++.++||||++++..|..+...|+|
T Consensus        23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence            3457899999999999999999999  88999999998764 34468899999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |.||.+||+.+.++..     -...+++..+..|++++++||.|||   .++.||||||+.||||+.+|.|||+|||.+-
T Consensus       103 mpfMa~GS~ldIik~~-----~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa  174 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTY-----YPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSA  174 (516)
T ss_pred             ehhhcCCcHHHHHHHH-----ccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeee
Confidence            9999999999999744     3445999999999999999999999   9999999999999999999999999999764


Q ss_pred             ccCCC--------cccccccccccccc-ccCCCcccHHHHHHHH-------------hhcccccccccccccCCCCCC--
Q 045682          212 SIPEG--------ELLTGLRAFDLARL-NEDDGYVALRDHVKKY-------------FEEDRLNEIIDPLIMGDRSCS--  267 (309)
Q Consensus       212 ~~~~~--------~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~--  267 (309)
                      ....+        ....|..++.+|+. ......+.+..++|++             |.......++-..+.+..|..  
T Consensus       175 ~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t  254 (516)
T KOG0582|consen  175 SLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLT  254 (516)
T ss_pred             eecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCccc
Confidence            33221        35578888888887 5444555566666655             223333444444455554422  


Q ss_pred             ------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          268 ------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       268 ------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                            .....+..+..++..||++||.+|||+++++.
T Consensus       255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                  22344677999999999999999999999974

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=7.9e-37  Score=248.30  Aligned_cols=228  Identities=16%  Similarity=0.199  Sum_probs=175.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ..|...+.||+|.||.||+|++  +|+.||||+++...  ........+||+.|+.++|+||+.++++|...+...||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            3577788999999999999999  89999999997753  3345668899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |++. +|+..++      .....++..++..++.++++|++|||   .+.|+||||||.|+|++++|.+||+|||+|+.+
T Consensus        82 fm~t-dLe~vIk------d~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f  151 (318)
T KOG0659|consen   82 FMPT-DLEVVIK------DKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFF  151 (318)
T ss_pred             eccc-cHHHHhc------ccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhcc
Confidence            9997 9999986      35677999999999999999999999   999999999999999999999999999999987


Q ss_pred             CCCc----------------cccccccccccccccCCCcccHHHHHHHHhhcccc-------------------------
Q 045682          214 PEGE----------------LLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRL-------------------------  252 (309)
Q Consensus       214 ~~~~----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  252 (309)
                      .+..                ++.|.+.|....     +.|+.+..+.+++.+..+                         
T Consensus       152 ~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~V-----DmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~W  226 (318)
T KOG0659|consen  152 GSPNRIQTHQVVTRWYRAPELLFGSRQYGTGV-----DMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQW  226 (318)
T ss_pred             CCCCcccccceeeeeccChHHhccchhcCCcc-----hhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccC
Confidence            5321                333333333222     455555555554222111                         


Q ss_pred             ---cccccccccCCCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          253 ---NEIIDPLIMGDRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       253 ---~~~~~~~~~g~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                         .++.|.......|.+.    -...+....+|+..+|.+||.+|+|+.|.+++
T Consensus       227 P~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  227 PEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             ccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence               1111111111112111    11345667999999999999999999998753

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-38  Score=264.95  Aligned_cols=226  Identities=19%  Similarity=0.249  Sum_probs=192.5

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ..++|+..++||+|+||+||.++.  +++.+|+|.+++..   ....+....|..+|.+++||+||+++-.|++....||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            346799999999999999999998  88999999997753   2345678899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |+||+.||.|.-+|+       +.+.+++..+.-++..|+.||.|||   +++||||||||+|||+|.+|+++|+|||++
T Consensus       103 Vld~~~GGeLf~hL~-------~eg~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~  172 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQ-------REGRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLC  172 (357)
T ss_pred             EEeccCCccHHHHHH-------hcCCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccc
Confidence            999999999999997       6788999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCC----CccccccccccccccccC------CCcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHH
Q 045682          211 ISIPE----GELLTGLRAFDLARLNED------DGYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       211 ~~~~~----~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      +..-.    ....+|+..|.+|+....      -++|+++..+++++.+.      ....+.+.+..+..+.. +.-.+.
T Consensus       173 k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~-p~~ls~  251 (357)
T KOG0598|consen  173 KEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP-PGYLSE  251 (357)
T ss_pred             hhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC-CccCCH
Confidence            85532    335689999999886553      35677777777775554      34556677777764333 225778


Q ss_pred             HHHHHHHHcccCCCCCCC
Q 045682          275 AYAHLIFECVNESPVDRP  292 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RP  292 (309)
                      +..+++...++.||++|.
T Consensus       252 ~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  252 EARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             HHHHHHHHHhccCHHHhc
Confidence            899999999999999996

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=3.4e-37  Score=264.67  Aligned_cols=230  Identities=27%  Similarity=0.374  Sum_probs=174.1

Q ss_pred             cCceeecCCeEEEEEEeC------CeEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .+.||.|.||.||+|.+.      +..|+||.+..... ...+.|.+|++.+.+++||||++++|++...+..++|+||+
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            567999999999999996      58899999966433 34688999999999999999999999999888899999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.++|...     ....+++.+++.|+.|||.||.|||   +.+++|+||+++||++++++.+||+|||++.....
T Consensus        84 ~~g~L~~~L~~~-----~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~  155 (259)
T PF07714_consen   84 PGGSLDDYLKSK-----NKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE  155 (259)
T ss_dssp             TTEBHHHHHHHT-----CTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred             cccccccccccc-----ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            999999999722     3567999999999999999999999   89999999999999999999999999999987632


Q ss_pred             Cc------ccccccccccccc------ccCCCcccHHHHHHHHhhcc-c-c-----cccccccccCCCCCCchHHHHHHH
Q 045682          216 GE------LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEED-R-L-----NEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       216 ~~------~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~-~-----~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ..      ...+...+.+|+.      ...++.|+++..+|+++... . .     .++......+.... .+..++..+
T Consensus       156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  234 (259)
T PF07714_consen  156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP-IPDNCPKDI  234 (259)
T ss_dssp             SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT-SBTTSBHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce-eccchhHHH
Confidence            21      1122223333322      22346677777777777632 1 1     22233333333322 233667889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      .+++.+||+.+|++|||+.+|++.|
T Consensus       235 ~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  235 YSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHhcC
Confidence            9999999999999999999999886

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-37  Score=273.29  Aligned_cols=232  Identities=19%  Similarity=0.259  Sum_probs=199.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ...|.....||+|+.|.||.|..  +++.||||++........+-+++|+.+|+..+|+|||++++.+..+++.|+||||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            34577778899999999999998  8899999999888767677799999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++|+|.+.+.        ...+++.++..|+.++++||+|||   ..+|+|||||.+|||++.+|.+||+|||++..+.
T Consensus       352 m~ggsLTDvVt--------~~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~  420 (550)
T KOG0578|consen  352 MEGGSLTDVVT--------KTRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS  420 (550)
T ss_pred             cCCCchhhhhh--------cccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence            99999999984        556999999999999999999999   9999999999999999999999999999998876


Q ss_pred             CCc----ccccccccccccccc------CCCcccHHHHHHHHhhcccc-------cccccccccCCCCCCchHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ...    ...|.++|.+++...      .-+.|+++..+++++++...       .++.--...|......+...+.++.
T Consensus       421 ~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~k  500 (550)
T KOG0578|consen  421 EEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELK  500 (550)
T ss_pred             cccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHH
Confidence            543    567888888877533      34678999999999776532       2222223335555566678889999


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +++.+||+.||.+||++.+|++
T Consensus       501 dFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  501 DFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             HHHHHHhhcchhcCCCHHHHhc
Confidence            9999999999999999999985

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.3e-37  Score=268.85  Aligned_cols=232  Identities=17%  Similarity=0.158  Sum_probs=174.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv  131 (309)
                      +.|+..+.||+|.||.||+|+.  +|+.||+|++...  .........+||.+|++|+||||++|.+...+.  +.+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            5578888999999999999999  8999999998665  356667788999999999999999999999876  789999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      +|||+. +|.-++.      ...-.+++.++..++.|++.||+|||   .++|+|||||.+|||||.+|++||+|||||+
T Consensus       197 FeYMdh-DL~GLl~------~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr  266 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLS------SPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLAR  266 (560)
T ss_pred             Eecccc-hhhhhhc------CCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEecccccee
Confidence            999997 9999875      24667999999999999999999999   9999999999999999999999999999999


Q ss_pred             ccCCCc--ccccccccc---ccccccC-------CCcccHHHHHHHHhhccccccc--------------------ccc-
Q 045682          212 SIPEGE--LLTGLRAFD---LARLNED-------DGYVALRDHVKKYFEEDRLNEI--------------------IDP-  258 (309)
Q Consensus       212 ~~~~~~--~~~g~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~--------------------~~~-  258 (309)
                      .+....  .+|.+.-..   .|+...+       -+.|+.+..+.++|.+..+..-                    .-+ 
T Consensus       267 ~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~  346 (560)
T KOG0600|consen  267 FYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPV  346 (560)
T ss_pred             eccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccc
Confidence            665433  222222211   1111112       2456666666666554332110                    000 


Q ss_pred             -cccCCC---CCCc--------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 -LIMGDR---SCSG--------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 -~~~g~~---~~~~--------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       .+.+..   +...        ....+....+|+..+|..||.+|.|+.++++
T Consensus       347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence             000000   0000        0122466888999999999999999998874

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-37  Score=273.20  Aligned_cols=240  Identities=17%  Similarity=0.225  Sum_probs=188.3

Q ss_pred             HhcCCCccCceeecCCeEEEEEEeCC-eEEEEEEecCCCchhH-HHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFCQE-RLISVMKFDASKPRMY-DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~~~~~~~-~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +.+.....++||+|-||.|..+...+ ..||||.++....... ..|.+|+++|.+|+||||+.|+|+|..++++++|+|
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E  615 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE  615 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence            44556668889999999999999955 9999999998765444 789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++|+|.+||..+..     ..+......+|+.|||.||+||.   +.++|||||.+.|||++.++++||+|||+++..
T Consensus       616 YmEnGDLnqFl~ahea-----pt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~l  687 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHEL-----PTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNL  687 (807)
T ss_pred             HHhcCcHHHHHHhccC-----cccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCccccccc
Confidence            9999999999975421     22455566789999999999999   999999999999999999999999999999966


Q ss_pred             CCCcc--ccc----------cccccccccccCCCcccHHHHHHHHhhc---ccccccccc------------cccCCCCC
Q 045682          214 PEGEL--LTG----------LRAFDLARLNEDDGYVALRDHVKKYFEE---DRLNEIIDP------------LIMGDRSC  266 (309)
Q Consensus       214 ~~~~~--~~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------------~~~g~~~~  266 (309)
                      -.++.  ..|          ...+.....+-.++.|.++.++|+.+..   .++.++-|.            .-....+.
T Consensus       688 ysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~  767 (807)
T KOG1094|consen  688 YSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLS  767 (807)
T ss_pred             ccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceecc
Confidence            44431  111          1222223344456889999999988542   222222221            11111222


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                       .|.-|+.+++++|.+||..+-.+|||+.+|..-|++.
T Consensus       768 -~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  768 -RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             -CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence             2347788999999999999999999999998887764

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3e-36  Score=259.70  Aligned_cols=237  Identities=15%  Similarity=0.226  Sum_probs=181.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .+|...+.||+|+||.||+|.+     .+..||+|.++... ......+.+|+..+.+++||||++++|++..++..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            4578888999999999999986     24789999987653 23346789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++..      ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.++++|||.+.
T Consensus        85 ~e~~~~~~L~~~l~~------~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~  155 (266)
T cd05064          85 TEYMSNGALDSFLRK------HEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ  155 (266)
T ss_pred             EEeCCCCcHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccc
Confidence            999999999999862      2357899999999999999999999   9999999999999999999999999999876


Q ss_pred             ccCCCccc-----cccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHH
Q 045682          212 SIPEGELL-----TGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       212 ~~~~~~~~-----~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      ........     .+...+.+|+..      ...+.|+++..+++++. +...      .+++.....+... +.+..++
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~  234 (266)
T cd05064         156 EDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL-PAPRNCP  234 (266)
T ss_pred             cccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-CCCCCCC
Confidence            54322211     111233334322      22355666666666442 2211      1222222223222 2334677


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      ..+.+++..||+.+|.+|||+.+|.+.|.++
T Consensus       235 ~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         235 NLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            8899999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-38  Score=273.02  Aligned_cols=232  Identities=18%  Similarity=0.240  Sum_probs=173.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchh-HHHHHHHHHHHhhcc-CCcceeeeeeeeeCC-ceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRM-YDCCINNIVYASQMI-HRCFFKLIGCCLETQ-IPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~-~~~lv~  132 (309)
                      ++|...+.||.|.||.||+|+-  ++..||||+++..--.. ...=++|++.|.+++ ||||+++.+++.+.. ..++||
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            4577788999999999999998  88999999997753221 122468999999997 999999999999877 899999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |||+. +|.+.++      .+...+++..+..|+.||++||+|+|   .+|+.|||+||+||||.....+||+|||+|+.
T Consensus        90 E~Md~-NLYqLmK------~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARe  159 (538)
T KOG0661|consen   90 EFMDC-NLYQLMK------DRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLARE  159 (538)
T ss_pred             Hhhhh-hHHHHHh------hcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccc
Confidence            99987 9999996      35788999999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCcccccccc---ccccccccCCCcccHHHHHHHH-------------hhccc-cccccc-----------ccccC--
Q 045682          213 IPEGELLTGLRA---FDLARLNEDDGYVALRDHVKKY-------------FEEDR-LNEIID-----------PLIMG--  262 (309)
Q Consensus       213 ~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~~~~~-----------~~~~g--  262 (309)
                      +....-.|....   |.+++....+.+++...++|.+             |++.+ ++++..           ....|  
T Consensus       160 v~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~  239 (538)
T KOG0661|consen  160 VRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN  239 (538)
T ss_pred             cccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence            765443332222   2233433334444444444433             22221 111100           00000  


Q ss_pred             -------CCCCCc-------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 -------DRSCSG-------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 -------~~~~~~-------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                             ..|...       -..++.+..+++.+|+++||.+|||+.|.++
T Consensus       240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence                   001000       1236788999999999999999999999875

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.6e-36  Score=273.90  Aligned_cols=248  Identities=16%  Similarity=0.249  Sum_probs=185.5

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeee
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCL  123 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  123 (309)
                      +....++|+..+.||+|+||.||+|.+       ++..||+|.++... ....+.+.+|+.++..+ +||||++++++|.
T Consensus        30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~  109 (375)
T cd05104          30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT  109 (375)
T ss_pred             cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence            344556788899999999999999974       34689999987543 33446789999999999 8999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCC-----------------------------------------------------
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNP-----------------------------------------------------  150 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------------------------  150 (309)
                      ..+..++||||+++|+|.+++......                                                     
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence            999999999999999999998532100                                                     


Q ss_pred             ---------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          151 ---------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       151 ---------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                                     ......+++..+..++.||+.||.|||   +.+++||||||+|||++.++.+||+|||+++....
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~  266 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRN  266 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence                           001235889999999999999999999   89999999999999999999999999999976643


Q ss_pred             Ccc--ccc----ccccccccc------ccCCCcccHHHHHHHHhh-ccc-cc------ccccccccCCCCCCchHHHHHH
Q 045682          216 GEL--LTG----LRAFDLARL------NEDDGYVALRDHVKKYFE-EDR-LN------EIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       216 ~~~--~~g----~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~-~~------~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      ...  ..|    ...+.+|+.      ....+.|+++..++.++. +.. +.      ........+. ....+...+.+
T Consensus       267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  345 (375)
T cd05104         267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY-RMLSPECAPSE  345 (375)
T ss_pred             cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCc-cCCCCCCCCHH
Confidence            321  111    122333432      223577788888887764 221 11      1111111121 11122244578


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      +.+|+..||+.||++|||+.+|++.|++.
T Consensus       346 l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         346 MYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            99999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-36  Score=263.32  Aligned_cols=233  Identities=21%  Similarity=0.265  Sum_probs=187.6

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--------------hhHHHHHHHHHHHhhccCCcceee
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--------------RMYDCCINNIVYASQMIHRCFFKL  118 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l  118 (309)
                      ...++|+....||+|.||.|-+|..  +++.||||++.+...              ...+...+||.+|++++|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            3457899999999999999999998  889999999865321              122478899999999999999999


Q ss_pred             eeeeee--CCceEEEEEeccCCChhhhhhhhCCCCCCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCee
Q 045682          119 IGCCLE--TQIPILVFEYINCGSLADRIRIQHNPQPQHEP-LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL  195 (309)
Q Consensus       119 ~g~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~-l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nil  195 (309)
                      +.+..+  ....|||+|||..|.+...=        ...+ ++..++++|+.+++.||.|||   ..+||||||||+|+|
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p--------~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLL  242 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCP--------PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLL  242 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCC--------CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheE
Confidence            999976  45799999999999887652        3344 999999999999999999999   999999999999999


Q ss_pred             ecCCCcEEEeecccccccCCC---------ccccccccccccccccCCC---cccHHHHHHHH-------------hhcc
Q 045682          196 FNEENVAKLFDFSFSISIPEG---------ELLTGLRAFDLARLNEDDG---YVALRDHVKKY-------------FEED  250 (309)
Q Consensus       196 l~~~~~~kl~Dfg~a~~~~~~---------~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~-------------~~~~  250 (309)
                      |+++|+|||+|||.+...+.+         ..+.|.++|.+|+......   +.....++|.+             |-+.
T Consensus       243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~  322 (576)
T KOG0585|consen  243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD  322 (576)
T ss_pred             EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence            999999999999998866322         1467899999988766522   23344444443             2233


Q ss_pred             cccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          251 RLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       251 ~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      ...++.+.+......++...+..+.+.+||.++|.+||+.|.+..+|.
T Consensus       323 ~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik  370 (576)
T KOG0585|consen  323 FELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIK  370 (576)
T ss_pred             hHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhe
Confidence            345666776666666655556788999999999999999999998875

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=5e-36  Score=263.23  Aligned_cols=243  Identities=16%  Similarity=0.217  Sum_probs=177.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe------------------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCccee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC------------------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFK  117 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~------------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~  117 (309)
                      .++|...+.||+|+||.||+|.+                  ++..||+|.+.... ......|.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            35688888999999999999985                  12469999987653 233467999999999999999999


Q ss_pred             eeeeeeeCCceEEEEEeccCCChhhhhhhhCCC------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 045682          118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNP------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVI  185 (309)
Q Consensus       118 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ii  185 (309)
                      +++++.+.+..++||||+++|+|.+++......            ......+++..++.++.||+.||.|||   +.+|+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~iv  160 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFV  160 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCcc
Confidence            999999999999999999999999998532211            112245788999999999999999999   89999


Q ss_pred             eCCCCCCCeeecCCCcEEEeecccccccCCCcc--ccc----ccccccccc------ccCCCcccHHHHHHHHhhc---c
Q 045682          186 FRDFKLSNILFNEENVAKLFDFSFSISIPEGEL--LTG----LRAFDLARL------NEDDGYVALRDHVKKYFEE---D  250 (309)
Q Consensus       186 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~g----~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~  250 (309)
                      ||||||+|||++.++.+||+|||+++.......  .++    ...+.+|+.      ....+.|+++..++.++..   .
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~  240 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ  240 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence            999999999999999999999999976533221  111    223333332      1234566777666665421   1


Q ss_pred             cccc-----ccccc---cc---CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          251 RLNE-----IIDPL---IM---GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       251 ~~~~-----~~~~~---~~---g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      .+..     ++...   ..   .......+..++..+.+|+.+||+.+|++|||+.+|.+.|+
T Consensus       241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         241 PYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            1111     11100   00   00000111245578999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.9e-35  Score=254.52  Aligned_cols=242  Identities=19%  Similarity=0.255  Sum_probs=189.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|..  +++.||+|.+...   .......+.+|+.+++.++||||+++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4688899999999999999998  7899999987543   2233456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++....   .....+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++..
T Consensus        82 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~  155 (267)
T cd08228          82 ELADAGDLSQMIKYFK---KQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRF  155 (267)
T ss_pred             EecCCCcHHHHHHHhh---hccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECcccccee
Confidence            9999999999875321   12456889999999999999999999   99999999999999999999999999999887


Q ss_pred             cCCCc----ccccccccccccccc------CCCcccHHHHHHHHhhcccc--------cccccccccCCCCCCchHHHHH
Q 045682          213 IPEGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL--------NEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      .....    ...|...+.+|+...      ..+.|+++..+|.++.+...        ..+.+....+..+.......+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T cd08228         156 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSE  235 (267)
T ss_pred             ccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCH
Confidence            64432    223444444444322      23566777777777654322        1222333333444444446678


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      .+.+++.+||+.+|++||++.+|++.|+++.
T Consensus       236 ~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         236 KLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            8999999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.7e-35  Score=263.00  Aligned_cols=234  Identities=13%  Similarity=0.158  Sum_probs=179.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|+..+.||+|+||.||++.+  ++..+|+|.+.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            36788899999999999999999  68889999987653 3345679999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |+++|+|.+++.       ....+++..+..++.|++.||.|||   +. +|+||||||+|||++.++.+||+|||++..
T Consensus        84 ~~~~~~L~~~l~-------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  153 (331)
T cd06649          84 HMDGGSLDQVLK-------EAKRIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  153 (331)
T ss_pred             cCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccc
Confidence            999999999986       4456899999999999999999999   64 699999999999999999999999999876


Q ss_pred             cCCCc--ccccccccccccccc------CCCcccHHHHHHHHhhcccccc---------ccc------------------
Q 045682          213 IPEGE--LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE---------IID------------------  257 (309)
Q Consensus       213 ~~~~~--~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~------------------  257 (309)
                      .....  ...|...|.+|+...      ..+.|+++..++.++.+.....         ++.                  
T Consensus       154 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (331)
T cd06649         154 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRP  233 (331)
T ss_pred             ccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccc
Confidence            54322  234555555555432      2355666666666654432110         000                  


Q ss_pred             -------------------------ccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          258 -------------------------PLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       258 -------------------------~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                                               ....+..+..+....+.++.+|+.+||+.||++|||+.+|++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                                     0000011111112356789999999999999999999999753

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-36  Score=273.73  Aligned_cols=230  Identities=18%  Similarity=0.216  Sum_probs=202.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      +-|..++.||.|+.|.|..|++  +|+.+|||.+....   ......+.+|+.+|+.+.||||+++|+++.+...+|+|.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            4578899999999999999999  99999999987652   233456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|-|+++|-       ..+++++..+.+++.||+.|+.|||   ..+|+||||||+|+|+|..+++||+|||+|..
T Consensus        92 Eyv~gGELFdylv-------~kG~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsL  161 (786)
T KOG0588|consen   92 EYVPGGELFDYLV-------RKGPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASL  161 (786)
T ss_pred             EecCCchhHHHHH-------hhCCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeec
Confidence            9999999999997       6789999999999999999999999   99999999999999999999999999999988


Q ss_pred             cCCCc---cccccccccccccccCCCcccHHHHHHHH-------------hhcccccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNEDDGYVALRDHVKKY-------------FEEDRLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      -.++.   ..+|.+.|..|+.-.+..+.....++|..             |++.++..++..+..|.+..  |...+.+.
T Consensus       162 e~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~M--Ps~Is~ea  239 (786)
T KOG0588|consen  162 EVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEM--PSNISSEA  239 (786)
T ss_pred             ccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccC--CCcCCHHH
Confidence            77664   56788888888887776666666666654             66667777788888887653  35778999


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+|+..||+.|.|+.+|++
T Consensus       240 QdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  240 QDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             HHHHHHHhccCccccccHHHHhh
Confidence            99999999999999999999975

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1e-35  Score=268.42  Aligned_cols=250  Identities=17%  Similarity=0.261  Sum_probs=186.3

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe--C-----CeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeee
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC--Q-----ERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCL  123 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  123 (309)
                      |....++|+..+.||+|+||.||+|.+  .     +..||+|.+.... ......+.+|+.+++.+ +||||++++++|.
T Consensus        33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~  112 (374)
T cd05106          33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT  112 (374)
T ss_pred             ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence            344556799999999999999999986  2     2579999997643 33346688999999999 8999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCC------------------------------------------------------
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHN------------------------------------------------------  149 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------  149 (309)
                      ..+..++||||+++|+|.+++.....                                                      
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence            99999999999999999999853210                                                      


Q ss_pred             ---------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc--c
Q 045682          150 ---------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE--L  218 (309)
Q Consensus       150 ---------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~  218 (309)
                               ......++++..+++++.||+.||.|||   +.+++||||||+|||++.++.+||+|||+++......  .
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~  269 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV  269 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence                     0011235888999999999999999999   9999999999999999999999999999987654322  1


Q ss_pred             cc----cccccccccc------ccCCCcccHHHHHHHHhh-ccccc-cc-----ccccccCCCCCCchHHHHHHHHHHHH
Q 045682          219 LT----GLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRLN-EI-----IDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       219 ~~----g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~-~~-----~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                      ..    +...+.+|+.      ....+.|+++..++.++. +.... ..     +............+...+.++.+++.
T Consensus       270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  349 (374)
T cd05106         270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMK  349 (374)
T ss_pred             eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHH
Confidence            11    1122334432      223567788888887764 33211 11     11111111111122234578999999


Q ss_pred             HcccCCCCCCCCHHHHHHHHHHHH
Q 045682          282 ECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      +||+.||.+|||+.+|++.|+++.
T Consensus       350 ~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         350 MCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHcCCChhhCcCHHHHHHHHHHHh
Confidence            999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.5e-37  Score=261.64  Aligned_cols=229  Identities=19%  Similarity=0.262  Sum_probs=187.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ..|+..+.||+|.||.|-+|..  .|+.||||.+....   .++.-.+.+||+||..|+||||+.+|.+|...+...|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            4577788999999999999987  89999999997764   344556889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||..+|.|.+|+.       ..+.+++..+..++.||++|+.|||   .++++|||||.+|||+|.++++||+|||++..
T Consensus       133 EYaS~GeLYDYiS-------er~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNl  202 (668)
T KOG0611|consen  133 EYASGGELYDYIS-------ERGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNL  202 (668)
T ss_pred             EecCCccHHHHHH-------HhccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhh
Confidence            9999999999997       7788999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc---cccccccccccccccCC-------CcccHHHHHHHH------hhcccccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNEDD-------GYVALRDHVKKY------FEEDRLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      +....   .++|.+-|..++..-+.       +.|+++...+.+      |++.....++.++..|.+.-+   ..+...
T Consensus       203 y~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP---~~PSdA  279 (668)
T KOG0611|consen  203 YADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP---ETPSDA  279 (668)
T ss_pred             hccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC---CCCchH
Confidence            76554   34455544444433222       456666555544      444444556777777766432   223556


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..||+++|-.||+.|-|+.+|..
T Consensus       280 ~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  280 SGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             HHHHHHHHhcCcccchhHHHHhh
Confidence            78999999999999999999864

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=6.1e-36  Score=256.72  Aligned_cols=241  Identities=19%  Similarity=0.297  Sum_probs=187.1

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .+..+|+..+.||.|+||.||+|.+ .+..+++|.+..........+.+|+.+++.++||||+++++++......++|||
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            3445688889999999999999999 778899999887665556789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++..     .....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++...
T Consensus        83 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~  154 (261)
T cd05148          83 LMEKGSLLAFLRS-----PEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLI  154 (261)
T ss_pred             ecccCCHHHHHhc-----CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhc
Confidence            9999999999862     13456899999999999999999999   899999999999999999999999999999766


Q ss_pred             CCCcccc----cccccccccc------ccCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHH
Q 045682          214 PEGELLT----GLRAFDLARL------NEDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       214 ~~~~~~~----g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      .......    +...+..|+.      ....+.|+++..++.++. +..      ..+.+.....+.. .+.+..++..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  233 (261)
T cd05148         155 KEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR-MPCPAKCPQEI  233 (261)
T ss_pred             CCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc-CCCCCCCCHHH
Confidence            4332111    1112222322      122356666666666654 221      1223333333322 22233667889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .+++.+||+.+|.+|||+.+|.+.|+.+
T Consensus       234 ~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         234 YKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            9999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.4e-35  Score=268.99  Aligned_cols=251  Identities=13%  Similarity=0.211  Sum_probs=187.2

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhcc-CCcceeeeeeee
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMI-HRCFFKLIGCCL  123 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~  123 (309)
                      +....+.|..++.||+|+||.||+|++.       +..||||++.... ......+.+|+.++.++. ||||++++|++.
T Consensus        32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~  111 (400)
T cd05105          32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT  111 (400)
T ss_pred             eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            3445678889999999999999999862       2469999997543 233467999999999995 999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCC-----------------------------------------------------
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNP-----------------------------------------------------  150 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------------------------  150 (309)
                      +.+..++||||+++|+|.++|......                                                     
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM  191 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence            999999999999999999998542100                                                     


Q ss_pred             ------------------------------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          151 ------------------------------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       151 ------------------------------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                                                          ......+++..++.++.|++.||.|||   +.+++|+||||+||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Ni  268 (400)
T cd05105         192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNV  268 (400)
T ss_pred             hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhE
Confidence                                                001235888999999999999999999   89999999999999


Q ss_pred             eecCCCcEEEeecccccccCCCcc------ccccccccccccc------cCCCcccHHHHHHHHhh-cc-cccc-----c
Q 045682          195 LFNEENVAKLFDFSFSISIPEGEL------LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-ED-RLNE-----I  255 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~~~~~~------~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~-~~~~-----~  255 (309)
                      |++.++.+||+|||+++.......      ..+...+.+++..      ...+.|+++..++.++. +. .+..     .
T Consensus       269 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~  348 (400)
T cd05105         269 LLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST  348 (400)
T ss_pred             EEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence            999999999999999876533211      1122234344422      23466777777777653 22 2111     1


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      +............+...+.++.+++.+||+.+|++|||+.+|.+.|+.+.+
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         349 FYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            111111222222233567889999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-36  Score=269.56  Aligned_cols=239  Identities=18%  Similarity=0.248  Sum_probs=200.1

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      +.|+.+.+..+..+-||.|+.|.||.|++.++.||||+++..+       ..+|+-|++|+||||+.+.|+|....-++|
T Consensus       117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCI  189 (904)
T KOG4721|consen  117 ELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCI  189 (904)
T ss_pred             hhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEE
Confidence            3455566666677889999999999999999999999976543       246888999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |||||+.|-|...|+       ...++.......+..+||.||.|||   .+.|||||||.-||||+.+..|||+|||-+
T Consensus       190 iMEfCa~GqL~~VLk-------a~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS  259 (904)
T KOG4721|consen  190 IMEFCAQGQLYEVLK-------AGRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTS  259 (904)
T ss_pred             eeeccccccHHHHHh-------ccCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccch
Confidence            999999999999998       7788999999999999999999999   999999999999999999999999999988


Q ss_pred             cccCCC---ccccccccccccccccC------CCcccHHHHHHHHhhcccccc------cccccccCCCCCCchHHHHHH
Q 045682          211 ISIPEG---ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       211 ~~~~~~---~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      +....-   ..+.|..++.+++....      -+.|+++...|+++.+.....      ++--+-......+.|..|++-
T Consensus       260 ~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~G  339 (904)
T KOG4721|consen  260 KELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDG  339 (904)
T ss_pred             HhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchH
Confidence            766432   35778888888876543      367899999999976654322      222222233344566789999


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ++-|+++||+..|..||+|++|+.-|+-...
T Consensus       340 fklL~Kqcw~sKpRNRPSFrqil~HldIa~p  370 (904)
T KOG4721|consen  340 FKLLLKQCWNSKPRNRPSFRQILLHLDIASP  370 (904)
T ss_pred             HHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence            9999999999999999999999998876543

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-36  Score=244.06  Aligned_cols=232  Identities=20%  Similarity=0.282  Sum_probs=186.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+.++.||+|.||.||.|+.  ++-.||+|.+-...   .....++.+|+++-+.|+||||.++|+++.+....||++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            5688899999999999999999  67889999986543   344577999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||.++|+|...|..     .....+++.....++.|+|.|+.|+|   .+++|||||||+|+|++..+..||+|||.+..
T Consensus       102 Eya~~gel~k~L~~-----~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~  173 (281)
T KOG0580|consen  102 EYAPRGELYKDLQE-----GRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVH  173 (281)
T ss_pred             EecCCchHHHHHHh-----cccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence            99999999999862     24566888888999999999999999   99999999999999999999999999999988


Q ss_pred             cCCC--ccccccccccccccccCCCcc------cHHHHHHHH------hhcccccccccccccCCCCCCchHHHHHHHHH
Q 045682          213 IPEG--ELLTGLRAFDLARLNEDDGYV------ALRDHVKKY------FEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       213 ~~~~--~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      .+.+  ..++|+.-+..++...+.+..      .+...-.++      |+.....+....+..-+...+  ...+....+
T Consensus       174 ~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p--~~is~~a~d  251 (281)
T KOG0580|consen  174 APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP--STISGGAAD  251 (281)
T ss_pred             cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC--cccChhHHH
Confidence            7654  478888888877776554332      222222333      333333333333333333222  466788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +|..|+..+|.+|.+..|+++
T Consensus       252 lI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  252 LISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             HHHHHhccCccccccHHHHhh
Confidence            999999999999999999875

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.1e-35  Score=261.45  Aligned_cols=233  Identities=13%  Similarity=0.166  Sum_probs=176.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|+..+.||+|+||.||++.+  ++..+|+|.+... .......+.+|++++++++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            46788999999999999999999  6788999988764 33345678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |+++|+|.+++.       ....+++..+..++.|++.||.|||   + .+++|+||||+|||++.++.+||+|||++..
T Consensus        84 ~~~~~~L~~~l~-------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~  153 (333)
T cd06650          84 HMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  153 (333)
T ss_pred             cCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchh
Confidence            999999999986       4456899999999999999999999   6 4799999999999999999999999999876


Q ss_pred             cCCC--ccccccccccccccccC------CCcccHHHHHHHHhhcccccc---------ccc------------------
Q 045682          213 IPEG--ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNE---------IID------------------  257 (309)
Q Consensus       213 ~~~~--~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~------------------  257 (309)
                      ....  ....|...|.+++....      .+.|+++..++.++.+.....         .+.                  
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (333)
T cd06650         154 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP  233 (333)
T ss_pred             hhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence            5322  22345555655554332      345555555555544321100         000                  


Q ss_pred             -----------------------ccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 -----------------------PLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 -----------------------~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                             .......+.......+.++.+|+.+||+.||++|||+.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence                                   000000000011123467899999999999999999999964

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.1e-34  Score=249.57  Aligned_cols=242  Identities=19%  Similarity=0.264  Sum_probs=191.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|..  +++.||+|.+...   .......+.+|++++.+++|+||+++++++...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            5788899999999999999999  7899999988642   2233567899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++....   .....+++.+++.++.+++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..
T Consensus        82 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~  155 (267)
T cd08224          82 ELADAGDLSRMIKHFK---KQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRF  155 (267)
T ss_pred             ecCCCCCHHHHHHHhc---ccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeee
Confidence            9999999999985321   23456899999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCCc----cccccccccccccc------cCCCcccHHHHHHHHhhccccc--------ccccccccCCCCCCchHHHHH
Q 045682          213 IPEGE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN--------EIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      .....    ...+...+.+++..      ...+.|+++..+|.++.+....        +..+....+..+..+....+.
T Consensus       156 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T cd08224         156 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSE  235 (267)
T ss_pred             ccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCH
Confidence            54321    22344444444432      1346677777777776543221        223333334444333336677


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      .+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus       236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         236 ELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            8999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=2.9e-35  Score=259.81  Aligned_cols=238  Identities=18%  Similarity=0.275  Sum_probs=180.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe----EEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER----LISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .+|+..+.||+|+||.||+|.+  ++.    .||+|.+.... ......+.+|+.+++.++||||++++|+|... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            4588899999999999999987  443    48999987543 34556799999999999999999999999875 5789


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ++||+++|+|.+++..      ....+++..++.++.||+.||+|||   +.+++||||||+|||++.++.+||+|||++
T Consensus        86 v~e~~~~g~l~~~l~~------~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a  156 (316)
T cd05108          86 ITQLMPFGCLLDYVRE------HKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLA  156 (316)
T ss_pred             eeecCCCCCHHHHHHh------ccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEcccccc
Confidence            9999999999999862      2346889999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCccc---c-c--cccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          211 ISIPEGELL---T-G--LRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~~~---~-g--~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      +........   . +  ...+.+++..      ...+.|+++..+|+++. +...      .++......+.. .+.+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~  235 (316)
T cd05108         157 KLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI  235 (316)
T ss_pred             ccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCC-CCCCCC
Confidence            876543211   1 1  1123333322      23467777777777653 2211      111111112222 222234


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ++..+.+++..||+.+|.+|||+.+++..|..+..
T Consensus       236 ~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         236 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence            56789999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=4.4e-35  Score=250.87  Aligned_cols=233  Identities=16%  Similarity=0.255  Sum_probs=179.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      ++|+..+.||+|+||.||++.+ ++..+|+|.+.... .....+.+|+.+++.++||||+++++++..++..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            3477788899999999999999 66789999876543 334678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++......
T Consensus        83 ~~~L~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05114          83 NGCLLNYLRQ------RQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD  153 (256)
T ss_pred             CCcHHHHHHh------CccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence            9999999851      2346899999999999999999999   999999999999999999999999999998865433


Q ss_pred             cccc-----ccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHHH
Q 045682          217 ELLT-----GLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       217 ~~~~-----g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ....     +...+.+|+..      ...+.|+++..++.++. +...      .+.+.....+..+.. +...+.++.+
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~  232 (256)
T cd05114         154 EYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR-PKLASMTVYE  232 (256)
T ss_pred             ceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCHHHHH
Confidence            2211     11223334332      23456666766666665 3221      123333333332221 2245577999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      ++.+||+.+|.+|||+.++++.|
T Consensus       233 li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         233 VMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHccCCcccCcCHHHHHHhh
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.4e-35  Score=252.30  Aligned_cols=239  Identities=18%  Similarity=0.265  Sum_probs=184.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ..++|+..+.||+|++|.||+|.+ .+..||+|.+.... ...+.+.+|+.++++++||||+++++++...+..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            346688889999999999999998 66789999987643 3356789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++...     ....+++..+..++.|++.|+.|||   +.+++|+||||+||+++.++.+||+|||++....
T Consensus        83 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068          83 MKYGSLLEYLQGG-----AGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIK  154 (261)
T ss_pred             ccCCcHHHHHhcc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence            9999999998621     2346899999999999999999999   8999999999999999999999999999998764


Q ss_pred             CCcc--cccc---cccccccc------ccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHH
Q 045682          215 EGEL--LTGL---RAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       215 ~~~~--~~g~---~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....  ..|.   ..+.+|+.      ....+.|+++..++.++. +...      .........+ .....+...+..+
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  233 (261)
T cd05068         155 EDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRMPCPPGCPKEL  233 (261)
T ss_pred             CCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCcCCHHH
Confidence            3221  1111   12333332      223466777777777664 2211      1122222222 1122223566889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .+++.+||+.+|.+||++.+|++.|+++
T Consensus       234 ~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         234 YDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             HHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            9999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=7.1e-35  Score=250.97  Aligned_cols=237  Identities=19%  Similarity=0.278  Sum_probs=182.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--C---CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--Q---ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|+..+.||+|+||.||+|.+  +   ...||+|.+.... ......|.+|+.++..++||||+++++++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            5688899999999999999998  2   3579999987643 33446789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++..      ....+++..++.++.|++.||+|||   +.+++|+||+|+||++++++.++|+|||++.
T Consensus        84 ~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~  154 (266)
T cd05033          84 TEYMENGSLDKFLRE------NDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (266)
T ss_pred             EEcCCCCCHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhh
Confidence            999999999999862      2347899999999999999999999   9999999999999999999999999999998


Q ss_pred             ccCC--Ccccc--cc--cccccccc------ccCCCcccHHHHHHHHhh-cc-cc-----cccccccccCCCCCCchHHH
Q 045682          212 SIPE--GELLT--GL--RAFDLARL------NEDDGYVALRDHVKKYFE-ED-RL-----NEIIDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       212 ~~~~--~~~~~--g~--~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~-~~-----~~~~~~~~~g~~~~~~~~~~  272 (309)
                      ....  ....+  +.  ..+.+++.      ....+.|+++..++.++. +. .+     .++.+....+... +.+..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~  233 (266)
T cd05033         155 RLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL-PPPMDC  233 (266)
T ss_pred             cccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC-CCCCCC
Confidence            7642  11111  11  12223332      123456777777666543 22 11     1222222222221 222356


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      +..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       234 ~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         234 PSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            78899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.1e-35  Score=250.38  Aligned_cols=237  Identities=19%  Similarity=0.298  Sum_probs=182.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      .++|+..+.||.|+||.||+|...++.||+|.+..... ..+++.+|+.++..++|+||+++++++.+....++||||++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            35678889999999999999999999999999977653 46789999999999999999999999999899999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +++|.+++...     ....+++..+..++.|++.||.|||   ..+++|+||||+||+++.++.+||+|||+++.....
T Consensus        84 ~~~L~~~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~  155 (256)
T cd05039          84 KGSLVDYLRSR-----GRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG  155 (256)
T ss_pred             CCcHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccc
Confidence            99999998621     2236999999999999999999999   999999999999999999999999999999876432


Q ss_pred             cccccc--cccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ELLTGL--RAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ~~~~g~--~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                      .. .+.  ..+.+++...      ..+.|+++..++.++. +..      ..++......+. ....+...++++.+++.
T Consensus       156 ~~-~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~  233 (256)
T cd05039         156 QD-SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-RMEAPEGCPPEVYKVMK  233 (256)
T ss_pred             cc-cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-CCCCccCCCHHHHHHHH
Confidence            21 222  2233333221      2345555555555543 211      111111111111 11222345688999999


Q ss_pred             HcccCCCCCCCCHHHHHHHHHHH
Q 045682          282 ECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      +||+.+|++|||+.+++++|+.+
T Consensus       234 ~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         234 DCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHhccChhhCcCHHHHHHHHhcC
Confidence            99999999999999999999753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=3.5e-35  Score=252.54  Aligned_cols=237  Identities=16%  Similarity=0.237  Sum_probs=184.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .+|+..+.||+|+||.||+|.+  ++..||+|.+.... .....+.+|+.++..++||||+++++++..++..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            4577788999999999999998  67899999987543 34567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++...     ....+++..++.++.|++.||+|||   +.+++|+||||+||++++++.+||+|||++.....
T Consensus        85 ~~~~L~~~~~~~-----~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052          85 TYGNLLDYLREC-----NRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             CCCcHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence            999999998521     2456899999999999999999999   89999999999999999999999999999887654


Q ss_pred             Ccccc-----ccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHH
Q 045682          216 GELLT-----GLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       216 ~~~~~-----g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      .....     +...+.+|+..      ...+.|+++..+++++. +...      .+.......+ .....+...+.++.
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  235 (263)
T cd05052         157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YRMERPEGCPPKVY  235 (263)
T ss_pred             ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHH
Confidence            32111     11123333321      23466777777777764 3221      1122222222 12222335668899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      +++.+||+.+|++|||+.+++++|+++
T Consensus       236 ~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         236 ELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.9e-35  Score=254.33  Aligned_cols=238  Identities=20%  Similarity=0.263  Sum_probs=178.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~  129 (309)
                      .+|...+.||+|+||.||++.+      ++..||+|.+........+.+.+|+.++..++||||+++++++..  ....+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4677788999999999999974      468899999887766666789999999999999999999998754  34688


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|+|.+++..      ....+++..++.++.|++.||+|||   ..+++|+||||+||+++.++.+||+|||+
T Consensus        84 lv~e~~~~~~L~~~l~~------~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~  154 (284)
T cd05081          84 LVMEYLPYGSLRDYLQK------HRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGL  154 (284)
T ss_pred             EEEEecCCCCHHHHHHh------cCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcc
Confidence            99999999999999851      2346899999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCccc-----cc--cccccccccc------cCCCcccHHHHHHHHhhcccc-----cccc---cc----------
Q 045682          210 SISIPEGELL-----TG--LRAFDLARLN------EDDGYVALRDHVKKYFEEDRL-----NEII---DP----------  258 (309)
Q Consensus       210 a~~~~~~~~~-----~g--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~----------  258 (309)
                      +.........     .+  ...+.+|+..      ...+.|+++..+++++.....     ....   ..          
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd05081         155 TKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH  234 (284)
T ss_pred             cccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH
Confidence            9876443210     11  1112233321      123556666666666542111     0000   00          


Q ss_pred             ---cccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          259 ---LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       259 ---~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                         ........+.+...+.++.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         235 LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence               0011111112234567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=6e-35  Score=252.74  Aligned_cols=226  Identities=17%  Similarity=0.221  Sum_probs=168.5

Q ss_pred             ceeecCCeEEEEEEe--C------------------------CeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceee
Q 045682           65 VIMKRSFYTLYKGFC--Q------------------------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKL  118 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~--~------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l  118 (309)
                      +||+|+||.||+|.+  +                        ...|++|.+..........+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            699999999999985  1                        14588998876554555678899999999999999999


Q ss_pred             eeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC
Q 045682          119 IGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE  198 (309)
Q Consensus       119 ~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~  198 (309)
                      ++++.+++..++||||+++|+|..++..      ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~  152 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK------EKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLAR  152 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEec
Confidence            9999999999999999999999999851      3456899999999999999999999   899999999999999976


Q ss_pred             CC-------cEEEeecccccccCCCccccccccccccccccC-------CCcccHHHHHHHHh-hccccccccc-----c
Q 045682          199 EN-------VAKLFDFSFSISIPEGELLTGLRAFDLARLNED-------DGYVALRDHVKKYF-EEDRLNEIID-----P  258 (309)
Q Consensus       199 ~~-------~~kl~Dfg~a~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~-----~  258 (309)
                      ++       .+|++|||++..........+..++.+++....       .+.|+++..+|+++ .+........     .
T Consensus       153 ~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~  232 (274)
T cd05076         153 LGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER  232 (274)
T ss_pred             cCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence            54       389999999876544444445566666653322       34455555555542 2221110000     0


Q ss_pred             cccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          259 LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       259 ~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      .......  .+......+.+++.+||+.+|++|||+.+|++.|
T Consensus       233 ~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         233 FYEKKHR--LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHhccC--CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            0011111  1112235789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-35  Score=272.18  Aligned_cols=245  Identities=20%  Similarity=0.266  Sum_probs=190.6

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-CC-eEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeee-ee------C
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-QE-RLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCC-LE------T  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~-~~------~  125 (309)
                      ...++.+.++|.+|||+.||.|.. .+ ..+|+|++-..+....+.+.+||.+|+.| .|+|||.+++.. ..      .
T Consensus        35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~  114 (738)
T KOG1989|consen   35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV  114 (738)
T ss_pred             CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence            345577788999999999999999 44 89999998887777788899999999999 599999999933 21      2


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      -+++|+||||.+|+|-++|..-     -...|++.++++|+.|+|+|+++||.. ..+|||||||-+||||+.+|+.|||
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~R-----lq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLC  188 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTR-----LQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLC  188 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHH-----HhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeC
Confidence            3688999999999999999522     234499999999999999999999954 6679999999999999999999999


Q ss_pred             ecccccccCCC------------cccccccc-cccccc---------ccCCCcccHHHHHHHH-hhccccccc-cccccc
Q 045682          206 DFSFSISIPEG------------ELLTGLRA-FDLARL---------NEDDGYVALRDHVKKY-FEEDRLNEI-IDPLIM  261 (309)
Q Consensus       206 Dfg~a~~~~~~------------~~~~g~~~-~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~  261 (309)
                      |||.+......            ++.+...| |..|+.         .+..+.|.++..++.+ |....+.+- --+++.
T Consensus       189 DFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIln  268 (738)
T KOG1989|consen  189 DFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILN  268 (738)
T ss_pred             cccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEe
Confidence            99987643211            12222211 122221         1122444444444433 344455555 567788


Q ss_pred             CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          262 GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       262 g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      |.+..++.+.++..+.+||..||++||.+||++-||+..+..|..
T Consensus       269 g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  269 GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence            888888877999999999999999999999999999999888764

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=3.3e-35  Score=260.93  Aligned_cols=229  Identities=13%  Similarity=0.212  Sum_probs=183.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.++.+++||||+++++++.+++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            5688889999999999999999  68999999986532   233466889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        98 e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~  167 (329)
T PTZ00263         98 EFVVGGELFTHLR-------KAGRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKK  167 (329)
T ss_pred             cCCCCChHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceE
Confidence            9999999999986       4567899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc-ccccccccccccc------ccCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHH
Q 045682          213 IPEGE-LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       213 ~~~~~-~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..... ...|...|.+|+.      ....+.|+++..++.++.+...      .+....+..+....  +...+..+.+|
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~l  245 (329)
T PTZ00263        168 VPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKF--PNWFDGRARDL  245 (329)
T ss_pred             cCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCC--CCCCCHHHHHH
Confidence            65433 3345555555553      2245788888888888655432      12223333343322  22345778999


Q ss_pred             HHHcccCCCCCCCC-----HHHHH
Q 045682          280 IFECVNESPVDRPT-----MVDVA  298 (309)
Q Consensus       280 i~~Cl~~~P~~RPt-----~~~l~  298 (309)
                      +..||+.||.+||+     +.+++
T Consensus       246 i~~~L~~dP~~R~~~~~~~~~~ll  269 (329)
T PTZ00263        246 VKGLLQTDHTKRLGTLKGGVADVK  269 (329)
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHh
Confidence            99999999999997     56665

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=5.9e-35  Score=253.63  Aligned_cols=242  Identities=20%  Similarity=0.264  Sum_probs=184.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CC-----eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QE-----RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++|+..+.||+|+||.||+|..  .+     ..|++|.+.... ......|.+|+.++..++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            3577888999999999999987  22     579999987553 234466899999999999999999999999989999


Q ss_pred             EEEEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC
Q 045682          130 LVFEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN  200 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~  200 (309)
                      ++|||+++|+|.+++......         ......+++..++.++.|++.||.|||   +.+++|+||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence            999999999999998643210         011256889999999999999999999   99999999999999999999


Q ss_pred             cEEEeecccccccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhh-cccc------ccccccccc
Q 045682          201 VAKLFDFSFSISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIM  261 (309)
Q Consensus       201 ~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~  261 (309)
                      .+||+|||++.......      ...+...+.+|+..      ...+.|+++..+++++. +...      .++...+..
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~  241 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS  241 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            99999999987653322      11122234444432      22466777777777663 3211      233333333


Q ss_pred             CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          262 GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       262 g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      +..+ ..+..++.++.+|+.+||+.||.+||++.+|++.|++
T Consensus       242 ~~~~-~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         242 RQLL-PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CCcC-CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            3322 2234677899999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1.3e-34  Score=249.28  Aligned_cols=242  Identities=19%  Similarity=0.238  Sum_probs=188.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||.|+||.||+|..  ++..++||.+....   ......+.+|+.+++.++||||+++++++..++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4577788999999999999997  88999999876532   233467889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++....   .....+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..
T Consensus        82 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~  155 (267)
T cd08229          82 ELADAGDLSRMIKHFK---KQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRF  155 (267)
T ss_pred             EecCCCCHHHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhc
Confidence            9999999999985321   13456899999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCCc----cccccccccccccc------cCCCcccHHHHHHHHhhccccc--------ccccccccCCCCCCchHHHHH
Q 045682          213 IPEGE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN--------EIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      .....    ...|...+.+++..      ...+.|+++..++.++.+....        +..........+.......+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T cd08229         156 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE  235 (267)
T ss_pred             cccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccH
Confidence            54322    12333333333322      2346777777777776543221        222222223333333345678


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      ++.+++.+||+.+|.+|||+.+|++.+.++.
T Consensus       236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         236 ELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            8999999999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=5e-35  Score=265.38  Aligned_cols=250  Identities=14%  Similarity=0.178  Sum_probs=184.2

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhcc-CCcceeeeeeee
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMI-HRCFFKLIGCCL  123 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~  123 (309)
                      +....++|...+.||+|+||.||+|++.       +..||+|++.... ......+.+|++++..+. ||||++++|++.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            5556677888999999999999999862       3679999997653 233457899999999996 999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCC-----------------------------------------------------
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNP-----------------------------------------------------  150 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------------------------  150 (309)
                      ..+..++||||+++|+|.+++......                                                     
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            999999999999999999998643210                                                     


Q ss_pred             --------------------------------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCC
Q 045682          151 --------------------------------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLS  192 (309)
Q Consensus       151 --------------------------------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~  192 (309)
                                                            ......+++..++.++.|++.||.|||   +.+++||||||+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~  268 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAAR  268 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcc
Confidence                                                  011235788889999999999999999   899999999999


Q ss_pred             CeeecCCCcEEEeecccccccCCCcc------cccccccccccccc------CCCcccHHHHHHHHhh-cc-ccc-----
Q 045682          193 NILFNEENVAKLFDFSFSISIPEGEL------LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED-RLN-----  253 (309)
Q Consensus       193 Nill~~~~~~kl~Dfg~a~~~~~~~~------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~-~~~-----  253 (309)
                      |||+++++.+||+|||+++.......      ..+...+.+++...      ..+.|+++..+++++. +. .+.     
T Consensus       269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~  348 (401)
T cd05107         269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN  348 (401)
T ss_pred             eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence            99999999999999999976432211      11222233333221      2355666666666554 22 111     


Q ss_pred             ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          254 EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       254 ~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      +.......+......+...+.++.+|+..||+.+|.+||++.+|++.|+++.
T Consensus       349 ~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         349 EQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            1111111122222223345688999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.8e-34  Score=249.10  Aligned_cols=240  Identities=20%  Similarity=0.271  Sum_probs=176.0

Q ss_pred             CCccCceeecCCeEEEEEEe--CC--eEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC------Cc
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QE--RLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET------QI  127 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~--~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~~  127 (309)
                      |..++.||+|+||.||+|.+  ++  ..+|+|.+...  .......+.+|+.++..++||||+++++++...      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            34577899999999999998  33  36899987654  234457789999999999999999999987532      25


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .+++|||+++|+|.+++..... ......+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Df  156 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRL-GDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADF  156 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcc-cCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCC
Confidence            6899999999999998743221 123456899999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCc
Q 045682          208 SFSISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSG  268 (309)
Q Consensus       208 g~a~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~  268 (309)
                      |+++......      ...+...+.+++..      ...+.|+++..++.++. +..      ..++.+....+..... 
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-  235 (272)
T cd05075         157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQ-  235 (272)
T ss_pred             CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence            9998764432      11122222222221      12355666666666654 221      1122222333332221 


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      +...+..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus       236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            225567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-35  Score=261.67  Aligned_cols=233  Identities=20%  Similarity=0.206  Sum_probs=180.2

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCce
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  128 (309)
                      ....+|..++.||+|+|++|++|+.  +++.+|||++.+.-   ....+-+..|=.+|.+| .||.|++|+--|+++..+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            3457799999999999999999998  88999999986642   22234466788889999 999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      |+|+||+++|+|.++|.       ..+.+++.....++.+|+.||+|||   +.+||||||||+|||+|.||.+||+|||
T Consensus       150 YFvLe~A~nGdll~~i~-------K~Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFG  219 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIK-------KYGSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFG  219 (604)
T ss_pred             EEEEEecCCCcHHHHHH-------HhCcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeecc
Confidence            99999999999999997       5688999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCcc-----------------cccccccccccccc------CCCcccHHHHHHHHhhccccc------cccccc
Q 045682          209 FSISIPEGEL-----------------LTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPL  259 (309)
Q Consensus       209 ~a~~~~~~~~-----------------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~  259 (309)
                      .|+.+++...                 +.|.--|-.|+...      ..+.|.++..++.++.+....      -++..+
T Consensus       220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI  299 (604)
T KOG0592|consen  220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKI  299 (604)
T ss_pred             ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence            9988765432                 22333333333211      234455555555554443221      122333


Q ss_pred             ccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 IMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.-++.++  +..++.+.+|+...|..||.+|+|..+|.+
T Consensus       300 ~~l~y~fp--~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  300 QALDYEFP--EGFPEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             HHhcccCC--CCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence            33333222  244578999999999999999999988864

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-35  Score=244.45  Aligned_cols=222  Identities=18%  Similarity=0.238  Sum_probs=191.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+....||.|+||.|..++.  ++.-+|+|.+....-   ...+...+|-.+|+.+.||+++++++.+.+.+..+|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            4477788899999999999999  889999999987642   34456789999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||++||.|..+|+       ..+.+++..+.-++.||+.||+|||   +.+|++|||||+|||+|.+|.+||+|||+|+.
T Consensus       124 eyv~GGElFS~Lr-------k~~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~  193 (355)
T KOG0616|consen  124 EYVPGGELFSYLR-------KSGRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKR  193 (355)
T ss_pred             eccCCccHHHHHH-------hcCCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEE
Confidence            9999999999998       6678999999999999999999999   99999999999999999999999999999998


Q ss_pred             cCCCc-cccccccccccccccC------CCcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHHHHHHH
Q 045682          213 IPEGE-LLTGLRAFDLARLNED------DGYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       213 ~~~~~-~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      +.... .++|.+-+.+|+....      .++|.++..++++..+.      +...+.+.++.|...++  ...+..+.+|
T Consensus       194 v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP--~~fs~~~kdL  271 (355)
T KOG0616|consen  194 VSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP--SYFSSDAKDL  271 (355)
T ss_pred             ecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC--cccCHHHHHH
Confidence            86654 6789998888876543      35677777777775543      34567778888877654  4667889999


Q ss_pred             HHHcccCCCCCC
Q 045682          280 IFECVNESPVDR  291 (309)
Q Consensus       280 i~~Cl~~~P~~R  291 (309)
                      +...++.|-.+|
T Consensus       272 l~~LL~vD~t~R  283 (355)
T KOG0616|consen  272 LKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHhhhhHhh
Confidence            999999999998

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-34  Score=248.41  Aligned_cols=240  Identities=22%  Similarity=0.311  Sum_probs=181.9

Q ss_pred             CCccCceeecCCeEEEEEEe--C---CeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc-----
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--Q---ERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI-----  127 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~---~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-----  127 (309)
                      |...+.||+|+||.||+|.+  +   +..||+|++....  ......+.+|+..++.++||||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            45678899999999999987  2   2679999987543  3345679999999999999999999998876554     


Q ss_pred             -eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          128 -PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       128 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                       .++++||+++|+|..++..... ......+++..+..++.|++.||.|||   +.+++|+||||+||++++++.+||+|
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~d  156 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRL-GGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVAD  156 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhc-cCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECC
Confidence             7999999999999999853321 123356899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc------cccccccccccc------cccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCC
Q 045682          207 FSFSISIPEGE------LLTGLRAFDLAR------LNEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCS  267 (309)
Q Consensus       207 fg~a~~~~~~~------~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~  267 (309)
                      ||+++......      ...+..++.+++      .....+.|+++..+++++. +...      .++.+....+.... 
T Consensus       157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-  235 (273)
T cd05035         157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK-  235 (273)
T ss_pred             ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence            99998654322      111222222222      2224577888888887764 2221      22333333333222 


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .+..++.++.+++.+||+.||.+|||+.++++.|+++
T Consensus       236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            2335678899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=4.9e-35  Score=251.23  Aligned_cols=238  Identities=16%  Similarity=0.246  Sum_probs=184.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .++|+..+.||+|+||.||+|.. ++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            45688889999999999999998 67889999876543 33567999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++...     ....+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        84 ~~~~L~~~l~~~-----~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          84 AKGSLLDFLKSD-----EGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIED  155 (261)
T ss_pred             CCCcHHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCC
Confidence            999999998622     3456889999999999999999999   89999999999999999999999999999987654


Q ss_pred             Cccc-----cccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHH
Q 045682          216 GELL-----TGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       216 ~~~~-----~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ....     .+...+.+++..      ...+.|+++..++.++. +...      .........+. ..+.....+.++.
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  234 (261)
T cd05072         156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-RMPRMENCPDELY  234 (261)
T ss_pred             CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHH
Confidence            3211     112223333321      13466777777777764 3221      11222222222 2222234567899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      +++.+||+.+|++|||++++.+.|+++
T Consensus       235 ~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         235 DIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-35  Score=257.01  Aligned_cols=230  Identities=18%  Similarity=0.210  Sum_probs=181.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|..  +++.||+|.+....   ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            3678889999999999999998  68999999986532   233456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++.
T Consensus        81 e~~~~~~L~~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~  150 (291)
T cd05612          81 EYVPGGELFSYLR-------NSGRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKK  150 (291)
T ss_pred             eCCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchh
Confidence            9999999999986       4567899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc-ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHH
Q 045682          213 IPEGE-LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       213 ~~~~~-~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..... ...|...|.+|+...      ..+.|+++..++.++.+...      .++...+..+....  +...+..+.+|
T Consensus       151 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l  228 (291)
T cd05612         151 LRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEF--PRHLDLYAKDL  228 (291)
T ss_pred             ccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCC--CccCCHHHHHH
Confidence            64432 234555666665432      23566666666666554322      22233333333222  22346789999


Q ss_pred             HHHcccCCCCCCCC-----HHHHHH
Q 045682          280 IFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      +..||+.||.+||+     +.++++
T Consensus       229 i~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         229 IKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHHHcCCCHHHccCCccCCHHHHhc
Confidence            99999999999995     777763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1.9e-34  Score=251.56  Aligned_cols=245  Identities=19%  Similarity=0.261  Sum_probs=182.1

Q ss_pred             CCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      +|...+.||+|+||.||+|...       ...+++|.+.... ......+.+|+.++..++||||+++++.+..++..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            3677889999999999999872       1568888886553 2345678999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCC-----------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          131 VFEYINCGSLADRIRIQHNP-----------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~-----------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      ++||+++|+|.+++......                 ......+++..++.++.|++.||.|||   +.+++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence            99999999999998532110                 112346889999999999999999999   9999999999999


Q ss_pred             eeecCCCcEEEeecccccccCCCc------ccccccccccccc------ccCCCcccHHHHHHHHhh-ccc------ccc
Q 045682          194 ILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDR------LNE  254 (309)
Q Consensus       194 ill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~------~~~  254 (309)
                      ||+++++.+||+|||+++......      ...+...+.+++.      ....+.|+++..++.++. +..      ..+
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999999987653221      1112223333332      222355666666666654 321      112


Q ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          255 IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       255 ~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +......+ .....+...+.++.+++..||+.+|++||++.++++.|+++..+
T Consensus       238 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         238 LFNLLKTG-YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             HHHHHhCC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence            22221111 12222335667899999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=8.4e-35  Score=249.28  Aligned_cols=234  Identities=17%  Similarity=0.267  Sum_probs=179.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      ++|...+.||+|+||.||.|.+ .+..+|+|.+.... .....+.+|+.++..++||||+++++++......++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            3467788899999999999998 45569999887543 334679999999999999999999999998888999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++..      ....+++..++.++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||+++.....
T Consensus        83 ~~~l~~~i~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05113          83 NGCLLNYLRE------HGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD  153 (256)
T ss_pred             CCcHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence            9999999852      2336899999999999999999999   999999999999999999999999999998765433


Q ss_pred             cccc-----cccccccccc------ccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHHH
Q 045682          217 ELLT-----GLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       217 ~~~~-----g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ....     +...+..++.      ....+.|+++..++.++. +...      .++.+....+..... +...+..+.+
T Consensus       154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  232 (256)
T cd05113         154 EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR-PHLASEKVYA  232 (256)
T ss_pred             ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCC-CCCCCHHHHH
Confidence            2111     1122333332      223456677777777664 3211      122333333333222 2245688999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ++.+||+.+|.+|||+.+|++.|+
T Consensus       233 li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         233 IMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHcCCCcccCCCHHHHHHhhC
Confidence            999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=9.4e-35  Score=253.69  Aligned_cols=249  Identities=20%  Similarity=0.332  Sum_probs=188.2

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeee
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCL  123 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  123 (309)
                      +....++|+..+.||+|+||.||++.+.       ...+|+|.+.... ......+.+|+.++..+ +||||+++++++.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            3444567888899999999999999872       2679999987542 33446688999999999 8999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCC---------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHN---------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                      .++..+++|||+++|+|.+++.....         .......+++..++.++.|++.||+|||   +.+++|+||||+||
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Ni  163 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNV  163 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeE
Confidence            99999999999999999999853210         0123457899999999999999999999   99999999999999


Q ss_pred             eecCCCcEEEeecccccccCCCcc----ccc--cccccccccc------cCCCcccHHHHHHHHhh-ccc------cccc
Q 045682          195 LFNEENVAKLFDFSFSISIPEGEL----LTG--LRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEI  255 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~~~~~~----~~g--~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~  255 (309)
                      +++.++.+||+|||+++.......    ..+  ...+.+|+..      ...+.|+++..+++++. +..      ..+.
T Consensus       164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  243 (293)
T cd05053         164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL  243 (293)
T ss_pred             EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH
Confidence            999999999999999987644321    111  1223333322      23477888888877654 221      1222


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      .+....+... ..+...+..+.+|+.+||+.+|++|||+.++++.|+++.
T Consensus       244 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         244 FKLLKEGYRM-EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHHHHcCCcC-CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            2222222221 222345678999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.6e-34  Score=252.20  Aligned_cols=247  Identities=17%  Similarity=0.258  Sum_probs=188.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .+|.....||+|+||.||+|.+       ++..+++|.+........+.+.+|+.++..++||||+++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            4577788999999999999985       235689999877665556779999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCC---------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc
Q 045682          131 VFEYINCGSLADRIRIQHN---------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV  201 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~---------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~  201 (309)
                      ||||+++++|.+++..+..         .......+++..++.++.|++.||+|||   +++++|+||||+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence            9999999999999864321         0112345899999999999999999999   999999999999999999999


Q ss_pred             EEEeecccccccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccC
Q 045682          202 AKLFDFSFSISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMG  262 (309)
Q Consensus       202 ~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g  262 (309)
                      ++|+|||++.......      ...+...+.+|+..      ...+.|+++..+++++. +...      .+.++....+
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  241 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG  241 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC
Confidence            9999999987653322      12223334444422      23466777777777664 3322      1122222223


Q ss_pred             CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          263 DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       263 ~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ..+. .+...+..+.+++.+||+.+|++|||+.+|+++|+++.++.
T Consensus       242 ~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~  286 (291)
T cd05094         242 RVLE-RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT  286 (291)
T ss_pred             CCCC-CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence            3222 22345678999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.8e-34  Score=246.37  Aligned_cols=229  Identities=19%  Similarity=0.268  Sum_probs=173.8

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      +.||+|+||.||+|.+  +++.+|+|.+.... ......+.+|+.+++.++||||+++++++......++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3689999999999998  78999999876543 33456799999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCccc-
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL-  219 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-  219 (309)
                      .+++..      ....+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++......... 
T Consensus        81 ~~~~~~------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  151 (252)
T cd05084          81 LTFLRT------EGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS  151 (252)
T ss_pred             HHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccc
Confidence            999851      2346899999999999999999999   999999999999999999999999999998765432211 


Q ss_pred             -----ccccccccccccc------CCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          220 -----TGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       220 -----~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                           .+...+.+|+...      ..+.|+++..++.++. +....      ........+. +...+...+..+.+++.
T Consensus       152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~  230 (252)
T cd05084         152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV-RLPCPELCPDAVYRLME  230 (252)
T ss_pred             cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC-CCCCcccCCHHHHHHHH
Confidence                 1111233333221      2355666666666553 22111      1111111111 11223355678999999


Q ss_pred             HcccCCCCCCCCHHHHHHHHH
Q 045682          282 ECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      +||+.+|++|||+.+|.++|+
T Consensus       231 ~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         231 RCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHcCCChhhCcCHHHHHHHHh
Confidence            999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.4e-34  Score=252.08  Aligned_cols=247  Identities=19%  Similarity=0.272  Sum_probs=188.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      .++|...+.||+|+||.||++..       ++..+|+|.+..........+.+|+.++.+++||||+++++++...+..+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            35688889999999999999985       23568999987766566678999999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCC------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEE
Q 045682          130 LVFEYINCGSLADRIRIQHN------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~k  203 (309)
                      +||||+++++|.+++.....      .......+++..++.++.|++.||+|||   +.+++||||||+||++++++.+|
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~k  160 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK  160 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEE
Confidence            99999999999999863321      0112345999999999999999999999   99999999999999999999999


Q ss_pred             EeecccccccCCCcc------cccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCC
Q 045682          204 LFDFSFSISIPEGEL------LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDR  264 (309)
Q Consensus       204 l~Dfg~a~~~~~~~~------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~  264 (309)
                      |+|||++........      ..+...+.+|+...      ..+.|+++..++.++. +...      .+.+.....+..
T Consensus       161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~  240 (288)
T cd05093         161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV  240 (288)
T ss_pred             eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Confidence            999999976543221      11122344444221      2456666666666654 3321      122333333333


Q ss_pred             CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          265 SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       265 ~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ... +...+.++.+|+.+||+.+|.+|||+.++.+.|+++.++
T Consensus       241 ~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         241 LQR-PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             CCC-CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            221 224567899999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.5e-34  Score=249.49  Aligned_cols=239  Identities=17%  Similarity=0.236  Sum_probs=178.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe----EEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER----LISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++|...+.||+|+||.||+|.+  +++    .+++|.+.... .....++..|+..+.+++||||++++|++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            4577788999999999999998  454    47888875443 2334668888889999999999999998864 45789


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ++||+++|+|.+++..      ....+++..+..++.|++.||+|||   +.+++|+||||+|||++.++.+||+|||++
T Consensus        86 i~e~~~~gsL~~~l~~------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~  156 (279)
T cd05111          86 VTQLSPLGSLLDHVRQ------HRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVA  156 (279)
T ss_pred             EEEeCCCCcHHHHHHh------cccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccc
Confidence            9999999999999862      2457899999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          211 ISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      +......      ...+...+..++..      ...+.|+++..+|+++. +...      ..+.+....+..+. .+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~  235 (279)
T cd05111         157 DLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLA-QPQI  235 (279)
T ss_pred             eeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC-CCCC
Confidence            8654322      11122233333322      23466777777777764 2211      11122222233222 2224


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ++..+.+++.+||..+|+.|||+.++++.|..+...
T Consensus       236 ~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         236 CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence            556789999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.4e-34  Score=248.86  Aligned_cols=227  Identities=18%  Similarity=0.258  Sum_probs=172.6

Q ss_pred             CceeecCCeEEEEEEeC--------------CeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           64 KVIMKRSFYTLYKGFCQ--------------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~--------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      +.||+|+||.||+|.+.              ...|++|.+..........+.+|+.++..++||||+++++++..+...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            36899999999999861              2358999887665555567899999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc-------E
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV-------A  202 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~-------~  202 (309)
                      +||||+++|+|..++..      ....+++..++.++.||+.||+|||   +.+++||||||+|||++.++.       +
T Consensus        81 lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~  151 (262)
T cd05077          81 MVEEFVEFGPLDLFMHR------KSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFI  151 (262)
T ss_pred             EEEecccCCCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCcee
Confidence            99999999999998751      2456899999999999999999999   999999999999999987664       8


Q ss_pred             EEeecccccccCCCccccccccccccccccC-------CCcccHHHHHHHHhh-ccccccc-----ccccccCCCCCCch
Q 045682          203 KLFDFSFSISIPEGELLTGLRAFDLARLNED-------DGYVALRDHVKKYFE-EDRLNEI-----IDPLIMGDRSCSGK  269 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~g~~~~~~~  269 (309)
                      +++|||++..........+..++.+|+....       .+.|+++..+|+++. +.....-     ......+.....  
T Consensus       152 ~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~--  229 (262)
T cd05077         152 KLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLV--  229 (262)
T ss_pred             EeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCC--
Confidence            9999999987655554556666666664322       355666666666542 2111100     001111111111  


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      ...+.++.+|+.+||+.||.+||++.+|++.|
T Consensus       230 ~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         230 TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            12346789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.4e-35  Score=262.84  Aligned_cols=229  Identities=18%  Similarity=0.268  Sum_probs=194.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|...+.||+|+||.||||+-  +.+.||+|.+.+..  ....+.+.+|+++++.++||||+.++++|......|+|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            4577788999999999999998  77999999997764  3456779999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+.| +|..+|.       ..+.++++++..++.|++.||.|||   +.+|+|||+||+|||++.+|++|+||||+|+..
T Consensus        82 ~a~g-~L~~il~-------~d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m  150 (808)
T KOG0597|consen   82 YAVG-DLFTILE-------QDGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAM  150 (808)
T ss_pred             hhhh-hHHHHHH-------hccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhc
Confidence            9987 9999997       7889999999999999999999999   999999999999999999999999999999988


Q ss_pred             CCCc----cccccccccccccccC------CCcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHHHHH
Q 045682          214 PEGE----LLTGLRAFDLARLNED------DGYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ..+.    .+.|.+-|.+|+...+      .+.|+++...++.+.+.      ++.+++..+......++  ...+..+.
T Consensus       151 ~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p--~~~S~~f~  228 (808)
T KOG0597|consen  151 STNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP--STASSSFV  228 (808)
T ss_pred             ccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc--ccccHHHH
Confidence            7664    3457777777766543      34566666666665554      45566666665555443  47888999


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+++..+++||..|.|..+++.
T Consensus       229 nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  229 NFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHHHhhcChhhcccHHHHhc
Confidence            9999999999999999998863

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.1e-34  Score=249.27  Aligned_cols=234  Identities=21%  Similarity=0.288  Sum_probs=177.7

Q ss_pred             CCccCceeecCCeEEEEEEe------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPIL  130 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  130 (309)
                      |...+.||+|+||+||.+.+      ++..||+|.+.... ......+.+|+.+++.++||||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            37778999999999988653      56789999987653 23456788999999999999999999988753  35789


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++++|.+++.        ...+++.++..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++
T Consensus        86 v~e~~~~~~l~~~~~--------~~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~  154 (283)
T cd05080          86 IMEYVPLGSLRDYLP--------KHKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLA  154 (283)
T ss_pred             EecCCCCCCHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccc
Confidence            999999999999985        345999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCcc-------ccccccccccc------cccCCCcccHHHHHHHHhhcccccc--------cccccc---------
Q 045682          211 ISIPEGEL-------LTGLRAFDLAR------LNEDDGYVALRDHVKKYFEEDRLNE--------IIDPLI---------  260 (309)
Q Consensus       211 ~~~~~~~~-------~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~---------  260 (309)
                      ........       ..+...+..++      .....+.|+++..++.++.+.....        ......         
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd05080         155 KAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI  234 (283)
T ss_pred             cccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhh
Confidence            86643221       11111222222      2224577888888888776432111        110000         


Q ss_pred             ----cCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          261 ----MGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       261 ----~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                          .+. ..+.+...+.++.+++..||+.+|++|||+.+|++.|+++.
T Consensus       235 ~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         235 ELLERGM-RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hhhhcCC-CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence                001 11112245678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-36  Score=269.57  Aligned_cols=234  Identities=21%  Similarity=0.313  Sum_probs=189.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe---CC--eEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC---QE--RLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~---~~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      +.....++||+|.||.|++|.|   .|  -.||||.+...... ....|++|+.+|.+|+|||+++|||+..+ ....||
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence            3345567899999999999999   23  56899999887644 67889999999999999999999999998 778999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      +|+++.|||.+.|..     .....+.......++.|||.||.||.   .+++|||||.++|+|+....+|||+||||.+
T Consensus       189 ~ELaplGSLldrLrk-----a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmR  260 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRK-----AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMR  260 (1039)
T ss_pred             hhhcccchHHHHHhh-----ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeeccccee
Confidence            999999999999873     24566788888999999999999999   9999999999999999999999999999999


Q ss_pred             ccCCCc---ccccc----ccccccc------cccCCCcccHHHHHHHHhhccc-------ccccccccccCCCCCCchHH
Q 045682          212 SIPEGE---LLTGL----RAFDLAR------LNEDDGYVALRDHVKKYFEEDR-------LNEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       212 ~~~~~~---~~~g~----~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~  271 (309)
                      .+..++   ..++.    ..+++++      ....++.|.++..+|++|....       -.+++..+-.|+....+ ..
T Consensus       261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRP-k~  339 (1039)
T KOG0199|consen  261 ALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRP-KY  339 (1039)
T ss_pred             ccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCC-CC
Confidence            887654   11111    1223332      3446788999999999986542       23344444445554443 48


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      |++.+++++.+||..+|.+||||..|.+.+
T Consensus       340 csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  340 CSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             ChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence            999999999999999999999999998654

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=9.6e-35  Score=258.67  Aligned_cols=249  Identities=18%  Similarity=0.283  Sum_probs=183.8

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeee-
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLE-  124 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~-  124 (309)
                      .+.++|...+.||+|+||.||+|.+       +++.||+|++.... ....+.+..|+.++.++ +|+||++++++|.. 
T Consensus         4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~   83 (337)
T cd05054           4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP   83 (337)
T ss_pred             cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence            3445788899999999999999975       23689999987543 23345688999999999 89999999998865 


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCC------------------------------------------------------
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNP------------------------------------------------------  150 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------  150 (309)
                      +...+++|||+++++|.+++......                                                      
T Consensus        84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (337)
T cd05054          84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD  163 (337)
T ss_pred             CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence            45688999999999999998532110                                                      


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc------ccccccc
Q 045682          151 QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRA  224 (309)
Q Consensus       151 ~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~  224 (309)
                      ......+++..+..++.||+.||.|||   +.+|+||||||+||+++.++.++|+|||++.......      ...+...
T Consensus       164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~  240 (337)
T cd05054         164 ELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK  240 (337)
T ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence            001236899999999999999999999   9999999999999999999999999999998653321      1111222


Q ss_pred             cccccc------ccCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCC
Q 045682          225 FDLARL------NEDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDR  291 (309)
Q Consensus       225 ~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~R  291 (309)
                      +.+|+.      ....+.|+++..+++++. +....      +.+............+...+.++.+++.+||+.+|++|
T Consensus       241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  320 (337)
T cd05054         241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDR  320 (337)
T ss_pred             ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence            334442      223477778877777764 33221      11111111111122223456789999999999999999


Q ss_pred             CCHHHHHHHHHHHHH
Q 045682          292 PTMVDVAKKLKQMYR  306 (309)
Q Consensus       292 Pt~~~l~~~L~~l~~  306 (309)
                      |++.+|++.|+.+..
T Consensus       321 Ps~~ell~~l~~~~~  335 (337)
T cd05054         321 PTFSELVEILGDLLQ  335 (337)
T ss_pred             cCHHHHHHHHHHHHh
Confidence            999999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.9e-34  Score=251.02  Aligned_cols=231  Identities=15%  Similarity=0.182  Sum_probs=178.8

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      |...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.++.+++|+||+++++++.+++..++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            66778999999999999998  78999999986542   22334578999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++|+|.+++...     ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        82 ~~~g~L~~~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05631          82 MNGGDLKFHIYNM-----GNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIP  153 (285)
T ss_pred             cCCCcHHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence            9999999887521     2346899999999999999999999   9999999999999999999999999999998764


Q ss_pred             CCcc---ccccccccccccc------cCCCcccHHHHHHHHhhcccccc---------cccccccCCCCCCchHHHHHHH
Q 045682          215 EGEL---LTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE---------IIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       215 ~~~~---~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....   ..|...+.+|+..      ...+.|+++..++.++.+.....         .++..... .....+...+..+
T Consensus       154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~  232 (285)
T cd05631         154 EGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-DQEEYSEKFSEDA  232 (285)
T ss_pred             CCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-ccccCCccCCHHH
Confidence            4322   2345555555532      23477888888888766543321         11111111 1111223456789


Q ss_pred             HHHHHHcccCCCCCCCC-----HHHHHH
Q 045682          277 AHLIFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      .+|+.+||+.||.+||+     +.++++
T Consensus       233 ~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         233 KSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            99999999999999997     777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.6e-34  Score=268.40  Aligned_cols=233  Identities=17%  Similarity=0.180  Sum_probs=183.1

Q ss_pred             CCccCceeecCCeEEEEEEe--C-CeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--Q-ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      |...+.||+|+||.||+|..  + +..||+|.+..........+.+|+.+++.++||||+++++++..++..++||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            78888999999999999987  4 67889998766555555678889999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++....   ....++++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus       149 gg~L~~~l~~~~---~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~  222 (478)
T PTZ00267        149 GGDLNKQIKQRL---KEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS  222 (478)
T ss_pred             CCCHHHHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence            999999875221   13456899999999999999999999   999999999999999999999999999999876432


Q ss_pred             c------ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHH
Q 045682          217 E------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       217 ~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      .      ...|...|.+|+...      ..+.|+++..++.++.+...      .+++.....+..... +...+.++.+
T Consensus       223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~  301 (478)
T PTZ00267        223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF-PCPVSSGMKA  301 (478)
T ss_pred             cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-CccCCHHHHH
Confidence            1      233555566665332      23456666666666554322      233444444544322 2255678999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++..||+.+|+.|||+.+++.
T Consensus       302 li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        302 LLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHhccChhhCcCHHHHHh
Confidence            999999999999999999864

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=8.6e-35  Score=257.63  Aligned_cols=224  Identities=14%  Similarity=0.165  Sum_probs=176.8

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      +.||+|+||.||+|..  +++.||+|.+....   ......+.+|+.++..++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999998  78999999987532   233456889999999999999999999999999999999999999


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC--
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG--  216 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--  216 (309)
                      +|.+++.       ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        81 ~L~~~l~-------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~  150 (323)
T cd05571          81 ELFFHLS-------RERVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             cHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC
Confidence            9999986       4567899999999999999999999   999999999999999999999999999998754221  


Q ss_pred             --cccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHHH
Q 045682          217 --ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       217 --~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~~  282 (309)
                        ....|...|.+|+...      ..+.|+++..++.++.+...      .........+...  .+...+.++.+++.+
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~li~~  228 (323)
T cd05571         151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLSPEAKSLLAG  228 (323)
T ss_pred             cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHH
Confidence              2344666666665432      34667777777776654322      1222222223222  123456789999999


Q ss_pred             cccCCCCCCC-----CHHHHHH
Q 045682          283 CVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       283 Cl~~~P~~RP-----t~~~l~~  299 (309)
                      ||+.||++||     ++.++++
T Consensus       229 ~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         229 LLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HccCCHHHcCCCCCCCHHHHHc
Confidence            9999999999     7888864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.8e-34  Score=247.33  Aligned_cols=234  Identities=17%  Similarity=0.205  Sum_probs=180.3

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|+..+.||+|+||.||+|..  +++.||+|.+..........+.+|+.++.+++||||+++++++..++..++||||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            35688899999999999999998  7789999998765545556788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++.       ....+++..+..++.|++.||.|||   +.+|+|+||+|+||+++.++.+||+|||++....
T Consensus        88 ~~~~~L~~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646          88 CGGGSLQDIYH-------VTGPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             CCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeec
Confidence            99999999986       4567899999999999999999999   8999999999999999999999999999987653


Q ss_pred             CC----ccccccccccccccc---------cCCCcccHHHHHHHHhhcccccc------cccccccCCCCC---CchHHH
Q 045682          215 EG----ELLTGLRAFDLARLN---------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSC---SGKEQQ  272 (309)
Q Consensus       215 ~~----~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~---~~~~~~  272 (309)
                      ..    ....|...+.+|+..         ...+.|+++..++.++.+.....      ............   ......
T Consensus       158 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (267)
T cd06646         158 ATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKW  237 (267)
T ss_pred             ccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCcccccc
Confidence            22    122344444444432         12456666666666654432111      011111111111   111234


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      +..+.+++.+||+.+|++|||+.+|++.
T Consensus       238 ~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         238 SSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             CHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            6789999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1e-34  Score=260.22  Aligned_cols=227  Identities=18%  Similarity=0.206  Sum_probs=175.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|+..+.||+|+||.||+|.+  +++.||+|.+.... ......+.+|+.++..++|+||+++++++...+..++||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            3456677899999999999998  68999999986543 33446789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++|+|.+..           ..++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       154 ~~~~~L~~~~-----------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~  219 (353)
T PLN00034        154 MDGGSLEGTH-----------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA  219 (353)
T ss_pred             CCCCcccccc-----------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence            9999987542           3467778899999999999999   9999999999999999999999999999998654


Q ss_pred             CC----ccccccccccccccc-----------cCCCcccHHHHHHHHhhcccccc---------cccccccCCCCCCchH
Q 045682          215 EG----ELLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLNE---------IIDPLIMGDRSCSGKE  270 (309)
Q Consensus       215 ~~----~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~  270 (309)
                      ..    ....|...|.+++..           ...+.|+++..+++++.+.....         .+.....+. ....+.
T Consensus       220 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~  298 (353)
T PLN00034        220 QTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ-PPEAPA  298 (353)
T ss_pred             cccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-CCCCCC
Confidence            32    223455556555532           12466777777777665433211         011111111 111223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.++.+|+..||+.||++|||+.||++
T Consensus       299 ~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        299 TASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            55678999999999999999999999985

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-35  Score=256.32  Aligned_cols=219  Identities=16%  Similarity=0.154  Sum_probs=174.0

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ||+|+||.||+|..  +++.||+|.+...   .......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999999998  6789999998653   233456788999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC----
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG----  216 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----  216 (309)
                      .+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....    
T Consensus        81 ~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  150 (312)
T cd05585          81 FHHLQ-------REGRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKT  150 (312)
T ss_pred             HHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcc
Confidence            99986       4567899999999999999999999   999999999999999999999999999998754222    


Q ss_pred             ccccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHHHcc
Q 045682          217 ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIFECV  284 (309)
Q Consensus       217 ~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl  284 (309)
                      ....|...|.+|+..      ...+.|+++..++.++.+...      .+.......+...  .+...+.++.+++.+||
T Consensus       151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L  228 (312)
T cd05585         151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR--FPDGFDRDAKDLLIGLL  228 (312)
T ss_pred             ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC--CCCcCCHHHHHHHHHHc
Confidence            133466666666532      235778888888877655432      2223333333222  22355678999999999


Q ss_pred             cCCCCCCCCHHH
Q 045682          285 NESPVDRPTMVD  296 (309)
Q Consensus       285 ~~~P~~RPt~~~  296 (309)
                      +.||.+||++..
T Consensus       229 ~~dp~~R~~~~~  240 (312)
T cd05585         229 SRDPTRRLGYNG  240 (312)
T ss_pred             CCCHHHcCCCCC
Confidence            999999986433

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3.9e-35  Score=251.56  Aligned_cols=228  Identities=20%  Similarity=0.297  Sum_probs=176.5

Q ss_pred             CceeecCCeEEEEEEe--CC-------eEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           64 KVIMKRSFYTLYKGFC--QE-------RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +.||.|+||.||+|..  .+       ..|++|.+........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            3689999999999987  22       34888887665555567889999999999999999999999998999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc--------EEEee
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV--------AKLFD  206 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~--------~kl~D  206 (309)
                      +++|+|.+++..      ....+++..++.++.||+.||+|||   +.+|+||||||+||+++.++.        ++++|
T Consensus        81 ~~~g~L~~~l~~------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d  151 (258)
T cd05078          81 VKFGSLDTYLKK------NKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD  151 (258)
T ss_pred             CCCCcHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecc
Confidence            999999999861      2346899999999999999999999   999999999999999987765        69999


Q ss_pred             cccccccCCCcccccccccccccccc-------CCCcccHHHHHHHHhhcc-ccccccccc----ccCCCCCCchHHHHH
Q 045682          207 FSFSISIPEGELLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEED-RLNEIIDPL----IMGDRSCSGKEQQLQ  274 (309)
Q Consensus       207 fg~a~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~g~~~~~~~~~~~~  274 (309)
                      ||++......+...+..++.+|+...       ..+.|+++..++.++.+. ......+..    ..... ...+.....
T Consensus       152 ~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  230 (258)
T cd05078         152 PGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDR-HQLPAPKWT  230 (258)
T ss_pred             cccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHcc-ccCCCCCcH
Confidence            99998777666667777776666433       235666666666666542 211111110    00111 111123346


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      ++.+|+.+||+.+|++|||+.+|++.|
T Consensus       231 ~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         231 ELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            799999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-35  Score=258.65  Aligned_cols=232  Identities=15%  Similarity=0.139  Sum_probs=181.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.++..++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            3688889999999999999999  68999999986542   233466889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++..
T Consensus        81 e~~~g~~L~~~l~-------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~  150 (333)
T cd05600          81 EYVPGGDFRTLLN-------NLGVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKG  150 (333)
T ss_pred             eCCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCcc
Confidence            9999999999986       4567899999999999999999999   99999999999999999999999999999976


Q ss_pred             cCCC-ccccccccccccccc------cCCCcccHHHHHHHHhhccccc------ccccccccCC----CCCC--chHHHH
Q 045682          213 IPEG-ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGD----RSCS--GKEQQL  273 (309)
Q Consensus       213 ~~~~-~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~----~~~~--~~~~~~  273 (309)
                      .... ....|...|.+|+..      ...+.|+++..++.++.+....      +....+....    .+..  .....+
T Consensus       151 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s  230 (333)
T cd05600         151 IVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLS  230 (333)
T ss_pred             cccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccC
Confidence            5432 223455555555532      2346777887777776543321      1111111110    0100  011346


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .++.+++.+||+.+|.+||++.++++
T Consensus       231 ~~~~~li~~~l~~~~~rr~s~~~ll~  256 (333)
T cd05600         231 DEAWDLITKLINDPSRRFGSLEDIKN  256 (333)
T ss_pred             HHHHHHHHHHhhChhhhcCCHHHHHh
Confidence            78999999999999999999999975

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3.5e-34  Score=251.49  Aligned_cols=246  Identities=19%  Similarity=0.225  Sum_probs=182.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe--EEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER--LISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|+..+.||+|+||.||+|.+  ++.  .+++|.+.... ......+.+|+.++.++ +||||+++++++..++..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            5688889999999999999997  443  46888776532 33446788999999999 899999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          132 FEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      |||+++|+|.+++......         ......+++.+++.++.|++.||+|||   +.+++||||||+|||++.++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcE
Confidence            9999999999998643211         012346899999999999999999999   9999999999999999999999


Q ss_pred             EEeecccccccCCC---ccccccccccccc------cccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCC
Q 045682          203 KLFDFSFSISIPEG---ELLTGLRAFDLAR------LNEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSC  266 (309)
Q Consensus       203 kl~Dfg~a~~~~~~---~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~  266 (309)
                      ||+|||++......   ....+...+.+++      .....+.|+++..++.++. +...      .+.......+. ..
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~  242 (303)
T cd05088         164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RL  242 (303)
T ss_pred             EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-cC
Confidence            99999998643211   1111111222222      1234577888888887764 2211      12222222221 11


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..+...+.++.+|+.+||+.+|++||++.++++.|+.+...
T Consensus       243 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         243 EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            12223457799999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.7e-34  Score=249.02  Aligned_cols=241  Identities=19%  Similarity=0.297  Sum_probs=184.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe-C------CeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-Q------ERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++|...+.||+|+||.||+|.+ .      +..||+|.+...... ....+.+|++++..++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            4577788999999999999987 2      378999998765433 4578999999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCC-------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          130 LVFEYINCGSLADRIRIQHNP-------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~-------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      +||||+++++|.+++......       ......+++.++..++.|++.|+.|||   +.+++|+||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence            999999999999998643210       123356889999999999999999999   8999999999999999999999


Q ss_pred             EEeecccccccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCC
Q 045682          203 KLFDFSFSISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGD  263 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~  263 (309)
                      ||+|||++.......      ...+...+.+|+..      ...+.|+++..+++++. +...      .+.++....+.
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR  241 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            999999987543322      11122334444432      22456677777776664 3221      22333333333


Q ss_pred             CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          264 RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       264 ~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      .+.. +...+..+.+++.+||+.||++|||+.+|++.|+
T Consensus       242 ~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         242 LLQR-PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             cCCC-CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            3222 2356688999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.4e-34  Score=251.80  Aligned_cols=232  Identities=16%  Similarity=0.183  Sum_probs=175.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+..+.||+|+||.||+|++  +++.||+|++....  ....+.+.+|+.++..++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            3688889999999999999999  67899999986542  2344678899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |++++.+..+..       ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++...
T Consensus        81 ~~~~~~l~~~~~-------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~  150 (287)
T cd07848          81 YVEKNMLELLEE-------MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNL  150 (287)
T ss_pred             cCCCCHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccc
Confidence            999877766543       3457899999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCc-----ccccccccccccccc------CCCcccHHHHHHHHhhccccccccc------c--cccCC-----------
Q 045682          214 PEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEIID------P--LIMGD-----------  263 (309)
Q Consensus       214 ~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~g~-----------  263 (309)
                      ....     ...|...+.+|+...      ..+.|+++..++.++.+.......+      .  ...+.           
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07848         151 SEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS  230 (287)
T ss_pred             cccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence            4322     223445555554322      3456677777766655442211000      0  00000           


Q ss_pred             --------CCCC---------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 --------RSCS---------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 --------~~~~---------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                              .+..         .....+.++.+|+.+||+.||++|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                    0000         00124567999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.4e-34  Score=250.74  Aligned_cols=243  Identities=16%  Similarity=0.254  Sum_probs=179.8

Q ss_pred             HhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      .+++|+....||+|+||.||+|.+.       +..||+|.+.... ......+.+|+.+++.++||||+++++++..++.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4567899999999999999999863       3679999986543 2344568999999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCC---CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          128 PILVFEYINCGSLADRIRIQHNP---QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~---~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                      .++||||+++|+|.+++......   ......+++..+..++.|++.||.|||   +.+++|+||||+||++++++.++|
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence            99999999999999998632211   011345688899999999999999999   899999999999999999999999


Q ss_pred             eecccccccCCCccc------ccccccccccccc------CCCcccHHHHHHHHhh-ccc-c-----cccccccccCCCC
Q 045682          205 FDFSFSISIPEGELL------TGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR-L-----NEIIDPLIMGDRS  265 (309)
Q Consensus       205 ~Dfg~a~~~~~~~~~------~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~g~~~  265 (309)
                      +|||+++........      .+...+.+|+...      ..+.|+++..+++++. +.. +     .+.......+..+
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~  240 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL  240 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            999998765432211      1122233443321      2355666666666554 111 1     1112212222221


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      . .+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       241 ~-~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         241 D-KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             C-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            1 12345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.9e-34  Score=251.40  Aligned_cols=232  Identities=14%  Similarity=0.138  Sum_probs=171.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|...+.||.|+||.||+|..  ++..||+|.+.... ......+.+|+.+++.++||||+++++++..++..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            4688889999999999999998  78999999986543 23345678999999999999999999999998899999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++ +|.+++..      ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus        85 ~~~-~l~~~l~~------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          85 LDS-DLKQYLDN------CGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             CCc-CHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            985 99998852      2345789999999999999999999   9999999999999999999999999999987643


Q ss_pred             CCc----cccccccccccccccC-------CCcccHHHHHHHHhhccccc------cccccccc--C-------------
Q 045682          215 EGE----LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLN------EIIDPLIM--G-------------  262 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--g-------------  262 (309)
                      ...    ...|...+.+|+...+       .+.|+++..++.++.+....      +.+.....  +             
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07871         155 VPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN  234 (288)
T ss_pred             CCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence            221    1233444555553322       24455555555554433211      10000000  0             


Q ss_pred             ----C--CCC---C----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 ----D--RSC---S----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ----~--~~~---~----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                          .  .+.   .    .....+.++.+|+.+||+.||.+|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                0  000   0    00123467889999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=6.2e-34  Score=249.98  Aligned_cols=248  Identities=16%  Similarity=0.266  Sum_probs=186.6

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe---------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC---------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~---------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      ..++|.....||+|+||.||+|.+         ++..||+|.+.... ......+.+|+.++..+ +||||+++++++..
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            346688889999999999999975         23579999886542 34456789999999999 89999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCee
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQ---------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL  195 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nil  195 (309)
                      ....++||||+++|+|.+++.......         .....+++.++..++.|++.||.|||   +.+++|+||||+||+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nil  169 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVL  169 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEE
Confidence            999999999999999999986432110         12346889999999999999999999   999999999999999


Q ss_pred             ecCCCcEEEeecccccccCCCcc----cc--ccccccccccc------cCCCcccHHHHHHHHhh-cc------cccccc
Q 045682          196 FNEENVAKLFDFSFSISIPEGEL----LT--GLRAFDLARLN------EDDGYVALRDHVKKYFE-ED------RLNEII  256 (309)
Q Consensus       196 l~~~~~~kl~Dfg~a~~~~~~~~----~~--g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~------~~~~~~  256 (309)
                      ++.++.+||+|||+++.......    ..  +...+.+++..      ...+.|+++..++.++. +.      ...++.
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  249 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  249 (304)
T ss_pred             EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            99999999999999987643221    11  11224444422      23456666666666654 21      122333


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .....+... ..+..++.++.+++.+||+.+|.+|||+.+|++.|+++...
T Consensus       250 ~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         250 KLLKEGHRM-DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             HHHHcCCcC-CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            333222222 22235678899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-35  Score=242.14  Aligned_cols=234  Identities=17%  Similarity=0.232  Sum_probs=190.2

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-----c---hhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-----P---RMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~---~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      ....|...+.||.|..++|.++.+  ++...|+|++....     .   ...+.-.+|+.||+++ .||+|+++.+++..
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            346688899999999999999998  88999999985532     1   1223457899999999 89999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                      +...++|+|.|+.|.|.|+|.       ....+++....+|+.|+..|++|||   .++||||||||+|||++++.++||
T Consensus        95 ~sF~FlVFdl~prGELFDyLt-------s~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~i  164 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLT-------SKVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKI  164 (411)
T ss_pred             cchhhhhhhhcccchHHHHhh-------hheeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEE
Confidence            999999999999999999997       7788999999999999999999999   999999999999999999999999


Q ss_pred             eecccccccCCCc---ccccccccccccccc-----CCCcccHHHHHH-------HHhhcccc------cccccccccCC
Q 045682          205 FDFSFSISIPEGE---LLTGLRAFDLARLNE-----DDGYVALRDHVK-------KYFEEDRL------NEIIDPLIMGD  263 (309)
Q Consensus       205 ~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~-----~~~~~~~~~~~~-------~~~~~~~~------~~~~~~~~~g~  263 (309)
                      +|||+|....+++   -++|.+.+.+|+...     +.+.++...+.|       .++.+...      .-.+.-+..|.
T Consensus       165 sDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk  244 (411)
T KOG0599|consen  165 SDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK  244 (411)
T ss_pred             eccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc
Confidence            9999999998887   577888888776433     223333333333       33333222      22344556677


Q ss_pred             CCCCch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 RSCSGK--EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 ~~~~~~--~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+..+  .+.+...++||.+||+.||..|.|++|.++
T Consensus       245 yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  245 YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            665543  477888999999999999999999999874

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2.9e-34  Score=246.74  Aligned_cols=238  Identities=18%  Similarity=0.244  Sum_probs=181.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .++|...+.||+|+||.||+|.+ ....||+|.+.... ...+.+.+|+.++..++||||+++++++.+ ...++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence            45688899999999999999998 55679999987543 234678999999999999999999998754 5579999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++...     ....+++..+..++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||++.....
T Consensus        83 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~  154 (262)
T cd05071          83 SKGSLLDFLKGE-----MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED  154 (262)
T ss_pred             CCCcHHHHHhhc-----cccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccc
Confidence            999999998621     2346899999999999999999999   99999999999999999999999999999976644


Q ss_pred             Ccc-----ccccccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHHH
Q 045682          216 GEL-----LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       216 ~~~-----~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ...     ..+...+..|+..      ...+.|+++..++.++. +..      ..+..+....+. ....+...+..+.
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~  233 (262)
T cd05071         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPCPPECPESLH  233 (262)
T ss_pred             cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-CCCCccccCHHHH
Confidence            331     1122234344322      23456666666666654 221      112222222222 1222335678899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      +|+.+||+.+|++|||+.++.+.|++..
T Consensus       234 ~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         234 DLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            9999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=3.6e-34  Score=245.17  Aligned_cols=236  Identities=18%  Similarity=0.245  Sum_probs=179.2

Q ss_pred             cCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeee-eCCceEEEEEecc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL-ETQIPILVFEYIN  136 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~-~~~~~~lv~e~~~  136 (309)
                      .+|...+.||+|+||.||++...+..|++|.+....  ..+.+.+|+.+++.++|+|++++++++. .++..+++|||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   83 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence            457888899999999999999999999999986543  3467899999999999999999999765 4567899999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +++|.+++...     ....+++..++.++.|++.||+|||   +.+++|+||||+||+++.++.+||+|||++......
T Consensus        84 ~~~L~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  155 (256)
T cd05082          84 KGSLVDYLRSR-----GRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  155 (256)
T ss_pred             CCcHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence            99999998621     2345889999999999999999999   899999999999999999999999999998765432


Q ss_pred             cc-ccccccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHHHHHHHH
Q 045682          217 EL-LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       217 ~~-~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~  282 (309)
                      .. ..+...+.+++..      ...+.|+++..++.++. +..      ..++......+ .....+..++..+.+++.+
T Consensus       156 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~  234 (256)
T cd05082         156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPVVYDVMKQ  234 (256)
T ss_pred             CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence            21 1111223333322      22456666666666653 221      11122222222 2222223566889999999


Q ss_pred             cccCCCCCCCCHHHHHHHHHHH
Q 045682          283 CVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       283 Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      ||+.+|++|||+.++++.|+.+
T Consensus       235 ~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         235 CWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HhcCChhhCcCHHHHHHHHhcC
Confidence            9999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=7.8e-34  Score=248.57  Aligned_cols=246  Identities=17%  Similarity=0.241  Sum_probs=182.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CC--eEEEEEEecCC-CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QE--RLISVMKFDAS-KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|+..+.||+|+||.||+|..  ++  ..+++|.+... .....+.+.+|+.++.++ +||||+++++++...+..+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            5688889999999999999988  33  34788887753 234456789999999999 799999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          132 FEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      +||+++++|.+++......         ......+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence            9999999999998643210         012245899999999999999999999   9999999999999999999999


Q ss_pred             EEeecccccccCCC-ccccc--ccccccccc------ccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCC
Q 045682          203 KLFDFSFSISIPEG-ELLTG--LRAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSC  266 (309)
Q Consensus       203 kl~Dfg~a~~~~~~-~~~~g--~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~  266 (309)
                      ||+|||++...... ....+  ...+.+++.      ....+.|+++..++.++. +...      .++......+.. .
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~-~  237 (297)
T cd05089         159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-M  237 (297)
T ss_pred             EECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC-C
Confidence            99999998643221 01111  112333332      223456677767776653 3211      112222222221 1


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..+...+..+.+|+.+||+.+|.+|||+.++++.|+++...
T Consensus       238 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         238 EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            12234567899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3.6e-34  Score=248.53  Aligned_cols=239  Identities=18%  Similarity=0.240  Sum_probs=179.5

Q ss_pred             cCCCccCceeecCCeEEEEEEeC------CeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeee--CCce
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIP  128 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~  128 (309)
                      ..|...+.||+|+||.||+|.++      +..+|+|.+...... ....|.+|+.+++.++||||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            34666788999999999999972      578999998776543 46789999999999999999999999877  5578


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      +++|||+++++|.+++..      ....+++..+..++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||
T Consensus        84 ~lv~e~~~~~~l~~~l~~------~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg  154 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQR------HRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFG  154 (284)
T ss_pred             EEEEecCCCCCHHHHHHh------CccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccc
Confidence            999999999999999862      2336999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCcc-c------ccccccccccc------ccCCCcccHHHHHHHHhhcccccc-----c---------------
Q 045682          209 FSISIPEGEL-L------TGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNE-----I---------------  255 (309)
Q Consensus       209 ~a~~~~~~~~-~------~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~---------------  255 (309)
                      ++........ .      .+...+..++.      ....+.|+++..+++++.+.....     .               
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd05038         155 LAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR  234 (284)
T ss_pred             cccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH
Confidence            9987653211 1      11111222221      123456666666666654322110     0               


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      +...+........+..++.++.+|+.+||+.+|.+|||+.+|+++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~  284 (284)
T cd05038         235 LLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR  284 (284)
T ss_pred             HHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence            00011111112222345678999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-34  Score=244.99  Aligned_cols=232  Identities=19%  Similarity=0.281  Sum_probs=176.7

Q ss_pred             CCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +|+..+.||+|+||.||+|.+ .+..+|+|.+.... .....+.+|+.++..++||||+++++++...+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            467788899999999999998 66689999886543 2345688999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      ++|.+++..      ....+++..++.++.|++.||+|||   +.+++|+||||+||+++.++.+||+|||+++......
T Consensus        84 ~~L~~~l~~------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~  154 (256)
T cd05059          84 GCLLNYLRE------RKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ  154 (256)
T ss_pred             CCHHHHHHh------cccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence            999999852      2346899999999999999999999   8999999999999999999999999999987654432


Q ss_pred             cccc-----ccccccccccc------CCCcccHHHHHHHHhhc-cc------ccccccccccCCCCCCchHHHHHHHHHH
Q 045682          218 LLTG-----LRAFDLARLNE------DDGYVALRDHVKKYFEE-DR------LNEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       218 ~~~g-----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..+.     ...+.+++...      ..+.|+++..++.++.. ..      ..+.......+... ..+...+.++.++
T Consensus       155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  233 (256)
T cd05059         155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL-YRPKLAPTEVYTI  233 (256)
T ss_pred             ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHH
Confidence            2111     11233333221      23556666666665542 11      11222222222111 1223467889999


Q ss_pred             HHHcccCCCCCCCCHHHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      +.+||+.+|++|||+.++++.|
T Consensus       234 i~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         234 MYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHhcCChhhCcCHHHHHHHh
Confidence            9999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=5.4e-34  Score=244.33  Aligned_cols=228  Identities=18%  Similarity=0.271  Sum_probs=174.6

Q ss_pred             ceeecCCeEEEEEEe----CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           65 VIMKRSFYTLYKGFC----QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      .||+|+||.||+|.+    ++..+|+|.+....  ....+.+.+|+.+++.++||||++++|++.. ...++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            589999999999976    56889999986543  2345678999999999999999999998864 5678999999999


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCcc
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL  218 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~  218 (309)
                      +|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++........
T Consensus        81 ~L~~~l~-------~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~  150 (257)
T cd05116          81 PLNKFLQ-------KNKHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN  150 (257)
T ss_pred             cHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCC
Confidence            9999986       4457899999999999999999999   99999999999999999999999999999976643321


Q ss_pred             -----ccc--cccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHHH
Q 045682          219 -----LTG--LRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       219 -----~~g--~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                           ..+  ...+.+++..      ...+.|+++..+++++. +...      .++...+..+..+ ..+...+.++.+
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~  229 (257)
T cd05116         151 YYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM-ECPQRCPPEMYD  229 (257)
T ss_pred             eeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC-CCCCCCCHHHHH
Confidence                 111  1223333321      13456667767676653 3221      1222233333322 223356788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      ++.+||+.||.+||++.+|++.|++.
T Consensus       230 li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         230 LMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHhccCchhCcCHHHHHHHHhcc
Confidence            99999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=3.1e-34  Score=254.59  Aligned_cols=224  Identities=14%  Similarity=0.177  Sum_probs=178.0

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      +.||+|+||.||++..  +++.||+|.+....   ......+.+|+.+++.++||||+++++++..++..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999999998  78999999987542   234467889999999999999999999999999999999999999


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC--
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG--  216 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--  216 (309)
                      +|.+++.       ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        81 ~L~~~l~-------~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~  150 (328)
T cd05593          81 ELFFHLS-------RERVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA  150 (328)
T ss_pred             CHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc
Confidence            9999986       4567999999999999999999999   999999999999999999999999999998754221  


Q ss_pred             --cccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHHH
Q 045682          217 --ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       217 --~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~~  282 (309)
                        ....|...|.+|+...      ..+.|+++..++.++.+...      .+.......+....  +...+.++.+++.+
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~li~~  228 (328)
T cd05593         151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKF--PRTLSADAKSLLSG  228 (328)
T ss_pred             ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccC--CCCCCHHHHHHHHH
Confidence              1234666666665432      34678888888877655432      12223333232221  23456789999999


Q ss_pred             cccCCCCCCC-----CHHHHHH
Q 045682          283 CVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       283 Cl~~~P~~RP-----t~~~l~~  299 (309)
                      ||+.||.+||     ++.++++
T Consensus       229 ~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         229 LLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             HcCCCHHHcCCCCCCCHHHHhc
Confidence            9999999997     8888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=4e-34  Score=250.00  Aligned_cols=243  Identities=15%  Similarity=0.175  Sum_probs=180.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEeCC------------------eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCccee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQE------------------RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFK  117 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~~------------------~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~  117 (309)
                      .++|+..+.||+|+||.||+|.+..                  ..||+|.+.... ......+.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4568889999999999999998721                  458999987653 344577899999999999999999


Q ss_pred             eeeeeeeCCceEEEEEeccCCChhhhhhhhCCC----CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNP----QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       118 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      +++++..++..+++|||+++++|.+++......    ......+++..++.++.|++.||+|||   +.+++|+||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence            999999999999999999999999998633210    012236899999999999999999999   9999999999999


Q ss_pred             eeecCCCcEEEeecccccccCCCcc------cccccccccccc------ccCCCcccHHHHHHHHhhc--c-c-----cc
Q 045682          194 ILFNEENVAKLFDFSFSISIPEGEL------LTGLRAFDLARL------NEDDGYVALRDHVKKYFEE--D-R-----LN  253 (309)
Q Consensus       194 ill~~~~~~kl~Dfg~a~~~~~~~~------~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~-~-----~~  253 (309)
                      |+++.++.++|+|||++........      ..+...+.+++.      ....+.|+++..++.++..  . .     ..
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ  240 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence            9999999999999999876533221      111222333332      2235677777777766531  1 1     11


Q ss_pred             ccccccccC------CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          254 EIIDPLIMG------DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       254 ~~~~~~~~g------~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      +++......      ......+...+.++.+++.+||+.+|.+|||+.+|++.|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         241 QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            111111110      0011112234578999999999999999999999998885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=7.5e-34  Score=244.80  Aligned_cols=237  Identities=19%  Similarity=0.260  Sum_probs=179.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CC---eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QE---RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...+.||+|+||.||+|.+  ++   ..+|+|.+.... ......+.+|+.++.+++||||+++++++..++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            4577788999999999999987  22   379999986543 33456789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++..      ....+++.+++.++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||++.
T Consensus        84 ~e~~~~~~L~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~  154 (267)
T cd05066          84 TEYMENGSLDAFLRK------HDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (267)
T ss_pred             EEcCCCCCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccc
Confidence            999999999999862      2356899999999999999999999   9999999999999999999999999999998


Q ss_pred             ccCCCcc--c--c-c--ccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          212 SIPEGEL--L--T-G--LRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       212 ~~~~~~~--~--~-g--~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      .......  .  + +  ...+..++...      ..+.|+++..++.++. +...      .+..+....+.. .+.+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~  233 (267)
T cd05066         155 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-LPAPMD  233 (267)
T ss_pred             ccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc-CCCCCC
Confidence            7643221  1  1 1  11233333221      2355566655555442 2211      122222222222 222234


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .+..+.+++.+||+.+|.+|||+.++++.|+++
T Consensus       234 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         234 CPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.9e-34  Score=256.93  Aligned_cols=230  Identities=16%  Similarity=0.209  Sum_probs=182.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--C-CeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--Q-ERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|+..+.||+|+||.||+|.+  + +..||+|.+...   .......+.+|+.++..++||||+++++++.+++..++|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            5688889999999999999987  2 368999998643   223446788999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.
T Consensus       110 ~Ey~~~g~L~~~i~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~  179 (340)
T PTZ00426        110 LEFVIGGEFFTFLR-------RNKRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAK  179 (340)
T ss_pred             EeCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence            99999999999986       4567899999999999999999999   9999999999999999999999999999998


Q ss_pred             ccCCCc-cccccccccccccc------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHH
Q 045682          212 SIPEGE-LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       212 ~~~~~~-~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ...... ...|...|.+|+..      ...+.|+++..++.++.+....      .....+..+....  +...+..+.+
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~  257 (340)
T PTZ00426        180 VVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYF--PKFLDNNCKH  257 (340)
T ss_pred             ecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCHHHHH
Confidence            764432 34456556665542      2346788888888776554321      1222333333221  2234567899


Q ss_pred             HHHHcccCCCCCCC-----CHHHHHH
Q 045682          279 LIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      ++..||+.+|.+|+     |+.++++
T Consensus       258 li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        258 LMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             HHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            99999999999995     7888764

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-35  Score=269.39  Aligned_cols=237  Identities=19%  Similarity=0.304  Sum_probs=200.4

Q ss_pred             CCccCceeecCCeEEEEEEe--CC----eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QE----RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ....++||.|+||+||+|.|  .+    -+||+|.+.... .....++++|+-+|.+++|||+++++|+|.... +.||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            44577899999999999999  44    468999886653 455688999999999999999999999998866 88999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      +|++.|+|.+|++.+      ...+.....+.|..|||+||.|||   ..++|||||.++||||.+-..+||.|||+++.
T Consensus       777 q~mP~G~LlDyvr~h------r~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~l  847 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREH------RDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKL  847 (1177)
T ss_pred             HhcccchHHHHHHHh------hccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhc
Confidence            999999999999854      567888899999999999999999   99999999999999999999999999999999


Q ss_pred             cCCCc----ccccccccc--------ccccccCCCcccHHHHHHHH-------hhcccccccccccccCCCCCCchHHHH
Q 045682          213 IPEGE----LLTGLRAFD--------LARLNEDDGYVALRDHVKKY-------FEEDRLNEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      ...++    .-.|+.|+.        .......+++|+++..+|+.       +.+.+..++-|-+..|+...+++ .++
T Consensus       848 l~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPp-iCt  926 (1177)
T KOG1025|consen  848 LAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPP-ICT  926 (1177)
T ss_pred             cCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCC-Ccc
Confidence            87654    233444432        22344466899999999988       34556778888888888855544 888


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      -.++.++.+||..|++.||+|+++.+++.++.+.
T Consensus       927 iDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  927 IDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             HHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999888754

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=9.2e-34  Score=250.04  Aligned_cols=248  Identities=19%  Similarity=0.304  Sum_probs=186.6

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe---------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC---------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~---------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      ..++|...+.||+|+||.||+|..         ....+|+|.+.... ......+.+|+.++.++ +||||+++++++..
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            446688889999999999999975         23568999887543 34456788999999999 69999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCee
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL  195 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nil  195 (309)
                      .+..+++|||+++|+|.+++......         ......+++.++..++.|++.||.|||   +.+++|+||||+||+
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nil  166 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVL  166 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEE
Confidence            89999999999999999998643210         112346899999999999999999999   999999999999999


Q ss_pred             ecCCCcEEEeecccccccCCCc----ccccc--cccccccc------ccCCCcccHHHHHHHHhh-ccc------ccccc
Q 045682          196 FNEENVAKLFDFSFSISIPEGE----LLTGL--RAFDLARL------NEDDGYVALRDHVKKYFE-EDR------LNEII  256 (309)
Q Consensus       196 l~~~~~~kl~Dfg~a~~~~~~~----~~~g~--~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~------~~~~~  256 (309)
                      ++.++.+||+|||+++......    ...+.  ..+.+++.      ....+.|+++..++.++. +..      ..++.
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~  246 (314)
T cd05099         167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF  246 (314)
T ss_pred             EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999999999999998664321    11121  22333432      223467777777777654 221      11222


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .....+.. ...+..++.++.+++.+||+.+|++|||+.++++.|.++...
T Consensus       247 ~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~  296 (314)
T cd05099         247 KLLREGHR-MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA  296 (314)
T ss_pred             HHHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence            22222221 112235567899999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.1e-34  Score=255.10  Aligned_cols=224  Identities=16%  Similarity=0.172  Sum_probs=175.7

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      +.||+|+||.||++..  ++..||+|.+...   .......+.+|+.++..++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            3699999999999998  7899999998653   2234456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC--
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG--  216 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--  216 (309)
                      +|..++.       ....+++..+..++.||+.||.|||   +.+++||||||+|||++.++.+||+|||++......  
T Consensus        81 ~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  150 (323)
T cd05595          81 ELFFHLS-------RERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             cHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC
Confidence            9999886       4557899999999999999999999   999999999999999999999999999998754221  


Q ss_pred             --cccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHHHHH
Q 045682          217 --ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       217 --~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~~  282 (309)
                        ....|...|.+++...      ..+.|+++..++.++.+....      +.......+...  .+...+.++.+++.+
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~li~~  228 (323)
T cd05595         151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAG  228 (323)
T ss_pred             ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHH
Confidence              1234556666665432      246677777777776543221      122222222222  123456789999999


Q ss_pred             cccCCCCCCC-----CHHHHHH
Q 045682          283 CVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       283 Cl~~~P~~RP-----t~~~l~~  299 (309)
                      ||+.||.+||     ++.++++
T Consensus       229 ~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         229 LLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HccCCHHHhCCCCCCCHHHHHc
Confidence            9999999998     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=6.9e-34  Score=246.63  Aligned_cols=247  Identities=15%  Similarity=0.200  Sum_probs=186.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-C-----CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeee-CCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-Q-----ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLE-TQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~  128 (309)
                      .++|...+.||+|+||.||+|.+ .     +..|++|.+.... ......+.+|+.++..++||||+++++++.. +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            46688889999999999999998 4     5889999887543 3445678899999999999999999998876 5678


Q ss_pred             EEEEEeccCCChhhhhhhhCCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          129 ILVFEYINCGSLADRIRIQHNP-QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~-~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      ++++||+++|+|.+++...... ......+++..++.++.|++.||.|||   +.+++|+||||+||++++++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence            9999999999999998643211 112256899999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCcc------cccccccccccc------ccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCc
Q 045682          208 SFSISIPEGEL------LTGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSG  268 (309)
Q Consensus       208 g~a~~~~~~~~------~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~  268 (309)
                      |+++.......      ..+...+.+++.      ....+.|+++..+|+++. +...      .++......+ .....
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~  240 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-YRLAQ  240 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-CCCCC
Confidence            99986543221      112223333332      223456777777777664 3221      1111111222 22222


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +..+++++.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus       241 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         241 PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            335568899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=3.5e-34  Score=251.91  Aligned_cols=249  Identities=17%  Similarity=0.274  Sum_probs=186.9

Q ss_pred             HhcCCCccCceeecCCeEEEEEEeC---------CeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFCQ---------ERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      ..++|...+.||+|+||.||++.+.         ...+|+|.+.... ......+.+|+.++..+ +||||+++++++..
T Consensus        16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (307)
T cd05098          16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   95 (307)
T ss_pred             ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            3467889999999999999999862         2469999987642 34456788999999999 89999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCee
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQ---------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL  195 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nil  195 (309)
                      .+..++||||+++|+|.+++.......         .....+++.+++.++.|++.||+|||   +.+++|+||||+||+
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nil  172 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVL  172 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheE
Confidence            999999999999999999986432110         12346899999999999999999999   999999999999999


Q ss_pred             ecCCCcEEEeecccccccCCCcc----ccc--cccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccc
Q 045682          196 FNEENVAKLFDFSFSISIPEGEL----LTG--LRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEII  256 (309)
Q Consensus       196 l~~~~~~kl~Dfg~a~~~~~~~~----~~g--~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~  256 (309)
                      ++.++.+||+|||++........    ..+  ...+.+|+..      ...+.|+++..++.++. +..      ..++.
T Consensus       173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~  252 (307)
T cd05098         173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF  252 (307)
T ss_pred             EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence            99999999999999876543221    111  1233344322      12355666666666653 221      12222


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .....+. ....+...+.++.+|+.+||+.+|.+|||+.+|++.|+++....
T Consensus       253 ~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~  303 (307)
T cd05098         253 KLLKEGH-RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT  303 (307)
T ss_pred             HHHHcCC-CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence            2222222 22223355688999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=5.1e-34  Score=247.89  Aligned_cols=242  Identities=19%  Similarity=0.266  Sum_probs=180.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .+|+..+.||+|+||.||+|.+      .+..|++|.+.... ......+.+|+.+++.++||||+++++++..+...++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4577788999999999999985      34789999987543 3344678899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCC----------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC
Q 045682          131 VFEYINCGSLADRIRIQHN----------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN  200 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~----------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~  200 (309)
                      ||||+++++|.+++.....          .......+++.++..++.|++.||.|||   +.+++|+||||+||+++.++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence            9999999999999852210          0011345889999999999999999999   89999999999999999999


Q ss_pred             cEEEeecccccccCCCc------ccccccccccccc------ccCCCcccHHHHHHHHhh-cccc------ccccccccc
Q 045682          201 VAKLFDFSFSISIPEGE------LLTGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIM  261 (309)
Q Consensus       201 ~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~  261 (309)
                      .+||+|||+++......      ...+...+.+++.      ....+.|+++..+++++. +...      .++......
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  241 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK  241 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            99999999997653322      1112222333332      223466777777777664 3211      122222222


Q ss_pred             CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          262 GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       262 g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      +... ..+..++..+.+++.+||+.+|.+||++.+|.+.|..
T Consensus       242 ~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         242 RQLL-PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             CCcC-CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            2221 2223556889999999999999999999999988863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=6.2e-34  Score=243.81  Aligned_cols=226  Identities=19%  Similarity=0.281  Sum_probs=170.1

Q ss_pred             CceeecCCeEEEEEEe--CC----------eEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           64 KVIMKRSFYTLYKGFC--QE----------RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      +.||+|+||.||+|.+  ++          ..+++|.+...... ...+.+|+.+++.++||||+++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            3689999999999999  23          24788877655433 6789999999999999999999999988 778999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-------cEEE
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-------VAKL  204 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-------~~kl  204 (309)
                      |||+++|+|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++       .+||
T Consensus        79 ~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl  149 (259)
T cd05037          79 EEYVKFGPLDVFLHR------EKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKL  149 (259)
T ss_pred             EEcCCCCcHHHHHHh------hccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEe
Confidence            999999999999862      1227899999999999999999999   99999999999999999888       8999


Q ss_pred             eecccccccCCCccccccccccccccccC--------CCcccHHHHHHHHhhc-ccccccccc-----cccCCCCCCchH
Q 045682          205 FDFSFSISIPEGELLTGLRAFDLARLNED--------DGYVALRDHVKKYFEE-DRLNEIIDP-----LIMGDRSCSGKE  270 (309)
Q Consensus       205 ~Dfg~a~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~g~~~~~~~~  270 (309)
                      +|||++..........+..++.+++....        .+.|+++..+|.++.+ .......+.     ........+  .
T Consensus       150 ~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~--~  227 (259)
T cd05037         150 SDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLP--M  227 (259)
T ss_pred             CCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCC--C
Confidence            99999988665555555556655554322        3445556566665442 111111100     000000001  1


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      .....+.+++.+||..+|.+|||+.+|++.|+
T Consensus       228 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         228 PDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            11278999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=9.1e-34  Score=243.04  Aligned_cols=229  Identities=15%  Similarity=0.258  Sum_probs=173.2

Q ss_pred             ceeecCCeEEEEEEe----CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           65 VIMKRSFYTLYKGFC----QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      .||+|+||.||+|.+    .+..||+|.+.... ....+.+.+|+.++++++||||+++++++.. ...++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence            389999999999987    34569999987653 2334678999999999999999999998864 56899999999999


Q ss_pred             hhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCcc-
Q 045682          140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL-  218 (309)
Q Consensus       140 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-  218 (309)
                      |.+++..      ....+++..++.++.|++.||.|||   ..+++|+||||+||+++.++.+||+|||++........ 
T Consensus        81 L~~~l~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~  151 (257)
T cd05115          81 LNKFLSG------KKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY  151 (257)
T ss_pred             HHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccc
Confidence            9999851      2457899999999999999999999   89999999999999999999999999999875533221 


Q ss_pred             ----cccc--cccccccc------ccCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHHHHHH
Q 045682          219 ----LTGL--RAFDLARL------NEDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       219 ----~~g~--~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                          ..+.  ..+.+|+.      ....+.|+++..++.++. +....      ++......+.. ...+..++.++.++
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l  230 (257)
T cd05115         152 YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR-LDCPAECPPEMYAL  230 (257)
T ss_pred             eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-CCCCCCCCHHHHHH
Confidence                1111  12333332      223466777777777653 32211      12222222222 22233567889999


Q ss_pred             HHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      +.+||+.+|++||++.+|.+.|+.+
T Consensus       231 i~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         231 MKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHcCCChhhCcCHHHHHHHHhhh
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=5.8e-34  Score=245.70  Aligned_cols=236  Identities=17%  Similarity=0.258  Sum_probs=179.5

Q ss_pred             CCCccCceeecCCeEEEEEEe--CC---eEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QE---RLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .|...+.||+|+||.||+|.+  ++   ..||+|.+... .......|..|+.+++.++||||+++++++..+...++||
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            467788999999999999998  33   36999998764 3344578999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++..      ....+++.+++.++.|++.||+|||   +.+++|+||||+||+++.++.+||+|||++..
T Consensus        85 e~~~~~~L~~~l~~------~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~  155 (269)
T cd05065          85 EFMENGALDSFLRQ------NDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRF  155 (269)
T ss_pred             ecCCCCcHHHHHhh------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccc
Confidence            99999999999862      2356899999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCcc-------cccc--ccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchH
Q 045682          213 IPEGEL-------LTGL--RAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       213 ~~~~~~-------~~g~--~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~  270 (309)
                      ......       ..+.  ..+..++..      ...+.|+++..+++++. +...      .++..... ...+.+.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~  234 (269)
T cd05065         156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-QDYRLPPPM  234 (269)
T ss_pred             cccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCcCCCcc
Confidence            533210       1111  112233322      23466777777776542 2211      11122221 122222233


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .++..+.+++.+||+.+|.+||++.+|+..|+++
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         235 DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            5677899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=8.9e-34  Score=249.49  Aligned_cols=233  Identities=14%  Similarity=0.187  Sum_probs=176.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|+..+.||+|+||.||++.+  ++..+|+|.+... ......++.+|++++.+++||||+++++++..++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3688889999999999999998  6788999988754 233446688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      +++++|.+++.       ....+++..+..++.|++.||.|||   + .+++|+||+|+|||++.++.+||+|||++...
T Consensus        81 ~~~~~L~~~l~-------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  150 (308)
T cd06615          81 MDGGSLDQVLK-------KAGRIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  150 (308)
T ss_pred             cCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCcccc
Confidence            99999999986       4467899999999999999999999   6 58999999999999999999999999998765


Q ss_pred             CCC--cccccccccccccccc------CCCcccHHHHHHHHhhcccccc---------cccc------------------
Q 045682          214 PEG--ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE---------IIDP------------------  258 (309)
Q Consensus       214 ~~~--~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~------------------  258 (309)
                      ...  ....|...+.+++...      ..+.|+++..++.++.+.....         .+..                  
T Consensus       151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (308)
T cd06615         151 IDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHP  230 (308)
T ss_pred             cccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCC
Confidence            332  1223444444444322      2356666666666654432110         0000                  


Q ss_pred             ---------------cccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          259 ---------------LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       259 ---------------~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                                     ......+..+....+.++.+++.+||+.+|++|||+.+|++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                           000000111111245679999999999999999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=7.7e-34  Score=244.71  Aligned_cols=238  Identities=17%  Similarity=0.273  Sum_probs=180.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CC---eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QE---RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .++|+..+.||+|+||.||+|..  ++   ..+++|.+.... ......+.+|+.++.+++||||+++.+++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            35678889999999999999998  33   379999986652 3445678999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++++|.+++..      ....+++..+..++.|++.|++|||   +.+++|+||||+||+++.++.+||+|||++
T Consensus        84 v~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~  154 (268)
T cd05063          84 ITEYMENGALDKYLRD------HDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLS  154 (268)
T ss_pred             EEEcCCCCCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccc
Confidence            9999999999999852      2356899999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCcc--cc---cc--ccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchH
Q 045682          211 ISIPEGEL--LT---GL--RAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       211 ~~~~~~~~--~~---g~--~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~  270 (309)
                      ........  .+   +.  ..+.+++..      ...+.|+++..++.++. +...      .++...+..+. ..+.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~  233 (268)
T cd05063         155 RVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-RLPAPM  233 (268)
T ss_pred             eecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-CCCCCC
Confidence            76543221  11   11  113333321      12355666666665443 2211      12222222222 222223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      ..+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       234 ~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         234 DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            5567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=8.7e-34  Score=245.94  Aligned_cols=238  Identities=18%  Similarity=0.241  Sum_probs=179.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe----EEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER----LISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .+|+..+.||+|+||+||+|.+  ++.    .||+|.+.... ......+.+|+.++..+.||||+++++++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence            4577888999999999999987  554    48999987643 33456788999999999999999999999764 5789


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ++||+++|+|.+++..      ....+++..++.++.|++.||+|||   +.+++||||||+|||+++++.+||+|||++
T Consensus        86 ~~~~~~~g~l~~~l~~------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~  156 (279)
T cd05109          86 VTQLMPYGCLLDYVRE------NKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLA  156 (279)
T ss_pred             EEEcCCCCCHHHHHhh------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCce
Confidence            9999999999999851      2456899999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCcc---c---ccccccccccccc------CCCcccHHHHHHHHhh-cccccc------cccccccCCCCCCchHH
Q 045682          211 ISIPEGEL---L---TGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRLNE------IIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~~---~---~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~g~~~~~~~~~  271 (309)
                      +.......   .   .+...+.+++...      ..+.|+++..+++++. +.....      +......+... ..+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~  235 (279)
T cd05109         157 RLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL-PQPPI  235 (279)
T ss_pred             eecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC-CCCcc
Confidence            87643221   1   1112233333221      2356666666666543 222111      11111222222 22235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ++.++.+++..||+.||+.||++.++++.|+.+..
T Consensus       236 ~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         236 CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            67789999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=8.5e-34  Score=244.52  Aligned_cols=238  Identities=19%  Similarity=0.217  Sum_probs=181.5

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++..++++.....||+|+||.||+|.+  ++..|++|.+........+.+.+|+.+++.++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            345566777778899999999999998  678899999877665666789999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-CCcEEEeec
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPL--LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLFDF  207 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l--~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Df  207 (309)
                      |+||+++++|.+++..      ....+  ++..+..++.|++.||+|||   +.+++|+||||+||+++. ++.++|+||
T Consensus        83 v~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~df  153 (268)
T cd06624          83 FMEQVPGGSLSALLRS------KWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDF  153 (268)
T ss_pred             EEecCCCCCHHHHHHH------hcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecc
Confidence            9999999999999862      12344  78888999999999999999   999999999999999976 679999999


Q ss_pred             ccccccCCC----ccccccccccccccc--------cCCCcccHHHHHHHHhhccccccccc-------ccccCCCCCCc
Q 045682          208 SFSISIPEG----ELLTGLRAFDLARLN--------EDDGYVALRDHVKKYFEEDRLNEIID-------PLIMGDRSCSG  268 (309)
Q Consensus       208 g~a~~~~~~----~~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~  268 (309)
                      |++......    ....|...+.+++..        ...+.|+++..++.++.+.......+       ...........
T Consensus       154 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  233 (268)
T cd06624         154 GTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEI  233 (268)
T ss_pred             hhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCC
Confidence            998765321    122344444444422        23466777777777765443221111       00000111112


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +...+.++.+++.+||+.+|.+|||+.++++
T Consensus       234 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         234 PESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            2355678999999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.4e-34  Score=255.44  Aligned_cols=227  Identities=15%  Similarity=0.137  Sum_probs=180.3

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ..++|+..+.||+|+||.||.|+-  +|..+|+|++++..   ....+.+..|=.+|...++|+||+|+-.|++...+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            558899999999999999999988  89999999998753   3455678889999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||++||++..+|.       ..+.|++..+..++.+++-|+.-+|   ..|+|||||||+|+|||..|++||+||||+
T Consensus       219 iMEylPGGD~mTLL~-------~~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs  288 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLM-------RKDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLS  288 (550)
T ss_pred             EEEecCCccHHHHHH-------hcCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeecccccc
Confidence            999999999999997       7789999999999999999999999   999999999999999999999999999998


Q ss_pred             cccCCCc---------------------------------------------------cccccccccccccccCC-----
Q 045682          211 ISIPEGE---------------------------------------------------LLTGLRAFDLARLNEDD-----  234 (309)
Q Consensus       211 ~~~~~~~---------------------------------------------------~~~g~~~~~~~~~~~~~-----  234 (309)
                      .......                                                   .+.|.+-|.+|+...+.     
T Consensus       289 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~  368 (550)
T KOG0605|consen  289 TGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKE  368 (550)
T ss_pred             chhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcc
Confidence            5442210                                                   34466666666654433     


Q ss_pred             -CcccHHHHHHHHhhccc------ccccccccccCC--CCCCchHHHHHHHHHHHHHcccCCCCCCCC
Q 045682          235 -GYVALRDHVKKYFEEDR------LNEIIDPLIMGD--RSCSGKEQQLQAYAHLIFECVNESPVDRPT  293 (309)
Q Consensus       235 -~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~--~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt  293 (309)
                       ++|+++..+++++-+.+      ..+....+....  ..++.....+.+..+||.+|+. ||+.|.-
T Consensus       369 cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  369 CDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence             35666666655544332      223333332222  2233334556889999999999 9999964

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.6e-34  Score=243.28  Aligned_cols=232  Identities=18%  Similarity=0.214  Sum_probs=181.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-----chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-----PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++|...+.||+|++|.||.|..  +++.+++|.+....     ......+.+|+.++.+++||||+++++++..+...++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5688899999999999999987  68999999876532     1223568899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |+||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++
T Consensus        82 v~e~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~  151 (263)
T cd06625          82 FMEYMPGGSVKDQLK-------AYGALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGAS  151 (263)
T ss_pred             EEEECCCCcHHHHHH-------HhCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence            999999999999986       4456899999999999999999999   999999999999999999999999999998


Q ss_pred             cccCCCc-------cccccccccccccc------cCCCcccHHHHHHHHhhccccccc------ccccccCCCCCCchHH
Q 045682          211 ISIPEGE-------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~-------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~~  271 (309)
                      .......       ...|...+.+++..      ...+.|+++..+|.++.+.....-      .............+..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
T cd06625         152 KRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSH  231 (263)
T ss_pred             eeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCcc
Confidence            7653321       12233344444432      234677777777777765432111      1111111222223335


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+..+.+++.+||+.+|.+|||+.++++
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         232 VSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             CCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence            6678999999999999999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-35  Score=254.66  Aligned_cols=232  Identities=19%  Similarity=0.253  Sum_probs=190.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ..|...+.||+|+||.||+|.+  +++.||+|.+.... ......+.+|+.+|.+++++||.++||.+..+...+++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            4477778999999999999999  78999999998764 34457789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      |.+|++.+.|+       ....+++..+.-++.++..|+.|||   ..+.+|||||+.|||+..+|.||++|||.+-...
T Consensus        93 ~~gGsv~~lL~-------~~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~  162 (467)
T KOG0201|consen   93 CGGGSVLDLLK-------SGNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLT  162 (467)
T ss_pred             hcCcchhhhhc-------cCCCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeee
Confidence            99999999997       5555688888889999999999999   9999999999999999999999999999998775


Q ss_pred             CCc----cccccccccccccccC------CCcccHHHHHHHHhhcccccccccc-----cccCCCCCCchHHHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIIDP-----LIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ...    .+.|++-|.+|+.-..      .+.|+++.++.++..+.+...-+++     .+....|+.....++..+.++
T Consensus       163 ~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEF  242 (467)
T KOG0201|consen  163 NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEF  242 (467)
T ss_pred             chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHH
Confidence            543    5667777787776542      2445666666666665544332222     122344555555788889999


Q ss_pred             HHHcccCCCCCCCCHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +..||++||+.|||+.++++
T Consensus       243 V~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  243 VEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             HHHHhhcCcccCcCHHHHhh
Confidence            99999999999999999984

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.5e-34  Score=247.25  Aligned_cols=242  Identities=19%  Similarity=0.259  Sum_probs=182.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .++|.....||+|+||.||+|.+.       +..||+|.+.... ......+.+|+.++..++||||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            456888899999999999999872       2679999986553 34446788999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCC---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQ---PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ++||||+++|+|.+++.......   .....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence            99999999999999986332111   12345789999999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCCcc------cccccccccccc------ccCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCC
Q 045682          206 DFSFSISIPEGEL------LTGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSC  266 (309)
Q Consensus       206 Dfg~a~~~~~~~~------~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~  266 (309)
                      |||+++.......      ..+...+.+|+.      ....+.|+++..++.++. +..      ..+.......+... 
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-  240 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL-  240 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCC-
Confidence            9999876543321      111222333332      223466777777776654 221      11222222222222 


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ..+..++.++.+++.+||+.+|++|||+.+|++.|+
T Consensus       241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            222345788999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=5.4e-34  Score=254.58  Aligned_cols=248  Identities=17%  Similarity=0.247  Sum_probs=180.7

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeee-C
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLE-T  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~-~  125 (309)
                      ..++|...+.||+|+||.||+|.+       +++.||||.+.... ......+.+|+.++.++ +||||+++++++.. +
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            446788899999999999999974       45789999997643 23446788999999999 78999999998865 4


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCC------------------------------------------------------
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQ------------------------------------------------------  151 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------------------  151 (309)
                      ...+++|||+++|+|.+++.......                                                      
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            56789999999999999985321100                                                      


Q ss_pred             ------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCcc--c----
Q 045682          152 ------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL--L----  219 (309)
Q Consensus       152 ------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~----  219 (309)
                            .....+++..+..++.|++.||+|||   +.+|+||||||+||+++.++.+||+|||++........  .    
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  241 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA  241 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence                  01134788899999999999999999   99999999999999999999999999999876532211  1    


Q ss_pred             cccccccccccc------cCCCcccHHHHHHHHhh-ccccc-------ccccccccCCCCCCchHHHHHHHHHHHHHccc
Q 045682          220 TGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRLN-------EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVN  285 (309)
Q Consensus       220 ~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~  285 (309)
                      .+...+.+++..      ...+.|+++..++.++. +....       ........+... ..+...++++.+++.+||+
T Consensus       242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~cl~  320 (343)
T cd05103         242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-RAPDYTTPEMYQTMLDCWH  320 (343)
T ss_pred             CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC-CCCCCCCHHHHHHHHHHcc
Confidence            111223333322      22356666666666653 22111       111111122221 1122345679999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHh
Q 045682          286 ESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       286 ~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+|.+|||+.+|++.|+.+...
T Consensus       321 ~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         321 GEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             CChhhCcCHHHHHHHHHHHHhc
Confidence            9999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.1e-35  Score=257.03  Aligned_cols=234  Identities=20%  Similarity=0.264  Sum_probs=195.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc-eEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI-PILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-~~lv~  132 (309)
                      ++|...+.+|+|+||.++..++  ++..+++|++....  ....+...+|+.+++++.|||||.+.+.+..++. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            5688899999999999999888  77899999986653  3344567899999999999999999999999888 99999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      +||+||++.+.+...     .+..+++..+..++.|++.|+.|||   ++.|+|||||+.||+++.++.|||+|||+|+.
T Consensus        84 ~Y~eGg~l~~~i~~~-----k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~  155 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQ-----KGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKI  155 (426)
T ss_pred             eecCCCCHHHHHHHH-----hhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhh
Confidence            999999999999733     3567899999999999999999999   99999999999999999999999999999999


Q ss_pred             cCCCc----ccccccccccccccc------CCCcccHHHHHHHH------hhcccccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKY------FEEDRLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ..+..    ...|.+.+..++...      .++.|+++..++++      |.......++..+..+...+. +..++.++
T Consensus       156 l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl-p~~ys~el  234 (426)
T KOG0589|consen  156 LNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL-PSMYSSEL  234 (426)
T ss_pred             cCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC-CccccHHH
Confidence            87664    455666666665543      34556666666655      555566677777777774443 45888999


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ..|+..|++.+|..||++.+++.+
T Consensus       235 ~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  235 RSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHHHhhcCCccCCCHHHHhhC
Confidence            999999999999999999999876

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.6e-34  Score=254.98  Aligned_cols=230  Identities=17%  Similarity=0.173  Sum_probs=169.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-----ceE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-----IPI  129 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~  129 (309)
                      .|+..+.||+|+||.||+|+.  ++..||+|++...  .......+.+|+.+++.++||||+++++++....     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            377788999999999999998  7899999998653  2234457889999999999999999999886432     479


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+. ++|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        81 lv~e~~~-~~L~~~l~-------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~  149 (338)
T cd07859          81 VVFELME-SDLHQVIK-------ANDDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGL  149 (338)
T ss_pred             EEEecCC-CCHHHHHH-------hcccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcc
Confidence            9999996 58999886       4557999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCc-------ccccccccccccccc--------CCCcccHHHHHHHHhhccccccccc-----------------
Q 045682          210 SISIPEGE-------LLTGLRAFDLARLNE--------DDGYVALRDHVKKYFEEDRLNEIID-----------------  257 (309)
Q Consensus       210 a~~~~~~~-------~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  257 (309)
                      ++......       ...|...+.+|+...        ..+.|+++..++.++.+.......+                 
T Consensus       150 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  229 (338)
T cd07859         150 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP  229 (338)
T ss_pred             ccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            97543211       123445555555322        2355666666666554432211000                 


Q ss_pred             ----cc-----------ccCCCCCCch---HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 ----PL-----------IMGDRSCSGK---EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 ----~~-----------~~g~~~~~~~---~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                          .+           .....+....   ...+..+.+++.+||+.||++|||+.++++
T Consensus       230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                00           0000000000   012456789999999999999999999984

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=8.1e-34  Score=243.56  Aligned_cols=236  Identities=17%  Similarity=0.244  Sum_probs=181.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .++|+..+.||+|+||.||+|.+ .+..+|+|.+..... ....+.+|+.++++++|+|++++++++. ....+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM   82 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence            45678888999999999999988 667899999876542 3467999999999999999999999875 45689999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++.....
T Consensus        83 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05070          83 SKGSLLDFLKDG-----EGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIED  154 (260)
T ss_pred             CCCcHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence            999999998621     2456899999999999999999999   89999999999999999999999999999976644


Q ss_pred             Cccc-----cccccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHHH
Q 045682          216 GELL-----TGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       216 ~~~~-----~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ....     .+...+.+|+..      ...+.|+++..++.++. +..      ..+..+....+.. .+.+...+..+.
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  233 (260)
T cd05070         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR-MPCPQDCPISLH  233 (260)
T ss_pred             cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCcCCHHHH
Confidence            3211     122233344322      23567777777777765 321      1222333322222 222335667899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      +|+.+||+.+|.+|||+.++.+.|++
T Consensus       234 ~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         234 ELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHhc
Confidence            99999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-35  Score=263.69  Aligned_cols=230  Identities=20%  Similarity=0.284  Sum_probs=193.3

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      |+....||-|+||.||-|++  +...||||++.-..   ......++.|+.+|.++.|||++.+-|||..+...||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            55667899999999999999  88999999986653   33456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      |-| |-.|.|.++      ..++-+..+..|..+.+.||+|||   +.+.||||||+.|||+++.|.|||+|||.|....
T Consensus       108 ClG-SAsDlleVh------kKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~  177 (948)
T KOG0577|consen  108 CLG-SASDLLEVH------KKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA  177 (948)
T ss_pred             Hhc-cHHHHHHHH------hccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcC
Confidence            975 889998766      468899999999999999999999   9999999999999999999999999999999998


Q ss_pred             CCccccccccccccccccCC---------CcccHHHHHHHHhhc------ccccccccccccCCCCCCchHHHHHHHHHH
Q 045682          215 EGELLTGLRAFDLARLNEDD---------GYVALRDHVKKYFEE------DRLNEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       215 ~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      +...+.|.+.|.+|+...+.         +.|+++.+--++...      .+....+..+...+.|....+.++..+.++
T Consensus       178 PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~F  257 (948)
T KOG0577|consen  178 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNF  257 (948)
T ss_pred             chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHH
Confidence            88889999999888754422         344544433333222      233445566666677777777999999999


Q ss_pred             HHHcccCCCCCCCCHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +..||++-|.+|||..+++.
T Consensus       258 vd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  258 VDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HHHHHhhCcccCCcHHHHhh
Confidence            99999999999999988764

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.2e-33  Score=245.70  Aligned_cols=236  Identities=17%  Similarity=0.206  Sum_probs=178.3

Q ss_pred             CCCccCceeecCCeEEEEEEe------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPI  129 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~  129 (309)
                      .|...+.||+|+||.||.+.+      ++..||+|.+.... ......+.+|+.+++.++||||+++++++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            467788999999999999974      46889999987553 34456799999999999999999999998775  5688


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++++|.+++..      ....+++..+..++.|++.||+|||   +++++|+||||+||+++.++.++|+|||+
T Consensus        85 lv~e~~~g~~L~~~l~~------~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~  155 (284)
T cd05079          85 LIMEFLPSGSLKEYLPR------NKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGL  155 (284)
T ss_pred             EEEEccCCCCHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcc
Confidence            99999999999999851      2346899999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCc-------ccccccccccccc------ccCCCcccHHHHHHHHhhccccc----c-c----------------
Q 045682          210 SISIPEGE-------LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLN----E-I----------------  255 (309)
Q Consensus       210 a~~~~~~~-------~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~-~----------------  255 (309)
                      +.......       ...+...+.+++.      ....+.|+++..++.++......    . .                
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd05079         156 TKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL  235 (284)
T ss_pred             ccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence            98654322       1222333333332      12346677776666665321100    0 0                


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      +.....+.. .+.+...+..+.+|+.+||+.+|.+|||+.++++.|+++
T Consensus       236 ~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         236 VRVLEEGKR-LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHHcCcc-CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            000001111 111234567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=8.3e-34  Score=245.42  Aligned_cols=242  Identities=17%  Similarity=0.258  Sum_probs=180.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++|+....||+|+||.||+|..       ....|++|.+...... ....+.+|+.++++++||||+++++++.+....+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            5688888999999999999996       2367999988765433 4577999999999999999999999999989999


Q ss_pred             EEEEeccCCChhhhhhhhCCC--CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          130 LVFEYINCGSLADRIRIQHNP--QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      +||||+++|+|.+++......  ......+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence            999999999999998632110  011236899999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCcc-----cccccccccccc------ccCCCcccHHHHHHHHhhcc--cc-----cccccccccCCCCCCch
Q 045682          208 SFSISIPEGEL-----LTGLRAFDLARL------NEDDGYVALRDHVKKYFEED--RL-----NEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       208 g~a~~~~~~~~-----~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~g~~~~~~~  269 (309)
                      |++........     ..+...+.+++.      ....+.|+++..++.++...  .+     ..++.....+......+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  241 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVP  241 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCC
Confidence            99875432221     111122333332      12245667776666665421  11     12222222233323223


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ...+..+.+++.+||+.+|.+|||+.+++..|.
T Consensus       242 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         242 EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            355678999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=6.8e-34  Score=243.19  Aligned_cols=234  Identities=18%  Similarity=0.279  Sum_probs=178.1

Q ss_pred             cCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      ++|...+.||+|+||.||++..+++.||+|.+....  ....+.+|+.++..++|||++++++++..++ .+++|||+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~~   82 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMSK   82 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCCC
Confidence            457888999999999999999899999999986542  3467899999999999999999999987654 7999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      ++|.+++...     ....+++..++.++.|++.|+.|||   +.+++||||||+||+++.++.+||+|||++.......
T Consensus        83 ~~L~~~l~~~-----~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~  154 (254)
T cd05083          83 GNLVNFLRTR-----GRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV  154 (254)
T ss_pred             CCHHHHHHhc-----CcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence            9999998622     2346899999999999999999999   9999999999999999999999999999987654321


Q ss_pred             c-ccccccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHHHHHHHHc
Q 045682          218 L-LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFEC  283 (309)
Q Consensus       218 ~-~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~C  283 (309)
                      . ......+.+++..      ...+.|+++..++.++. +..      ..+..+....+.. ...+...+..+.+++.+|
T Consensus       155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~  233 (254)
T cd05083         155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR-MEPPEGCPADVYVLMTSC  233 (254)
T ss_pred             CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC-CCCCCcCCHHHHHHHHHH
Confidence            1 1111222233321      22456677777776653 221      1122222222222 222335678899999999


Q ss_pred             ccCCCCCCCCHHHHHHHHHH
Q 045682          284 VNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       284 l~~~P~~RPt~~~l~~~L~~  303 (309)
                      |+.+|+.||++.+|++.|++
T Consensus       234 l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         234 WETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             cCCChhhCcCHHHHHHHHcc
Confidence            99999999999999998763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1e-33  Score=248.46  Aligned_cols=233  Identities=15%  Similarity=0.159  Sum_probs=171.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||.||+|..  +++.||+|.+.... ......+.+|+.+++.++||||+++++++.++...++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            46788899999999999999998  78999999987543 2233467889999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |++ ++|.+++..      ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        84 ~~~-~~l~~~~~~------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  153 (303)
T cd07869          84 YVH-TDLCQYMDK------HPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAK  153 (303)
T ss_pred             CCC-cCHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence            996 588888751      3456889999999999999999999   999999999999999999999999999998754


Q ss_pred             CCCc----cccccccccccccccC-------CCcccHHHHHHHHhhcccccccc-------cccc--cCC----------
Q 045682          214 PEGE----LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEII-------DPLI--MGD----------  263 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~g~----------  263 (309)
                      ....    ...|...+.+|+....       .+.|+++..++.++.+.....-.       ....  .+.          
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (303)
T cd07869         154 SVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVH  233 (303)
T ss_pred             cCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchh
Confidence            3211    1223444555553222       24455555555555443221100       0000  000          


Q ss_pred             ---------C---CCCc-hH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 ---------R---SCSG-KE-----QQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 ---------~---~~~~-~~-----~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                               .   .+.. ..     ..+..+.+|+..||+.||.+|||+.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence                     0   0000 00     11356889999999999999999999974

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.9e-33  Score=241.37  Aligned_cols=233  Identities=18%  Similarity=0.288  Sum_probs=172.3

Q ss_pred             CceeecCCeEEEEEEe-----CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeee-eCCceEEEEEecc
Q 045682           64 KVIMKRSFYTLYKGFC-----QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCL-ETQIPILVFEYIN  136 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~-~~~~~~lv~e~~~  136 (309)
                      +.||+|+||.||+|.+     ....||+|.+.... ......+.+|+.+++.++||||+++++++. .++..+++|||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            3689999999999986     23579999986543 344577899999999999999999999876 4566899999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++..      ....+++..+..++.|++.||+|||   +.+++|+||||+|||+++++.+||+|||+++.....
T Consensus        81 ~~~L~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~  151 (262)
T cd05058          81 HGDLRNFIRS------ETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDK  151 (262)
T ss_pred             CCCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCC
Confidence            9999999851      2344678888999999999999999   899999999999999999999999999998765332


Q ss_pred             c--------ccccccccccccccc------CCCcccHHHHHHHHhhcc-cc------cccccccccCCCCCCchHHHHHH
Q 045682          217 E--------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEED-RL------NEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       217 ~--------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .        ...+...+.+++...      ..+.|+++..+++++.+. ..      .+.......+..+ ..+...+..
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  230 (262)
T cd05058         152 EYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL-LQPEYCPDP  230 (262)
T ss_pred             cceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC-CCCCcCCHH
Confidence            1        111122233333221      234556666666655422 11      1122222222222 222345678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      +.+++..||+.+|++||++.+|++.|+++..
T Consensus       231 ~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         231 LYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.4e-33  Score=241.24  Aligned_cols=232  Identities=19%  Similarity=0.267  Sum_probs=184.2

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||+|++|.||+|.+  ++..|++|.+...  .......+.+|+.+++.++||||+++++++..++..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            467778899999999999998  7899999998653  334557789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++...     ....+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||+++...
T Consensus        81 ~~~~~L~~~l~~~-----~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~  152 (256)
T cd08529          81 AENGDLHKLLKMQ-----RGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS  152 (256)
T ss_pred             CCCCcHHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceecc
Confidence            9999999998622     2457899999999999999999999   8999999999999999999999999999988765


Q ss_pred             CCc----ccccccccccccc------ccCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ...    ...|...+.+++.      ....+.|+++..++.++.+...      .+.......+..+.. +...+.++.+
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (256)
T cd08529         153 DNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPV-SQMYSQQLAQ  231 (256)
T ss_pred             CccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-ccccCHHHHH
Confidence            432    2234444444443      2235677888888887655432      122223333433322 2256688999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+||+.+|++||++.++++
T Consensus       232 ~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         232 LIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHHHHccCCcccCcCHHHHhh
Confidence            999999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.3e-33  Score=247.81  Aligned_cols=241  Identities=16%  Similarity=0.232  Sum_probs=181.2

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCC
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQ  126 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~  126 (309)
                      ..++|...+.||+|+||.||+|.+       .+..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            445688899999999999999975       23579999887653 33446789999999999 8999999999999999


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..+++|||+++|+|.+++...     ....+++.++..++.|++.||.|||   +.+++|+||||+|||++.++.++|+|
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~-----~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~d  184 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRK-----RESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICD  184 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECC
Confidence            999999999999999998621     2234899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCcc------ccccccccccccc------cCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCC
Q 045682          207 FSFSISIPEGEL------LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCS  267 (309)
Q Consensus       207 fg~a~~~~~~~~------~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~  267 (309)
                      ||+++.......      ..+...+.+++..      ...+.|+++..+++++. +....      +.+...........
T Consensus       185 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~  264 (302)
T cd05055         185 FGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA  264 (302)
T ss_pred             CcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC
Confidence            999986543221      1122223334421      12356666666666654 32221      11111111111112


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .+...+.++.+++.+||+.+|++|||+.+|++.|+++
T Consensus       265 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         265 QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            2223457899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.1e-33  Score=246.43  Aligned_cols=247  Identities=17%  Similarity=0.244  Sum_probs=180.3

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      ..+++|+..+.||+|+||.||+|...       +..||+|.+.... ......+.+|+.+++.++||||+++++++.+..
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            45677899999999999999999752       3579999876543 233356889999999999999999999999989


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCC---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEE
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQ---PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~k  203 (309)
                      ..++||||+++|+|.+++.......   ......++..+..++.|++.||.|||   +++++||||||+||+++.++.++
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEE
Confidence            9999999999999999996432111   11344577888999999999999999   99999999999999999999999


Q ss_pred             EeecccccccCCCcc------cccccccccccccc------CCCcccHHHHHHHHhh-cc-cc-----cccccccccCCC
Q 045682          204 LFDFSFSISIPEGEL------LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED-RL-----NEIIDPLIMGDR  264 (309)
Q Consensus       204 l~Dfg~a~~~~~~~~------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~-~~-----~~~~~~~~~g~~  264 (309)
                      |+|||+++.......      ..+...+.+++...      ..+.|+++..+++++. +. .+     .++.+....+..
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~  239 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY  239 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence            999999876533221      11122233333321      2345555555555543 11 11     122222222322


Q ss_pred             CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          265 SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       265 ~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      ... +...+..+.+++.+||+.+|++|||+.++++.|++..
T Consensus       240 ~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         240 LDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             CCC-CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            211 2244678999999999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.4e-34  Score=248.43  Aligned_cols=243  Identities=16%  Similarity=0.213  Sum_probs=176.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEeC----------------CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQ----------------ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLI  119 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~  119 (309)
                      .++|...+.||+|+||.||++...                ...||+|.+.... ......|.+|++++.+++||||++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            356888899999999999998762                1358999987653 33446799999999999999999999


Q ss_pred             eeeeeCCceEEEEEeccCCChhhhhhhhCC-----CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          120 GCCLETQIPILVFEYINCGSLADRIRIQHN-----PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       120 g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                      +++..++..++||||+++++|.+++.....     .......+++..++.++.|++.||.|||   +.+++|+||||+||
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Ni  160 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNC  160 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhE
Confidence            999999999999999999999999853210     0011234789999999999999999999   99999999999999


Q ss_pred             eecCCCcEEEeecccccccCCCcc--cc----cccccccccc------ccCCCcccHHHHHHHHhhcc---cc-----cc
Q 045682          195 LFNEENVAKLFDFSFSISIPEGEL--LT----GLRAFDLARL------NEDDGYVALRDHVKKYFEED---RL-----NE  254 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~~~~~~--~~----g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~-----~~  254 (309)
                      +++.++.+||+|||++........  ..    +..++.+++.      ....+.|+++..++.++...   .+     .+
T Consensus       161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~  240 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ  240 (295)
T ss_pred             EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence            999999999999999876543321  11    1223433432      22345666666666655311   11     11


Q ss_pred             cccccc-----cCCC-CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          255 IIDPLI-----MGDR-SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       255 ~~~~~~-----~g~~-~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ++....     .+.. ....+...+..+.+|+.+||+.+|++|||+.+|++.|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         241 VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            111000     0000 00111234578999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.7e-34  Score=243.37  Aligned_cols=238  Identities=20%  Similarity=0.286  Sum_probs=182.6

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ..++|...+.||+|+||.||+|.+ .+..||+|.+.... ...+.+.+|+.++++++||||+++++++..+...++||||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            456788899999999999999998 66889999987654 3346799999999999999999999999988899999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++..     .....+++..+..++.|++.|+.|||   +.+++|+||+|+||+++.++.+||+|||++....
T Consensus        83 ~~~~~L~~~i~~-----~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034          83 MSKGSLLDFLKS-----GEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIE  154 (261)
T ss_pred             cCCCCHHHHHhc-----cccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceecc
Confidence            999999999862     12356899999999999999999999   8999999999999999999999999999988765


Q ss_pred             CCcc-----ccccccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHH
Q 045682          215 EGEL-----LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       215 ~~~~-----~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....     ..+...+.+|+..      ...+.|+++..++.++. +..      ....++....+.. ...+...+.++
T Consensus       155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  233 (261)
T cd05034         155 DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR-MPRPPNCPEEL  233 (261)
T ss_pred             chhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHH
Confidence            3221     1111223333321      22355666666666654 221      1122222222221 12222446789


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      .+++.+||+.+|.+||++.++.+.|+.
T Consensus       234 ~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         234 YDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.6e-33  Score=246.47  Aligned_cols=231  Identities=17%  Similarity=0.219  Sum_probs=181.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ..|+..+.||+|+||.||+|..  +++.|++|.+..........+.+|+.+++.++||||+++++.+..+...++||||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            5688888999999999999997  78999999987765555677899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++.        ...+++.++..++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||++.....
T Consensus       100 ~~~~L~~~~~--------~~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~  168 (296)
T cd06654         100 AGGSLTDVVT--------ETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (296)
T ss_pred             CCCCHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence            9999999985        345889999999999999999999   89999999999999999999999999999876543


Q ss_pred             Cc----cccccccccccccc------cCCCcccHHHHHHHHhhccccccc-------ccccccCCCCCCchHHHHHHHHH
Q 045682          216 GE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEI-------IDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ..    ...|...+.+|+..      ...+.|+++..++.++.+......       ......+..+...+...+..+.+
T Consensus       169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  248 (296)
T cd06654         169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD  248 (296)
T ss_pred             cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHH
Confidence            22    22344444444432      234667777777776655432111       11111122222223355678999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+||..+|++|||+.+|++
T Consensus       249 li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         249 FLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHHHCcCCcccCcCHHHHhh
Confidence            999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=9.3e-34  Score=263.79  Aligned_cols=242  Identities=15%  Similarity=0.161  Sum_probs=186.2

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      .+.....++|...+.||+|+||+||+|..  +++.||||.+....  ......+.+|+..+..++|+||+++++.+....
T Consensus        25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence            34445568899999999999999999988  78999999986542  344567889999999999999999988775432


Q ss_pred             --------ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC
Q 045682          127 --------IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE  198 (309)
Q Consensus       127 --------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~  198 (309)
                              ..++||||+++|+|.+++....   .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~---~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~  178 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDLRQEIKSRA---KTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCS  178 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcHHHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeC
Confidence                    3679999999999999985321   13457899999999999999999999   999999999999999999


Q ss_pred             CCcEEEeecccccccCCC------ccccccccccccccccC------CCcccHHHHHHHHhhccc------ccccccccc
Q 045682          199 ENVAKLFDFSFSISIPEG------ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDR------LNEIIDPLI  260 (309)
Q Consensus       199 ~~~~kl~Dfg~a~~~~~~------~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~~~~~~~  260 (309)
                      ++.+||+|||+++.....      ....|...|.+|+....      .+.|+++..++.++.+..      ..+++....
T Consensus       179 ~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~  258 (496)
T PTZ00283        179 NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL  258 (496)
T ss_pred             CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence            999999999998765321      12345555666654332      355666666666655432      223444444


Q ss_pred             cCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          261 MGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       261 ~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+..... +...+.++.+|+..||+.+|.+|||+.++++
T Consensus       259 ~~~~~~~-~~~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        259 AGRYDPL-PPSISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             cCCCCCC-CCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            4444332 2356788999999999999999999999875

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.4e-33  Score=244.36  Aligned_cols=242  Identities=17%  Similarity=0.253  Sum_probs=180.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      +++|...+.||+|+||.||+|.+.       +..|++|.+.... ......|.+|+.+++.++|+||+++++++.+....
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            466888899999999999999983       3678999876543 23345689999999999999999999999998899


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC---cEEEe
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN---VAKLF  205 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~---~~kl~  205 (309)
                      ++||||+++++|.+++............+++..++.++.||+.||+|||   +.+++|+||||+||+++.++   .+||+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEec
Confidence            9999999999999998654322223346899999999999999999999   89999999999999998654   69999


Q ss_pred             ecccccccCCCccc------ccccccccccc------ccCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCC
Q 045682          206 DFSFSISIPEGELL------TGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSC  266 (309)
Q Consensus       206 Dfg~a~~~~~~~~~------~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~  266 (309)
                      |||+++........      .+...+.+|+.      ....+.|+++..+++++. +..      ..++.+....+. ..
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~  240 (277)
T cd05036         162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG-RL  240 (277)
T ss_pred             cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-cC
Confidence            99999876332211      01122333332      223456666666666553 211      112222222221 12


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ..+...+.++.+++.+||+.+|++|||+.+|++.|+
T Consensus       241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            222355678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.1e-33  Score=242.73  Aligned_cols=237  Identities=17%  Similarity=0.252  Sum_probs=181.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ..++|...++||+|+||.||+|.. +++.||+|.+.... .....+.+|+.+++.++||||+++++++. .+..+++|||
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY   81 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence            456788889999999999999998 77899999987654 23467899999999999999999999874 4568999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++...     ....+++.++..++.|++.||+|||   +.+++|+||+|+||++++++.++|+|||++....
T Consensus        82 ~~~~~L~~~~~~~-----~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067          82 MENGSLVDFLKTP-----EGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIE  153 (260)
T ss_pred             CCCCCHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence            9999999998522     3457899999999999999999999   8999999999999999999999999999997765


Q ss_pred             CCccc-----ccccccccccc------ccCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHHH
Q 045682          215 EGELL-----TGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       215 ~~~~~-----~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      .....     .+...+.+++.      ....+.|+++..++.++. +....      +.......+. ....+...+.++
T Consensus       154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  232 (260)
T cd05067         154 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY-RMPRPDNCPEEL  232 (260)
T ss_pred             CCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC-CCCCCCCCCHHH
Confidence            32211     11122333332      223466777777776664 32211      1222211121 112223456789


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      .+++.+||+.+|++|||++++...|++
T Consensus       233 ~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         233 YELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-34  Score=257.06  Aligned_cols=231  Identities=15%  Similarity=0.138  Sum_probs=181.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|..  +++.||+|.+....   ......+.+|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            3688889999999999999999  68999999986532   234567889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||+|||   ..+++||||||+|||++.++.+||+|||++..
T Consensus        81 e~~~~~~L~~~l~-------~~~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~  150 (350)
T cd05573          81 EYMPGGDLMNLLI-------RKDVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKK  150 (350)
T ss_pred             cCCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCcc
Confidence            9999999999986       3467999999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCCc---------------------------------cccccccccccccc------cCCCcccHHHHHHHHhhccccc
Q 045682          213 IPEGE---------------------------------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN  253 (309)
Q Consensus       213 ~~~~~---------------------------------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      .....                                 ...|...|.+|+..      ...+.|+++..++.++.+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf  230 (350)
T cd05573         151 MNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPF  230 (350)
T ss_pred             CcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCC
Confidence            54322                                 23355555555432      2346777887777776544321


Q ss_pred             ------cccccccc--CCCCCCchHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 045682          254 ------EIIDPLIM--GDRSCSGKEQQLQAYAHLIFECVNESPVDRPT-MVDVAK  299 (309)
Q Consensus       254 ------~~~~~~~~--g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt-~~~l~~  299 (309)
                            +....+..  .....+.....+.++.+|+..|++ +|.+||+ +.++++
T Consensus       231 ~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         231 YSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             CCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence                  11111111  111111112346889999999998 9999999 999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-33  Score=240.48  Aligned_cols=230  Identities=20%  Similarity=0.324  Sum_probs=175.8

Q ss_pred             CceeecCCeEEEEEEe--CC---eEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QE---RLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  .+   ..+|+|.+..... ...+.+.+|+.+++.+.||||+++++++.. ...++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence            4699999999999987  33   6899999876543 345679999999999999999999998764 568999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      |+|.+++.       ....+++..+..++.|++.||+|||   ..+++|+||||+||+++.++.+||+|||+++......
T Consensus        80 ~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~  149 (257)
T cd05060          80 GPLLKYLK-------KRREIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGS  149 (257)
T ss_pred             CcHHHHHH-------hCCCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCC
Confidence            99999986       3447899999999999999999999   8999999999999999999999999999988664332


Q ss_pred             c-----ccc--ccccccccc------ccCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHHHH
Q 045682          218 L-----LTG--LRAFDLARL------NEDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       218 ~-----~~g--~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      .     ..+  ...+.+|+.      ....+.|+++..++.++. +....      ++......+.. ...+...+..+.
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  228 (257)
T cd05060         150 DYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER-LPRPEECPQEIY  228 (257)
T ss_pred             cccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc-CCCCCCCCHHHH
Confidence            1     111  112333332      223467777777777764 32221      12222222222 122235567899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      +++.+||+.+|++|||+.+|++.|+++.
T Consensus       229 ~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         229 SIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            9999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=3.3e-34  Score=258.29  Aligned_cols=233  Identities=13%  Similarity=0.138  Sum_probs=184.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ..++|+..+.||+|+||.||++..  ++..||+|.+...   .......+.+|+.+++.++||||+++++++.+++..++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            456788899999999999999998  7889999998643   22334557899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++.        ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       121 v~Ey~~gg~L~~~l~--------~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~  189 (370)
T cd05596         121 VMEYMPGGDLVNLMS--------NYDIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC  189 (370)
T ss_pred             EEcCCCCCcHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccce
Confidence            999999999999985        345888899999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCc-----cccccccccccccc----------cCCCcccHHHHHHHHhhccccc------ccccccccCCC--CCC
Q 045682          211 ISIPEGE-----LLTGLRAFDLARLN----------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDR--SCS  267 (309)
Q Consensus       211 ~~~~~~~-----~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~--~~~  267 (309)
                      .......     ...|...+.+|+..          ...+.|+++..++.++.+....      .....+..+..  ..+
T Consensus       190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~  269 (370)
T cd05596         190 MKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFP  269 (370)
T ss_pred             eeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCC
Confidence            7764332     23466666666532          2357888888888886554321      12222222221  122


Q ss_pred             chHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVD--RPTMVDVAK  299 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~--RPt~~~l~~  299 (309)
                      .....+.++.+++..||+.+|.+  |||+.++++
T Consensus       270 ~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         270 DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            22245688999999999999987  999999964

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=6.8e-34  Score=247.04  Aligned_cols=240  Identities=15%  Similarity=0.204  Sum_probs=181.3

Q ss_pred             CCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      |...+.||+|+||.||+|.+.       +..||+|++..... .....+..|+.++..++||||+++++++......+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            555678999999999999872       37899999876543 3346688999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCC---------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          132 FEYINCGSLADRIRIQHN---------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~---------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      +||+++++|.+++.....         .......+++..+..++.|++.||.|||   +.+++||||||+||++++++.+
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~  163 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNV  163 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCce
Confidence            999999999999842210         0112345889999999999999999999   9999999999999999999999


Q ss_pred             EEeecccccccCCCccc--c----cccccccccc------ccCCCcccHHHHHHHHhh-cc------cccccccccccCC
Q 045682          203 KLFDFSFSISIPEGELL--T----GLRAFDLARL------NEDDGYVALRDHVKKYFE-ED------RLNEIIDPLIMGD  263 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~~~--~----g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~  263 (309)
                      ||+|||+++........  .    +...|.+|+.      ....+.|+++..+++++. +.      ...++.+....+.
T Consensus       164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~  243 (283)
T cd05091         164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ  243 (283)
T ss_pred             EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            99999998765432211  1    1122333332      223467777777777664 22      1123334433333


Q ss_pred             CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          264 RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       264 ~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      ... .+..++..+.+|+..||+.+|.+||++.+|+..|+.
T Consensus       244 ~~~-~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         244 VLP-CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             cCC-CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            322 223677889999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2.1e-33  Score=245.69  Aligned_cols=243  Identities=14%  Similarity=0.216  Sum_probs=179.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe------------------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCccee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC------------------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFK  117 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~------------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~  117 (309)
                      .++|+..+.||+|+||.||++.+                  +...||+|.+.... ......+.+|+.++..++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            35688899999999999999854                  23468999987653 334567999999999999999999


Q ss_pred             eeeeeeeCCceEEEEEeccCCChhhhhhhhCCC----CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNP----QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       118 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      +++++..++..++||||+++|+|.+++......    ......+++.++..++.|++.||+|||   +.+++|+||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~N  160 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhe
Confidence            999999999999999999999999998643211    112345888999999999999999999   9999999999999


Q ss_pred             eeecCCCcEEEeecccccccCCCcc--ccc----cccccccc------cccCCCcccHHHHHHHHhhc--c-cc-----c
Q 045682          194 ILFNEENVAKLFDFSFSISIPEGEL--LTG----LRAFDLAR------LNEDDGYVALRDHVKKYFEE--D-RL-----N  253 (309)
Q Consensus       194 ill~~~~~~kl~Dfg~a~~~~~~~~--~~g----~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~-~~-----~  253 (309)
                      ||++.++.++|+|||++........  ..+    ...+..++      .....+.|+++..+++++..  . .+     .
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE  240 (296)
T ss_pred             EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence            9999999999999999876533221  111    11122222      12235677777777776531  1 11     1


Q ss_pred             cccccc-------ccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          254 EIIDPL-------IMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       254 ~~~~~~-------~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      +++...       ..... .+.+..++..+.+|+.+||+.||++|||+.+|.+.|++
T Consensus       241 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         241 QVIENTGEFFRDQGRQVY-LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHHHHHHhhcccccc-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            111100       00011 11123456789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.7e-33  Score=244.88  Aligned_cols=246  Identities=17%  Similarity=0.163  Sum_probs=185.2

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeee-
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCL-  123 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~-  123 (309)
                      +.++.+....++|+..+.||+|+||.||+|..  +++.+|+|.+.... .....+.+|+.++..+ +||||+++++++. 
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            55677788899999999999999999999998  77899999876543 2235688899999999 7999999999884 


Q ss_pred             ----eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          124 ----ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       124 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                          .++..++||||+++++|.+++....   .....+++..+..++.|++.||.|||   +.+++|+||||+||+++.+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~  160 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFL---KRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTE  160 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhh---ccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCC
Confidence                3456899999999999999875221   13456899999999999999999999   8999999999999999999


Q ss_pred             CcEEEeecccccccCCCc----ccccccccccccc-----------ccCCCcccHHHHHHHHhhcccccc------cccc
Q 045682          200 NVAKLFDFSFSISIPEGE----LLTGLRAFDLARL-----------NEDDGYVALRDHVKKYFEEDRLNE------IIDP  258 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~----~~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  258 (309)
                      +.+||+|||++.......    ...|...+.+|+.           ....+.|+++..+|.++.+.....      .+..
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~  240 (286)
T cd06638         161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK  240 (286)
T ss_pred             CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh
Confidence            999999999987654322    2234444444442           123466777777777765432211      1111


Q ss_pred             cccCCC-CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          259 LIMGDR-SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       259 ~~~g~~-~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ...+.. ....+...+..+.+|+.+||+.+|++|||+.+|++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         241 IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             ccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            111111 111122345679999999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.6e-33  Score=243.02  Aligned_cols=228  Identities=17%  Similarity=0.216  Sum_probs=175.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +|+..+.||+|+||.||+|.+  ++..||+|.+.... ......+.+|+.++.+++||||+++++++..++..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            567788999999999999998  78999999986542 334467899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|..+           ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....
T Consensus        82 ~~~~l~~~-----------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          82 DGGSLDVY-----------RKIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             CCCChHHh-----------hcCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence            99999765           24678889999999999999999   99999999999999999999999999999976543


Q ss_pred             C--ccccccccccccccc------cCCCcccHHHHHHHHhhcccccccc-------------cccccCCCCCCchHHHHH
Q 045682          216 G--ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEII-------------DPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       216 ~--~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~g~~~~~~~~~~~~  274 (309)
                      .  ....|...+.+|+..      ...+.|+++..++.++.+.......             ........+.......+.
T Consensus       148 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (279)
T cd06619         148 SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSE  227 (279)
T ss_pred             ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCH
Confidence            2  223444455555432      2346677777777776544322111             110111111111223457


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ++.+++.+||+.+|++||++.++++.
T Consensus       228 ~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         228 KFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            79999999999999999999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=2.2e-33  Score=242.22  Aligned_cols=239  Identities=18%  Similarity=0.252  Sum_probs=181.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe-C----CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-Q----ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...+.||+|+||.||+|.+ +    ...|++|...... ....+.+.+|+.+++.++||||+++++++.+ ...++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            4577888999999999999997 2    2468999887654 3455679999999999999999999998875 457899


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+++
T Consensus        85 ~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~  155 (270)
T cd05056          85 MELAPLGELRSYLQV------NKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSR  155 (270)
T ss_pred             EEcCCCCcHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceee
Confidence            999999999999862      2346899999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCccc-----cccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHH
Q 045682          212 SIPEGELL-----TGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       212 ~~~~~~~~-----~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      ........     .+...+.+++..      ...+.|+++..++.++. +...      .+.......+.... .+..++
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~  234 (270)
T cd05056         156 YLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLP-MPPNCP  234 (270)
T ss_pred             ecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCC-CCCCCC
Confidence            65433211     111223333321      22456667666666542 2211      12222222333222 223567


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .++.+++.+||..+|.+|||+.++++.|+++...
T Consensus       235 ~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         235 PTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            8899999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.4e-33  Score=245.69  Aligned_cols=243  Identities=22%  Similarity=0.271  Sum_probs=181.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .++|+....||+|+||.||+|.+       ++..||+|.+.... ......+.+|+.++++++||||+++++++..+...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            46688889999999999999986       35789999987653 23446799999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCC---------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          129 ILVFEYINCGSLADRIRIQHNP---------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~---------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      ++||||+++|+|.+++......               ......+++..++.++.|++.||.|||   ..+++|+||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence            9999999999999998633210               112245789999999999999999999   8999999999999


Q ss_pred             eeecCCCcEEEeecccccccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhh-cc-c-----ccc
Q 045682          194 ILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-ED-R-----LNE  254 (309)
Q Consensus       194 ill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~-~-----~~~  254 (309)
                      |+++.++.++|+|||++.......      ......++.+++..      ...+.|+++..++.++. +. .     ..+
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~  240 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE  240 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999987643221      11112233333321      12355666666666553 21 1     112


Q ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          255 IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       255 ~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      +......+.... .+...+.++.+++.+||+.+|.+|||+.||++.|++
T Consensus       241 ~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         241 VIYYVRDGNVLS-CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHhcCCCCC-CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            222222233221 123456789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.2e-33  Score=242.40  Aligned_cols=238  Identities=19%  Similarity=0.262  Sum_probs=181.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CC----eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QE----RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .+|...+.||+|+||.||+|.+  ++    ..+|+|.+.... ......+.+|+.+++.++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            4577788999999999999997  33    368999887654 3345678999999999999999999999987 78899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++..      ....+++..++.++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||++
T Consensus        86 v~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~  156 (279)
T cd05057          86 ITQLMPLGCLLDYVRN------HKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLA  156 (279)
T ss_pred             EEecCCCCcHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccc
Confidence            9999999999999862      2446899999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCccc---c-c--cccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          211 ISIPEGELL---T-G--LRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~~~---~-g--~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      +........   . +  ...+.+++..      ...+.|+++..+++++. +...      .++.+....+.... .+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~  235 (279)
T cd05057         157 KLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLP-QPPI  235 (279)
T ss_pred             ccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCC-CCCC
Confidence            876533211   1 1  1123333321      22456666666666553 3221      22222333232222 2224


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ++..+.+++.+||..+|++|||+.++++.|.++.+
T Consensus       236 ~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         236 CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            56779999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=4.2e-33  Score=242.03  Aligned_cols=231  Identities=16%  Similarity=0.194  Sum_probs=180.1

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      |+..+.||+|+||.||+|.+  ++..+++|.+..........+.+|+.++..++||||+++++++..++..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            45567899999999999999  6788899998776656667899999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      ++|..++..      ...++++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++...... 
T Consensus        87 ~~l~~~~~~------~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~  157 (282)
T cd06643          87 GAVDAVMLE------LERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI  157 (282)
T ss_pred             CcHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccc
Confidence            999998741      2457999999999999999999999   999999999999999999999999999998765322 


Q ss_pred             ---ccccccccccccccc-----------cCCCcccHHHHHHHHhhccccccccc------ccccCCCC-CCchHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLNEIID------PLIMGDRS-CSGKEQQLQA  275 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~-~~~~~~~~~~  275 (309)
                         ....+...+.+|+..           ...+.|+++..+|.++.+.......+      ....+..+ ...+...+.+
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (282)
T cd06643         158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSE  237 (282)
T ss_pred             cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHH
Confidence               122344444444432           23567777777777765543322111      11111111 1122345688


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+++..||+.+|.+|||+.++++
T Consensus       238 ~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         238 FKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.6e-33  Score=249.67  Aligned_cols=224  Identities=15%  Similarity=0.181  Sum_probs=169.5

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      +.||+|+||.||++..  ++..||+|.+...   .......+.+|+.++..++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999998  7899999998753   2233456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      +|.+++.       ....+++..+..++.||+.||.|||   + .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        81 ~L~~~l~-------~~~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~  150 (325)
T cd05594          81 ELFFHLS-------RERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  150 (325)
T ss_pred             cHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC
Confidence            9999986       4567999999999999999999999   6 79999999999999999999999999998754221 


Q ss_pred             ---ccccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+|+....      .+.|+++..++.++.+...      .+.......+...  .+...+.++.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~  228 (325)
T cd05594         151 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLSPEAKSLLS  228 (325)
T ss_pred             cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHH
Confidence               12346666666654322      2344444444433332211      1111111111111  11234577999999


Q ss_pred             HcccCCCCCCC-----CHHHHHH
Q 045682          282 ECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       282 ~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      +||+.||.+||     ++.++++
T Consensus       229 ~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         229 GLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHhhcCHHHhCCCCCCCHHHHhc
Confidence            99999999996     8888864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-33  Score=239.56  Aligned_cols=235  Identities=22%  Similarity=0.314  Sum_probs=179.4

Q ss_pred             CceeecCCeEEEEEEeC-----CeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFCQ-----ERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|...     +..|++|.+...... ....+.+|+..+..++|+||+++++++..+...++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            36899999999999993     789999998776433 367899999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhCCC--CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          138 GSLADRIRIQHNP--QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       138 gsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|.+++......  ......+++..++.++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999998621000  001377999999999999999999999   99999999999999999999999999999987755


Q ss_pred             Cc------cccccccccccccc------cCCCcccHHHHHHHHhhc-cc------ccccccccccCCCCCCchHHHHHHH
Q 045682          216 GE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEE-DR------LNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       216 ~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ..      ...+...+.+|+..      ...+.|+++..++.++.. ..      ..++.+....+... ..+...+.++
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  236 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL-PKPEYCPDEL  236 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-CCCccCChHH
Confidence            32      12222333334322      224666777666666542 21      11222333222222 2233557889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      .+++.+||+.+|.+|||+.++++.|+
T Consensus       237 ~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         237 YELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHHccCCcccCcCHHHHHHhhC
Confidence            99999999999999999999998873

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.9e-33  Score=239.44  Aligned_cols=233  Identities=19%  Similarity=0.227  Sum_probs=185.1

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||.|+||.||.+..  ++..+++|.+...  .......+.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            477889999999999988887  7899999987654  345557789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++...     ....+++.++..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++....
T Consensus        81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~  152 (256)
T cd08221          81 ANGGTLYDKIVRQ-----KGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILG  152 (256)
T ss_pred             cCCCcHHHHHHhc-----cccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence            9999999998621     2456899999999999999999999   8999999999999999999999999999987664


Q ss_pred             CCc----cccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ...    ...|...+.+++..      ...+.|+++..++.++.+...      .+.......+..+... ...+.++.+
T Consensus       153 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  231 (256)
T cd08221         153 SEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV-SVYSSELIS  231 (256)
T ss_pred             cccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc-cccCHHHHH
Confidence            432    23344444444432      234777888888877655332      2233333444443322 356788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ++..||+.+|.+|||+.++++.
T Consensus       232 ~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         232 LVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHcccCcccCCCHHHHhhC
Confidence            9999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=3.1e-33  Score=238.43  Aligned_cols=229  Identities=21%  Similarity=0.283  Sum_probs=172.8

Q ss_pred             CceeecCCeEEEEEEe-CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCChh
Q 045682           64 KVIMKRSFYTLYKGFC-QERLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA  141 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~  141 (309)
                      ++||+|+||.||+|.. ++..+|+|.+..... .....+.+|+.++..++||||+++++++...+..++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            3689999999999988 778899999876542 33456889999999999999999999999999999999999999999


Q ss_pred             hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCcc---
Q 045682          142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL---  218 (309)
Q Consensus       142 ~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~---  218 (309)
                      +++..      ....+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.+||+|||++........   
T Consensus        81 ~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  151 (250)
T cd05085          81 SFLRK------KKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS  151 (250)
T ss_pred             HHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccC
Confidence            99851      2345889999999999999999999   99999999999999999999999999999876443221   


Q ss_pred             --ccccccccccccc------cCCCcccHHHHHHHHhh-cc-cc-----cccccccccCCCCCCchHHHHHHHHHHHHHc
Q 045682          219 --LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-ED-RL-----NEIIDPLIMGDRSCSGKEQQLQAYAHLIFEC  283 (309)
Q Consensus       219 --~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~-~~-----~~~~~~~~~g~~~~~~~~~~~~~l~~li~~C  283 (309)
                        ..+...+.+|+..      ...+.|+++..++.++. +. .+     .........+... ..+...+..+.+++.+|
T Consensus       152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~  230 (250)
T cd05085         152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM-SCPQKCPDDVYKVMQRC  230 (250)
T ss_pred             CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHH
Confidence              1112223334322      12355666666665543 22 11     1111111122111 11224568899999999


Q ss_pred             ccCCCCCCCCHHHHHHHHH
Q 045682          284 VNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       284 l~~~P~~RPt~~~l~~~L~  302 (309)
                      |+.+|++|||+.++++.|.
T Consensus       231 l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         231 WDYKPENRPKFSELQKELA  249 (250)
T ss_pred             cccCcccCCCHHHHHHHhc
Confidence            9999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=2.2e-33  Score=240.93  Aligned_cols=235  Identities=17%  Similarity=0.244  Sum_probs=176.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      ++|.....||+|+||.||+|.+ .+..+|+|.+.... ...+.+.+|+.+++.++|||++++++++.. +..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence            4577888999999999999998 55679999876543 334678899999999999999999998754 56889999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++......
T Consensus        84 ~~~L~~~~~~~-----~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05069          84 KGSLLDFLKEG-----DGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN  155 (260)
T ss_pred             CCCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence            99999998621     2345899999999999999999999   899999999999999999999999999999765433


Q ss_pred             ccc-----cccccccccccc------cCCCcccHHHHHHHHhh-ccc-c-----cccccccccCCCCCCchHHHHHHHHH
Q 045682          217 ELL-----TGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR-L-----NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       217 ~~~-----~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ...     .+...+.+++..      ...+.|+++..++.++. +.. +     .+.......+ .....+...+..+.+
T Consensus       156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  234 (260)
T cd05069         156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YRMPCPQGCPESLHE  234 (260)
T ss_pred             cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCcccCHHHHH
Confidence            211     122223333322      12355666666666654 221 1     1122222222 122223356788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      ++.+||+.+|++||++.+|.+.|++
T Consensus       235 li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         235 LMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHccCCcccCcCHHHHHHHHhc
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=7.5e-34  Score=240.81  Aligned_cols=233  Identities=16%  Similarity=0.220  Sum_probs=170.0

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--hhHHHHHHHHHHHhhccCCc-ceeeeeeeeeCC------c
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--RMYDCCINNIVYASQMIHRC-FFKLIGCCLETQ------I  127 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~l~g~~~~~~------~  127 (309)
                      .|...++||+|+||+||+|+.  +|+.||+|++.....  .......+|+.+++.++|+| |+.+++++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            355566799999999999999  889999999877643  34456789999999999999 999999999877      7


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++|+||+.. +|.+++.....   ....++...+..++.||+.||+|||   +++|+||||||+||||+++|.+||+||
T Consensus        92 l~lvfe~~d~-DL~~ymd~~~~---~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDF  164 (323)
T KOG0594|consen   92 LYLVFEFLDR-DLKKYMDSLPK---KPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADF  164 (323)
T ss_pred             EEEEEEeecc-cHHHHHHhccc---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeecc
Confidence            8999999987 99999974321   1146777899999999999999999   999999999999999999999999999


Q ss_pred             ccccccC-C-----CccccccccccccccccC-------CCcccHHHHHHHHhhccccc----------ccccc------
Q 045682          208 SFSISIP-E-----GELLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLN----------EIIDP------  258 (309)
Q Consensus       208 g~a~~~~-~-----~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----------~~~~~------  258 (309)
                      |+|+... +     .+..|+.  |.+|+...+       -+.|+++..+.+++....+.          .++..      
T Consensus       165 GlAra~~ip~~~yt~evvTlW--YRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e  242 (323)
T KOG0594|consen  165 GLARAFSIPMRTYTPEVVTLW--YRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNE  242 (323)
T ss_pred             chHHHhcCCcccccccEEEee--ccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCc
Confidence            9998654 1     2233333  222222222       24566666666654332110          00000      


Q ss_pred             --------cccCCCCC---CchHHH-------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          259 --------LIMGDRSC---SGKEQQ-------LQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       259 --------~~~g~~~~---~~~~~~-------~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                              ......++   ..+...       .....+++..|++++|..|.|+...++.
T Consensus       243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                    00000000   001111       2468899999999999999999998864

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.2e-33  Score=255.02  Aligned_cols=230  Identities=15%  Similarity=0.162  Sum_probs=171.2

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-----ceE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-----IPI  129 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~  129 (309)
                      +|+..+.||+|+||.||+|..  +++.||+|++...  .....+.+.+|+.++..++||||+++++++....     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999997  7899999998653  2234467889999999999999999999998766     789


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +|+||+. ++|.+++.       ....+++..+..++.||+.||.|||   +.+++||||||+|||++.++.+||+|||+
T Consensus        81 lv~e~~~-~~l~~~~~-------~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~  149 (372)
T cd07853          81 VVTELMQ-SDLHKIIV-------SPQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGL  149 (372)
T ss_pred             EEeeccc-cCHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccc
Confidence            9999997 48888875       4567999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCcc-----cccccccccccccc-------CCCcccHHHHHHHHhhcccccccc------cc-------------
Q 045682          210 SISIPEGEL-----LTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEII------DP-------------  258 (309)
Q Consensus       210 a~~~~~~~~-----~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~-------------  258 (309)
                      ++.......     ..+...|.+|+...       ..+.|+++..++.++.+.....-.      +.             
T Consensus       150 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~  229 (372)
T cd07853         150 ARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM  229 (372)
T ss_pred             eeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence            976533221     12233344444322       235566666666665443221100      00             


Q ss_pred             ----------cccCCCCCCc-------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 ----------LIMGDRSCSG-------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ----------~~~g~~~~~~-------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                ........+.       ....++++.+|+.+||+.||++|||+.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         230 RSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence                      0000000000       0122467889999999999999999999975

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.7e-33  Score=249.99  Aligned_cols=219  Identities=17%  Similarity=0.203  Sum_probs=172.1

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      ++||+|+||.||+|.+  +++.||+|.+....   ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            3699999999999998  78899999987532   23445688999999998 799999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC--
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE--  215 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~--  215 (309)
                      |+|.+++.       ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++....  
T Consensus        81 g~L~~~~~-------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~  150 (329)
T cd05588          81 GDLMFHMQ-------RQRKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG  150 (329)
T ss_pred             CCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCC
Confidence            99999986       4567999999999999999999999   99999999999999999999999999999875321  


Q ss_pred             --Cccccccccccccccc------cCCCcccHHHHHHHHhhcccccccc---------------cccccCCCCCCchHHH
Q 045682          216 --GELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEII---------------DPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       216 --~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~g~~~~~~~~~~  272 (309)
                        .....|...|.+|+..      ...+.|+++..++.++.+....+..               .....+..  ..+...
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~  228 (329)
T cd05588         151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--RIPRSL  228 (329)
T ss_pred             CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC--CCCCCC
Confidence              1223455555555532      2357788888888887655433211               11111111  122345


Q ss_pred             HHHHHHHHHHcccCCCCCCCCH
Q 045682          273 LQAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~  294 (309)
                      +.++.+++.+||+.||.+|||+
T Consensus       229 ~~~~~~li~~~L~~dP~~R~~~  250 (329)
T cd05588         229 SVKASSVLKGFLNKDPKERLGC  250 (329)
T ss_pred             CHHHHHHHHHHhccCHHHcCCC
Confidence            6779999999999999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-34  Score=228.32  Aligned_cols=247  Identities=18%  Similarity=0.187  Sum_probs=196.7

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----Cc
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----QI  127 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~  127 (309)
                      ...++|.....||+|||+.||.+..  ++..+|+|++......+.+..++|++..++++||||+++++++..+     .+
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            3456788889999999999999987  8899999999888777888899999999999999999999988643     35


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .||++.|...|||.+.+.....   .+..+++.+.+.|+.+|++||.+||.. ..++.||||||.|||+.+++.++|.||
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~---kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~  173 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKI---KGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL  173 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhh---cCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence            9999999999999999875432   456799999999999999999999933 224999999999999999999999999


Q ss_pred             ccccccCCCc-------------ccccccccccccc---------ccCCCcccHHHHHHHHhhcccccc--------ccc
Q 045682          208 SFSISIPEGE-------------LLTGLRAFDLARL---------NEDDGYVALRDHVKKYFEEDRLNE--------IID  257 (309)
Q Consensus       208 g~a~~~~~~~-------------~~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  257 (309)
                      |.+...+-..             .-.-..||.+|+.         .+..+.|+++...+.++.+.+..+        +.-
T Consensus       174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL  253 (302)
T KOG2345|consen  174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL  253 (302)
T ss_pred             cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE
Confidence            9887653211             1112344444443         223467888877777655444332        233


Q ss_pred             ccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          258 PLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       258 ~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      ++..+...++.....++.+.+|+..|++.||.+||++.+++..++++.
T Consensus       254 Av~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  254 AVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             eeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            444556666655678899999999999999999999999999998764

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.5e-33  Score=243.59  Aligned_cols=232  Identities=19%  Similarity=0.218  Sum_probs=175.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+....||+|+||.||+|.+  +++.||+|++....  ....+.+.+|+.++.+++||||+++++++......++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            3578888999999999999998  68999999886542  2234568899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|..++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++...
T Consensus        81 ~~~~~~l~~~~~-------~~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  150 (286)
T cd07847          81 YCDHTVLNELEK-------NPRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARIL  150 (286)
T ss_pred             ccCccHHHHHHh-------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceec
Confidence            999988888864       4456899999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCc----cccccccccccccc-------cCCCcccHHHHHHHHhhcccccc------cc-----------c-------c
Q 045682          214 PEGE----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNE------II-----------D-------P  258 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~-----------~-------~  258 (309)
                      ....    ...+...+.+|+..       ...+.|+++..++.++.+.....      ..           .       .
T Consensus       151 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07847         151 TGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFST  230 (286)
T ss_pred             CCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccc
Confidence            5432    22233344444321       23466677777777765432110      00           0       0


Q ss_pred             --cccCCCCCCc---------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 --LIMGDRSCSG---------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 --~~~g~~~~~~---------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                        ...+...+.+         ....+..+.+|+.+||+.+|++|||+.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         231 NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence              0000000000         0123567899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-33  Score=244.59  Aligned_cols=234  Identities=15%  Similarity=0.206  Sum_probs=183.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|+..+.||.|+||.||+|.+  ++..+|+|.+........+.+..|+.++++++||||+++++++..+...++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            45688888999999999999998  6789999998776656667899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        84 ~~~~~L~~~~~~------~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~  154 (280)
T cd06611          84 CDGGALDSIMLE------LERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNK  154 (280)
T ss_pred             cCCCcHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence            999999999852      2356999999999999999999999   9999999999999999999999999999886543


Q ss_pred             CC----ccccccccccccccc-----------cCCCcccHHHHHHHHhhccccccc------ccccccCCCCC-CchHHH
Q 045682          215 EG----ELLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSC-SGKEQQ  272 (309)
Q Consensus       215 ~~----~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~-~~~~~~  272 (309)
                      ..    ....|...+..++..           ...+.|+++..+|.++.+......      +.....+..+. ..+...
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
T cd06611         155 STLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKW  234 (280)
T ss_pred             ccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccC
Confidence            22    122233333333321           134677777777777665443221      11222222211 122355


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+++..||+.+|.+|||+.++++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         235 SSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHhc
Confidence            678999999999999999999999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6e-34  Score=255.32  Aligned_cols=232  Identities=20%  Similarity=0.247  Sum_probs=197.0

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ..+.|.....||+|.|+.|..|++  ++..||||.++...  ......+.+|++++..++|||||+++.+......+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            457788999999999999999999  89999999998764  23334588999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+.+|.+++|+.       ..+.+.+..+..++.|+++|++|||   ++.|||||||++|||++.+.++||+|||++.
T Consensus       134 ~eya~~ge~~~yl~-------~~gr~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~  203 (596)
T KOG0586|consen  134 MEYASGGELFDYLV-------KHGRMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFST  203 (596)
T ss_pred             EEeccCchhHHHHH-------hcccchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccce
Confidence            99999999999997       4456666888899999999999999   9999999999999999999999999999998


Q ss_pred             ccCCC---ccccccccccccccccCCCcccHHHHHHHH-------------hhcccccccccccccCCCCCCchHHHHHH
Q 045682          212 SIPEG---ELLTGLRAFDLARLNEDDGYVALRDHVKKY-------------FEEDRLNEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       212 ~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .+..+   +..+|.+|+.+++...+..+.....++|..             |++..+.++-++.+.|.+..+  ...+.+
T Consensus       204 ~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp--~~ms~d  281 (596)
T KOG0586|consen  204 FFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIP--FYMSCD  281 (596)
T ss_pred             eecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeeccc--ceeech
Confidence            87654   468899999999988776666666666654             455556666666666665432  244567


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+|+.+.+-.+|..|++++++++
T Consensus       282 ce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  282 CEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             hHHHHHHhhccCccccCCHHHhhh
Confidence            899999999999999999999974

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.5e-33  Score=243.27  Aligned_cols=241  Identities=18%  Similarity=0.244  Sum_probs=182.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .+|+..+.||+|+||.||++..       ++..+|+|.+..........+.+|+.++..++|+||+++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            4577788999999999999964       356899999877666666789999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCC--------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          131 VFEYINCGSLADRIRIQHN--------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~--------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      +|||+++++|.+++..+..        .......+++..++.++.|++.|++|||   +.+++|+||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence            9999999999999864321        0111245899999999999999999999   9999999999999999999999


Q ss_pred             EEeecccccccCCCcc------ccccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCC
Q 045682          203 KLFDFSFSISIPEGEL------LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGD  263 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~~------~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~  263 (309)
                      ||+|||++........      ..+...+.+|+..      ...+.|+++..+++++. +...      .+.++....+.
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR  241 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc
Confidence            9999999875533221      1112233334322      22466777777777654 2221      11222233332


Q ss_pred             CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          264 RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       264 ~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      .. ..+..++..+.+|+.+||+.||.+||++.+|.+.|+
T Consensus       242 ~~-~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         242 EL-ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             cC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            22 122355678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=5.6e-33  Score=242.46  Aligned_cols=234  Identities=15%  Similarity=0.192  Sum_probs=182.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .+.|...+.||.|+||.||+|..  ++..+++|.+..........+.+|+.+++.++||||+++++++..++..++||||
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            35688888999999999999998  6789999999877666677899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|..++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++....
T Consensus        91 ~~~~~l~~~~~~------~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  161 (292)
T cd06644          91 CPGGAVDAIMLE------LDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV  161 (292)
T ss_pred             CCCCcHHHHHHh------hcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence            999999988741      2456899999999999999999999   8999999999999999999999999999886542


Q ss_pred             CC----ccccccccccccccc-----------cCCCcccHHHHHHHHhhccccccccc------ccccCCCC-CCchHHH
Q 045682          215 EG----ELLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLNEIID------PLIMGDRS-CSGKEQQ  272 (309)
Q Consensus       215 ~~----~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~-~~~~~~~  272 (309)
                      ..    ....+...+.+++..           ...+.|+++..+|.++.+.......+      ....+..+ ...+...
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (292)
T cd06644         162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKW  241 (292)
T ss_pred             ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCccc
Confidence            21    122333344444322           13467777777787765543322111      11111111 1122345


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+++.+||+.+|++||++.++++
T Consensus       242 ~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         242 SMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            678999999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-33  Score=243.67  Aligned_cols=231  Identities=16%  Similarity=0.176  Sum_probs=177.7

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +|+..+.||+|+||.||++..  +++.||+|.+....   ......+.+|+.++..++||||+++++++..++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            367788999999999999998  68999999986542   1223457889999999999999999999999899999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++|+|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||||+||++++++.++|+|||++...
T Consensus        81 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05605          81 LMNGGDLKFHIYNM-----GNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEI  152 (285)
T ss_pred             ccCCCcHHHHHHhc-----CcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceec
Confidence            99999999887521     2356899999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCcc---ccccccccccccc------cCCCcccHHHHHHHHhhcccccc----------cccccccCCCCCCchHHHHH
Q 045682          214 PEGEL---LTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE----------IIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       214 ~~~~~---~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~  274 (309)
                      .....   ..|...+.+++..      ...+.|+++..++.++.+.....          +...+..+  +...+...+.
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  230 (285)
T cd05605         153 PEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED--QEEYSEKFSE  230 (285)
T ss_pred             CCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc--ccccCcccCH
Confidence            44332   2344444444432      23467777777777765543221          11111111  1112234667


Q ss_pred             HHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      .+.+|+..||+.||.+||     ++.++++
T Consensus       231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         231 AARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             HHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            899999999999999999     7778754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.8e-33  Score=249.25  Aligned_cols=224  Identities=16%  Similarity=0.197  Sum_probs=175.7

Q ss_pred             CceeecCCeEEEEEEe-----CCeEEEEEEecCCC----chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           64 KVIMKRSFYTLYKGFC-----QERLISVMKFDASK----PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +.||+|+||.||++..     +++.||+|.+....    ......+.+|+.++..++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999986     46889999986531    23335678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus        82 ~~~~~L~~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  151 (323)
T cd05584          82 LSGGELFMHLE-------REGIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESI  151 (323)
T ss_pred             CCCchHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecc
Confidence            99999999986       4567888999999999999999999   9999999999999999999999999999987542


Q ss_pred             CCc----cccccccccccccc------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ...    ...|...|.+|+..      ...+.|+++..++.++.+....      ..+.....+....  +...+..+.+
T Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  229 (323)
T cd05584         152 HEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNL--PPYLTPEARD  229 (323)
T ss_pred             cCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHH
Confidence            221    23455556665542      2357788888888876554321      2223333333222  2245678999


Q ss_pred             HHHHcccCCCCCCC-----CHHHHHH
Q 045682          279 LIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      ++..||+.+|++||     ++.++++
T Consensus       230 li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         230 LLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            99999999999999     7777754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=3.4e-33  Score=244.55  Aligned_cols=231  Identities=17%  Similarity=0.232  Sum_probs=180.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ++|...+.||+|+||.||+|..  +++.||+|.+........+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            6688889999999999999997  78999999997765555677899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++.        ...+++.++..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....
T Consensus        99 ~~~~L~~~~~--------~~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~  167 (297)
T cd06656          99 AGGSLTDVVT--------ETCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (297)
T ss_pred             CCCCHHHHHH--------hCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence            9999999985        346889999999999999999999   89999999999999999999999999999876543


Q ss_pred             Cc----ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------ccccccc-CCCCCCchHHHHHHHHH
Q 045682          216 GE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLIM-GDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-g~~~~~~~~~~~~~l~~  278 (309)
                      ..    ...+...+..|+...      ..+.|+++..++.++.+.....      ....... +......+...+..+.+
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (297)
T cd06656         168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRD  247 (297)
T ss_pred             CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHH
Confidence            32    223334444444322      2345556656666554443211      1111111 22222233455677899


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+||+.+|++|||+.+|++
T Consensus       248 li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         248 FLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.3e-33  Score=237.23  Aligned_cols=234  Identities=20%  Similarity=0.260  Sum_probs=181.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|+..+.||+|+||.||+|..  ++..+++|.+........+.+.+|+.++++++||||+++++++......+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46788889999999999999998  6788999998776555667899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++....
T Consensus        82 ~~~~~l~~~~~~------~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  152 (262)
T cd06613          82 CGGGSLQDIYQV------TRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLT  152 (262)
T ss_pred             CCCCcHHHHHHh------hccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhh
Confidence            999999999861      2367899999999999999999999   8999999999999999999999999999987654


Q ss_pred             CC----cccccccccccccccc---------CCCcccHHHHHHHHhhccccccc------ccccccCCC---CCCchHHH
Q 045682          215 EG----ELLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDR---SCSGKEQQ  272 (309)
Q Consensus       215 ~~----~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~---~~~~~~~~  272 (309)
                      ..    ....+...+.+++...         ..+.|+++..++.++.+.....-      .........   ....+...
T Consensus       153 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (262)
T cd06613         153 ATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKW  232 (262)
T ss_pred             hhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhh
Confidence            32    1223333444444322         23566667677776654432111      111111111   11123355


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+++.+||+.+|.+|||+.+|+.
T Consensus       233 ~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         233 SPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            678999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.6e-33  Score=239.90  Aligned_cols=230  Identities=22%  Similarity=0.296  Sum_probs=175.5

Q ss_pred             CceeecCCeEEEEEEe-C--C--eEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC-Q--E--RLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|++|.||+|.+ +  +  ..||+|.+..... ...+.+.+|+.++++++||||+++++.+.. ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            3689999999999998 2  2  3689999887655 566789999999999999999999999988 889999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      ++|.+++...     ....+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++.......
T Consensus        80 ~~L~~~l~~~-----~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~  151 (257)
T cd05040          80 GSLLDRLRKD-----ALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE  151 (257)
T ss_pred             CcHHHHHHhc-----ccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccc
Confidence            9999998621     1157899999999999999999999   9999999999999999999999999999998764421


Q ss_pred             -------ccccccccccccc------ccCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHHHH
Q 045682          218 -------LLTGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       218 -------~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                             ...+...+..++.      ....+.|+++..++.++. +....      ++.............+...+..+.
T Consensus       152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (257)
T cd05040         152 DHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIY  231 (257)
T ss_pred             cceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHH
Confidence                   1112223333332      123467777777777764 33221      111111111111112234567899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      +++.+||+.+|++|||+.+|++.|.
T Consensus       232 ~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         232 NVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHCCCCcccCCCHHHHHHHhc
Confidence            9999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3e-33  Score=248.30  Aligned_cols=219  Identities=20%  Similarity=0.229  Sum_probs=171.7

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|..  +++.||+|.+...   .......+.+|+.++.++ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            3699999999999998  6789999998764   223445678899988877 899999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC--
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE--  215 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~--  215 (309)
                      |+|..++.       ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||+++....  
T Consensus        81 ~~L~~~~~-------~~~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~  150 (329)
T cd05618          81 GDLMFHMQ-------RQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  150 (329)
T ss_pred             CCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC
Confidence            99999886       4567999999999999999999999   99999999999999999999999999999875321  


Q ss_pred             --Cccccccccccccccc------cCCCcccHHHHHHHHhhccccccc---------------ccccccCCCCCCchHHH
Q 045682          216 --GELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEI---------------IDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       216 --~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~g~~~~~~~~~~  272 (309)
                        .....|...|.+|+..      ...+.|+++..++.++.+......               ......+..  ..+...
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~  228 (329)
T cd05618         151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSL  228 (329)
T ss_pred             CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC--CCCCCC
Confidence              1233455556555532      245778888888888765443211               111111111  122345


Q ss_pred             HHHHHHHHHHcccCCCCCCCCH
Q 045682          273 LQAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~  294 (309)
                      +..+.+++.+||+.||.+|||+
T Consensus       229 ~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         229 SVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CHHHHHHHHHHhcCCHHHcCCC
Confidence            6778999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=9.8e-34  Score=251.80  Aligned_cols=229  Identities=14%  Similarity=0.171  Sum_probs=177.5

Q ss_pred             CCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCC----CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCce
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDAS----KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  128 (309)
                      +|+..+.||+|+||.||++..     ++..||+|.+...    .....+.+..|+.++..+ +||||+++++++..++..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            477788999999999999876     5688999998643    123345678899999999 699999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus        81 ~lv~e~~~~g~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG  150 (332)
T cd05614          81 HLILDYVSGGEMFTHLY-------QRDNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFG  150 (332)
T ss_pred             EEEEeCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCc
Confidence            99999999999999986       4567899999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCc-----cccccccccccccc-------cCCCcccHHHHHHHHhhcccccc----------cccccccCCCCC
Q 045682          209 FSISIPEGE-----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNE----------IIDPLIMGDRSC  266 (309)
Q Consensus       209 ~a~~~~~~~-----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~  266 (309)
                      ++.......     ...|...|.+|+..       ...+.|+++..++.++.+.....          +.........  
T Consensus       151 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--  228 (332)
T cd05614         151 LSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP--  228 (332)
T ss_pred             CCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC--
Confidence            997653221     23455566555532       23467778877777765543321          1111111111  


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      ..+...+..+.+++.+||+.||++||     ++.++++
T Consensus       229 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         229 PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            11224567789999999999999999     6667753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3.8e-33  Score=248.19  Aligned_cols=248  Identities=17%  Similarity=0.283  Sum_probs=185.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEeC---------CeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFCQ---------ERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      ...+|...+.||+|+||.||+|.+.         ...||+|.+.... ......+.+|+.++.++ +||||+++++++..
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            3456888999999999999999751         1368999887542 33457799999999999 89999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCee
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL  195 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nil  195 (309)
                      ++..++++||+++|+|.+++......         ......+++.+++.++.|++.||+|||   +.+++||||||+|||
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nil  166 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVL  166 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEE
Confidence            99999999999999999998642210         012346889999999999999999999   999999999999999


Q ss_pred             ecCCCcEEEeecccccccCCCc----ccccc--ccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccc
Q 045682          196 FNEENVAKLFDFSFSISIPEGE----LLTGL--RAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEII  256 (309)
Q Consensus       196 l~~~~~~kl~Dfg~a~~~~~~~----~~~g~--~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~  256 (309)
                      ++.++.+||+|||+++......    ...+.  ..+.+++..      ...+.|+++..+++++. +..      ..+..
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~  246 (334)
T cd05100         167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF  246 (334)
T ss_pred             EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            9999999999999987654321    11111  223333322      12456677777776654 221      12233


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .....+.. ...+...+.++.+++.+||+.+|++|||+.++++.|+++...
T Consensus       247 ~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         247 KLLKEGHR-MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             HHHHcCCC-CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence            33322222 122235567899999999999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-33  Score=253.88  Aligned_cols=231  Identities=14%  Similarity=0.121  Sum_probs=178.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|..  +++.||||++....   ......+.+|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4688899999999999999998  78999999986532   234456789999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        81 E~~~~g~L~~~l~-------~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  150 (364)
T cd05599          81 EYLPGGDMMTLLM-------KKDTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTG  150 (364)
T ss_pred             CCCCCcHHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeeccccee
Confidence            9999999999986       4557999999999999999999999   99999999999999999999999999999875


Q ss_pred             cCCCc------------------------------------------cccccccccccccc------cCCCcccHHHHHH
Q 045682          213 IPEGE------------------------------------------LLTGLRAFDLARLN------EDDGYVALRDHVK  244 (309)
Q Consensus       213 ~~~~~------------------------------------------~~~g~~~~~~~~~~------~~~~~~~~~~~~~  244 (309)
                      .....                                          ...|...+.+|+..      ...+.|+++..++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  230 (364)
T cd05599         151 LKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMY  230 (364)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHH
Confidence            43211                                          11245555555432      2346788888888


Q ss_pred             HHhhccccc------ccccccccCC--CCCCchHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 045682          245 KYFEEDRLN------EIIDPLIMGD--RSCSGKEQQLQAYAHLIFECVNESPVDRPT---MVDVAK  299 (309)
Q Consensus       245 ~~~~~~~~~------~~~~~~~~g~--~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt---~~~l~~  299 (309)
                      .++.+....      +....+..+.  ...+.....++++.+++.+|+. +|.+|++   +.++++
T Consensus       231 el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         231 EMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             HhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            776554321      1111121111  1111112346788999999997 9999998   888764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=2.5e-33  Score=246.70  Aligned_cols=232  Identities=16%  Similarity=0.146  Sum_probs=170.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|...+.||+|+||.||+|..  ++..||+|.+.... ......+.+|+.+++.++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            4588889999999999999998  77889999987543 23335678999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++ +|.+++..      ....+++..+..++.|++.||+|||   +.+|+||||||+||+++.++.+||+|||++....
T Consensus        86 ~~~-~l~~~~~~------~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          86 LDK-DLKQYMDD------CGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKS  155 (309)
T ss_pred             CCC-CHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecC
Confidence            986 88888751      2345889999999999999999999   9999999999999999999999999999987543


Q ss_pred             CCc----cccccccccccccccC-------CCcccHHHHHHHHhhccccc------cccccccc--C-------------
Q 045682          215 EGE----LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLN------EIIDPLIM--G-------------  262 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--g-------------  262 (309)
                      ...    ...+...+.+|+....       .+.|+++..++.++.+....      +.+.....  +             
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (309)
T cd07872         156 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSN  235 (309)
T ss_pred             CCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence            221    1223344444443222       23455555555554443211      00000000  0             


Q ss_pred             ------CCCCC-------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 ------DRSCS-------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ------~~~~~-------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                            ..+..       .....+.++.+|+.+||+.||.+|||+.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence                  00000       00123567889999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1e-33  Score=237.00  Aligned_cols=227  Identities=16%  Similarity=0.230  Sum_probs=169.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv  131 (309)
                      +.|+..+.|++|+||.||+|++  +++.||+|+++...  ....-.-++||.+|.+++|||||.+-.+...  -+..|+|
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            4577888999999999999999  88999999997754  3333456899999999999999999888765  3469999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      ||||+. +|...+.      .-.+++...++..++.|+++|++|||   .+-|+||||||+|+|+++.|.+||+|||+|+
T Consensus       156 Me~~Eh-DLksl~d------~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR  225 (419)
T KOG0663|consen  156 MEYVEH-DLKSLME------TMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAR  225 (419)
T ss_pred             HHHHHh-hHHHHHH------hccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhh
Confidence            999997 9999986      23468999999999999999999999   9999999999999999999999999999999


Q ss_pred             ccCCC----------------ccccccccccccccccCCCcccHHHHHHHHhhcccc------ccccc-----------c
Q 045682          212 SIPEG----------------ELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRL------NEIID-----------P  258 (309)
Q Consensus       212 ~~~~~----------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----------~  258 (309)
                      .+.+.                +++.|...+..+.     +.|+++..+.+++....+      .+-++           .
T Consensus       226 ~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~i-----DMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~  300 (419)
T KOG0663|consen  226 EYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAV-----DMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA  300 (419)
T ss_pred             hhcCCcccCcceEEEeeecCHHHhcCCcccCcch-----hhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence            87543                1334444433322     556666665555322111      00000           0


Q ss_pred             cccCCC----------CCCch---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 LIMGDR----------SCSGK---------EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ~~~g~~----------~~~~~---------~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +..|..          +..+.         ...++.-.+|+...+..||.+|.|+.+.++
T Consensus       301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            011100          00000         013466789999999999999999998764

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.3e-33  Score=253.16  Aligned_cols=225  Identities=15%  Similarity=0.094  Sum_probs=170.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .+|+..+.||+|+||.||++..  +++.||+|....      ..+.+|+.++++++||||+++++++......++|+|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            5799999999999999999998  789999997432      34678999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      . ++|..++.       ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus       166 ~-~~L~~~l~-------~~~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~  234 (391)
T PHA03212        166 K-TDLYCYLA-------AKRNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVD  234 (391)
T ss_pred             C-CCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence            6 58998876       4567899999999999999999999   89999999999999999999999999999865322


Q ss_pred             C-----cccccccccccccccc------CCCcccHHHHHHHHhhcccc-cc----------------ccccc--------
Q 045682          216 G-----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL-NE----------------IIDPL--------  259 (309)
Q Consensus       216 ~-----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~----------------~~~~~--------  259 (309)
                      .     ....|...+.+|+...      ..+.|+++..++.++.+... ..                ++...        
T Consensus       235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~  314 (391)
T PHA03212        235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP  314 (391)
T ss_pred             ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence            1     1234555555555432      23455666666666544311 00                00000        


Q ss_pred             --------------cc------CCCC-CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 --------------IM------GDRS-CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 --------------~~------g~~~-~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    ..      +..+ +......+.++.+|+.+||+.||.+|||+.|+++
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                          00      0000 0000123567899999999999999999999984

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=6.4e-33  Score=237.26  Aligned_cols=233  Identities=15%  Similarity=0.180  Sum_probs=178.0

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +|+..+.||+|+||.||++.+  ++..+|+|.+... .....+.+.+|+.++..++||||+++++++.+++..+++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            467788999999999999998  7899999998643 2344567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++.....
T Consensus        81 ~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  152 (255)
T cd08219          81 DGGDLMQKIKLQ-----RGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS  152 (255)
T ss_pred             CCCcHHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence            999999987521     3456889999999999999999999   99999999999999999999999999999876543


Q ss_pred             Cc----ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHH
Q 045682          216 GE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..    ...|...+.+|+...      ..+.|+++..++.++.+...      .........+..... +...+..+.+|
T Consensus       153 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  231 (255)
T cd08219         153 PGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL-PSHYSYELRSL  231 (255)
T ss_pred             cccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC-CcccCHHHHHH
Confidence            22    223333344444322      23455555555555433222      112222223333222 23556789999


Q ss_pred             HHHcccCCCCCCCCHHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      +.+||+.||++|||+.+|+..
T Consensus       232 i~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         232 IKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHhCCcccCCCHHHHhhc
Confidence            999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=6.5e-33  Score=238.73  Aligned_cols=229  Identities=19%  Similarity=0.234  Sum_probs=177.3

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch---------hHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR---------MYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      |.....||+|+||.||+|..  ++..+|+|.+......         ..+.+.+|+.++++++||||+++++++.+....
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            56678999999999999998  6789999988654221         225688999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      +++|||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||
T Consensus        82 ~lv~e~~~~~~L~~~l~-------~~~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg  151 (267)
T cd06628          82 NIFLEYVPGGSVAALLN-------NYGAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFG  151 (267)
T ss_pred             EEEEEecCCCCHHHHHH-------hccCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccC
Confidence            99999999999999986       4567899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCc----------cccccccccccccc------cCCCcccHHHHHHHHhhccccccc------ccccccCCCCC
Q 045682          209 FSISIPEGE----------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSC  266 (309)
Q Consensus       209 ~a~~~~~~~----------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~  266 (309)
                      +++......          ...|...+.+++..      ...+.|+++..++.++.+.....-      +.....+.. .
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~  230 (267)
T cd06628         152 ISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS-P  230 (267)
T ss_pred             CCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC-C
Confidence            987665221          12233344444321      234667777777777655432111      111111111 1


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+...+..+.+++.+||+++|.+||++.+|++
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         231 EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            222356688999999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.7e-33  Score=249.14  Aligned_cols=223  Identities=18%  Similarity=0.240  Sum_probs=174.7

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  +++.||+|.+...   .......+..|..++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3689999999999998  6789999998653   223445678899999876 899999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      |+|..++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.......
T Consensus        81 ~~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~  150 (321)
T cd05591          81 GDLMFQIQ-------RSRKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG  150 (321)
T ss_pred             CcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCC
Confidence            99999986       4567899999999999999999999   9999999999999999999999999999987542221


Q ss_pred             ----cccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          218 ----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       218 ----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                          ...|...|.+|+..      ...+.|+++..++.++.+...      .+.+..+..+....  +...+.++.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~ll~  228 (321)
T cd05591         151 VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLY--PVWLSKEAVSILK  228 (321)
T ss_pred             ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHHHHH
Confidence                23355555555432      235778888888888655432      22333333333221  1234578999999


Q ss_pred             HcccCCCCCCC-------CHHHHH
Q 045682          282 ECVNESPVDRP-------TMVDVA  298 (309)
Q Consensus       282 ~Cl~~~P~~RP-------t~~~l~  298 (309)
                      .||+.||++||       ++.+++
T Consensus       229 ~~L~~dp~~R~~~~~~~~~~~~~~  252 (321)
T cd05591         229 AFMTKNPNKRLGCVASQGGEDAIK  252 (321)
T ss_pred             HHhccCHHHcCCCCCCCCCHHHHh
Confidence            99999999999       667665

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1e-33  Score=251.47  Aligned_cols=232  Identities=13%  Similarity=0.087  Sum_probs=175.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||++..  +++.||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            3688889999999999999998  78999999987642   234456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++..      ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        81 e~~~~~~L~~~l~~------~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~  151 (330)
T cd05601          81 EYQPGGDLLSLLNR------YEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAAR  151 (330)
T ss_pred             CCCCCCCHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeE
Confidence            99999999999862      2357999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc-----ccccccccccccccc------------CCCcccHHHHHHHHhhccccc------ccccccccCCC--CCC
Q 045682          213 IPEGE-----LLTGLRAFDLARLNE------------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDR--SCS  267 (309)
Q Consensus       213 ~~~~~-----~~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~--~~~  267 (309)
                      .....     ...|...|.+|+...            ..+.|+++..++.++.+....      ..+..+.....  ..+
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  231 (330)
T cd05601         152 LTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFP  231 (330)
T ss_pred             CCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCC
Confidence            65432     123555555555422            234444444444443322111      11111111111  111


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .....+.++.+|+..||+ +|.+|||+.+++.
T Consensus       232 ~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         232 EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            112346779999999998 9999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.6e-33  Score=249.18  Aligned_cols=219  Identities=18%  Similarity=0.255  Sum_probs=172.4

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|..  +++.||+|.+...   .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999998  6789999998653   223445678888888877 799999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|.+++.       ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++..... 
T Consensus        81 g~L~~~i~-------~~~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~  150 (320)
T cd05590          81 GDLMFHIQ-------KSRRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG  150 (320)
T ss_pred             chHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC
Confidence            99999986       4567999999999999999999999   999999999999999999999999999998754221 


Q ss_pred             ---cccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+|+...      ..+.|+++..++.++.+...      .++...+..+....  +...+.++.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~li~  228 (320)
T cd05590         151 KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTWLSQDAVDILK  228 (320)
T ss_pred             CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCHHHHHHHH
Confidence               1234555565555322      34778888888877654432      22233333332221  2245678999999


Q ss_pred             HcccCCCCCCCCH
Q 045682          282 ECVNESPVDRPTM  294 (309)
Q Consensus       282 ~Cl~~~P~~RPt~  294 (309)
                      .||+.||.+||++
T Consensus       229 ~~L~~dP~~R~~~  241 (320)
T cd05590         229 AFMTKNPTMRLGS  241 (320)
T ss_pred             HHcccCHHHCCCC
Confidence            9999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.7e-33  Score=241.73  Aligned_cols=236  Identities=19%  Similarity=0.236  Sum_probs=178.1

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeC------
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLET------  125 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~------  125 (309)
                      .+++.|+..+.||+|+||.||+|.+  +++.||+|.+.... .....+..|+.++..+ +||||+++++++...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            3567788888999999999999998  67899999986553 3346788999999998 799999999998753      


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ...+++|||+++++|.+++...     ....+++..+..++.|++.||+|||   +.+++|+||+|+||++++++.++|+
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~-----~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~  153 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNT-----KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLV  153 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEc
Confidence            3578999999999999998621     2356899999999999999999999   8999999999999999999999999


Q ss_pred             ecccccccCCC----ccccccccccccccc-----------cCCCcccHHHHHHHHhhccccccccccc------ccCCC
Q 045682          206 DFSFSISIPEG----ELLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLNEIIDPL------IMGDR  264 (309)
Q Consensus       206 Dfg~a~~~~~~----~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~  264 (309)
                      |||++......    ....|...+.+|+..           ...+.|+++..+|.++.+.......+..      .....
T Consensus       154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~  233 (272)
T cd06637         154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA  233 (272)
T ss_pred             cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCC
Confidence            99998765322    122344334444422           1246677777777776554332111100      01111


Q ss_pred             CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 ~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.......+.++.+|+.+||+.+|.+|||+.++++
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         234 PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            11112245578999999999999999999999874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=4.2e-33  Score=239.19  Aligned_cols=238  Identities=17%  Similarity=0.237  Sum_probs=181.7

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ...+.|...+.||+|+||.||+|.+ .+..+++|.+.... .....+.+|+.+++.++|+||+++++++.. ...+++||
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e   80 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE   80 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence            3456788899999999999999988 66789999876543 334678999999999999999999999887 77899999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++...
T Consensus        81 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  152 (260)
T cd05073          81 FMAKGSLLDFLKSD-----EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVI  152 (260)
T ss_pred             eCCCCcHHHHHHhC-----CccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeec
Confidence            99999999998621     3456889999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCccc-----ccccccccccc------ccCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHH
Q 045682          214 PEGELL-----TGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       214 ~~~~~~-----~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      ......     .+...+.+|+.      ....+.|+++..++.++. +....      ....... +......+...+.+
T Consensus       153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  231 (260)
T cd05073         153 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPRPENCPEE  231 (260)
T ss_pred             cCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-CCCCCCCcccCCHH
Confidence            433211     11122333332      223467777777776664 33211      1121111 22222222355678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      +.+++.+||+.+|++||++.++.+.|+.
T Consensus       232 ~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         232 LYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            9999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=4.4e-33  Score=252.13  Aligned_cols=231  Identities=14%  Similarity=0.091  Sum_probs=178.1

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .|+..+.||+|+||+||+|..  +++.||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            577889999999999999998  77899999986532   2344678899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++|+|.+++.       ....+++..+..++.||+.||.|||   ..+|+||||||+|||++.++.+||+|||++...
T Consensus        82 ~~~gg~L~~~l~-------~~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          82 YIPGGDMMSLLI-------RMEVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             cCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            999999999986       4567899999999999999999999   999999999999999999999999999997543


Q ss_pred             CCC---------------------------------------------------ccccccccccccccc------cCCCc
Q 045682          214 PEG---------------------------------------------------ELLTGLRAFDLARLN------EDDGY  236 (309)
Q Consensus       214 ~~~---------------------------------------------------~~~~g~~~~~~~~~~------~~~~~  236 (309)
                      ...                                                   ....|...|.+|+..      ...+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di  231 (381)
T cd05626         152 RWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDW  231 (381)
T ss_pred             ccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccce
Confidence            100                                                   012355556555532      23577


Q ss_pred             ccHHHHHHHHhhcccccc------ccccccc--CCCCCCchHHHHHHHHHHHHH--cccCCCCCCCCHHHHHH
Q 045682          237 VALRDHVKKYFEEDRLNE------IIDPLIM--GDRSCSGKEQQLQAYAHLIFE--CVNESPVDRPTMVDVAK  299 (309)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~------~~~~~~~--g~~~~~~~~~~~~~l~~li~~--Cl~~~P~~RPt~~~l~~  299 (309)
                      |+++..+++++.+.....      ....+..  .....+.....+.++.+|+..  |+..+|..||++.+++.
T Consensus       232 wSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         232 WSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             eehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            888888888766543221      1111111  111222222456778889987  66777778999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=6.7e-33  Score=239.30  Aligned_cols=238  Identities=20%  Similarity=0.230  Sum_probs=174.9

Q ss_pred             CceeecCCeEEEEEEe--CC--eEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QE--RLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  ++  ..+++|.+.... ......+.+|+.++.++ +||||+++++++...+..+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            3689999999999998  33  357888887543 34456789999999999 899999999999999999999999999


Q ss_pred             CChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          138 GSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       138 gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      |+|.+++......         ......+++.++..++.|++.||+|||   +.+++|+||||+||+++.++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence            9999998632210         112345889999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCC---cccccccccccccc------ccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHH
Q 045682          209 FSISIPEG---ELLTGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       209 ~a~~~~~~---~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~  272 (309)
                      ++......   ........+.+++.      ....+.|+++..+++++. +...      .+.......+.. ...+...
T Consensus       158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~  236 (270)
T cd05047         158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-LEKPLNC  236 (270)
T ss_pred             CccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC-CCCCCcC
Confidence            98643211   11111111223332      123466777777777663 2221      112222222211 1122245


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      +.++.+|+.+||+.+|.+|||+.+++++|.++.
T Consensus       237 ~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         237 DDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            578999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.9e-33  Score=253.18  Aligned_cols=235  Identities=14%  Similarity=0.156  Sum_probs=182.8

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      ....++|+..+.||+|+||.||++.+  +++.+|+|.+...   .......+.+|+.+++.++||||+++++++.+++..
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            33457799999999999999999999  6789999998642   223345688999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|.+++.        ...+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       119 ~lv~Ey~~gg~L~~~l~--------~~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG  187 (370)
T cd05621         119 YMVMEYMPGGDLVNLMS--------NYDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFG  187 (370)
T ss_pred             EEEEcCCCCCcHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecc
Confidence            99999999999999985        235889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCc-----ccccccccccccc----------ccCCCcccHHHHHHHHhhccccc------ccccccccCC--CC
Q 045682          209 FSISIPEGE-----LLTGLRAFDLARL----------NEDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGD--RS  265 (309)
Q Consensus       209 ~a~~~~~~~-----~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~--~~  265 (309)
                      ++.......     ...|...|.+|+.          ....+.|+++..++.++.+....      .....+....  ..
T Consensus       188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~  267 (370)
T cd05621         188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN  267 (370)
T ss_pred             cceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC
Confidence            998764322     3346666666653          23467888888888887654321      1222222221  12


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVD--RPTMVDVAK  299 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~--RPt~~~l~~  299 (309)
                      .+.....+..+.+++..|+..+|..  |||+.++++
T Consensus       268 ~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~  303 (370)
T cd05621         268 FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ  303 (370)
T ss_pred             CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence            2222245678899999999855543  889999875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=4.4e-33  Score=241.45  Aligned_cols=226  Identities=13%  Similarity=0.169  Sum_probs=171.6

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ||+|+||.||++..  +++.+|+|.+....   ......+..|+.++.+++||||+++++++..+...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999998  68999999986432   12234566799999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc---
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE---  217 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---  217 (309)
                      .+++...     ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.++|+|||++.......   
T Consensus        81 ~~~~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~  152 (277)
T cd05607          81 KYHIYNV-----GERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTIT  152 (277)
T ss_pred             HHHHHhc-----cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceee
Confidence            9887521     3446899999999999999999999   9999999999999999999999999999987664432   


Q ss_pred             ccccccccccccc------ccCCCcccHHHHHHHHhhcccccc----------cccccccCCCCCCchHHHHHHHHHHHH
Q 045682          218 LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNE----------IIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       218 ~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                      ...|...+.+++.      ....+.|+++..++.++.+.....          +......+..... ....+.++.+|+.
T Consensus       153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  231 (277)
T cd05607         153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE-HQNFTEESKDICR  231 (277)
T ss_pred             ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc-cccCCHHHHHHHH
Confidence            1234444444443      223466777777777765443211          1111122222111 1245678999999


Q ss_pred             HcccCCCCCCCCHHHHHHH
Q 045682          282 ECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~~  300 (309)
                      .||+.||.+||++.++++.
T Consensus       232 ~~L~~~P~~R~~~~~~~~~  250 (277)
T cd05607         232 LFLAKKPEDRLGSREKNDD  250 (277)
T ss_pred             HHhccCHhhCCCCccchhh
Confidence            9999999999999776543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6.9e-33  Score=241.09  Aligned_cols=234  Identities=15%  Similarity=0.216  Sum_probs=180.8

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +|+..+.||+|+||.||++.+  ++..||+|.+... .......+.+|+.++++++||||+++++++...+..++||||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            577788999999999999999  6899999988654 3344567999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|..++...    .....+++..+..++.|++.||.|||+  ..+++|+||+|+||+++.++.+||+|||++.....
T Consensus        82 ~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  155 (286)
T cd06622          82 DAGSLDKLYAGG----VATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA  155 (286)
T ss_pred             CCCCHHHHHHhc----cccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence            999999998621    113478999999999999999999993  35999999999999999999999999999876533


Q ss_pred             Cc--ccccccccccccc------------ccCCCcccHHHHHHHHhhccccc------cc---ccccccCCCCCCchHHH
Q 045682          216 GE--LLTGLRAFDLARL------------NEDDGYVALRDHVKKYFEEDRLN------EI---IDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       216 ~~--~~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~g~~~~~~~~~~  272 (309)
                      ..  ...+..++.+++.            ....+.|+++..++.++.+....      ..   +.....+..+ ..+...
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~  234 (286)
T cd06622         156 SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP-TLPSGY  234 (286)
T ss_pred             CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC-CCCccc
Confidence            22  2223334444442            22346777777777776544321      11   1112222222 223357


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+++.+||+.+|.+||++.+++.
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         235 SDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            788999999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2.5e-33  Score=247.52  Aligned_cols=222  Identities=17%  Similarity=0.227  Sum_probs=171.2

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  +++.||+|.+....   ......+..|..++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999998  67889999986532   23334566677777765 899999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...... 
T Consensus        81 g~L~~~~~-------~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~  150 (316)
T cd05592          81 GDLMFHIQ-------SSGRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE  150 (316)
T ss_pred             CcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC
Confidence            99999986       4557899999999999999999999   999999999999999999999999999999754322 


Q ss_pred             ---ccccccccccccccc------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+|+..      ...+.|+++..++.++.+....      ++...+.... + ..+...+.++.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-~-~~~~~~~~~~~~ll~  228 (316)
T cd05592         151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR-P-HFPRWISKEAKDCLS  228 (316)
T ss_pred             CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-C-CCCCCCCHHHHHHHH
Confidence               233456666655532      2357788888888876554321      1222222111 1 112345678899999


Q ss_pred             HcccCCCCCCCCHH-HH
Q 045682          282 ECVNESPVDRPTMV-DV  297 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~-~l  297 (309)
                      .||+.+|.+||++. ++
T Consensus       229 ~~l~~~P~~R~~~~~~l  245 (316)
T cd05592         229 KLFERDPTKRLGVDGDI  245 (316)
T ss_pred             HHccCCHHHcCCChHHH
Confidence            99999999999975 44

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=1e-32  Score=242.56  Aligned_cols=232  Identities=21%  Similarity=0.291  Sum_probs=182.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ..|+..+.||+|+||.||+|..  +++.||+|.+....   ......+.+|+.++..++||||+++++++.++...++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            4577788999999999999998  68999999986432   233456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||++ |++.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..
T Consensus        95 e~~~-g~l~~~~~~------~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~  164 (307)
T cd06607          95 EYCL-GSASDILEV------HKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASL  164 (307)
T ss_pred             HhhC-CCHHHHHHH------cccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCccee
Confidence            9997 477777642      2346899999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCccccccccccccccc---------cCCCcccHHHHHHHHhhcccccccc------cccccCCCCCCchHHHHHHHH
Q 045682          213 IPEGELLTGLRAFDLARLN---------EDDGYVALRDHVKKYFEEDRLNEII------DPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       213 ~~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ........+...+.+|+..         ...+.|+++..+|.++.+.....-.      .....+..+...+..++..+.
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (307)
T cd06607         165 VSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFR  244 (307)
T ss_pred             cCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHH
Confidence            7655555555555555432         2346777888888876654322111      111122222223345678899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +++.+||+.+|++||++.+|+.
T Consensus       245 ~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         245 NFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             HHHHHHhcCChhhCcCHHHHhc
Confidence            9999999999999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-35  Score=243.69  Aligned_cols=229  Identities=21%  Similarity=0.295  Sum_probs=184.8

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      |+..++||+|+||.||+|.+  .|..||+|++...  .+..++..|+.+++++..|+||++||.+.....+|+|||||..
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            66678899999999999999  8999999998665  4567899999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |++.+.++      ....++++..+..++.+.++||.|||   ...-||||||+.|||++.+|.+||+|||.|...... 
T Consensus       113 GSiSDI~R------~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM  183 (502)
T KOG0574|consen  113 GSISDIMR------ARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM  183 (502)
T ss_pred             CcHHHHHH------HhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence            99999996      36788999999999999999999999   899999999999999999999999999999876543 


Q ss_pred             ---ccccccccccccccccCC------CcccHHHHHHHHhhccccccccc---cccc---C-CCCCCchHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRLNEIID---PLIM---G-DRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~---g-~~~~~~~~~~~~~l~~li  280 (309)
                         ..+.|.+-+.+++....-      +.|+++...-++.++.....-+.   ++..   . ...+.-|..++.++.+++
T Consensus       184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi  263 (502)
T KOG0574|consen  184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFI  263 (502)
T ss_pred             HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHH
Confidence               355677666666654322      23444444444444443222111   1111   1 112234678899999999


Q ss_pred             HHcccCCCCCCCCHHHHHH
Q 045682          281 FECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.||-++|++|-|+.++++
T Consensus       264 ~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  264 RSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             HHHhcCCHHHHHHHHHHhh
Confidence            9999999999999999875

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=6.1e-33  Score=242.85  Aligned_cols=231  Identities=16%  Similarity=0.242  Sum_probs=180.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .+|+..+.||.|+||.||+|..  +++.|++|.+........+.+.+|+.+++.++||||+++++++......++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4588888999999999999997  78999999987665555677899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++.        ...+++.++..++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus        99 ~~~~L~~~~~--------~~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~  167 (296)
T cd06655          99 AGGSLTDVVT--------ETCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP  167 (296)
T ss_pred             CCCcHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence            9999999975        346899999999999999999999   99999999999999999999999999999876543


Q ss_pred             Cc----cccccccccccccc------cCCCcccHHHHHHHHhhccccccccc------ccc-cCCCCCCchHHHHHHHHH
Q 045682          216 GE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEIID------PLI-MGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~g~~~~~~~~~~~~~l~~  278 (309)
                      ..    ...|...+..++..      ...+.|+++..++.++.+.......+      ... .+......+...+..+.+
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (296)
T cd06655         168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRD  247 (296)
T ss_pred             ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHH
Confidence            32    12233334444422      23456667777777665543221111      011 111112223355678999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+||..+|.+|||+.+|+.
T Consensus       248 li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         248 FLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHhhcChhhCCCHHHHhh
Confidence            999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.2e-32  Score=237.46  Aligned_cols=232  Identities=18%  Similarity=0.174  Sum_probs=170.1

Q ss_pred             ceeecCCeEEEEEEe----CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           65 VIMKRSFYTLYKGFC----QERLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      .||+|+||.||+|.+    ++..+|+|.+..... .....+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            589999999999986    336799998876542 333578899999999999999999999999889999999999999


Q ss_pred             hhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc--
Q 045682          140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE--  217 (309)
Q Consensus       140 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--  217 (309)
                      |.+++.....  ......++..+..++.|++.||.|||   +.+++|+||||+||+++.++++||+|||++.......  
T Consensus        82 L~~~l~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~  156 (269)
T cd05087          82 LKGYLRSCRK--AELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY  156 (269)
T ss_pred             HHHHHHHhhh--cccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence            9999863221  12335677888899999999999999   9999999999999999999999999999987543322  


Q ss_pred             ----cccccccccccccc-------------cCCCcccHHHHHHHHhh-ccc-cccc-----ccccccC-CCCCC---ch
Q 045682          218 ----LLTGLRAFDLARLN-------------EDDGYVALRDHVKKYFE-EDR-LNEI-----IDPLIMG-DRSCS---GK  269 (309)
Q Consensus       218 ----~~~g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~-~~~-~~~~-----~~~~~~g-~~~~~---~~  269 (309)
                          ...+...+.+|+..             ...+.|+++..++.++. +.. +...     ......+ .....   ..
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (269)
T cd05087         157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLK  236 (269)
T ss_pred             ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccC
Confidence                11223334444432             23467777777777653 332 1111     0000011 11111   11


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ...+..+.+++..|| .+|++|||+.+|+..|+
T Consensus       237 ~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         237 LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            134567889999999 58999999999998774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=9.2e-33  Score=238.23  Aligned_cols=231  Identities=17%  Similarity=0.189  Sum_probs=169.2

Q ss_pred             ceeecCCeEEEEEEe-CC---eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           65 VIMKRSFYTLYKGFC-QE---RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      .||+|+||.||+|.. ++   ..+++|.+.... ....+.+.+|+.++..++||||+++++.+.+....++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            589999999999986 33   346677766543 3345679999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC---
Q 045682          140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG---  216 (309)
Q Consensus       140 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---  216 (309)
                      |.+++.....   .....++..+..++.||+.||+|||   +.+++|+||||+|||++.++.+||+|||++......   
T Consensus        82 L~~~l~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~  155 (268)
T cd05086          82 LKSYLSQEQW---HRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI  155 (268)
T ss_pred             HHHHHHhhhc---ccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence            9999863211   2345677788899999999999999   899999999999999999999999999998643211   


Q ss_pred             ---ccccccccccccccc-------------cCCCcccHHHHHHHHhhccc--c-----cccccccccCCC----CCCch
Q 045682          217 ---ELLTGLRAFDLARLN-------------EDDGYVALRDHVKKYFEEDR--L-----NEIIDPLIMGDR----SCSGK  269 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~g~~----~~~~~  269 (309)
                         ....+...+.+++..             ...+.|+++..+++++....  +     .+.+.....+..    .+..+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (268)
T cd05086         156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE  235 (268)
T ss_pred             hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence               122233444444432             23467778877777763221  1     112222122211    11112


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ...++.+.+++..|| .+|++|||+.+|++.|.
T Consensus       236 ~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         236 LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            245677889999999 57999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-34  Score=239.71  Aligned_cols=234  Identities=15%  Similarity=0.157  Sum_probs=175.1

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecC--CCchhHHHHHHHHHHHhhccCCcceeeeeeeee-----C
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDA--SKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE-----T  125 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-----~  125 (309)
                      .....|...+.||+|+||.|+.+..  +|..||||++..  ......++-.+|+++|+.++|+||+.+.+++..     -
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            3455677778899999999999999  889999999873  456677889999999999999999999998865     3


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      +..|+|+|+|+. +|.+.++       .+..++......++.|+++||.|+|   +.+|+||||||+|+|++.+..+||+
T Consensus        99 ~DvYiV~elMet-DL~~iik-------~~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~  167 (359)
T KOG0660|consen   99 NDVYLVFELMET-DLHQIIK-------SQQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKIC  167 (359)
T ss_pred             ceeEEehhHHhh-HHHHHHH-------cCccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEec
Confidence            478999999965 9999987       5666999999999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCC---Cccccccc---cccccccccCCC-------cccHHHHHHHHhhccccc------c----ccc-----
Q 045682          206 DFSFSISIPE---GELLTGLR---AFDLARLNEDDG-------YVALRDHVKKYFEEDRLN------E----IID-----  257 (309)
Q Consensus       206 Dfg~a~~~~~---~~~~~g~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~------~----~~~-----  257 (309)
                      |||+|+....   ....|+..   .+.+|+......       .|+.+....+++.+..+.      +    +++     
T Consensus       168 DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP  247 (359)
T KOG0660|consen  168 DFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP  247 (359)
T ss_pred             cccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC
Confidence            9999999864   34444433   334444433333       344444444443332210      0    000     


Q ss_pred             ------ccc----------cCCCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 ------PLI----------MGDRSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 ------~~~----------~g~~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                            .+.          ....+..+-    +...+...+|++++|..||.+|+|++|.++
T Consensus       248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                  000          001111100    133466889999999999999999999875

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=3.1e-33  Score=251.56  Aligned_cols=232  Identities=13%  Similarity=0.101  Sum_probs=175.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||+||+|..  +++.||+|.+....   ......+.+|+.++.+++||||+++++.+.+....++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            3688899999999999999998  68999999986532   233456788999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus        81 E~~~gg~L~~~l~-------~~~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~  150 (363)
T cd05628          81 EFLPGGDMMTLLM-------KKDTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTG  150 (363)
T ss_pred             cCCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccc
Confidence            9999999999986       4567999999999999999999999   99999999999999999999999999999875


Q ss_pred             cCCC---------------------------------------cccccccccccccccc------CCCcccHHHHHHHHh
Q 045682          213 IPEG---------------------------------------ELLTGLRAFDLARLNE------DDGYVALRDHVKKYF  247 (309)
Q Consensus       213 ~~~~---------------------------------------~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~  247 (309)
                      ....                                       ....|...|.+|+...      ..+.|+++..++.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell  230 (363)
T cd05628         151 LKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML  230 (363)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHH
Confidence            4321                                       0124555666665432      346677777777776


Q ss_pred             hcccc------cccccccccCC--CCCCchHHHHHHHHHHHHHcc--cCCCCCCCCHHHHHH
Q 045682          248 EEDRL------NEIIDPLIMGD--RSCSGKEQQLQAYAHLIFECV--NESPVDRPTMVDVAK  299 (309)
Q Consensus       248 ~~~~~------~~~~~~~~~g~--~~~~~~~~~~~~l~~li~~Cl--~~~P~~RPt~~~l~~  299 (309)
                      .+...      .+....+....  ...+.....++++.+++.+++  ..++..||++.+|++
T Consensus       231 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~  292 (363)
T cd05628         231 IGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKT  292 (363)
T ss_pred             hCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence            54432      12222222211  111111123566777777633  334456799999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.4e-33  Score=247.53  Aligned_cols=227  Identities=16%  Similarity=0.212  Sum_probs=173.4

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHH---hhccCCcceeeeeeeeeCCceEEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYA---SQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      |...+.||+|+||.||+|.+  +++.||+|.+....   ....+.+.+|+.++   ..++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            45678899999999999998  78999999987532   22345566776665   456899999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|..++.        ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++
T Consensus        81 ~E~~~~~~L~~~~~--------~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~  149 (324)
T cd05589          81 MEYAAGGDLMMHIH--------TDVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCK  149 (324)
T ss_pred             EcCCCCCcHHHHhh--------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCc
Confidence            99999999998874        357999999999999999999999   9999999999999999999999999999987


Q ss_pred             ccCCC----cccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHH
Q 045682          212 SIPEG----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       212 ~~~~~----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .....    ....|...+.+++...      ..+.|+++..++.++.+...      .++.+....+...  .+...+..
T Consensus       150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~--~p~~~~~~  227 (324)
T cd05589         150 EGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR--YPRFLSRE  227 (324)
T ss_pred             cCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCCCCHH
Confidence            54221    1234555565555322      34677788777777654432      2223333333222  12245678


Q ss_pred             HHHHHHHcccCCCCCCCC-----HHHHHH
Q 045682          276 YAHLIFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      +.+++.+||+.||.+||+     +.++++
T Consensus       228 ~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         228 AISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            899999999999999994     555543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=5.1e-33  Score=239.47  Aligned_cols=232  Identities=17%  Similarity=0.221  Sum_probs=178.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ++|...+.||+|+||.||+|..  +++.||+|.+..........+.+|+.++..++||||+++++++...+..++||||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            4566777899999999999998  78999999987665455567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++.       ..+.+++.++..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.....
T Consensus        89 ~~~~L~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06645          89 GGGSLQDIYH-------VTGPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITA  158 (267)
T ss_pred             CCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence            9999999986       4567999999999999999999999   89999999999999999999999999999865432


Q ss_pred             C----ccccccccccccccc---------cCCCcccHHHHHHHHhhcccccc------cccccccCCCCCC---chHHHH
Q 045682          216 G----ELLTGLRAFDLARLN---------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSCS---GKEQQL  273 (309)
Q Consensus       216 ~----~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~---~~~~~~  273 (309)
                      .    ....|...+.+|+..         ...+.|+++..++.++.+.....      .+.....+....+   .....+
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd06645         159 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWS  238 (267)
T ss_pred             cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCC
Confidence            2    223444445444432         12456667766666654432210      0000111111111   111345


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.+++.+||+.+|++|||+.+|++
T Consensus       239 ~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         239 NSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHhc
Confidence            67899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=4e-33  Score=256.40  Aligned_cols=233  Identities=15%  Similarity=0.200  Sum_probs=167.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeC--------
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLET--------  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--------  125 (309)
                      ...+|...+.||+|+||.||+|.+  +++.||||++....    ....+|+.+++.++||||+++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            346799999999999999999998  77999999886542    2245799999999999999999877532        


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEE
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKL  204 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl  204 (309)
                      ...++||||+++ +|.+++....   .....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++ .+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~---~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL  212 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYA---RNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKL  212 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceee
Confidence            136689999985 7877764221   13567999999999999999999999   99999999999999998664 7999


Q ss_pred             eecccccccCCCc---cccccccccccccccC-------CCcccHHHHHHHHhhcccccc------cccccc--cCC---
Q 045682          205 FDFSFSISIPEGE---LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNE------IIDPLI--MGD---  263 (309)
Q Consensus       205 ~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~g~---  263 (309)
                      +|||+|+......   ...|...|.+|+...+       .+.|+++..++.++.+.....      .+....  .|.   
T Consensus       213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~  292 (440)
T PTZ00036        213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE  292 (440)
T ss_pred             eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            9999998764432   2334455555554322       245555555665554432211      000000  000   


Q ss_pred             --------------CCCC--------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 --------------RSCS--------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 --------------~~~~--------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    .+..        .+...+.++.+|+.+||+.||.+|||+.++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence                          0000        01123467999999999999999999999973

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.6e-34  Score=243.66  Aligned_cols=230  Identities=20%  Similarity=0.209  Sum_probs=165.2

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-----ceEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-----IPILV  131 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~lv  131 (309)
                      .|...+++|.|+||.||+|..  ++..||||+.-.....    --+|+.+|+.++|||||++.-+|....     ...+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            466678999999999999999  7799999998665432    236899999999999999998886532     23579


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-CcEEEeecccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-NVAKLFDFSFS  210 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a  210 (309)
                      |||+|. +|.++++...   ..+..++.-.+.-+..||.+||+|||   +.+|+||||||+|+|+|.+ |.+||||||.|
T Consensus       101 leymP~-tL~~~~r~~~---~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA  173 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYT---RANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSA  173 (364)
T ss_pred             HHhchH-HHHHHHHHHh---hcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence            999997 9999986221   13566777788889999999999999   9999999999999999966 99999999999


Q ss_pred             cccCCCc---cccccccccccccccC-------CCcccHHHHHHHHhhcccc----------ccccc-------------
Q 045682          211 ISIPEGE---LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRL----------NEIID-------------  257 (309)
Q Consensus       211 ~~~~~~~---~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----------~~~~~-------------  257 (309)
                      +....++   ...-.+-|.+|+...+       -+.|+.+..+.+++.+..+          .++++             
T Consensus       174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m  253 (364)
T KOG0658|consen  174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM  253 (364)
T ss_pred             eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence            9886654   1112222333333222       2456666666655433221          01110             


Q ss_pred             ---------ccccCCCC-CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 ---------PLIMGDRS-CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 ---------~~~~g~~~-~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                               +......- -......+++..+|+.++++++|.+|.++.|++.
T Consensus       254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                     11110000 0011244578999999999999999999999874

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.1e-32  Score=237.60  Aligned_cols=231  Identities=17%  Similarity=0.225  Sum_probs=167.2

Q ss_pred             ceeecCCeEEEEEEe-C---CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           65 VIMKRSFYTLYKGFC-Q---ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      .||+|+||.||+|.. +   ...+++|.+.... ......+.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            589999999999976 2   3578888876543 2334568899999999999999999999999999999999999999


Q ss_pred             hhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc--
Q 045682          140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE--  217 (309)
Q Consensus       140 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--  217 (309)
                      |.+++.....  ......++.....++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++.......  
T Consensus        82 L~~~l~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~  156 (269)
T cd05042          82 LKNYLRSNRG--MVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY  156 (269)
T ss_pred             HHHHHHhccc--cccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence            9999863321  11233567888999999999999999   9999999999999999999999999999987543221  


Q ss_pred             ----ccccccccccccc-------------ccCCCcccHHHHHHHHhh-ccc-ccc-----ccccccc-CCCCC---Cch
Q 045682          218 ----LLTGLRAFDLARL-------------NEDDGYVALRDHVKKYFE-EDR-LNE-----IIDPLIM-GDRSC---SGK  269 (309)
Q Consensus       218 ----~~~g~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-~~~-~~~-----~~~~~~~-g~~~~---~~~  269 (309)
                          ...+...|.+|+.             ....+.|+++..+++++. +.. +..     .+..... +....   ..+
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (269)
T cd05042         157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLD  236 (269)
T ss_pred             eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCccc
Confidence                1111222333332             123456666666666654 221 111     1111111 11111   112


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      ...+..+..++..|| .||++|||+.+|++.|
T Consensus       237 ~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         237 LKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             ccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            355677889999999 5999999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=9.5e-34  Score=250.42  Aligned_cols=221  Identities=17%  Similarity=0.156  Sum_probs=166.9

Q ss_pred             CceeecCCeEEEEEEe-----CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           64 KVIMKRSFYTLYKGFC-----QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      +.||+|+||.||++..     +++.||+|.+....  ......+.+|+.++.+++||||+++++++.+++..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999875     56899999987542  2233557789999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++.       ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus        82 ~~~L~~~l~-------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  151 (318)
T cd05582          82 GGDLFTRLS-------KEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  151 (318)
T ss_pred             CCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC
Confidence            999999986       4567899999999999999999999   999999999999999999999999999998765433


Q ss_pred             c----ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHH
Q 045682          217 E----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       217 ~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li  280 (309)
                      .    ...|...+.+++...      ..+.|+++..++.++.+...      .+.+..+..+...  .+...+..+.+|+
T Consensus       152 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li  229 (318)
T cd05582         152 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG--MPQFLSPEAQSLL  229 (318)
T ss_pred             CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHH
Confidence            1    233455555554322      23445555444444433221      1112222222211  1223457789999


Q ss_pred             HHcccCCCCCCCCHHH
Q 045682          281 FECVNESPVDRPTMVD  296 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~  296 (309)
                      ..||+.||++|||+.+
T Consensus       230 ~~~l~~~P~~R~~a~~  245 (318)
T cd05582         230 RALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHhhcCHhHcCCCCC
Confidence            9999999999999655

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4e-33  Score=247.05  Aligned_cols=224  Identities=17%  Similarity=0.221  Sum_probs=174.0

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccC-CcceeeeeeeeeCCceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIH-RCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~  132 (309)
                      +|+..+.||+|+||.||+|..  +++.||+|.+...   .......+..|..++..+.| ++|+++++++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            477788999999999999998  6689999998653   22345668889999999965 56888999999989999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        81 E~~~~g~L~~~~~-------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05587          81 EYVNGGDLMYHIQ-------QVGKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKE  150 (324)
T ss_pred             cCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCccee
Confidence            9999999999986       4567899999999999999999999   99999999999999999999999999999875


Q ss_pred             cCC----Ccccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHH
Q 045682          213 IPE----GELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~----~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ...    .....|...|.+|+...      ..+.|+++..++.++.+....      +.+.....+...  .+...+.++
T Consensus       151 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~  228 (324)
T cd05587         151 NIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS--YPKSLSKEA  228 (324)
T ss_pred             cCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHH
Confidence            321    11234555665555322      346778888888776654332      122222222221  122456788


Q ss_pred             HHHHHHcccCCCCCCCCH
Q 045682          277 AHLIFECVNESPVDRPTM  294 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~  294 (309)
                      .+++.+||+.||.+||+.
T Consensus       229 ~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         229 VSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHHHhhcCHHHcCCC
Confidence            999999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-33  Score=246.74  Aligned_cols=232  Identities=20%  Similarity=0.223  Sum_probs=192.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .+-|+..+.||+|-|..|-.|++  +|..||||++.+.+  ......+..|+..|+.++|||||+||.+.......|||.
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            35588889999999999999998  99999999998764  334456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee-cCCCcEEEeeccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF-NEENVAKLFDFSFSI  211 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill-~~~~~~kl~Dfg~a~  211 (309)
                      |+=++|+|.+|+-.|      ...+.+..+.+++.||+.|+.|||   ...+|||||||+|+.+ ..-|.|||+|||++.
T Consensus        97 ELGD~GDl~DyImKH------e~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSN  167 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKH------EEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSN  167 (864)
T ss_pred             EecCCchHHHHHHhh------hccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccc
Confidence            999999999999644      467999999999999999999999   9999999999999876 567899999999999


Q ss_pred             ccCCCc---cccccccccccccccCCCcccHHHHHHHH-------hhcc------cccccccccccCCCCCCchHHHHHH
Q 045682          212 SIPEGE---LLTGLRAFDLARLNEDDGYVALRDHVKKY-------FEED------RLNEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .+.+++   ..+|.-+|.+|+...+..+...+.++|.+       ..+.      +..+.+..++...+.  .|...+.+
T Consensus       168 kf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt--vPshvS~e  245 (864)
T KOG4717|consen  168 KFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT--VPSHVSKE  245 (864)
T ss_pred             cCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc--CchhhhHH
Confidence            887765   56788999999887777666666666654       2222      222333333333333  34577899


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+||..||..||.+|.|..+|+.
T Consensus       246 CrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  246 CRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             HHHHHHHHHhcCchhhccHHHHhc
Confidence            999999999999999999999974

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-32  Score=233.85  Aligned_cols=229  Identities=22%  Similarity=0.318  Sum_probs=175.4

Q ss_pred             CceeecCCeEEEEEEe-CCeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCChh
Q 045682           64 KVIMKRSFYTLYKGFC-QERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA  141 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~  141 (309)
                      ++||+|+||.||++.+ .++.|++|.+...... ....+.+|+.++++++||||+++++++.+....++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            3689999999999998 6899999998765433 4567999999999999999999999999999999999999999999


Q ss_pred             hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCccccc
Q 045682          142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG  221 (309)
Q Consensus       142 ~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~g  221 (309)
                      +++..      ....+++..+..++.+++.||.|||   +.+++|+||+|+||+++.++.+||+|||++...........
T Consensus        81 ~~l~~------~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  151 (251)
T cd05041          81 TFLRK------KKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS  151 (251)
T ss_pred             HHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec
Confidence            99851      2346889999999999999999999   99999999999999999999999999999876542221111


Q ss_pred             ------ccccccccc------ccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHHHHHHH
Q 045682          222 ------LRAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       222 ------~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~~  282 (309)
                            ...+.+++.      ....+.|+++..++.++. +...      .........+ .....+...+.++.+++.+
T Consensus       152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~  230 (251)
T cd05041         152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-YRMPAPQLCPEEIYRLMLQ  230 (251)
T ss_pred             cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-CCCCCCccCCHHHHHHHHH
Confidence                  111233332      123466677766666664 2211      1111111111 1112233566889999999


Q ss_pred             cccCCCCCCCCHHHHHHHHH
Q 045682          283 CVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       283 Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ||+.+|.+|||+.+|++.|+
T Consensus       231 ~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         231 CWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HhccChhhCcCHHHHHHHhh
Confidence            99999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1e-32  Score=237.35  Aligned_cols=231  Identities=18%  Similarity=0.289  Sum_probs=176.2

Q ss_pred             CCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCC------chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASK------PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      +|...+.||+|+||.||+|.. +++.+|+|.+....      ......+.+|+.++++++|+||+++++++.+.+..+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            467788999999999999988 88899999886432      12335688999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      +||+++++|.+++.       ....+++..+..++.|++.||+|||   +.+++|+||+|+||++++++.++|+|||++.
T Consensus        81 ~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  150 (265)
T cd06631          81 MEFVPGGSISSILN-------RFGPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCAR  150 (265)
T ss_pred             EecCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhH
Confidence            99999999999986       4457899999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCC----------ccccccccccccccc------cCCCcccHHHHHHHHhhccccccccc------ccccC-CCCCCc
Q 045682          212 SIPEG----------ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEIID------PLIMG-DRSCSG  268 (309)
Q Consensus       212 ~~~~~----------~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g-~~~~~~  268 (309)
                      .....          ....|...+.+++..      ...+.|+++..++.++.+.......+      ..... ...+..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  230 (265)
T cd06631         151 RLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRL  230 (265)
T ss_pred             hhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCC
Confidence            54221          112233344444432      22456666666666655443221111      01111 111112


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +...+.++.+++++||+.+|.+||++.+++.
T Consensus       231 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         231 PDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            2356688999999999999999999999874

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.9e-32  Score=236.58  Aligned_cols=241  Identities=19%  Similarity=0.290  Sum_probs=175.3

Q ss_pred             CCccCceeecCCeEEEEEEe-----CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------
Q 045682           60 YDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------  126 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  126 (309)
                      |...+.||+|+||.||+|.+     ++..||+|.+...  .....+++.+|+.+++.++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            45577899999999999986     3588999998664  2344567899999999999999999999886532      


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++++||+++|+|.+++..... ......+++..+..++.|++.||+|||   +.+++|+||||+||+++.++.+||+|
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~d  156 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRI-GEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVAD  156 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECc
Confidence            34788999999999998742211 112335889999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCccc------ccccccccccc------ccCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCC
Q 045682          207 FSFSISIPEGELL------TGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCS  267 (309)
Q Consensus       207 fg~a~~~~~~~~~------~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~  267 (309)
                      ||+++........      .+...+..++.      ....+.|+++..+++++. +....      +.......+... .
T Consensus       157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~  235 (273)
T cd05074         157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL-K  235 (273)
T ss_pred             ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcC-C
Confidence            9999876433211      11111222221      123466677777776654 22211      111111222211 1


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      .+...+..+.+++.+||+.+|++|||+.++++.|++++
T Consensus       236 ~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~  273 (273)
T cd05074         236 QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW  273 (273)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence            11245578999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1e-32  Score=242.20  Aligned_cols=238  Identities=19%  Similarity=0.274  Sum_probs=175.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe----EEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER----LISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++|...+.||+|+||.||+|.+  ++.    .||+|.+.... ......+.+|+.++..++||||++++|++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            4577788999999999999987  443    57888886643 23344688999999999999999999998764 4678


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ++||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++
T Consensus        86 v~e~~~~g~l~~~~~~------~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~  156 (303)
T cd05110          86 VTQLMPHGCLLDYVHE------HKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA  156 (303)
T ss_pred             eehhcCCCCHHHHHHh------cccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEcccccc
Confidence            9999999999999852      2346899999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCcc---c---ccccccccccccc------CCCcccHHHHHHHHhh-c-ccc-----cccccccccCCCCCCchHH
Q 045682          211 ISIPEGEL---L---TGLRAFDLARLNE------DDGYVALRDHVKKYFE-E-DRL-----NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~~---~---~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~-~~~-----~~~~~~~~~g~~~~~~~~~  271 (309)
                      +.......   .   .+...+..++...      ..+.|+++..+++++. + ..+     .+..+....+... ..+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~  235 (303)
T cd05110         157 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL-PQPPI  235 (303)
T ss_pred             ccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC-CCCCC
Confidence            86543221   1   1111233333221      2345666666666543 2 111     1111222222222 22224


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ++..+.+++..||..+|++||++.++++.|..+..
T Consensus       236 ~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~  270 (303)
T cd05110         236 CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR  270 (303)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            56779999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.1e-32  Score=240.29  Aligned_cols=232  Identities=15%  Similarity=0.198  Sum_probs=169.8

Q ss_pred             CCCccCceeecCCeEEEEEEe---CCeEEEEEEecCCC--chhHHHHHHHHHHHhhc---cCCcceeeeeeee-----eC
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC---QERLISVMKFDASK--PRMYDCCINNIVYASQM---IHRCFFKLIGCCL-----ET  125 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~-----~~  125 (309)
                      +|...+.||+|+||.||+|.+   .+..||+|.+....  ......+.+|+.++..+   +||||+++++++.     ..
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            588889999999999999987   36789999886542  22334566787777766   6999999999985     24


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ...++||||++ ++|.+++...     ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~  152 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKV-----PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA  152 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEc
Confidence            56899999997 5999998622     3456899999999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCCc---ccccccccccccc------ccCCCcccHHHHHHHHhhcccccc------cccccccC--------
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNE------IIDPLIMG--------  262 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g--------  262 (309)
                      |||++.......   ...|...|.+|+.      ....+.|+++..+++++.+.....      .+..+...        
T Consensus       153 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~  232 (290)
T cd07862         153 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED  232 (290)
T ss_pred             cccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence            999997654332   2234444544443      223477888888887765443211      00000000        


Q ss_pred             -------------CCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 -------------DRSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 -------------~~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                   ..+....    ...+..+.+|+.+||+.||++|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence                         0000000    123466789999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1e-32  Score=239.54  Aligned_cols=226  Identities=15%  Similarity=0.196  Sum_probs=172.4

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ||+|+||+||++.+  +++.||+|.+....   ......+..|+.+++.++||||+++.+++..+...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            69999999999998  78999999986532   22335678899999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc---
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE---  217 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---  217 (309)
                      .+++....   .....+++..+..++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||++.......   
T Consensus        81 ~~~~~~~~---~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  154 (280)
T cd05608          81 RYHIYNVD---EENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT  154 (280)
T ss_pred             HHHHHhcc---ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccc
Confidence            98874211   13456899999999999999999999   9999999999999999999999999999997654332   


Q ss_pred             -ccccccccccccccc------CCCcccHHHHHHHHhhcccccc----------cccccccCCCCCCchHHHHHHHHHHH
Q 045682          218 -LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE----------IIDPLIMGDRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       218 -~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~l~~li  280 (309)
                       ...|...+.+++...      ..+.|+++..++.++.+.....          +......+.  ...+...+..+.+++
T Consensus       155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li  232 (280)
T cd05608         155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS--VTYPDKFSPASKSFC  232 (280)
T ss_pred             cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC--CCCcccCCHHHHHHH
Confidence             223455555555422      3466777777777765432211          111111111  112234667899999


Q ss_pred             HHcccCCCCCCC-----CHHHHHH
Q 045682          281 FECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       281 ~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      ..||+.||++||     |+.++++
T Consensus       233 ~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         233 EALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHhcCCHHHhcCCCCCCHHHHhc
Confidence            999999999999     6677764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=7.1e-33  Score=240.87  Aligned_cols=234  Identities=15%  Similarity=0.194  Sum_probs=180.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|+..+.||+|+||+||++.+  ++..||+|.+.... ....+.+.+|++++..++||||+++++++...+..++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            4567778899999999999998  58899999876543 34457899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++.       ..+.+++..+..++.+++.||.|||+  ..+++|+||+|+||+++.++.++|+|||++....
T Consensus        85 ~~~~~L~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~  155 (284)
T cd06620          85 MDCGSLDRIYK-------KGGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI  155 (284)
T ss_pred             CCCCCHHHHHH-------hccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence            99999999986       34578999999999999999999993  3589999999999999999999999999986543


Q ss_pred             CC--cccccccccccccccc------CCCcccHHHHHHHHhhcccccc-----------------cccccccCCCCCCch
Q 045682          215 EG--ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE-----------------IIDPLIMGDRSCSGK  269 (309)
Q Consensus       215 ~~--~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~g~~~~~~~  269 (309)
                      ..  ....|..++.+++...      ..+.|+++..++.++.+.....                 .+........+....
T Consensus       156 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd06620         156 NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS  235 (284)
T ss_pred             hhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCc
Confidence            22  1234455554454321      2356666666666654332211                 112222222222222


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ...+.++.+|+.+||+.||++|||+.++++.
T Consensus       236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             hhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            2366789999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.5e-32  Score=234.97  Aligned_cols=233  Identities=21%  Similarity=0.312  Sum_probs=176.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      .+|+..+.||+|+||.||+|.+ ++..+|+|.+.... .....+.+|+.++++++|||++++++++......++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            3577788999999999999998 68889999886543 234578999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +++|.+++..      ....+++..+..++.|++.|++|||   +.+++|+||+|+||+++.++.+||+|||++......
T Consensus        83 ~~~L~~~~~~------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~  153 (256)
T cd05112          83 HGCLSDYLRA------QRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD  153 (256)
T ss_pred             CCcHHHHHHh------CccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccC
Confidence            9999999851      2346899999999999999999999   899999999999999999999999999998765433


Q ss_pred             cccc-----cccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHHH
Q 045682          217 ELLT-----GLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       217 ~~~~-----g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ...+     +...+.+++...      ..+.|+++..++.++. +...      .+..+....+..... +...+..+.+
T Consensus       154 ~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  232 (256)
T cd05112         154 QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK-PRLASQSVYE  232 (256)
T ss_pred             cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC-CCCCCHHHHH
Confidence            2111     111233333221      2355666666666553 2211      122222222222211 2234678999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      |+.+||+.+|++|||+.++++.|
T Consensus       233 l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         233 LMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHcccChhhCCCHHHHHHhh
Confidence            99999999999999999999886

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.2e-32  Score=235.36  Aligned_cols=232  Identities=23%  Similarity=0.340  Sum_probs=177.0

Q ss_pred             CccCceeecCCeEEEEEEeC--C----eEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           61 DSEKVIMKRSFYTLYKGFCQ--E----RLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~~--~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +..+.||.|+||.||++.+.  +    ..||+|.+...... ..+.+..|+.++..++|+||+++++++.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            45678999999999999993  3    88999999765433 56789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++...     ....+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++...
T Consensus        82 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~  153 (258)
T smart00219       82 YMEGGDLLDYLRKN-----RPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDL  153 (258)
T ss_pred             ccCCCCHHHHHHhh-----hhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceec
Confidence            99999999998621     1112899999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCcccc-----cccccccccc------ccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHH
Q 045682          214 PEGELLT-----GLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       214 ~~~~~~~-----g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .......     +...+..|+.      ....+.|+++..++.++. +...      ..+......+..... +...+.+
T Consensus       154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  232 (258)
T smart00219      154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK-PENCPPE  232 (258)
T ss_pred             ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC-CCcCCHH
Confidence            5442211     1122333332      223455666666666553 2211      122222223332222 2346788


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      +.+++.+||+.+|++|||+.++++.|
T Consensus       233 ~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      233 IYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            99999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=5.2e-33  Score=246.23  Aligned_cols=220  Identities=18%  Similarity=0.190  Sum_probs=168.9

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHH-HHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIV-YASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||+||+|.+  +++.||+|.+....   ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            3699999999999999  78999999986532   222344555554 56778999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|..++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++...... 
T Consensus        81 g~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~  150 (323)
T cd05575          81 GELFFHLQ-------RERSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS  150 (323)
T ss_pred             CCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC
Confidence            99999986       4567899999999999999999999   999999999999999999999999999998754221 


Q ss_pred             ---ccccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+|+..      ...+.|+++..++.++.+...      .+..+....+....  +...+..+.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~li~  228 (323)
T cd05575         151 KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL--KPNISVSARHLLE  228 (323)
T ss_pred             CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHHHHH
Confidence               123455555555532      234677777777777654322      22333333332221  1234678999999


Q ss_pred             HcccCCCCCCCCHH
Q 045682          282 ECVNESPVDRPTMV  295 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~  295 (309)
                      +||+.||.+||++.
T Consensus       229 ~~l~~~p~~R~~~~  242 (323)
T cd05575         229 GLLQKDRTKRLGAK  242 (323)
T ss_pred             HHhhcCHHhCCCCC
Confidence            99999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=6.1e-33  Score=250.11  Aligned_cols=239  Identities=13%  Similarity=0.162  Sum_probs=184.5

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET  125 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  125 (309)
                      .++....++|+..+.||+|+||.||++.+  +++.+|+|.+...   .......+.+|+.++..++||||+++++++.++
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  115 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            34445568899999999999999999999  7789999998642   223345678999999999999999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      +..++||||+++|+|.+++.        ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus       116 ~~~~lv~Ey~~gg~L~~~~~--------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~  184 (371)
T cd05622         116 RYLYMVMEYMPGGDLVNLMS--------NYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLA  184 (371)
T ss_pred             CEEEEEEcCCCCCcHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEE
Confidence            99999999999999999985        235888899999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCCc-----ccccccccccccc----------ccCCCcccHHHHHHHHhhccccc------ccccccccCC-
Q 045682          206 DFSFSISIPEGE-----LLTGLRAFDLARL----------NEDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGD-  263 (309)
Q Consensus       206 Dfg~a~~~~~~~-----~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~-  263 (309)
                      |||++.......     ...|...+.+|+.          ....+.|+++..++.++.+....      .....+.... 
T Consensus       185 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~  264 (371)
T cd05622         185 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN  264 (371)
T ss_pred             eCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            999998764322     2345666666653          23457888888888887654321      1222222221 


Q ss_pred             -CCCCchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 045682          264 -RSCSGKEQQLQAYAHLIFECVNESPVD--RPTMVDVAKK  300 (309)
Q Consensus       264 -~~~~~~~~~~~~l~~li~~Cl~~~P~~--RPt~~~l~~~  300 (309)
                       .+.+.....+.++.+++..|++.+|.+  ||++.+|++.
T Consensus       265 ~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         265 SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence             222222356788999999999844433  7788888753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=6.6e-33  Score=245.56  Aligned_cols=224  Identities=17%  Similarity=0.223  Sum_probs=175.8

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      +|...+.||+|+||.||+|..  ++..||+|.+....   ......+..|..++..+ +|++|+++++++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            477788999999999999998  67899999987542   22334567788888877 6899999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus        81 E~~~~g~L~~~~~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~  150 (323)
T cd05616          81 EYVNGGDLMYQIQ-------QVGRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  150 (323)
T ss_pred             cCCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCcee
Confidence            9999999999986       4567899999999999999999999   99999999999999999999999999999875


Q ss_pred             cCCC----ccccccccccccccc------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEG----ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~----~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....    ....|...|.+|+..      ...+.|+++..++.++.+....      ++...+..+....  +...+.++
T Consensus       151 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~--p~~~s~~~  228 (323)
T cd05616         151 NMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY--PKSMSKEA  228 (323)
T ss_pred             cCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CCcCCHHH
Confidence            4321    133456566665532      2347788888888876554322      2223333333221  23456789


Q ss_pred             HHHHHHcccCCCCCCCCH
Q 045682          277 AHLIFECVNESPVDRPTM  294 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~  294 (309)
                      .+++.+||+.+|.+|++.
T Consensus       229 ~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         229 VAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHHHcccCHHhcCCC
Confidence            999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=5.2e-33  Score=245.70  Aligned_cols=224  Identities=19%  Similarity=0.251  Sum_probs=172.2

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  ++..||+|.+...   .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999998  6789999998753   223445677899999888 799999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|.+++.       ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++..... 
T Consensus        81 ~~L~~~~~-------~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  150 (318)
T cd05570          81 GDLMFHIQ-------RSGRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG  150 (318)
T ss_pred             CCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC
Confidence            99999986       4557999999999999999999999   999999999999999999999999999998653221 


Q ss_pred             ---cccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+|+...      ..+.|+++..++.++.+....      ++......+...  .+...+.++.+|+.
T Consensus       151 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~  228 (318)
T cd05570         151 VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR--YPRWLSKEAKSILK  228 (318)
T ss_pred             CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC--CCCcCCHHHHHHHH
Confidence               1223555555554322      346677777777665543321      112222222211  12245678999999


Q ss_pred             HcccCCCCCCCCH-----HHHHH
Q 045682          282 ECVNESPVDRPTM-----VDVAK  299 (309)
Q Consensus       282 ~Cl~~~P~~RPt~-----~~l~~  299 (309)
                      +||+.||.+|||+     .++++
T Consensus       229 ~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         229 SFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHccCCHHHcCCCCCCCHHHHhc
Confidence            9999999999999     77653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.4e-32  Score=236.98  Aligned_cols=239  Identities=13%  Similarity=0.210  Sum_probs=178.5

Q ss_pred             CCCccCceeecCCeEEEEEEe-C--CeEEEEEEecCCC----------chhHHHHHHHHHHHhh-ccCCcceeeeeeeee
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-Q--ERLISVMKFDASK----------PRMYDCCINNIVYASQ-MIHRCFFKLIGCCLE  124 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-~--~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~niv~l~g~~~~  124 (309)
                      +|+..+.||+|+||.||+|.+ .  +..+|+|.+....          ......+..|+.++.+ ++||||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            477788999999999999998 3  5889999875421          2233557788888875 699999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                      ++..+++|||+++++|.+++....   .....+++..++.++.|++.||.|||+  ..+++|+||+|+||+++.++.+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l  155 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLK---EKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTI  155 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEE
Confidence            999999999999999999874221   134568999999999999999999993  268999999999999999999999


Q ss_pred             eecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------cccccccCCCCCCch
Q 045682          205 FDFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSCSGK  269 (309)
Q Consensus       205 ~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~  269 (309)
                      +|||++.......   ...|...+..++...      ..+.|+++..+|.++.+.....      .......+...+...
T Consensus       156 ~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  235 (269)
T cd08528         156 TDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPE  235 (269)
T ss_pred             ecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCc
Confidence            9999998765442   233444444444322      2355666666666665433211      111222222222222


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      ...+..+.+++.+||+.||++||++.++.++++
T Consensus       236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         236 GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            245678999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-32  Score=237.25  Aligned_cols=269  Identities=18%  Similarity=0.218  Sum_probs=200.0

Q ss_pred             hhhChhHHHHHHHhhCCC--CCCcccccHHHHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHH
Q 045682           24 IRNGESVLKELIRASNGK--YNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCI  101 (309)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~  101 (309)
                      ...+++.++++.......  .++.+-+   --.....+....+.||+|.||.||+|.|.|..||||++....   .+.+.
T Consensus       178 ~~~~~stl~Dll~~~~tSGSGSGlplL---VQRTiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd---E~SWf  251 (513)
T KOG2052|consen  178 TLAGDSTLKDLLDDLETSGSGSGLPLL---VQRTIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD---ERSWF  251 (513)
T ss_pred             cccCCccHHHHHHhhccCCCCCCchhH---hHHhhhheeEEEEEecCccccceeeccccCCceEEEEecccc---hhhhh
Confidence            356777888876443332  2222222   223344667788899999999999999999999999997754   35688


Q ss_pred             HHHHHHhhc--cCCcceeeeeeeeeCC----ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 045682          102 NNIVYASQM--IHRCFFKLIGCCLETQ----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY  175 (309)
Q Consensus       102 ~e~~~l~~l--~h~niv~l~g~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~y  175 (309)
                      +|.++.+..  +|+||+.+++.=..+.    ..|||++|.+.|||.|||.        ...++....++++..+|.||++
T Consensus       252 rEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~--------r~tv~~~~ml~LalS~AsGLaH  323 (513)
T KOG2052|consen  252 RETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLN--------RNTVTTEGMLKLALSIASGLAH  323 (513)
T ss_pred             hHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHh--------hccCCHHHHHHHHHHHhhhHHH
Confidence            899988875  9999999998765433    6899999999999999995        5789999999999999999999


Q ss_pred             hhc-----CCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc--------cccccccccccccccCC--------
Q 045682          176 LHV-----GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE--------LLTGLRAFDLARLNEDD--------  234 (309)
Q Consensus       176 LH~-----~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--------~~~g~~~~~~~~~~~~~--------  234 (309)
                      ||.     +....|.|||||..||||..++++.|+|+|||.......        .-.|.+.|.+|+....+        
T Consensus       324 LH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fes  403 (513)
T KOG2052|consen  324 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFES  403 (513)
T ss_pred             HHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhh
Confidence            994     446789999999999999999999999999998765542        45577777777654322        


Q ss_pred             ----CcccHHHHHHHHhhccc---------------------ccccccccccCCCCCCc-----hHHHHHHHHHHHHHcc
Q 045682          235 ----GYVALRDHVKKYFEEDR---------------------LNEIIDPLIMGDRSCSG-----KEQQLQAYAHLIFECV  284 (309)
Q Consensus       235 ----~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~g~~~~~~-----~~~~~~~l~~li~~Cl  284 (309)
                          +.++++-.+|+......                     +.+..+.+......+..     .......+.+||+.||
T Consensus       404 yk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW  483 (513)
T KOG2052|consen  404 YKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECW  483 (513)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhh
Confidence                34555566677633221                     11222222111111111     1255677999999999


Q ss_pred             cCCCCCCCCHHHHHHHHHHHHH
Q 045682          285 NESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       285 ~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ..||..|-|+-.|-+.|.++.+
T Consensus       484 ~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  484 YANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             cCCchhhhHHHHHHHHHHHHhc
Confidence            9999999999999999888764

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.9e-32  Score=237.74  Aligned_cols=235  Identities=15%  Similarity=0.175  Sum_probs=176.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHH-HhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVY-ASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+..+.||+|+||.||+|.+  ++..||+|++.... ......+..|+.+ ++.++||||+++++++..++..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            3678888999999999999999  78999999987643 2233456666665 555699999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |++ |+|.+++.....   ....+++..++.++.|++.||.|||   +. +++|+||||+||+++.++.+||+|||++..
T Consensus        81 ~~~-~~l~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~  153 (283)
T cd06617          81 VMD-TSLDKFYKKVYD---KGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGY  153 (283)
T ss_pred             hhc-ccHHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence            997 588888753211   2357899999999999999999999   76 999999999999999999999999999876


Q ss_pred             cCCCc---cccccccccccccc----------cCCCcccHHHHHHHHhhcccccc-------cccccccCCCCCCchHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLN----------EDDGYVALRDHVKKYFEEDRLNE-------IIDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~~  272 (309)
                      .....   ...|..++.+++..          ...+.|+++..++.++.+.....       .+.....+..+..+....
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T cd06617         154 LVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKF  233 (283)
T ss_pred             cccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCcccc
Confidence            54322   12344445444432          23467788888888776543211       111222222222222345


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+++..||+.+|.+|||+.+|++
T Consensus       234 ~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         234 SPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            688999999999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.4e-32  Score=238.78  Aligned_cols=233  Identities=15%  Similarity=0.171  Sum_probs=170.7

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||+|++|.||+|..  ++..||+|.+....  ......+.+|+.++.+++||||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            477788999999999999998  68999999986542  23346788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      ++ ++|.+++...    .....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++....
T Consensus        81 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861          81 LS-MDLKKYLDSL----PKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFG  152 (285)
T ss_pred             CC-CCHHHHHhcC----CCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence            98 5898887521    12357899999999999999999999   9999999999999999999999999999987543


Q ss_pred             CCc----ccccccccccccccc-------CCCcccHHHHHHHHhhccccccccc------ccc--cCCC-----------
Q 045682          215 EGE----LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIID------PLI--MGDR-----------  264 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~g~~-----------  264 (309)
                      ...    ...+...+.+|+...       ..+.|+++..++.++.+.....--.      ...  .+..           
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
T cd07861         153 IPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL  232 (285)
T ss_pred             CCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence            221    111223334444221       2345556666666655432211000      000  0000           


Q ss_pred             -------CC-------CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 -------SC-------SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 -------~~-------~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                             +.       ......+.++.+++.+||+.||.+|||+.+|+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                   00       000123567889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=8.5e-33  Score=236.76  Aligned_cols=230  Identities=23%  Similarity=0.320  Sum_probs=172.1

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHH--HHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYD--CCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      |+..+.||+|+||+||++..  +++.+|+|.+.........  ...+|+.++.+++||||+++++++......++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            45577899999999999999  6688999999887533322  3456999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC-
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP-  214 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~-  214 (309)
                      ++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.... 
T Consensus        81 ~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~  150 (260)
T PF00069_consen   81 PGGSLQDYLQ-------KNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE  150 (260)
T ss_dssp             TTEBHHHHHH-------HHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS
T ss_pred             cccccccccc-------ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            9999999986       4677899999999999999999999   8999999999999999999999999999987531 


Q ss_pred             ---CCcccccccccccccccc-------CCCcccHHHHHHHHhhcccccccc---------cccccCCC--CCCchHHHH
Q 045682          215 ---EGELLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEII---------DPLIMGDR--SCSGKEQQL  273 (309)
Q Consensus       215 ---~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~--~~~~~~~~~  273 (309)
                         ......+...+.+|+...       ..+.|+++..++.++.+.....-.         ........  .........
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (260)
T PF00069_consen  151 NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKS  230 (260)
T ss_dssp             TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhH
Confidence               112233444455454432       223455555555555433211110         00000000  000000113


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .++.+++..||+.||++|||+.++++
T Consensus       231 ~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  231 EELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            78999999999999999999999974

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=9.6e-33  Score=243.74  Aligned_cols=223  Identities=17%  Similarity=0.227  Sum_probs=171.1

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  +++.||+|.+....   ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            3699999999999998  67899999987642   23345567788888765 999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|.+++.       ....+++..+..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++...... 
T Consensus        81 g~L~~~l~-------~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05619          81 GDLMFHIQ-------SCHKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD  150 (316)
T ss_pred             CcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC
Confidence            99999986       4467899999999999999999999   999999999999999999999999999998753221 


Q ss_pred             ---cccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+|+...      ..+.|+++..++.++.+....      ++......+...  .+...+.++.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~  228 (316)
T cd05619         151 AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPC--YPRWLTREAKDILV  228 (316)
T ss_pred             CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCccCCHHHHHHHH
Confidence               1234555555555422      346677777777776544321      222222222211  12245577899999


Q ss_pred             HcccCCCCCCCCHH-HHH
Q 045682          282 ECVNESPVDRPTMV-DVA  298 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~-~l~  298 (309)
                      .||+.||.+||++. ++.
T Consensus       229 ~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         229 KLFVREPERRLGVKGDIR  246 (316)
T ss_pred             HHhccCHhhcCCChHHHH
Confidence            99999999999997 553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=6.7e-33  Score=244.77  Aligned_cols=223  Identities=15%  Similarity=0.207  Sum_probs=170.9

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4699999999999999  78899999987532   23345567788888765 999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC--
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE--  215 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~--  215 (309)
                      |+|.+++.       ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++....  
T Consensus        81 g~L~~~i~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05620          81 GDLMFHIQ-------DKGRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD  150 (316)
T ss_pred             CcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC
Confidence            99999986       4567899999999999999999999   99999999999999999999999999999875321  


Q ss_pred             --Ccccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          216 --GELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       216 --~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                        .....|...|.+|+...      ..+.|+++..++.++.+....      ++......+..  ..+...+.++.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~  228 (316)
T cd05620         151 NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP--HYPRWITKESKDILE  228 (316)
T ss_pred             CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHH
Confidence              12334555555555322      346777777777776544321      11222221211  111234577899999


Q ss_pred             HcccCCCCCCCCHH-HHH
Q 045682          282 ECVNESPVDRPTMV-DVA  298 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~-~l~  298 (309)
                      .||+.||++||++. ++.
T Consensus       229 ~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         229 KLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHccCCHHHcCCChHHHH
Confidence            99999999999985 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.9e-32  Score=238.98  Aligned_cols=245  Identities=18%  Similarity=0.154  Sum_probs=186.2

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      +.+.++..++++|+..+.||+|+||.||++..  +++.+|+|.+.... .....+.+|+.++..+ +|||++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            45566777889999999999999999999998  67899999986543 2345678899999999 89999999999875


Q ss_pred             C-----CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          125 T-----QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       125 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                      .     +..++||||+++++|.+++....   .....+++..++.++.|++.||.|||   +.+++|+||||+||+++.+
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~  164 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLL---ICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTE  164 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhh---hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCC
Confidence            3     35899999999999999875221   13456899999999999999999999   8999999999999999999


Q ss_pred             CcEEEeecccccccCCCc----ccccccccccccc-----------ccCCCcccHHHHHHHHhhcccccccc------cc
Q 045682          200 NVAKLFDFSFSISIPEGE----LLTGLRAFDLARL-----------NEDDGYVALRDHVKKYFEEDRLNEII------DP  258 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~----~~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  258 (309)
                      +.+||+|||++.......    ...|...+.+|+.           ....+.|+++..++.++.+.......      ..
T Consensus       165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~  244 (291)
T cd06639         165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK  244 (291)
T ss_pred             CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence            999999999987654322    2233344444442           23456778887888777654322111      11


Q ss_pred             cccCCCC-CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 LIMGDRS-CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ~~~g~~~-~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...+..+ ...+......+.+++.+||+.+|++||++.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         245 IPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            1112111 1122345567999999999999999999999975

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=5.6e-33  Score=241.49  Aligned_cols=232  Identities=20%  Similarity=0.246  Sum_probs=174.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+..+.||+|+||.||+|.+  +++.||+|.+....  ....+.+.+|++++..++||||+++++++..++..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            3577889999999999999999  57999999876542  2234678899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|..+..       ....+++..+..++.|++.||+|||   +.+++|+||+|+||++++++.++|+|||++...
T Consensus        81 ~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~  150 (286)
T cd07846          81 FVDHTVLDDLEK-------YPNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL  150 (286)
T ss_pred             cCCccHHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeec
Confidence            999999988764       3445899999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCc----cccccccccccccc-------cCCCcccHHHHHHHHhhccccccccc-------------------------
Q 045682          214 PEGE----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEIID-------------------------  257 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  257 (309)
                      ....    ...+...+.+++..       ...+.|+++..++.++.+......-+                         
T Consensus       151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07846         151 AAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQK  230 (286)
T ss_pred             cCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhcc
Confidence            4322    11233333344322       22456667777777665432211000                         


Q ss_pred             -c----cccCCCCCCc-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 -P----LIMGDRSCSG-----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 -~----~~~g~~~~~~-----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       .    ..........     ....+..+.+++.+||+.+|++||++.+|++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence             0    0000000000     0133577999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.1e-32  Score=234.07  Aligned_cols=230  Identities=18%  Similarity=0.236  Sum_probs=176.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-----chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-----PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      +|+..+.||+|+||.||+|..  ++..|++|.+....     ....+.+.+|+.+++.++|+||+++++++..+...+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            366778999999999999998  68999999886543     23456789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      +||+++++|.+++.       ....+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||++.
T Consensus        81 ~e~~~~~~L~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~  150 (258)
T cd06632          81 LELVPGGSLAKLLK-------KYGSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAK  150 (258)
T ss_pred             EEecCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccce
Confidence            99999999999986       3456899999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCc---ccccccccccccc-------ccCCCcccHHHHHHHHhhccccccc------cccccc-CCCCCCchHHHHH
Q 045682          212 SIPEGE---LLTGLRAFDLARL-------NEDDGYVALRDHVKKYFEEDRLNEI------IDPLIM-GDRSCSGKEQQLQ  274 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-g~~~~~~~~~~~~  274 (309)
                      ......   ...|...+..++.       ....+.|+++..++.++.+......      ...... +..+ ..+...+.
T Consensus       151 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~  229 (258)
T cd06632         151 QVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELP-PIPDHLSD  229 (258)
T ss_pred             eccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCC-CcCCCcCH
Confidence            654332   1223322333332       2234566677777777654332111      111111 1111 12234567


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+.+++.+||+.+|++||++.+++.
T Consensus       230 ~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         230 EAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHHHHhhcCcccCcCHHHHhc
Confidence            8999999999999999999999974

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.3e-32  Score=238.41  Aligned_cols=228  Identities=21%  Similarity=0.283  Sum_probs=175.5

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      |+..+.||+|+||.||+|.+  ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            55566799999999999988  67899999987543 3445678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +++|.+++.        ...+++..+..++.|++.|+.|||   +.+++|+||+|+||+++.++.++|+|||++......
T Consensus        86 ~~~L~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06642          86 GGSALDLLK--------PGPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT  154 (277)
T ss_pred             CCcHHHHhh--------cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence            999999974        356899999999999999999999   899999999999999999999999999998765433


Q ss_pred             c----ccccccccccccccc------CCCcccHHHHHHHHhhccccccc------ccccccCCCCCCchHHHHHHHHHHH
Q 045682          217 E----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       217 ~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~l~~li  280 (309)
                      .    ...|...+.+++...      ..+.|+++..++.++.+.....-      ......+ .+.......+.++.+++
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li  233 (277)
T cd06642         155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-SPPTLEGQYSKPFKEFV  233 (277)
T ss_pred             chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC-CCCCCCcccCHHHHHHH
Confidence            2    122333344443322      23556666666666554432211      1111111 11222234567899999


Q ss_pred             HHcccCCCCCCCCHHHHHH
Q 045682          281 FECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+||+.+|++|||+.+|++
T Consensus       234 ~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         234 EACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             HHHccCCcccCcCHHHHHH
Confidence            9999999999999999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.2e-32  Score=233.78  Aligned_cols=232  Identities=20%  Similarity=0.279  Sum_probs=180.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|+..+.||+|+||.||+|.+  ++..+++|.+.....  ...+.+|+.+++.++||||+++++++..+...++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            35788899999999999999999  478999999866532  67899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        80 ~~~~~L~~~l~~------~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~  150 (256)
T cd06612          80 CGAGSVSDIMKI------TNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLT  150 (256)
T ss_pred             CCCCcHHHHHHh------CccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcc
Confidence            999999999852      3467899999999999999999999   8999999999999999999999999999988764


Q ss_pred             CCc----cccccccccccccc------cCCCcccHHHHHHHHhhccccccccc------ccccC-CCCCCchHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEIID------PLIMG-DRSCSGKEQQLQAYA  277 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g-~~~~~~~~~~~~~l~  277 (309)
                      ...    ...|...+..++..      ...+.|+++..++.++.+.......+      ..... ......+...+.++.
T Consensus       151 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (256)
T cd06612         151 DTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFN  230 (256)
T ss_pred             cCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHH
Confidence            332    22333444444432      22456666666776665443221111      00000 111112234567899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +++.+||+.+|++|||+.+|++
T Consensus       231 ~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         231 DFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHhcChhhCcCHHHHhc
Confidence            9999999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=4.4e-32  Score=235.03  Aligned_cols=230  Identities=20%  Similarity=0.270  Sum_probs=178.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .|+..+.||.|+||.||+|.+  ++..||+|.+.... ......+.+|+.++++++||||+++++++.++...++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            466778899999999999998  67899999987543 344567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++.        ..++++.++..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        85 ~~~~L~~~i~--------~~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640          85 GGGSALDLLR--------AGPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCcHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence            9999999985        346889999999999999999999   99999999999999999999999999999976644


Q ss_pred             Cc----cccccccccccccc------cCCCcccHHHHHHHHhhcccccccc------cccccCCCCCCchHHHHHHHHHH
Q 045682          216 GE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEII------DPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..    ...+...+.+++..      ...+.|+++..++.++.+.......      .....+. ++..+...+..+.++
T Consensus       154 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  232 (277)
T cd06640         154 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-PPTLTGEFSKPFKEF  232 (277)
T ss_pred             CccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC-CCCCchhhhHHHHHH
Confidence            32    11223333333322      1235566666666666554332111      1111111 223334677889999


Q ss_pred             HHHcccCCCCCCCCHHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      +..||+.+|.+||++.+++..
T Consensus       233 i~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         233 IDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHcccCcccCcCHHHHHhC
Confidence            999999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.1e-33  Score=249.75  Aligned_cols=231  Identities=15%  Similarity=0.097  Sum_probs=175.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||++..  +++.||+|.+....   ......+.+|+.++.+++||||+++++++.+....++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            3688889999999999999988  78999999986532   233466889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus        81 E~~~gg~L~~~l~-------~~~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~  150 (377)
T cd05629          81 EFLPGGDLMTMLI-------KYDTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTG  150 (377)
T ss_pred             eCCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccc
Confidence            9999999999986       4567899999999999999999999   99999999999999999999999999999863


Q ss_pred             cCCCc---------------------------------------------------cccccccccccccc------cCCC
Q 045682          213 IPEGE---------------------------------------------------LLTGLRAFDLARLN------EDDG  235 (309)
Q Consensus       213 ~~~~~---------------------------------------------------~~~g~~~~~~~~~~------~~~~  235 (309)
                      .....                                                   ...|...|.+|+..      ...+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  230 (377)
T cd05629         151 FHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECD  230 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCcee
Confidence            21100                                                   02355555555432      2346


Q ss_pred             cccHHHHHHHHhhccccc------ccccccccC--CCCCCchHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 045682          236 YVALRDHVKKYFEEDRLN------EIIDPLIMG--DRSCSGKEQQLQAYAHLIFECVNESPVDR---PTMVDVAK  299 (309)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~------~~~~~~~~g--~~~~~~~~~~~~~l~~li~~Cl~~~P~~R---Pt~~~l~~  299 (309)
                      .|+++..+++++.+....      +.+..+...  ....+.....+.++.+++..|+. +|.+|   ||+.+++.
T Consensus       231 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~  304 (377)
T cd05629         231 WWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS  304 (377)
T ss_pred             eEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence            677777777766544321      111222111  11111112345788999999997 77765   59988875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=2.1e-32  Score=237.58  Aligned_cols=243  Identities=18%  Similarity=0.219  Sum_probs=184.2

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      .+..++..+.+.|+..+.||.|+||.||+|.+  +++.+|+|.+.... .....+..|+.++..+ +||||+++++++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            35556666778899999999999999999999  67899999886553 3345688899999999 79999999999853


Q ss_pred             ------CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC
Q 045682          125 ------TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE  198 (309)
Q Consensus       125 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~  198 (309)
                            ....+++|||+++|+|.+++...     ....+++..++.++.|++.||+|||   +.+++|+||+|+||+++.
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~  156 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNT-----KGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTE  156 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCCcHHHHHHHc-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECC
Confidence                  45689999999999999998632     2345888899999999999999999   899999999999999999


Q ss_pred             CCcEEEeecccccccCCC----ccccccccccccccc-----------cCCCcccHHHHHHHHhhccccccccc------
Q 045682          199 ENVAKLFDFSFSISIPEG----ELLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLNEIID------  257 (309)
Q Consensus       199 ~~~~kl~Dfg~a~~~~~~----~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~------  257 (309)
                      ++.++|+|||++......    ....|...+.+++..           ...+.|+++..++.++.+........      
T Consensus       157 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~  236 (282)
T cd06636         157 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF  236 (282)
T ss_pred             CCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh
Confidence            999999999998754321    123344444444421           13577888888887766543221111      


Q ss_pred             ccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 PLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 ~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .......+.......+.++.+++.+||+.||.+|||+.+|++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         237 LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            111111111122346688999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=4.2e-32  Score=233.07  Aligned_cols=231  Identities=17%  Similarity=0.247  Sum_probs=180.1

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|...+.||+|+||.||+|..  +++.|++|.+.....  ...+.+.+|+.+++.++|+||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            377788999999999999998  778999999876543  3567899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.+||+|||++....
T Consensus        81 ~~~~~L~~~~~-------~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~  150 (264)
T cd06626          81 CSGGTLEELLE-------HGRILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             CCCCcHHHHHh-------hcCCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccC
Confidence            99999999986       4456889999999999999999999   9999999999999999999999999999987764


Q ss_pred             CCcc--------cccccccccccc---------ccCCCcccHHHHHHHHhhcccccccc-------cccccCCCCC-Cch
Q 045682          215 EGEL--------LTGLRAFDLARL---------NEDDGYVALRDHVKKYFEEDRLNEII-------DPLIMGDRSC-SGK  269 (309)
Q Consensus       215 ~~~~--------~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~-~~~  269 (309)
                      ....        ..+...+..++.         ....+.|+++..++.++.+.....-.       .....+..+. +..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  230 (264)
T cd06626         151 NNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDS  230 (264)
T ss_pred             CCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcc
Confidence            3321        223333433332         22346777777778777654332111       1111121111 111


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...+..+.+++.+||+.+|.+|||+.+++.
T Consensus       231 ~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         231 LQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            233678899999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=2.9e-32  Score=241.86  Aligned_cols=229  Identities=12%  Similarity=0.126  Sum_probs=168.2

Q ss_pred             cCceeec--CCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           63 EKVIMKR--SFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        63 ~~~lg~G--~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      .++||+|  +||+||++..  +++.||+|++....  ......+.+|+.+++.++||||+++++++..++..++||||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            5679999  6789999998  78999999987642  2334567789999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++..+     ....+++..++.++.|++.||+|||   +.+|+||||||+|||++.++.++++||+.+......
T Consensus        83 ~~~l~~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~  154 (327)
T cd08227          83 YGSAKDLICTH-----FMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINH  154 (327)
T ss_pred             CCcHHHHHHhh-----ccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence            99999998532     2345899999999999999999999   899999999999999999999999999865433211


Q ss_pred             -----------ccccccccccccccc--------cCCCcccHHHHHHHHhhccccccc------ccccccCCCC------
Q 045682          217 -----------ELLTGLRAFDLARLN--------EDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRS------  265 (309)
Q Consensus       217 -----------~~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~------  265 (309)
                                 ....+..++.+|+..        ...+.|+++..++.++.+.....-      ......+..+      
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  234 (327)
T cd08227         155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTT  234 (327)
T ss_pred             cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccccc
Confidence                       111223334444432        123556666666666544322110      0000000000      


Q ss_pred             --------------------------------------CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          266 --------------------------------------CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       266 --------------------------------------~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                                            .+.....+.++.+++.+||+.||++|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                                                  0011133567999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.5e-32  Score=262.84  Aligned_cols=246  Identities=15%  Similarity=0.188  Sum_probs=182.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|.+  +++.||+|++....   ....+++.+|+.++..++||||+++++++.+++..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            5688899999999999999998  68999999987532   233467999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCC----CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          133 EYINCGSLADRIRIQHNP----QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~----~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ||+++|+|.+++......    ......+++..++.++.||+.||+|||   +.+|+||||||+||+++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence            999999999998632110    112345677888999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCC----------------------cccccccccccccccc------CCCcccHHHHHHHHhhccccccc-----
Q 045682          209 FSISIPEG----------------------ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEI-----  255 (309)
Q Consensus       209 ~a~~~~~~----------------------~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----  255 (309)
                      +++.....                      ....|...+.+|+...      ..+.|+++..++.++.+......     
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            99765211                      0123555566665432      23556666666666554322111     


Q ss_pred             -cccc-ccCCCCCCchHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHHH
Q 045682          256 -IDPL-IMGDRSCSGKEQQLQAYAHLIFECVNESPVDRP-TMVDVAKKLKQMYR  306 (309)
Q Consensus       256 -~~~~-~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RP-t~~~l~~~L~~l~~  306 (309)
                       .... ........+....+..+.+++.+||+.||++|| ++.++.+.|+....
T Consensus       239 i~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        239 ISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             hhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence             1100 000000011124457799999999999999995 67777788877654

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.6e-32  Score=240.64  Aligned_cols=232  Identities=15%  Similarity=0.125  Sum_probs=171.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|...+.||.|+||.||+|.+  ++..||+|.+.... ......+.+|+.+++.++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            4588889999999999999998  67899999986543 23345678999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      ++ ++|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++....
T Consensus        86 ~~-~~l~~~l~~------~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          86 LD-KDLKQYLDD------CGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             cc-cCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence            98 489988751      2456889999999999999999999   9999999999999999999999999999987543


Q ss_pred             CCc----ccccccccccccccc-------CCCcccHHHHHHHHhhccccccccc---------------------cccc-
Q 045682          215 EGE----LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIID---------------------PLIM-  261 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~-  261 (309)
                      ...    ...+...+.+++...       ..+.|+++..++.++.+.......+                     .... 
T Consensus       156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (301)
T cd07873         156 IPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN  235 (301)
T ss_pred             CCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcc
Confidence            211    112233333444321       2345666666666654432211000                     0000 


Q ss_pred             ---C--CCCCC-------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 ---G--DRSCS-------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 ---g--~~~~~-------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                         .  ..+..       .....+..+.+|+.+||+.||.+|||+.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence               0  00000       00123567899999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=3e-32  Score=238.44  Aligned_cols=230  Identities=16%  Similarity=0.164  Sum_probs=171.1

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch-----hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR-----MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      +|+..+.||+|+||.||+|..  +++.|++|.+......     ....+..|+.++..++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            367778899999999999998  6899999998765322     335577899999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQH-EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |||+ +|+|.+++.       .. ..+++..+..++.||++||.|||   +.+++|+||+|+||+++.++.++|+|||++
T Consensus        81 ~e~~-~~~L~~~i~-------~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~  149 (298)
T cd07841          81 FEFM-ETDLEKVIK-------DKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLA  149 (298)
T ss_pred             Eccc-CCCHHHHHh-------ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceee
Confidence            9999 889999986       22 37999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCcc----ccccccccccccc-------cCCCcccHHHHHHHHhhccccccc------c-----------------
Q 045682          211 ISIPEGEL----LTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEI------I-----------------  256 (309)
Q Consensus       211 ~~~~~~~~----~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~-----------------  256 (309)
                      ........    ..+...+.+++..       ...+.|+++..++.++.+......      +                 
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (298)
T cd07841         150 RSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG  229 (298)
T ss_pred             eeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhh
Confidence            87644321    1122233333321       123455566566555544321100      0                 


Q ss_pred             -----cccccCCCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          257 -----DPLIMGDRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       257 -----~~~~~g~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                           +.......+...    ....+.++.+++.+||+++|++|||+.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence                 000000000000    0123577899999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.5e-32  Score=248.68  Aligned_cols=230  Identities=13%  Similarity=0.073  Sum_probs=175.4

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .|+..+.||+|+||.||+|..  +++.||+|.+....   ......+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            478889999999999999998  77899999986542   2334568899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        82 ~~~gg~L~~~l~-------~~~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625          82 YIPGGDMMSLLI-------RMGIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             CCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            999999999986       4457899999999999999999999   999999999999999999999999999997532


Q ss_pred             CCC---------------------------------------------------cccccccccccccccc------CCCc
Q 045682          214 PEG---------------------------------------------------ELLTGLRAFDLARLNE------DDGY  236 (309)
Q Consensus       214 ~~~---------------------------------------------------~~~~g~~~~~~~~~~~------~~~~  236 (309)
                      ...                                                   ....|...|.+|+...      ..+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di  231 (382)
T cd05625         152 RWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW  231 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeE
Confidence            100                                                   0123555565555432      3477


Q ss_pred             ccHHHHHHHHhhccccccc------ccccccC--CCCCCchHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 045682          237 VALRDHVKKYFEEDRLNEI------IDPLIMG--DRSCSGKEQQLQAYAHLIFECVNESPVDRPT---MVDVAK  299 (309)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~------~~~~~~g--~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt---~~~l~~  299 (309)
                      |+++..+++++.+......      .......  ....+.....++++.+++.+++ .+|.+|++   +.+++.
T Consensus       232 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         232 WSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             EechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            8888888888765443221      1111111  1111222244677888887765 49999987   777653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=4e-32  Score=237.31  Aligned_cols=232  Identities=17%  Similarity=0.240  Sum_probs=181.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ++|...+.||+|+||.||+|..  ++..|++|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            6788889999999999999987  77899999987655455677899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++.        ...+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        99 ~~~~L~~~~~--------~~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~  167 (293)
T cd06647          99 AGGSLTDVVT--------ETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (293)
T ss_pred             CCCcHHHHHh--------hcCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence            9999999985        345789999999999999999999   99999999999999999999999999998865543


Q ss_pred             Cc----cccccccccccccc------cCCCcccHHHHHHHHhhcccccc------ccccccc-CCCCCCchHHHHHHHHH
Q 045682          216 GE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIM-GDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-g~~~~~~~~~~~~~l~~  278 (309)
                      ..    ...|...+..++..      ...+.|+++..+|.++.+.....      .+..... +......+...+..+.+
T Consensus       168 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  247 (293)
T cd06647         168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD  247 (293)
T ss_pred             cccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHH
Confidence            22    12333334444432      23466777777777765543211      1111111 22222223345678999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ++.+||..+|.+||++.+++..
T Consensus       248 li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         248 FLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHHccCChhhCcCHHHHhcC
Confidence            9999999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-32  Score=235.73  Aligned_cols=230  Identities=20%  Similarity=0.245  Sum_probs=179.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +|+....||.|+||.||+|.+  ++..||+|.+.... ......+.+|+.+++.++|+||+++++++.++...++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            577788999999999999998  78999999987653 344567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++.        ...+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++.....
T Consensus        82 ~~~~L~~~~~--------~~~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  150 (274)
T cd06609          82 GGGSCLDLLK--------PGKLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS  150 (274)
T ss_pred             CCCcHHHHHh--------hcCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence            9999999985        237899999999999999999999   89999999999999999999999999999877643


Q ss_pred             Cc----cccccccccccccc------cCCCcccHHHHHHHHhhccccccc------ccccccCCCCCCchHHHHHHHHHH
Q 045682          216 GE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..    ...+...+..++..      ...+.|+++..++.++.+......      ......+..+.......+..+.++
T Consensus       151 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (274)
T cd06609         151 TMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDF  230 (274)
T ss_pred             cccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHH
Confidence            31    22333334444432      234667777777777665433221      111112222211111256789999


Q ss_pred             HHHcccCCCCCCCCHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+||..+|++|||+.++++
T Consensus       231 l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         231 VSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHhhCChhhCcCHHHHhh
Confidence            99999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=5.7e-33  Score=246.18  Aligned_cols=223  Identities=16%  Similarity=0.150  Sum_probs=168.8

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHH-HHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIV-YASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|..  +++.+|+|.+....   ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3699999999999998  78999999986531   223345556654 46778999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|..++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        81 ~~L~~~l~-------~~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~  150 (325)
T cd05604          81 GELFFHLQ-------RERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS  150 (325)
T ss_pred             CCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC
Confidence            99999886       4567999999999999999999999   999999999999999999999999999998753221 


Q ss_pred             ---cccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+|+...      ..+.|+++..++.++.+...      .++.+....+.....  ...+..+.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~  228 (325)
T cd05604         151 DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR--PGASLTAWSILE  228 (325)
T ss_pred             CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC--CCCCHHHHHHHH
Confidence               2334555565555422      34566666666666544322      222333333322111  134577889999


Q ss_pred             HcccCCCCCCCCHHHHH
Q 045682          282 ECVNESPVDRPTMVDVA  298 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~  298 (309)
                      +|++.+|.+||++.+.+
T Consensus       229 ~ll~~~p~~R~~~~~~~  245 (325)
T cd05604         229 ELLEKDRQRRLGAKEDF  245 (325)
T ss_pred             HHhccCHHhcCCCCCCH
Confidence            99999999999986433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=3e-32  Score=233.18  Aligned_cols=232  Identities=18%  Similarity=0.200  Sum_probs=181.9

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||+|+||.||.+..  +++.|++|.+...  .....+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            477788999999999999998  7899999998653  233456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++...     ....+++.+++.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        81 ~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~  152 (256)
T cd08218          81 CEGGDLYKKINAQ-----RGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLN  152 (256)
T ss_pred             CCCCcHHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecC
Confidence            9999999998521     2346889999999999999999999   8999999999999999999999999999997664


Q ss_pred             CCc----cccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ...    ...|...+.+++..      ...+.|+++..++.++.+...      .+.++....+..+.. +...+.++.+
T Consensus       153 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (256)
T cd08218         153 STVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV-SSHYSYDLRN  231 (256)
T ss_pred             cchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC-cccCCHHHHH
Confidence            432    11233333333321      234677777777777654332      223334444444332 2356788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+||+.+|++||++.+|++
T Consensus       232 li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         232 LVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHHhhCChhhCcCHHHHhh
Confidence            999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=4.2e-32  Score=234.35  Aligned_cols=231  Identities=16%  Similarity=0.208  Sum_probs=175.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc----------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP----------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      +|...+.||.|+||.||+|..  +++.||+|.+.....          ...+.+.+|+.++..++|||++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            366778999999999999987  788999998754211          12346788999999999999999999999999


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++||||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|
T Consensus        82 ~~~lv~e~~~~~~L~~~l~-------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d  151 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLR-------TYGRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISD  151 (272)
T ss_pred             ceEEEEecCCCCcHHHHHh-------hccCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEee
Confidence            9999999999999999986       3467899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc------ccccccccccccc--------ccCCCcccHHHHHHHHhhcccccccccc-------ccc---C
Q 045682          207 FSFSISIPEGE------LLTGLRAFDLARL--------NEDDGYVALRDHVKKYFEEDRLNEIIDP-------LIM---G  262 (309)
Q Consensus       207 fg~a~~~~~~~------~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---g  262 (309)
                      ||++.......      ...|...+.+++.        ....+.|+++..++.++.+.......+.       ...   .
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  231 (272)
T cd06629         152 FGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP  231 (272)
T ss_pred             ccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC
Confidence            99987653211      1223333333332        2234667777777777665432211110       001   1


Q ss_pred             CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.......+.++.+++..||+++|.+|||+.+|++
T Consensus       232 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         232 PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             cCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            1111111244678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-32  Score=261.03  Aligned_cols=250  Identities=19%  Similarity=0.279  Sum_probs=195.6

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEeC---------CeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeee
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFCQ---------ERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIG  120 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g  120 (309)
                      .++...++....+.||+|.||.|++|...         ...||||.++... ....+.+..|+++++.+ .|+||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            45666676777779999999999999862         3679999987653 34567899999999999 7999999999


Q ss_pred             eeeeCCceEEEEEeccCCChhhhhhhhC-CCCCCC--------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCC
Q 045682          121 CCLETQIPILVFEYINCGSLADRIRIQH-NPQPQH--------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKL  191 (309)
Q Consensus       121 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~--------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp  191 (309)
                      +|..++..++|+||+..|+|.+||+..+ ......        ..++..+.+.++.|||.||+||+   +.++|||||.+
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAa  446 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAA  446 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhh
Confidence            9999999999999999999999997554 001111        34999999999999999999999   99999999999


Q ss_pred             CCeeecCCCcEEEeecccccccCCCccc--cc---ccc--cccccc------ccCCCcccHHHHHHHHhhcc--c-----
Q 045682          192 SNILFNEENVAKLFDFSFSISIPEGELL--TG---LRA--FDLARL------NEDDGYVALRDHVKKYFEED--R-----  251 (309)
Q Consensus       192 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~g---~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~--~-----  251 (309)
                      +|||++.+..+||+|||+|+........  .+   +-|  +.+++.      ...++.|+++...|+.|.-.  +     
T Consensus       447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~  526 (609)
T KOG0200|consen  447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP  526 (609)
T ss_pred             hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence            9999999999999999999976554322  11   134  333332      22456777777777775422  1     


Q ss_pred             -ccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          252 -LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       252 -~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                       ..+++..+..|..... |..++.+++++|+.||+.+|++||++.++++.++...
T Consensus       527 ~~~~l~~~l~~G~r~~~-P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  527 PTEELLEFLKEGNRMEQ-PEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             cHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence             2233444444555433 4477999999999999999999999999999998864

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=5e-32  Score=232.54  Aligned_cols=233  Identities=19%  Similarity=0.250  Sum_probs=182.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|+..+.||+|++|.||+|..  ++..|++|++..... .....+.+|+..+..++|+|++++++++...+..++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            3577889999999999999999  589999999877643 4457799999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      +++++|.+++.       ....+++..++.++.|++.|++|||   + .+++|+||+|+||+++.++.++|+|||++...
T Consensus        81 ~~~~~L~~~l~-------~~~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~  150 (264)
T cd06623          81 MDGGSLADLLK-------KVGKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVL  150 (264)
T ss_pred             cCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceec
Confidence            99999999986       3477999999999999999999999   8 99999999999999999999999999998876


Q ss_pred             CCCcc----ccccccccccccc------cCCCcccHHHHHHHHhhccccc---------ccccccccCCCCCCchHHHHH
Q 045682          214 PEGEL----LTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN---------EIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       214 ~~~~~----~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      .....    ..+...+.+++..      ...+.|+++..++.++.+....         +.......+..+.......+.
T Consensus       151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (264)
T cd06623         151 ENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSP  230 (264)
T ss_pred             ccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCH
Confidence            44332    2233333333322      1235667777777666543221         112222222222222212678


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      .+.++++.||+.+|++|||+.++++.
T Consensus       231 ~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         231 EFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHhC
Confidence            89999999999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.8e-32  Score=238.59  Aligned_cols=231  Identities=16%  Similarity=0.203  Sum_probs=176.5

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      |+..+.||+|+||.||++.+  +++.||+|.+....   ......+.+|+.++..++|+||+.+++.+.+++..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            66678899999999999998  78999999986542   22235578899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++....
T Consensus        82 ~~g~~L~~~l~~~-----~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05630          82 MNGGDLKFHIYHM-----GEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVP  153 (285)
T ss_pred             cCCCcHHHHHHHh-----cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence            9999999998522     2346899999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCcc---cccccccccccccc------CCCcccHHHHHHHHhhccccccc---------ccccccCCCCCCchHHHHHHH
Q 045682          215 EGEL---LTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEI---------IDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       215 ~~~~---~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....   ..|...+.+++...      ..+.|+++..++.++.+......         ...... ..+...+...+.++
T Consensus       154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  232 (285)
T cd05630         154 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EVQEEYSEKFSPDA  232 (285)
T ss_pred             CCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-hhhhhcCccCCHHH
Confidence            4322   23444454444322      24677777777777655432211         001000 00111112445779


Q ss_pred             HHHHHHcccCCCCCCCC-----HHHHHH
Q 045682          277 AHLIFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      .+|+..||+.||++|||     +.++++
T Consensus       233 ~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         233 RSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            99999999999999999     788875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=2.3e-32  Score=235.52  Aligned_cols=235  Identities=19%  Similarity=0.279  Sum_probs=175.0

Q ss_pred             ceeecCCeEEEEEEeCC--------eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           65 VIMKRSFYTLYKGFCQE--------RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~~~--------~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .||+|+||.||+|.+..        ..+|+|.+.... ......+.+|+.+++.++||||+++++++......++||||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            58999999999998722        578999876543 244567899999999999999999999999989999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-----cEEEeecccc
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-----VAKLFDFSFS  210 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-----~~kl~Dfg~a  210 (309)
                      ++++|.+++............+++.+++.++.|++.||.|||   +.+++|+||+|+||+++.++     .++|+|||++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            999999998643221113345889999999999999999999   89999999999999999877     8999999998


Q ss_pred             cccCCCccc------ccccccccccc------ccCCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          211 ISIPEGELL------TGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~~~------~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      .........      .+...+.+++.      ....+.|+++..++.++. +...      .+.......+.. ...+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~  237 (269)
T cd05044         159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR-LQKPEN  237 (269)
T ss_pred             cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc-cCCccc
Confidence            765332211      11122222332      223466777777777664 3221      111111111221 122235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      .+..+.+++.+||+.+|.+||++.+|.+.|++
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         238 CPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             chHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            67889999999999999999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=8.4e-33  Score=245.09  Aligned_cols=224  Identities=20%  Similarity=0.207  Sum_probs=170.1

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHH-HHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNI-VYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  +++.||+|.+....   ......+..|. .+++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            3699999999999998  67889999986532   12223444444 456778999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        81 ~~L~~~~~-------~~~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~  150 (325)
T cd05602          81 GELFYHLQ-------RERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  150 (325)
T ss_pred             CcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC
Confidence            99999986       4566888899999999999999999   999999999999999999999999999998754221 


Q ss_pred             ---ccccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+++..      ...+.|+++..++.++.+...      .+.++....+...  .+...+..+.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~  228 (325)
T cd05602         151 GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ--LKPNITNSARHLLE  228 (325)
T ss_pred             CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcC--CCCCCCHHHHHHHH
Confidence               233455566555532      235778888888887655432      1222222222221  11245678999999


Q ss_pred             HcccCCCCCCCCHHHHHH
Q 045682          282 ECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~  299 (309)
                      .||+.+|.+||++.+.+.
T Consensus       229 ~~l~~~p~~R~~~~~~~~  246 (325)
T cd05602         229 GLLQKDRTKRLGAKDDFM  246 (325)
T ss_pred             HHcccCHHHCCCCCCCHH
Confidence            999999999999875443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.4e-32  Score=243.37  Aligned_cols=225  Identities=16%  Similarity=0.213  Sum_probs=174.8

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      +|+..+.||+|+||.||+|..  +++.||+|.+...   .......+..|..++..+ +|++|+++++++.+.+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            366778999999999999998  7889999998753   223345678899999888 4678889999999989999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++.++..++.|++.||.|||   +.+++||||||+|||++.++.+||+|||++..
T Consensus        81 Ey~~~g~L~~~i~-------~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~  150 (323)
T cd05615          81 EYVNGGDLMYHIQ-------QVGKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  150 (323)
T ss_pred             cCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccc
Confidence            9999999999986       4567999999999999999999999   99999999999999999999999999999875


Q ss_pred             cCCC----cccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEG----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....    ....|...+.+|+...      ..+.|+++..++.++.+....      .+...+..+...  .+...+.++
T Consensus       151 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~  228 (323)
T cd05615         151 HMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS--YPKSLSKEA  228 (323)
T ss_pred             cCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCccCCHHH
Confidence            4322    2234555665555322      346777887777776544321      222223322222  123456788


Q ss_pred             HHHHHHcccCCCCCCCCHH
Q 045682          277 AHLIFECVNESPVDRPTMV  295 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~  295 (309)
                      .+++.+||+.+|.+|++..
T Consensus       229 ~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         229 VSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             HHHHHHHcccCHhhCCCCC
Confidence            9999999999999999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-34  Score=255.58  Aligned_cols=231  Identities=14%  Similarity=0.209  Sum_probs=183.0

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      |.....||.|+||.||+|..  ++...|.|.+...+......|+-||.||..++||+||+|++.|+.++.+|++.|||+|
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence            44455799999999999998  4555678888888778889999999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC--
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE--  215 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~--  215 (309)
                      |.+...+-      .-+.++.+.++.-++.|++.||.|||   +.+|||||||+.|||++.+|.++|+|||.+-....  
T Consensus       114 GAVDaiml------EL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~  184 (1187)
T KOG0579|consen  114 GAVDAIML------ELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR  184 (1187)
T ss_pred             chHhHHHH------HhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHH
Confidence            99999875      24678999999999999999999999   99999999999999999999999999998755432  


Q ss_pred             --CccccccccccccccccC----CCcccHHHHHHHH-------hhcccc------cccccccccCCC-CCCchHHHHHH
Q 045682          216 --GELLTGLRAFDLARLNED----DGYVALRDHVKKY-------FEEDRL------NEIIDPLIMGDR-SCSGKEQQLQA  275 (309)
Q Consensus       216 --~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~------~~~~~~~~~g~~-~~~~~~~~~~~  275 (309)
                        ...+.|.+.|.+|+....    ...+....++|++       ....+.      ..++-.+...+. ....|..++..
T Consensus       185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~  264 (1187)
T KOG0579|consen  185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRS  264 (1187)
T ss_pred             hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhH
Confidence              246778888877764331    2223344444544       222221      122222222222 22356688999


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+++..||..||..||++.+|++
T Consensus       265 F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  265 FSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             HHHHHHHHHhcCCccCCCHHHHhh
Confidence            999999999999999999999974

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.5e-32  Score=245.26  Aligned_cols=232  Identities=12%  Similarity=0.144  Sum_probs=171.6

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeC------
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLET------  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------  125 (309)
                      ..++|...+.||+|+||.||+|..  ++..||+|.+....  ......+.+|+.++++++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            457799999999999999999988  77899999987542  23345678999999999999999999988643      


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ...++++|++ +++|.+++.        ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~  160 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVK--------CQKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRIL  160 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEc
Confidence            3568999988 669998874        356999999999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCCc-ccccccccccccccc-------CCCcccHHHHHHHHhhcccccc------cccccc--cCC------
Q 045682          206 DFSFSISIPEGE-LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNE------IIDPLI--MGD------  263 (309)
Q Consensus       206 Dfg~a~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~g~------  263 (309)
                      |||+++...... ...|...|.+|+...       ..+.|+++..++.++.+.....      .+....  .+.      
T Consensus       161 Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (343)
T cd07878         161 DFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVL  240 (343)
T ss_pred             CCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            999998764432 223445555555322       2466777777766655432110      000000  000      


Q ss_pred             --------------CCCCch-------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 --------------RSCSGK-------EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 --------------~~~~~~-------~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    .+..+.       ....+.+.+|+.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         241 KKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             HhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                          000000       011245789999999999999999999984

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-32  Score=234.88  Aligned_cols=230  Identities=17%  Similarity=0.249  Sum_probs=178.0

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhcc---CCcceeeeeeeeeCCceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMI---HRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .|+..+.||+|+||.||+|.+  ++..||+|.+... .......+.+|+.+++.+.   |||++++++++..+...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            467778899999999999998  7899999998654 3344567889999999996   999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++.        ...+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..
T Consensus        82 e~~~~~~L~~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  150 (277)
T cd06917          82 EYAEGGSVRTLMK--------AGPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAAL  150 (277)
T ss_pred             ecCCCCcHHHHHH--------ccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceee
Confidence            9999999999975        247899999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCCc----ccccccccccccc-------ccCCCcccHHHHHHHHhhccccccccc------ccccCCCCCCchHHHHHH
Q 045682          213 IPEGE----LLTGLRAFDLARL-------NEDDGYVALRDHVKKYFEEDRLNEIID------PLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~  275 (309)
                      .....    ...|...+.+++.       ....+.|+++..+|.++.+.......+      .......+.......+.+
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (277)
T cd06917         151 LNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKL  230 (277)
T ss_pred             cCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHH
Confidence            64432    1223333434442       223466777777777766543321111      111111111111125678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+++.+||+.+|++||++.+++.
T Consensus       231 ~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         231 LREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHhh
Confidence            999999999999999999999964

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-33  Score=246.32  Aligned_cols=222  Identities=15%  Similarity=0.147  Sum_probs=162.2

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc---cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM---IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      ||+|+||+||+|..  +++.||+|.+....   ......+..|..++...   +||||+++++++......++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999998  68999999986532   12233455677777665   699999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|.+++.       ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||++...... 
T Consensus        81 g~L~~~l~-------~~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~  150 (330)
T cd05586          81 GELFWHLQ-------KEGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN  150 (330)
T ss_pred             ChHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC
Confidence            99999986       4567899999999999999999999   999999999999999999999999999998754322 


Q ss_pred             ---ccccccccccccccccC-------CCcccHHHHHHHHhhccc------ccccccccccCCCCCCchHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~li  280 (309)
                         ....|...|.+|+....       .+.|+++..++.++.+..      ..+....+..+....+. ...+.++.+++
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li  229 (330)
T cd05586         151 KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK-NVLSDEGRQFV  229 (330)
T ss_pred             CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC-ccCCHHHHHHH
Confidence               12345666666654322       233333333333322211      11222222223222211 13467789999


Q ss_pred             HHcccCCCCCCCC----HHHHH
Q 045682          281 FECVNESPVDRPT----MVDVA  298 (309)
Q Consensus       281 ~~Cl~~~P~~RPt----~~~l~  298 (309)
                      .+||+.||.+||+    +.+++
T Consensus       230 ~~~L~~~P~~R~~~~~~~~~ll  251 (330)
T cd05586         230 KGLLNRNPQHRLGAHRDAVELK  251 (330)
T ss_pred             HHHcCCCHHHCCCCCCCHHHHh
Confidence            9999999999985    55554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=9.9e-32  Score=232.86  Aligned_cols=228  Identities=20%  Similarity=0.278  Sum_probs=175.9

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      |+..+.||.|+||.||+|.+  ++..||+|.+.... ......+.+|+.++..++||||+++++++..+...++||||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            66778899999999999987  67899999876543 3344678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +++|.+++.        ...+++..+..++.|++.|+.|||   +.+++|+||+|+||+++.++.++|+|||++......
T Consensus        86 ~~~l~~~i~--------~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06641          86 GGSALDLLE--------PGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT  154 (277)
T ss_pred             CCcHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence            999999985        346899999999999999999999   999999999999999999999999999998765432


Q ss_pred             c----cccccccccccccc------cCCCcccHHHHHHHHhhccccccc------ccccccCCCCCCchHHHHHHHHHHH
Q 045682          217 E----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       217 ~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~l~~li  280 (309)
                      .    ...+...+..++..      ...+.|+++..++.++.+......      ......+..+ ..+...+.++.+++
T Consensus       155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i  233 (277)
T cd06641         155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP-TLEGNYSKPLKEFV  233 (277)
T ss_pred             hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC-CCCcccCHHHHHHH
Confidence            2    12233333333322      123556666666666554432211      1111112111 12234567899999


Q ss_pred             HHcccCCCCCCCCHHHHHH
Q 045682          281 FECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+||+.+|.+||++.++++
T Consensus       234 ~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         234 EACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             HHHccCChhhCcCHHHHHh
Confidence            9999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=4.2e-32  Score=236.27  Aligned_cols=230  Identities=16%  Similarity=0.188  Sum_probs=174.5

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      |...+.||+|+||+||+|.+  +++.+|+|.+....   ......+.+|+.++..++|+||+.+.+++..++..+++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            56678899999999999999  78899999986542   22234578899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++...     ....+++..+..++.|++.||.|||   +.+|+||||||+||++++++.+||+|||++....
T Consensus        82 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632          82 MNGGDLKFHIYNM-----GNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             ccCccHHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence            9999999887521     2346999999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCc---ccccccccccccccc------CCCcccHHHHHHHHhhccccccc---------ccc-cccCCCCCCchHHHHHH
Q 045682          215 EGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEI---------IDP-LIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       215 ~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~g~~~~~~~~~~~~~  275 (309)
                      ...   ...|...+.+|+...      ..+.|+++..++.++.+......         +.. ...+.  ...+...+.+
T Consensus       154 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  231 (285)
T cd05632         154 EGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--EVYSAKFSEE  231 (285)
T ss_pred             CCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc--cccCccCCHH
Confidence            322   123444555554322      23667777777776654432111         111 11111  1112245577


Q ss_pred             HHHHHHHcccCCCCCCCC-----HHHHHH
Q 045682          276 YAHLIFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      +.+|+..||+.||++|||     +.+++.
T Consensus       232 ~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         232 AKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            899999999999999999     556653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=4.7e-32  Score=231.96  Aligned_cols=232  Identities=17%  Similarity=0.196  Sum_probs=177.3

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee-CCceEEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE-TQIPILVFE  133 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e  133 (309)
                      +|+..+.||+|++|.||++..  +++.||+|++....  ....+.+.+|+.++++++|+|++++++.+.. +...+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            477888999999999999998  67899999986542  2345678899999999999999999988764 446789999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++...     ....+++.++..++.|++.|++|||   +.+++|+||+|+||+++.++.++|+|||++...
T Consensus        81 ~~~~~~l~~~l~~~-----~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~  152 (257)
T cd08223          81 FCEGGDLYHKLKEQ-----KGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVL  152 (257)
T ss_pred             ccCCCcHHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEe
Confidence            99999999998621     2456899999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCc----ccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHH
Q 045682          214 PEGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ....    ...|...+.+|+...      ..+.|+++..++.++.+....      ........+..+. .+...+.++.
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (257)
T cd08223         153 ENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP-MPKDYSPELG  231 (257)
T ss_pred             cccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC-CccccCHHHH
Confidence            4321    223444444444322      235666666666665543221      1222223333322 2335678899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +++.+||+.+|++|||+.++++
T Consensus       232 ~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         232 ELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHhccCcccCCCHHHHhc
Confidence            9999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=8e-32  Score=232.03  Aligned_cols=231  Identities=17%  Similarity=0.225  Sum_probs=173.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-----chhHHHHHHHHHHHhhccCCcceeeeeeeee--CCce
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-----PRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIP  128 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~  128 (309)
                      .+|...+.||+|+||.||+|..  ++..|++|.+....     ......+.+|+.+++.++||||+++++++..  +...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4688899999999999999998  68999999876432     2234568899999999999999999998875  3567


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++++||+++++|.+++.       ....+++...+.++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||
T Consensus        82 ~l~~e~~~~~~L~~~l~-------~~~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg  151 (266)
T cd06651          82 TIFMEYMPGGSVKDQLK-------AYGALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFG  151 (266)
T ss_pred             EEEEeCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCC
Confidence            89999999999999986       3456899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCc-------cccccccccccccc------cCCCcccHHHHHHHHhhccccccc------ccccccCCCCCCch
Q 045682          209 FSISIPEGE-------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSCSGK  269 (309)
Q Consensus       209 ~a~~~~~~~-------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~  269 (309)
                      ++.......       ...+...|.+++..      ...+.|+++..++.++.+.....-      +.........+..+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  231 (266)
T cd06651         152 ASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLP  231 (266)
T ss_pred             CccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCc
Confidence            987543211       12233334444432      234667777777777665432211      11111111122223


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ....+.+.+++ +||..+|++|||+.+|+.
T Consensus       232 ~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         232 SHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             hhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            34567778887 788899999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.5e-32  Score=245.29  Aligned_cols=231  Identities=14%  Similarity=0.131  Sum_probs=171.7

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-----
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-----  126 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----  126 (309)
                      ..++|...+.||+|+||.||++..  ++..||+|.+...  .......+.+|+.++..++||||+++++++....     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            457899999999999999999998  7899999998653  2344567889999999999999999999986543     


Q ss_pred             -ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          127 -IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       127 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                       ..++||||+++ +|.+.+.         ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~---------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~  165 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH---------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKIL  165 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh---------ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEe
Confidence             47999999976 6766653         34788899999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccccccccc------------------
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEIIDP------------------  258 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  258 (309)
                      |||+++......   ...|...|.+|+...      ..+.|+++..++.++.+.....-.+.                  
T Consensus       166 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~  245 (359)
T cd07876         166 DFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF  245 (359)
T ss_pred             cCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHH
Confidence            999997653332   123444455554322      34667777777777654322110000                  


Q ss_pred             ----------cccC--CCCC----------------CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 ----------LIMG--DRSC----------------SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ----------~~~g--~~~~----------------~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                ....  ..+.                ......+.++.+|+.+||+.||++|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence                      0000  0000                000112466899999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=2.5e-32  Score=242.20  Aligned_cols=219  Identities=19%  Similarity=0.229  Sum_probs=171.2

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|..  +++.||+|.+....   ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            3699999999999998  67899999987642   23445688999999998 799999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC--
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE--  215 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~--  215 (309)
                      |+|.+++.       ....+++..+..++.||+.||+|||   +.+++||||||+|||++.++.+||+|||+++....  
T Consensus        81 ~~L~~~~~-------~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~  150 (327)
T cd05617          81 GDLMFHMQ-------RQRKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG  150 (327)
T ss_pred             CcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC
Confidence            99999886       4567999999999999999999999   99999999999999999999999999999875321  


Q ss_pred             --Ccccccccccccccccc------CCCcccHHHHHHHHhhcccccccc-------------cccccCCCCCCchHHHHH
Q 045682          216 --GELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEII-------------DPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       216 --~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~g~~~~~~~~~~~~  274 (309)
                        .....|...|.+|+...      ..+.|+++..++.++.+.......             .....+  +...+...+.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~  228 (327)
T cd05617         151 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSV  228 (327)
T ss_pred             CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCH
Confidence              11334566665555432      356788888888776554432211             111111  1112234557


Q ss_pred             HHHHHHHHcccCCCCCCCCH
Q 045682          275 AYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~  294 (309)
                      .+.+++.+||+.||.+||++
T Consensus       229 ~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         229 KASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHHHHHHHhccCHHHcCCC
Confidence            78999999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=8.1e-32  Score=237.98  Aligned_cols=231  Identities=20%  Similarity=0.286  Sum_probs=181.6

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      |+..+.||+|+||.||+|..  ++..||+|.+....   ......+.+|+.+++.++|||++++++++.++...++||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            66778899999999999998  67899999986532   23345788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++ +|.+++..      ....+++.++..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus       107 ~~g-~l~~~~~~------~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         107 CLG-SASDLLEV------HKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             CCC-CHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            975 88877642      2456899999999999999999999   9999999999999999999999999999988766


Q ss_pred             CCccccccccccccccc---------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHH
Q 045682          215 EGELLTGLRAFDLARLN---------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       215 ~~~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ......|...+.+++..         ...+.|+++..++.++.+....      ........+..+.......+..+.++
T Consensus       177 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  256 (317)
T cd06635         177 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNF  256 (317)
T ss_pred             CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHH
Confidence            55555555555554432         1236677777777776655321      11122222333333333566789999


Q ss_pred             HHHcccCCCCCCCCHHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      +.+||+.+|.+||++.+|++.
T Consensus       257 i~~~l~~~p~~Rpt~~~il~~  277 (317)
T cd06635         257 VDSCLQKIPQDRPTSEELLKH  277 (317)
T ss_pred             HHHHccCCcccCcCHHHHHhC
Confidence            999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=9.1e-33  Score=249.70  Aligned_cols=143  Identities=17%  Similarity=0.130  Sum_probs=129.9

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +|+..+.||+|+||.||+|..  +++.||+|.+....   ......+.+|+.++..++||||+++++.+.+++..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            688899999999999999998  78999999986532   2234568899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |+++|+|.+++.       ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||++.
T Consensus        82 ~~~~g~L~~~i~-------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          82 YIPGGDMMSLLI-------RLGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             CCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            999999999986       4567899999999999999999999   9999999999999999999999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=4.3e-32  Score=235.82  Aligned_cols=231  Identities=16%  Similarity=0.169  Sum_probs=173.9

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||+|+||.||+|.+  ++..|++|++....  ......+.+|+.++++++||||+++++++..+...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            467788999999999999998  78999999987653  33456799999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      + +++|.+++..      ....+++.++..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        81 ~-~~~L~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~  150 (286)
T cd07832          81 M-PSDLSEVLRD------EERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFS  150 (286)
T ss_pred             c-CCCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeeccccc
Confidence            9 8999999852      2366999999999999999999999   8999999999999999999999999999988764


Q ss_pred             CCc-----cccccccccccccc-------cCCCcccHHHHHHHHhhccccccc----------ccc--------------
Q 045682          215 EGE-----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEI----------IDP--------------  258 (309)
Q Consensus       215 ~~~-----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~--------------  258 (309)
                      ...     ...|...+.+|+..       ...+.|+++..++.++.+......          +..              
T Consensus       151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07832         151 EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS  230 (286)
T ss_pred             CCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence            432     12233344444432       223455555555555544221100          000              


Q ss_pred             ---cccCCCCCCc-------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 ---LIMGDRSCSG-------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ---~~~g~~~~~~-------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                         ......+...       ....+..+.+++++||+.+|++|||+.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence               0000000000       0123578899999999999999999999975

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=3.4e-32  Score=239.09  Aligned_cols=235  Identities=15%  Similarity=0.172  Sum_probs=177.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||++.+  +++.|++|.+....   ......+.+|+.++..++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            3688889999999999999998  67899999986643   233456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||+++.
T Consensus        81 e~~~g~~L~~~l~-------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          81 EYVEGGDCATLLK-------NIGALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             ecCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            9999999999986       4457899999999999999999999   89999999999999999999999999998864


Q ss_pred             cCCC-------------------ccccccccccccccc------cCCCcccHHHHHHHHhhccc------cccccccccc
Q 045682          213 IPEG-------------------ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDR------LNEIIDPLIM  261 (309)
Q Consensus       213 ~~~~-------------------~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  261 (309)
                      ....                   ....|...+.+++..      ...+.|+++..+++++.+..      ..++......
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~  230 (305)
T cd05609         151 GLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS  230 (305)
T ss_pred             cCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            2110                   011223333333321      12355666666666654432      2223333333


Q ss_pred             CCCCCC-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          262 GDRSCS-GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       262 g~~~~~-~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                      +..+.+ .....+.++.+++.+||+.+|++||++.++.+.|+
T Consensus       231 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~  272 (305)
T cd05609         231 DDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ  272 (305)
T ss_pred             cccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence            322221 11245678999999999999999999766555544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1.7e-31  Score=268.29  Aligned_cols=233  Identities=23%  Similarity=0.298  Sum_probs=180.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ..|.....||+|+||.||+|.+  ++..||||++......    ...|++.+++++|||||+++|+|.+++..++||||+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            4577788999999999999997  7899999998654322    234688899999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++.          .++|..+.+++.|+|.||+|||+.++.+|+||||||+||+++.++.+++. ||.+.....
T Consensus       766 ~~g~L~~~l~----------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~  834 (968)
T PLN00113        766 EGKNLSEVLR----------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT  834 (968)
T ss_pred             CCCcHHHHHh----------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence            9999999985          38999999999999999999997667799999999999999999888875 665544333


Q ss_pred             Ccccccccccccccc------ccCCCcccHHHHHHHHhhccccc------------------------ccccccccCCCC
Q 045682          216 GELLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLN------------------------EIIDPLIMGDRS  265 (309)
Q Consensus       216 ~~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~g~~~  265 (309)
                      .....|...|.+|+.      ....+.|+++..+|+++.+....                        .++++...+.. 
T Consensus       835 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  913 (968)
T PLN00113        835 DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV-  913 (968)
T ss_pred             CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC-
Confidence            222234444555543      22357788888888886654321                        11222222221 


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                       ..+.....++.+++.+||+.+|++||||.+|+++|+++.++
T Consensus       914 -~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~  954 (968)
T PLN00113        914 -SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS  954 (968)
T ss_pred             -CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence             12235667789999999999999999999999999998764

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=9.1e-32  Score=231.49  Aligned_cols=231  Identities=16%  Similarity=0.199  Sum_probs=175.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-----chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--Cce
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-----PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIP  128 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~  128 (309)
                      .+|...+.||+|+||.||.|..  ++..||+|.+....     ......+.+|+.++..++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4688899999999999999998  68999999875421     12345788999999999999999999988763  467


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      +++|||+++++|.+++.       ....+++.....++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||
T Consensus        82 ~~v~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg  151 (265)
T cd06652          82 SIFMEHMPGGSIKDQLK-------SYGALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFG  151 (265)
T ss_pred             EEEEEecCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCc
Confidence            89999999999999986       4456889999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCC-------Ccccccccccccccccc------CCCcccHHHHHHHHhhccccccc------ccccccCCCCCCch
Q 045682          209 FSISIPE-------GELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSCSGK  269 (309)
Q Consensus       209 ~a~~~~~-------~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~  269 (309)
                      ++.....       ....+|...+.+++...      ..+.|+++..++.++.+......      +.........+..+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  231 (265)
T cd06652         152 ASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLP  231 (265)
T ss_pred             cccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCc
Confidence            9875432       11233444554444322      24667777777777655433211      11111111122223


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...+..+.+++.+||. +|.+||++.+|++
T Consensus       232 ~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         232 PHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             hhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            4566788999999995 9999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-32  Score=249.05  Aligned_cols=226  Identities=15%  Similarity=0.243  Sum_probs=190.0

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  129 (309)
                      ..++|....+||+|.||+|+.+..  +++.+|||.+++..   ....+..+.|-.++... +||.++.++.++++....|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            346788899999999999999999  78899999998864   45567788999998888 6999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+.||++..+.        ....+++..+.-++..|+-||.|||   +++|||||||.+|||+|.+|.+||+|||+
T Consensus       446 fvmey~~Ggdm~~~~--------~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGl  514 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHI--------HTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGL  514 (694)
T ss_pred             EEEEecCCCcEEEEE--------ecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEeccccc
Confidence            999999999966653        3578999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccC----CCccccccccccccccccCC------CcccHHHHHHHH------hhcccccccccccccCCCCCCchHHHH
Q 045682          210 SISIP----EGELLTGLRAFDLARLNEDD------GYVALRDHVKKY------FEEDRLNEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       210 a~~~~----~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      ++...    .....+|++-|.+|+.....      ++|+++..++++      |.+..-.+++|.++..+...+  ...+
T Consensus       515 cKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP--~~ls  592 (694)
T KOG0694|consen  515 CKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYP--RFLS  592 (694)
T ss_pred             ccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC--Cccc
Confidence            98653    34578899999888765543      445555555655      344445678888887765543  4678


Q ss_pred             HHHHHHHHHcccCCCCCCCCH
Q 045682          274 QAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~  294 (309)
                      .+..+|+++.+..+|++|.-+
T Consensus       593 ~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  593 KEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHHHHHhccCcccccCC
Confidence            899999999999999999765

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=2.4e-32  Score=238.60  Aligned_cols=230  Identities=18%  Similarity=0.190  Sum_probs=175.9

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      |.....||+|+||.||++..  ++..||+|.+........+.+.+|+.++..++||||+++++.+..++..++||||+++
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            44456799999999999998  7889999998766555567789999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      ++|.+++.        ...+++..+..++.||+.||.|||   +.+++|+||||+||+++.++.++|+|||++.......
T Consensus       104 ~~L~~~~~--------~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~  172 (292)
T cd06658         104 GALTDIVT--------HTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV  172 (292)
T ss_pred             CcHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence            99999874        346899999999999999999999   8999999999999999999999999999987543221


Q ss_pred             ----cccccccccccccc------cCCCcccHHHHHHHHhhccccccccc------ccccCC-CCCCchHHHHHHHHHHH
Q 045682          218 ----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEIID------PLIMGD-RSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       218 ----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~-~~~~~~~~~~~~l~~li  280 (309)
                          ...|...+.+++..      ...+.|+++..+++++.+.......+      ...... .........+..+.+++
T Consensus       173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  252 (292)
T cd06658         173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFL  252 (292)
T ss_pred             ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHH
Confidence                22344444444432      23466677767776665543221111      100000 01111123456789999


Q ss_pred             HHcccCCCCCCCCHHHHHHH
Q 045682          281 FECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ..||..+|.+|||+.++++.
T Consensus       253 ~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         253 DLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHccCChhHCcCHHHHhhC
Confidence            99999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=9.6e-32  Score=231.47  Aligned_cols=231  Identities=16%  Similarity=0.231  Sum_probs=178.0

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC------chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK------PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      +|+....||+|+||.||+|..  ++..||+|.+....      ....+.+.+|+++++.++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            477888999999999999987  78999999986532      1234678999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeeccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSF  209 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~  209 (309)
                      |+||+++++|.+++.       ...++++..+..++.|++.||+|||   +.+++|+||+|+||+++.++ .+||+|||+
T Consensus        81 v~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~  150 (268)
T cd06630          81 FVEWMAGGSVSHLLS-------KYGAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGA  150 (268)
T ss_pred             EEeccCCCcHHHHHH-------HhCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccc
Confidence            999999999999986       4457899999999999999999999   99999999999999998776 599999999


Q ss_pred             ccccCCCc--------ccccccccccccc------ccCCCcccHHHHHHHHhhccccccc---------ccccccCCCCC
Q 045682          210 SISIPEGE--------LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNEI---------IDPLIMGDRSC  266 (309)
Q Consensus       210 a~~~~~~~--------~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g~~~~  266 (309)
                      +.......        ...|...+.+++.      ....+.|+++..++.++.+......         +..........
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  230 (268)
T cd06630         151 AARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAP  230 (268)
T ss_pred             ccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCC
Confidence            87654321        1123333333332      2234677777777777655432111         11111111222


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+...+.++.+++.+||+.+|.+|||+.++++
T Consensus       231 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            233456788999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1e-31  Score=230.42  Aligned_cols=237  Identities=17%  Similarity=0.174  Sum_probs=179.7

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~  132 (309)
                      +|+..+.||.|+||.||++..  ++..+|+|.+...  .....+.+.+|+.+++.++||||+++++++..  +...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            467788999999999999988  7789999998653  23445678899999999999999999998764  45679999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF--PRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~--~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||+++++|.+++....   .....+++..++.++.|++.||.|||..+  +.+++|+||+|+||+++.++.+||+|||++
T Consensus        81 e~~~~~~L~~~l~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~  157 (265)
T cd08217          81 EYCEGGDLAQLIQKCK---KERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA  157 (265)
T ss_pred             hhccCCCHHHHHHHHh---hcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence            9999999999986332   13567999999999999999999999443  578999999999999999999999999999


Q ss_pred             cccCCCcc----ccccccccccccc------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHH
Q 045682          211 ISIPEGEL----LTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       211 ~~~~~~~~----~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      ........    ..|...+.+++..      ...+.|+++..++.++.+....      .+......+..+. .+...+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~  236 (265)
T cd08217         158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR-IPYRYSS  236 (265)
T ss_pred             ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCC-CccccCH
Confidence            87654332    2233444444432      1235666666666665543221      1222222232222 2235668


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+.+++..||+.+|++|||+.+|++
T Consensus       237 ~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         237 ELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhh
Confidence            8999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1.5e-31  Score=232.76  Aligned_cols=234  Identities=18%  Similarity=0.255  Sum_probs=182.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++.|+....||+|++|.||+|.+  ++..+++|.+..... ....+.+|+.++..++|+|++++++++...+..++|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            456688888999999999999999  589999999876644 45678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++...      ...+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++...
T Consensus        96 ~~~~~~L~~~l~~~------~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  166 (286)
T cd06614          96 YMDGGSLTDIITQN------FVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQL  166 (286)
T ss_pred             ccCCCcHHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence            99999999998621      137999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCCc----ccccccccccccc------ccCCCcccHHHHHHHHhhccccccc------ccccccCCC-CCCchHHHHHHH
Q 045682          214 PEGE----LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDR-SCSGKEQQLQAY  276 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~-~~~~~~~~~~~l  276 (309)
                      ....    ...+...+..++.      ....+.|+++..++.++.+......      ......... ........+.++
T Consensus       167 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (286)
T cd06614         167 TKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEF  246 (286)
T ss_pred             ccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHH
Confidence            3321    1223333333332      2245778888888888765432111      111111111 112222366889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+++.+||+.+|..|||+.+|++
T Consensus       247 ~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         247 KDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHHHHhccChhhCcCHHHHhh
Confidence            99999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=5.7e-32  Score=232.49  Aligned_cols=232  Identities=15%  Similarity=0.177  Sum_probs=179.7

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +|+..+.||.|+||.||++.+  +++.+++|.+.... ......+.+|+.+++.++||||+++++++..++..++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            567778899999999999999  58999999987653 344567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      ++++|.+++..      ....+++..+..++.|++.||+|||   + .+++|+||+|+||+++.++.++|+|||.+....
T Consensus        82 ~~~~L~~~~~~------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~  152 (265)
T cd06605          82 DGGSLDKILKE------VQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV  152 (265)
T ss_pred             CCCcHHHHHHH------ccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence            99999999862      1267899999999999999999999   7 999999999999999999999999999886543


Q ss_pred             CCc--cccccccccccccc------cCCCcccHHHHHHHHhhccccc-----------ccccccccCCCCCCchHHHHHH
Q 045682          215 EGE--LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN-----------EIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       215 ~~~--~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      ...  ...+...+..++..      ...+.|+++..++.++.+....           +.+.....+..+.......+.+
T Consensus       153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (265)
T cd06605         153 NSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPD  232 (265)
T ss_pred             HHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHH
Confidence            211  12333334334321      2346677777777766543211           1222223333222222236788


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+++..||..+|++|||+.+++.
T Consensus       233 ~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         233 FQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHhh
Confidence            999999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=3.9e-32  Score=237.85  Aligned_cols=227  Identities=18%  Similarity=0.212  Sum_probs=175.2

Q ss_pred             ccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           62 SEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      ....||+|+||.||+|..  ++..||+|.+........+.+.+|+.++..++||||+++++++..++..++|+||+++++
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            344699999999999988  689999999876554555678899999999999999999999999999999999999999


Q ss_pred             hhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC---
Q 045682          140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG---  216 (309)
Q Consensus       140 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---  216 (309)
                      |.+++.        ...+++..++.++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||++......   
T Consensus       105 L~~~~~--------~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~  173 (297)
T cd06659         105 LTDIVS--------QTRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK  173 (297)
T ss_pred             HHHHHh--------hcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc
Confidence            999874        356899999999999999999999   899999999999999999999999999998755432   


Q ss_pred             -cccccccccccccccc------CCCcccHHHHHHHHhhcccccc------cccccccCCC-CCCchHHHHHHHHHHHHH
Q 045682          217 -ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDR-SCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       217 -~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~-~~~~~~~~~~~l~~li~~  282 (309)
                       ....|...|.+++...      ..+.|+++..+++++.+.....      .+........ ........+..+.+++.+
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  253 (297)
T cd06659         174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLER  253 (297)
T ss_pred             ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHH
Confidence             1233444454444322      2466777777777765543211      1111111111 111112345678999999


Q ss_pred             cccCCCCCCCCHHHHHH
Q 045682          283 CVNESPVDRPTMVDVAK  299 (309)
Q Consensus       283 Cl~~~P~~RPt~~~l~~  299 (309)
                      ||+.+|.+||++.+|++
T Consensus       254 ~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         254 MLTREPQERATAQELLD  270 (297)
T ss_pred             HhcCCcccCcCHHHHhh
Confidence            99999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=9.2e-32  Score=229.95  Aligned_cols=232  Identities=19%  Similarity=0.240  Sum_probs=179.2

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||+|+||.||++..  ++..+|+|.+....  ......+.+|+.+++.++||||+++++.+..++..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            477788999999999999988  77899999986542  34456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-CcEEEeeccccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-NVAKLFDFSFSISI  213 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a~~~  213 (309)
                      +++++|.+++...     ....+++..+..++.+++.||+|||   +.+++|+||+|+||+++.+ +.+||+|||++...
T Consensus        81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~  152 (256)
T cd08220          81 APGGTLAEYIQKR-----CNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL  152 (256)
T ss_pred             CCCCCHHHHHHHh-----cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence            9999999998622     2456899999999999999999999   9999999999999999855 46899999999876


Q ss_pred             CCCc---cccccccccccccc------cCCCcccHHHHHHHHhhcccccc------cccccccCCCCCCchHHHHHHHHH
Q 045682          214 PEGE---LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       214 ~~~~---~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ....   ...|...|.+++..      ...+.|+++..++.++.+.....      .......+.... .+...+.++.+
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~  231 (256)
T cd08220         153 SSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP-ISDRYSPDLRQ  231 (256)
T ss_pred             CCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC-CCCCcCHHHHH
Confidence            5432   22334444444432      23467777777777765432221      122222222221 12245678999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+||+.+|.+|||+.++++
T Consensus       232 li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         232 LILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHccCChhhCCCHHHHhh
Confidence            999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-32  Score=247.60  Aligned_cols=226  Identities=21%  Similarity=0.271  Sum_probs=185.3

Q ss_pred             ceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCChhh
Q 045682           65 VIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLAD  142 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~  142 (309)
                      +||+|.||+||-|++  +...+|||.+.........-+.+||.+.++++|.|||+++|.+.+++..-+.||-++||||.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            699999999999999  567789999988777777889999999999999999999999999999999999999999999


Q ss_pred             hhhhhCCCCCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec-CCCcEEEeeccccccc----CC
Q 045682          143 RIRIQHNPQPQHEPL--LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN-EENVAKLFDFSFSISI----PE  215 (309)
Q Consensus       143 ~l~~~~~~~~~~~~l--~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~~----~~  215 (309)
                      +|.      ...+++  ++.+.-.+..||++||.|||   +..|||||||-.|+||+ -.|.+||+|||-++..    +-
T Consensus       662 LLr------skWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~  732 (1226)
T KOG4279|consen  662 LLR------SKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC  732 (1226)
T ss_pred             HHH------hccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence            996      245666  78888899999999999999   99999999999999996 5689999999987665    44


Q ss_pred             Ccccccccccccccccc-CCCcccHHHHHHHH-------hhcc-------cccccccccccCCCCCCchHHHHHHHHHHH
Q 045682          216 GELLTGLRAFDLARLNE-DDGYVALRDHVKKY-------FEED-------RLNEIIDPLIMGDRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       216 ~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~l~~li  280 (309)
                      .+.+||.-.|.+|+... +...+..+.++|++       ..+.       +....+-.+-.-..-++.|...+.+...+|
T Consensus       733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Fi  812 (1226)
T KOG4279|consen  733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFI  812 (1226)
T ss_pred             ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHH
Confidence            67899999998887644 33345566677765       1111       122222222222334455678899999999


Q ss_pred             HHcccCCCCCCCCHHHHHH
Q 045682          281 FECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.++|.+||++.++++
T Consensus       813 lrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  813 LRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHcCCCcccCccHHHhcc
Confidence            9999999999999999874

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=2.4e-32  Score=241.77  Aligned_cols=220  Identities=18%  Similarity=0.189  Sum_probs=167.9

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHH-HHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIV-YASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+  ++..||+|.+....   ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999998  67899999986532   122344555554 67788999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC-
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-  216 (309)
                      |+|..++.       ....+++..+..++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||++...... 
T Consensus        81 ~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~  150 (321)
T cd05603          81 GELFFHLQ-------RERCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE  150 (321)
T ss_pred             CCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC
Confidence            99999886       4567889999999999999999999   999999999999999999999999999998753221 


Q ss_pred             ---ccccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 ---ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 ---~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                         ....|...|.+|+..      ...+.|+++..++.++.+...      .++.+.+..+...  .+...+..+.+++.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~  228 (321)
T cd05603         151 ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQ--LPGGKTVAACDLLV  228 (321)
T ss_pred             CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHH
Confidence               123355555555532      235677777777777654332      2222333322222  12245677999999


Q ss_pred             HcccCCCCCCCCHH
Q 045682          282 ECVNESPVDRPTMV  295 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~  295 (309)
                      .||+.+|.+||++.
T Consensus       229 ~~l~~~p~~R~~~~  242 (321)
T cd05603         229 GLLHKDQRRRLGAK  242 (321)
T ss_pred             HHccCCHhhcCCCC
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-32  Score=240.35  Aligned_cols=233  Identities=14%  Similarity=0.119  Sum_probs=177.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||++..  +++.||+|.+...   .......+.+|+.++..++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            3688889999999999999998  6899999998642   2234456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++..      ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        81 e~~~g~~L~~~l~~------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~  151 (331)
T cd05597          81 DYYVGGDLLTLLSK------FEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLR  151 (331)
T ss_pred             ecCCCCcHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceee
Confidence            99999999999862      2456899999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCCc-----cccccccccccccc-----------cCCCcccHHHHHHHHhhccccc------ccccccccCC--CCC-C
Q 045682          213 IPEGE-----LLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGD--RSC-S  267 (309)
Q Consensus       213 ~~~~~-----~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~--~~~-~  267 (309)
                      .....     ...|...|.+|+..           ...+.|+++..++.++.+....      +....+....  ... .
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~  231 (331)
T cd05597         152 LLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPP  231 (331)
T ss_pred             cCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCC
Confidence            54322     23455556555432           2347788888888886654321      1111121111  111 1


Q ss_pred             chHHHHHHHHHHHHHcccC--CCCCCCCHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNE--SPVDRPTMVDVAK  299 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~--~P~~RPt~~~l~~  299 (309)
                      .....+..+.+++.+|+..  +|..||++.++++
T Consensus       232 ~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~  265 (331)
T cd05597         232 DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD  265 (331)
T ss_pred             ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            1113567889999987754  3344789988874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=5.4e-32  Score=235.47  Aligned_cols=232  Identities=20%  Similarity=0.223  Sum_probs=174.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+..+.||+|+||.||+|.+  +++.|++|.+...  .....+.+.+|+++++.++|+||+++++++..++..+++||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3578888999999999999998  6789999988654  23345678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |++++.+..+..       ....+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.+||+|||++...
T Consensus        81 ~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~  150 (288)
T cd07833          81 YVERTLLELLEA-------SPGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARAL  150 (288)
T ss_pred             cCCCCHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeeccccc
Confidence            999877776654       3456899999999999999999999   899999999999999999999999999998776


Q ss_pred             CCCc-----cccccccccccccc-------cCCCcccHHHHHHHHhhcccccccc-------------------------
Q 045682          214 PEGE-----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEII-------------------------  256 (309)
Q Consensus       214 ~~~~-----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  256 (309)
                      ....     ...+...+.+++..       ...+.|+++..++.++.+.......                         
T Consensus       151 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd07833         151 RARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS  230 (288)
T ss_pred             CCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence            5432     12223333333322       2345666776777666543211100                         


Q ss_pred             -cccccC-CCCCC---------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          257 -DPLIMG-DRSCS---------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       257 -~~~~~g-~~~~~---------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       +....+ ..+..         .+...+.++.+++++||+.+|++|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence             000001 00000         01123678999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=7.8e-32  Score=237.98  Aligned_cols=182  Identities=17%  Similarity=0.186  Sum_probs=137.5

Q ss_pred             cCceeecCCeEEEEEEe----CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceEEEEEecc
Q 045682           63 EKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPILVFEYIN  136 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e~~~  136 (309)
                      +..||+|+||.||+|..    +++.+|+|.+....  ....+.+|+.++++++||||+++++++..  +...+++|||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            46899999999999986    45789999986543  23457889999999999999999998854  456889999987


Q ss_pred             CCChhhhhhhhCCC--CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee----cCCCcEEEeecccc
Q 045682          137 CGSLADRIRIQHNP--QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF----NEENVAKLFDFSFS  210 (309)
Q Consensus       137 ~gsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~a  210 (309)
                      + +|.+++......  ......+++..+..++.||+.||.|||   +.+|+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            5 888887533211  112346899999999999999999999   9999999999999999    45678999999999


Q ss_pred             cccCCCc-------ccccccccccccccc-------CCCcccHHHHHHHHhhcc
Q 045682          211 ISIPEGE-------LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEED  250 (309)
Q Consensus       211 ~~~~~~~-------~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~  250 (309)
                      +......       ...|...|.+|+...       ..+.|+++..++.++.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~  213 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE  213 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCC
Confidence            7654321       223444455555322       235566666666665543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=7.1e-32  Score=242.01  Aligned_cols=233  Identities=16%  Similarity=0.186  Sum_probs=171.9

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----  125 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----  125 (309)
                      ...++|...+.||+|+||.||++..  .++.||+|.+...  .......+.+|+.+++.++||||+++++++...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            3457899999999999999999988  7899999998754  233446788999999999999999999988643     


Q ss_pred             -CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          126 -QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       126 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                       ...++||||+++ +|.+++.         ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~---------~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl  160 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQ---------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI  160 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHh---------hcCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEE
Confidence             347999999976 7777753         35889999999999999999999   999999999999999999999999


Q ss_pred             eecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccccc----------ccccc------
Q 045682          205 FDFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE----------IIDPL------  259 (309)
Q Consensus       205 ~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------~~~~~------  259 (309)
                      +|||+++......   ...|...+.+|+...      ..+.|+++..++.++.+.....          ++...      
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (355)
T cd07874         161 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE  240 (355)
T ss_pred             eeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            9999998654432   233455555555322      2355666666666654322110          00000      


Q ss_pred             ------------cc------C--------C--CCC--CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          260 ------------IM------G--------D--RSC--SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       260 ------------~~------g--------~--~~~--~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                                  ..      +        .  .+.  ......+.++.+|+.+||+.||++|||+.|+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                        00      0        0  000  0001124568899999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.4e-32  Score=263.04  Aligned_cols=241  Identities=19%  Similarity=0.192  Sum_probs=180.3

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeee--CCc
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQI  127 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~  127 (309)
                      ....++|.....||+|+||+||+|.+  ++..||+|.+...  .......|..|+.++.+++||||+++++++..  ...
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            34557899999999999999999999  6788999988654  23445678999999999999999999998865  356


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC----CCCeEeCCCCCCCeeecC-----
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF----PRPVIFRDFKLSNILFNE-----  198 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~----~~~iiH~dlkp~Nill~~-----  198 (309)
                      ++|||||+++|+|.++|....   .....+++..++.|+.||+.||.|||...    ..+||||||||+||||+.     
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~---~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l  165 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCY---KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI  165 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence            899999999999999986321   12357999999999999999999999321    145999999999999964     


Q ss_pred             ------------CCcEEEeecccccccCCCc---ccccccccccccccc--------CCCcccHHHHHHHHhhccccc--
Q 045682          199 ------------ENVAKLFDFSFSISIPEGE---LLTGLRAFDLARLNE--------DDGYVALRDHVKKYFEEDRLN--  253 (309)
Q Consensus       199 ------------~~~~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~--  253 (309)
                                  .+.+||+|||++.......   ...|...|.+|+...        ..+.|+++..++.++.+....  
T Consensus       166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~  245 (1021)
T PTZ00266        166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK  245 (1021)
T ss_pred             ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence                        2458999999998764332   334666666666431        235677777777766544322  


Q ss_pred             -----ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          254 -----EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       254 -----~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                           .++..+..+.  ..+....+.++.+||..||+.+|.+||++.+++.
T Consensus       246 ~~~~~qli~~lk~~p--~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        246 ANNFSQLISELKRGP--DLPIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             CCcHHHHHHHHhcCC--CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence                 1121111111  1111245678999999999999999999999983

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2e-31  Score=229.09  Aligned_cols=235  Identities=20%  Similarity=0.285  Sum_probs=181.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|+..+.||.|+||+||+|..  ++..+++|.+.... ......+.+|++.++.++|+||+++++.+..+...++|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4688899999999999999998  67899999986543 33567799999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++....    ....+++..+..++.|++.||+|||   +.+++|+||+|+||++++++.++|+|||++....
T Consensus        81 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~  153 (267)
T cd06610          81 LSGGSLLDIMKSSY----PRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLA  153 (267)
T ss_pred             cCCCcHHHHHHHhc----ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence            99999999986221    1356899999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCc--------ccccccccccccc-------ccCCCcccHHHHHHHHhhccccccc------ccccccCCCC-CCc---h
Q 045682          215 EGE--------LLTGLRAFDLARL-------NEDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRS-CSG---K  269 (309)
Q Consensus       215 ~~~--------~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~-~~~---~  269 (309)
                      ...        ...|...+..++.       ....+.|+++..++.++.+......      +.....+..+ ...   .
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (267)
T cd06610         154 DGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADY  233 (267)
T ss_pred             cCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCcccc
Confidence            332        1234444444432       2234677777777777665432211      1111111111 111   1


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...+..+.+++..||+.||++|||+.+|++
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         234 KKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             ccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            245678999999999999999999999975

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=6.6e-32  Score=234.60  Aligned_cols=232  Identities=16%  Similarity=0.153  Sum_probs=169.4

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||.|++|.||+|..  ++..||+|.+....  ......+.+|+.++++++||||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            477788999999999999998  78999999886542  22335788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +. ++|.+++..     .....+++..+..++.|++.||+|||   ..+++|+||+|+||+++.++.+||+|||++....
T Consensus        81 ~~-~~l~~~~~~-----~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860          81 LH-QDLKKFMDA-----SPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  151 (284)
T ss_pred             cc-cCHHHHHHh-----CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence            96 589988752     13467899999999999999999999   8999999999999999999999999999987653


Q ss_pred             CCcc----cccccccccccccc-------CCCcccHHHHHHHHhhccccccc------cccccc--C-------------
Q 045682          215 EGEL----LTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEI------IDPLIM--G-------------  262 (309)
Q Consensus       215 ~~~~----~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--g-------------  262 (309)
                      ....    ..+...+.+++...       ..+.|+++..++.++.+......      ......  +             
T Consensus       152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07860         152 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSL  231 (284)
T ss_pred             cCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence            2211    11222233343221       23455566555555544321100      000000  0             


Q ss_pred             -----CCC---CCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 -----DRS---CSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 -----~~~---~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                           ..+   ...    ....+.++.+++.+||+.||.+|||+.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence                 000   000    0123466889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-32  Score=231.95  Aligned_cols=238  Identities=18%  Similarity=0.207  Sum_probs=180.3

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCC-----
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQ-----  126 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~-----  126 (309)
                      .++++|+..+.||+|+||.||+|..  +++.+++|.+..... ....+.+|+.+++++ +|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            3568899999999999999999998  678899999876543 346789999999999 7999999999997654     


Q ss_pred             -ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          127 -IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       127 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                       ..++||||+++++|.+++....   .....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~  155 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLR---KKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLV  155 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEEC
Confidence             3899999999999999986321   12467899999999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCCc----ccccccccccccc-----------ccCCCcccHHHHHHHHhhcccccc------cccccccCCC
Q 045682          206 DFSFSISIPEGE----LLTGLRAFDLARL-----------NEDDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDR  264 (309)
Q Consensus       206 Dfg~a~~~~~~~----~~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~  264 (309)
                      |||++.......    ...|...+.+|+.           ....+.|+++..++.++.+.....      .+.....+..
T Consensus       156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  235 (275)
T cd06608         156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP  235 (275)
T ss_pred             CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC
Confidence            999987543321    1223333443432           123467777777777765443211      1111112211


Q ss_pred             CC-CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 SC-SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 ~~-~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +. ..+...+.++.+|+.+||..||++|||+.+|++
T Consensus       236 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         236 PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            11 122235678999999999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.6e-31  Score=235.13  Aligned_cols=231  Identities=20%  Similarity=0.300  Sum_probs=181.1

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      |+..+.||+|+||.||+|..  ++..+++|.+...   .......+.+|+.+++.++|+|++++++++......++||||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            66667899999999999998  6788999988643   223345688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +. |++.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        97 ~~-~~l~~~~~~------~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  166 (308)
T cd06634          97 CL-GSASDLLEV------HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (308)
T ss_pred             cC-CCHHHHHHH------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence            97 588887641      2456899999999999999999999   8999999999999999999999999999998776


Q ss_pred             CCcccccccccccccc---------ccCCCcccHHHHHHHHhhcccccc------cccccccCCCCCCchHHHHHHHHHH
Q 045682          215 EGELLTGLRAFDLARL---------NEDDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       215 ~~~~~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ......|...+.+|+.         ....+.|+++..++.++.+.....      .......+..+.......+..+.+|
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (308)
T cd06634         167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF  246 (308)
T ss_pred             CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHH
Confidence            6555555555544443         123477888888888766553221      1112222333333334667889999


Q ss_pred             HHHcccCCCCCCCCHHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      +.+||+.+|++||++.+++..
T Consensus       247 i~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         247 VDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHHHhhCCcccCCCHHHHhhC
Confidence            999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.98  E-value=6.9e-32  Score=240.55  Aligned_cols=233  Identities=19%  Similarity=0.221  Sum_probs=187.5

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch---hHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR---MYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~  129 (309)
                      ....|+..+.||.|.||.||+++.  +|+.+|+|.+......   ....+.+|+.+|+++. |||||.+++++.+....+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            445688889999999999999999  7999999999776432   3467999999999997 999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC----CcEEEe
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE----NVAKLF  205 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~----~~~kl~  205 (309)
                      +|||++.||.|.+.+.       .. .+++..+..++.|++.|+.|||   +.+++||||||+|+|+...    +.+|++
T Consensus       113 lvmEL~~GGeLfd~i~-------~~-~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~  181 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIV-------KK-HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLI  181 (382)
T ss_pred             EEEEecCCchHHHHHH-------Hc-cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEe
Confidence            9999999999999986       11 3999999999999999999999   9999999999999999533    479999


Q ss_pred             ecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCC--c
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCS--G  268 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~--~  268 (309)
                      |||+|......+   ...|...|.+|+...      ..+.|+++...+.++.+.+.      .+....+..|...+.  .
T Consensus       182 DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~  261 (382)
T KOG0032|consen  182 DFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEP  261 (382)
T ss_pred             eCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCC
Confidence            999999987743   456776676666543      22455555555555444322      233335555554332  3


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      -...+..+.+++..|+..||..|+|+.++++
T Consensus       262 w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  262 WDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             ccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            3466889999999999999999999999986

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.98  E-value=3e-31  Score=226.53  Aligned_cols=231  Identities=19%  Similarity=0.254  Sum_probs=182.0

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--hhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--RMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~  132 (309)
                      +|...+.||+|++|.||+|..  ++..|++|.+.....  ...+.+.+|+.++++++||||+++++.+...  ...++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            367788999999999999999  589999999876542  4567899999999999999999999999988  8899999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++.       ....+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||.+..
T Consensus        81 e~~~~~~L~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~  150 (260)
T cd06606          81 EYVSGGSLSSLLK-------KFGKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKR  150 (260)
T ss_pred             EecCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence            9999999999986       3448999999999999999999999   89999999999999999999999999999887


Q ss_pred             cCCCc------cccccccccccccc------cCCCcccHHHHHHHHhhccccccc-------ccccccCCCCCCchHHHH
Q 045682          213 IPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEI-------IDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       213 ~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~  273 (309)
                      .....      ...+...+..++..      ...+.|+++..++.++.+......       +.....+......+...+
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (260)
T cd06606         151 LGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLS  230 (260)
T ss_pred             cccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccC
Confidence            65543      23344444444432      234667777777776654322111       111111122222334557


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.+++.+||+.+|++||++.+++.
T Consensus       231 ~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         231 EEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            88999999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.98  E-value=1.2e-31  Score=233.98  Aligned_cols=229  Identities=17%  Similarity=0.219  Sum_probs=180.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||++.+  +++.||+|.+....   ......+.+|++++++++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            3578889999999999999998  67999999986532   234567889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++..
T Consensus        81 e~~~~~~L~~~~~-------~~~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~  150 (290)
T cd05580          81 EYVPGGELFSHLR-------KSGRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKR  150 (290)
T ss_pred             ecCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccc
Confidence            9999999999986       4567899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc-cccccccccccccc------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHH
Q 045682          213 IPEGE-LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       213 ~~~~~-~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..... ...|...+.+++..      ...+.|+++..++.++.+....      +.......+..+  .+...+..+.++
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l  228 (290)
T cd05580         151 VKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVR--FPSFFSPDAKDL  228 (290)
T ss_pred             cCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcc--CCccCCHHHHHH
Confidence            65432 22344444444432      2346777777777776654321      112222222222  222446789999


Q ss_pred             HHHcccCCCCCCC-----CHHHHH
Q 045682          280 IFECVNESPVDRP-----TMVDVA  298 (309)
Q Consensus       280 i~~Cl~~~P~~RP-----t~~~l~  298 (309)
                      +.+||+.+|.+||     ++.+++
T Consensus       229 i~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         229 IRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             HHHHccCCHHHccCcccCCHHHHH
Confidence            9999999999999     667665

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.98  E-value=6.3e-32  Score=231.50  Aligned_cols=229  Identities=15%  Similarity=0.150  Sum_probs=179.2

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +|+..+.||.|+||.||+|.+  ++..||+|.+....   ....+.+.+|+.++++++||||+++++++.++...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            477788999999999999999  58999999987542   2345789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+.+++|.+++.       ...++++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++...
T Consensus        81 ~~~~~~L~~~l~-------~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~  150 (258)
T cd05578          81 LLLGGDLRYHLS-------QKVKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKV  150 (258)
T ss_pred             CCCCCCHHHHHH-------hcCCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeeccccccc
Confidence            999999999986       3457899999999999999999999   899999999999999999999999999998876


Q ss_pred             CCCc---ccccccccccccc------ccCCCcccHHHHHHHHhhccccccccc--------ccccCCCCCCchHHHHHHH
Q 045682          214 PEGE---LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNEIID--------PLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       214 ~~~~---~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....   ...|...+..|+.      ....+.|+++..++.++.+.......+        ..... .....+...+..+
T Consensus       151 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  229 (258)
T cd05578         151 TPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEA  229 (258)
T ss_pred             CCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHH
Confidence            5432   2223333333332      234577888888887765543221111        11110 1122233556889


Q ss_pred             HHHHHHcccCCCCCCCCH--HHHH
Q 045682          277 AHLIFECVNESPVDRPTM--VDVA  298 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~--~~l~  298 (309)
                      .+++.+||+.+|.+||++  .+++
T Consensus       230 ~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         230 IDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHHHHccCChhHcCCccHHHHh
Confidence            999999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.98  E-value=4.7e-32  Score=235.52  Aligned_cols=231  Identities=14%  Similarity=0.133  Sum_probs=169.1

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||+|+||.||+|.+  +|..||+|.+....  ......+.+|+.++++++||||+++++++.+....++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            367778899999999999999  78999999986532  22335678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++ +|.+++..      ....+++..+..++.||+.||.|||   +.+++|+||||+||+++.++.+||+|||++....
T Consensus        81 ~~~-~l~~~~~~------~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          81 CDQ-DLKKYFDS------CNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFG  150 (284)
T ss_pred             CCC-CHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence            975 88887641      2456899999999999999999999   8999999999999999999999999999987653


Q ss_pred             CCc----ccccccccccccccc-------CCCcccHHHHHHHHhhccccc-------ccc--------------------
Q 045682          215 EGE----LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLN-------EII--------------------  256 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-------~~~--------------------  256 (309)
                      ...    ...+...+.+|+...       ..+.|+++..++.++.+....       +.+                    
T Consensus       151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07839         151 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK  230 (284)
T ss_pred             CCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhh
Confidence            321    112223344444321       234555565556555432210       000                    


Q ss_pred             --cccccCCCCCC-----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          257 --DPLIMGDRSCS-----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       257 --~~~~~g~~~~~-----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                        +.......+..     .....+.++.+++.+||+.||.+|||+.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence              00000000000     00124577899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.98  E-value=1.2e-31  Score=240.60  Aligned_cols=176  Identities=16%  Similarity=0.163  Sum_probs=142.2

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ...+|...+.||+|+||.||+|..  ++..||+|.....      ....|+.++++++||||+++++++......++|+|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            346799999999999999999999  6678999975433      23568999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      ++. ++|.+++..      ....+++..+..++.||+.||.|||   ..+|+||||||+|||++.++.+||+|||++...
T Consensus       138 ~~~-~~l~~~l~~------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        138 HYS-SDLYTYLTK------RSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             ccC-CcHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence            996 588888751      3467899999999999999999999   899999999999999999999999999998753


Q ss_pred             CCCc---ccccccccccccccc------CCCcccHHHHHHHHh
Q 045682          214 PEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYF  247 (309)
Q Consensus       214 ~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~  247 (309)
                      ....   ...|...+.+|+...      ..+.|+++..+++++
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell  250 (357)
T PHA03209        208 VVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML  250 (357)
T ss_pred             ccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence            3221   234555555555432      235566666666654

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.98  E-value=4.4e-32  Score=243.83  Aligned_cols=146  Identities=16%  Similarity=0.180  Sum_probs=131.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||++..  +++.||+|.+...   .......+..|+.++..++||||+++++.+.+++..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3688889999999999999998  6899999998653   2234466888999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        81 E~~~gg~L~~~l~-------~~~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~  150 (360)
T cd05627          81 EFLPGGDMMTLLM-------KKDTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTG  150 (360)
T ss_pred             eCCCCccHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcc
Confidence            9999999999986       4567999999999999999999999   99999999999999999999999999999875


Q ss_pred             c
Q 045682          213 I  213 (309)
Q Consensus       213 ~  213 (309)
                      .
T Consensus       151 ~  151 (360)
T cd05627         151 L  151 (360)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.98  E-value=2.7e-31  Score=231.71  Aligned_cols=233  Identities=15%  Similarity=0.111  Sum_probs=171.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +++|...+.||+|+||.||+|..  ++..|++|.+.... ......+.+|+.++..++|+||+++++++..+...++|+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            46788899999999999999987  78999999986543 2233467899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+. ++|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+++..
T Consensus        84 ~~~-~~l~~~~~~------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870          84 YMH-TDLAQYMIQ------HPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             ccc-CCHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEecccccccc
Confidence            996 577777641      2346788889999999999999999   899999999999999999999999999998754


Q ss_pred             CCCc----ccccccccccccccc-------CCCcccHHHHHHHHhhcccccccccc------------------------
Q 045682          214 PEGE----LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIIDP------------------------  258 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------  258 (309)
                      ....    ...+...+.+++...       ..+.|+++..++.++.+....+..+.                        
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (291)
T cd07870         154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS  233 (291)
T ss_pred             CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence            2211    112233333444321       23566666666766655432211110                        


Q ss_pred             --------cccCCCCCCch-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 --------LIMGDRSCSGK-----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 --------~~~g~~~~~~~-----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                              ......+....     ...+..+.+++.+|+..||++|||+.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence                    00000000000     011457889999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.98  E-value=4.3e-31  Score=224.61  Aligned_cols=232  Identities=19%  Similarity=0.296  Sum_probs=180.7

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      +|+..+.||+|++|.||++..  ++..+++|++..........+.+|+.++..++|+|++++++++..+...++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            367788999999999999999  588999999877654566789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +++|.+++..      ....+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~L~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          81 GGSLKDLLKS------TNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CCcHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            9999999861      1257999999999999999999999   899999999999999999999999999998877554


Q ss_pred             c---ccccccccccccc------ccCCCcccHHHHHHHHhhcccccccc------cccccCCCCC-CchHHHHHHHHHHH
Q 045682          217 E---LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNEII------DPLIMGDRSC-SGKEQQLQAYAHLI  280 (309)
Q Consensus       217 ~---~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~-~~~~~~~~~l~~li  280 (309)
                      .   ...+...+..++.      ....+.|+++..++.++.+.......      ........+. ......+..+.+++
T Consensus       152 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  231 (253)
T cd05122         152 KARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFL  231 (253)
T ss_pred             ccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHH
Confidence            2   3334444433332      22346677777777766554321111      1111111111 11112267899999


Q ss_pred             HHcccCCCCCCCCHHHHHH
Q 045682          281 FECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+||+.||++|||+.++++
T Consensus       232 ~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         232 KKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHccCChhhCCCHHHHhc
Confidence            9999999999999999874

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.98  E-value=2.2e-31  Score=235.04  Aligned_cols=182  Identities=17%  Similarity=0.191  Sum_probs=137.2

Q ss_pred             cCceeecCCeEEEEEEe----CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceEEEEEecc
Q 045682           63 EKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPILVFEYIN  136 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e~~~  136 (309)
                      +..||+|+||.||+|..    ++..||+|.+....  ....+.+|+.+++.++||||+++++++..  +...++|+||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            45799999999999997    34789999986543  23467899999999999999999998854  557889999987


Q ss_pred             CCChhhhhhhhCC--CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee----cCCCcEEEeecccc
Q 045682          137 CGSLADRIRIQHN--PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF----NEENVAKLFDFSFS  210 (309)
Q Consensus       137 ~gsL~~~l~~~~~--~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~a  210 (309)
                      + +|.+++..+..  .......+++..+..++.|++.||.|||   +.+++||||||+|||+    +.++.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            5 88888753321  1122346899999999999999999999   8999999999999999    56679999999999


Q ss_pred             cccCCCc-------cccccccccccccccC-------CCcccHHHHHHHHhhcc
Q 045682          211 ISIPEGE-------LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEED  250 (309)
Q Consensus       211 ~~~~~~~-------~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~  250 (309)
                      +......       ...|...+.+|+....       .+.|+++..++.++.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~  213 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE  213 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCC
Confidence            8654321       1234444555553322       35566666666665543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.98  E-value=1.3e-31  Score=233.60  Aligned_cols=232  Identities=16%  Similarity=0.156  Sum_probs=169.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|+..+.||+|++|.||+|..  +++.||+|.+.... ......+.+|+.+++.++||||+++++++.++...++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            5688889999999999999998  67999999986543 22234577899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++ +|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||+++...
T Consensus        85 ~~~-~L~~~~~~------~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  154 (291)
T cd07844          85 LDT-DLKQYMDD------CGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKS  154 (291)
T ss_pred             CCC-CHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccC
Confidence            985 99998751      2347899999999999999999999   8999999999999999999999999999986542


Q ss_pred             CCc----cccccccccccccc-------cCCCcccHHHHHHHHhhccccccccc----------ccc----cC-------
Q 045682          215 EGE----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEIID----------PLI----MG-------  262 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~----~g-------  262 (309)
                      ...    ...+...+.+|+..       ...+.|+++..++.++.+.....-.+          ..+    ..       
T Consensus       155 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (291)
T cd07844         155 VPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSS  234 (291)
T ss_pred             CCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhh
Confidence            211    01122222233321       12356666666666654432211000          000    00       


Q ss_pred             -------CCCC---Cc------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 -------DRSC---SG------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 -------~~~~---~~------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                             ..+.   ..      .......+.+++..||+.+|++|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                   0000   00      0011266789999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.98  E-value=6.4e-32  Score=231.73  Aligned_cols=226  Identities=18%  Similarity=0.177  Sum_probs=173.5

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ||.|+||.||++.+  +++.+++|.+.....   .....+.+|+.++..++||||+++++.+..+...++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            68999999999999  589999999866532   3456789999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc---
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE---  217 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---  217 (309)
                      .+++.       ....+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.......   
T Consensus        81 ~~~l~-------~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  150 (265)
T cd05579          81 ASLLE-------NVGSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQIN  150 (265)
T ss_pred             HHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccc
Confidence            99986       3457899999999999999999999   9999999999999999999999999999987653321   


Q ss_pred             ---------ccccccccccccc------ccCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHH
Q 045682          218 ---------LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       218 ---------~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                               ...+...+..++.      ....+.++++..++.++.+...      .+.......+..+++.....+..+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (265)
T cd05579         151 LNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEA  230 (265)
T ss_pred             cccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHH
Confidence                     1223333333332      2234667777777777654332      122222333333322221236889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      .+++.+||+.+|.+|||+..+.+.|
T Consensus       231 ~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         231 IDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             HHHHHHHhcCCHhhcCCCccHHHHh
Confidence            9999999999999999995555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.98  E-value=7.7e-32  Score=247.72  Aligned_cols=227  Identities=14%  Similarity=0.130  Sum_probs=169.3

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ..+|.....||+|+||.||+|.+  .++.||+|...      ...+.+|+.++++++|+||+++++++..++..++|||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            34688889999999999999999  67889999632      23467899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +. ++|.+++..      ....+++.+++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       242 ~~-~~L~~~l~~------~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~  311 (461)
T PHA03211        242 YR-SDLYTYLGA------RLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFAR  311 (461)
T ss_pred             cC-CCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence            96 689888751      2347999999999999999999999   9999999999999999999999999999997653


Q ss_pred             CCc------ccccccccccccccc------CCCcccHHHHHHHHhhccc-c-------------cccccccccC-----C
Q 045682          215 EGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDR-L-------------NEIIDPLIMG-----D  263 (309)
Q Consensus       215 ~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~g-----~  263 (309)
                      ...      ...|...|.+++...      ..+.|+++..+|+++.+.. +             .++...+..+     .
T Consensus       312 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~  391 (461)
T PHA03211        312 GSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE  391 (461)
T ss_pred             cccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence            321      234566666555432      2355666666666532110 0             0000000000     0


Q ss_pred             CCCC---------------------c------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 RSCS---------------------G------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 ~~~~---------------------~------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+..                     .      .......+.+|+..||+.||.+|||+.|+++
T Consensus       392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~  454 (461)
T PHA03211        392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR  454 (461)
T ss_pred             CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence            0000                     0      0012346889999999999999999999985

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.98  E-value=1.2e-31  Score=238.27  Aligned_cols=233  Identities=14%  Similarity=0.125  Sum_probs=177.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||++..  +++.||+|.+...   .......+.+|..++..++|+||+++++++.+++..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688889999999999999998  6788999998652   2233455888999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++..      ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        81 Ey~~gg~L~~~l~~------~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~  151 (331)
T cd05624          81 DYYVGGDLLTLLSK------FEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLK  151 (331)
T ss_pred             eCCCCCcHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceee
Confidence            99999999999862      1356899999999999999999999   99999999999999999999999999999976


Q ss_pred             cCCCc-----cccccccccccccc-----------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCC---
Q 045682          213 IPEGE-----LLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCS---  267 (309)
Q Consensus       213 ~~~~~-----~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~---  267 (309)
                      .....     ...|...|.+++..           ...+.|+++..++.++.+....      +....+........   
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~  231 (331)
T cd05624         152 MNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPS  231 (331)
T ss_pred             ccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCC
Confidence            64332     23455556555532           2347788888888776654322      11222222111111   


Q ss_pred             chHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVD--RPTMVDVAK  299 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~--RPt~~~l~~  299 (309)
                      .....+.++.+++.+|+...+.+  |+++.++++
T Consensus       232 ~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         232 HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            11234678999999999865544  467777764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.98  E-value=1.6e-31  Score=233.32  Aligned_cols=232  Identities=15%  Similarity=0.161  Sum_probs=171.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv  131 (309)
                      ++|+..+.||.|+||.||+|.+  ++..+++|.+....  ......+.+|+.++.+++||||+++++++...  ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            4688888999999999999999  67899999986543  22334577899999999999999999999877  889999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++ +|.+++..      ....+++..++.++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||++.
T Consensus        85 ~e~~~~-~L~~~~~~------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~  154 (293)
T cd07843          85 MEYVEH-DLKSLMET------MKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAR  154 (293)
T ss_pred             ehhcCc-CHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCcee
Confidence            999985 99998752      2336899999999999999999999   8999999999999999999999999999988


Q ss_pred             ccCCCc----cccccccccccccc-------cCCCcccHHHHHHHHhhcccccccc------cc----------------
Q 045682          212 SIPEGE----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEII------DP----------------  258 (309)
Q Consensus       212 ~~~~~~----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~----------------  258 (309)
                      ......    ...+...+.+|+..       ...+.|+++..++.++.+.......      ..                
T Consensus       155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (293)
T cd07843         155 EYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGF  234 (293)
T ss_pred             eccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHh
Confidence            764431    12223334444422       1235566666666665543221100      00                


Q ss_pred             -----cccCCC--------CCCchHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 -----LIMGDR--------SCSGKEQ-QLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 -----~~~g~~--------~~~~~~~-~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                           ......        ....+.. .+..+.+++++||+.+|++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         235 SELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                 000000        0000001 3567899999999999999999999974

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=2e-31  Score=235.32  Aligned_cols=234  Identities=15%  Similarity=0.168  Sum_probs=176.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|..  ++..+|+|.+.....   ...+.+.+|++++..++||||+++++.+..+...++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            3578888999999999999998  579999999876532   24467889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+.+++|.+++...     ....+++..+..++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||++..
T Consensus        81 e~~~~~~L~~~~~~~-----~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~  152 (316)
T cd05574          81 DYCPGGELFRLLQRQ-----PGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQ  152 (316)
T ss_pred             EecCCCCHHHHHHhC-----CCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhc
Confidence            999999999998621     3457899999999999999999999   99999999999999999999999999999875


Q ss_pred             cCCCc---------------------------------cccccccccccccc------cCCCcccHHHHHHHHhhccccc
Q 045682          213 IPEGE---------------------------------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN  253 (309)
Q Consensus       213 ~~~~~---------------------------------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      .....                                 ...|...|.+++..      ...+.|+++..++.++.+....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf  232 (316)
T cd05574         153 SDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPF  232 (316)
T ss_pred             ccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCC
Confidence            53221                                 01122233333322      1235566666666665544321


Q ss_pred             c------cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 045682          254 E------IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPT----MVDVAK  299 (309)
Q Consensus       254 ~------~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt----~~~l~~  299 (309)
                      .      .+................+..+.+++.+||+.+|++|||    +.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         233 KGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             CCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            1      111111122222222235788999999999999999999    666654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.98  E-value=6.4e-31  Score=228.96  Aligned_cols=236  Identities=17%  Similarity=0.181  Sum_probs=175.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~  132 (309)
                      ++|+..+.||.|++|.||+|.+  +++.+|+|.+.... ......+.+|+++++.++||||+++++++..  .+..++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            3577788999999999999999  67999999987543 2345678999999999999999999999865  34689999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++....   .....+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++..
T Consensus        81 e~~~~~~L~~~l~~~~---~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~  154 (287)
T cd06621          81 EYCEGGSLDSIYKKVK---KRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGE  154 (287)
T ss_pred             EecCCCCHHHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccccc
Confidence            9999999999875321   13456889999999999999999999   99999999999999999999999999999865


Q ss_pred             cCCCc--ccccccccccccc------ccCCCcccHHHHHHHHhhcccccccc-----------cccccCCCCC-----Cc
Q 045682          213 IPEGE--LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNEII-----------DPLIMGDRSC-----SG  268 (309)
Q Consensus       213 ~~~~~--~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~-----~~  268 (309)
                      .....  ...+...+..++.      ....+.|+++..++.++.+.......           ........+.     ..
T Consensus       155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd06621         155 LVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN  234 (287)
T ss_pred             ccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC
Confidence            43221  1222223333322      12345677777777776554221111           1111101000     00


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ....++.+.+++.+||+.+|++|||+.+|++
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            1134678999999999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.98  E-value=2.7e-31  Score=239.09  Aligned_cols=231  Identities=15%  Similarity=0.164  Sum_probs=170.8

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC------
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET------  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------  125 (309)
                      ..++|...+.||+|+||.||+|..  .++.||||++...  .......+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            457799999999999999999998  7889999998753  234456788999999999999999999987543      


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ...++||||+++ +|.+++.         ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~  168 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ---------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKIL  168 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH---------hcCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEE
Confidence            357999999975 7777764         34788999999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------ccccccc--C------
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLIM--G------  262 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--g------  262 (309)
                      |||+++......   ...|...|.+|+...      ..+.|+++..++.++.+.....      .+...+.  +      
T Consensus       169 DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  248 (364)
T cd07875         169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF  248 (364)
T ss_pred             eCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence            999998664432   223444555554322      2355666666666654432110      0000000  0      


Q ss_pred             -------------CC-----------------CC--CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 -------------DR-----------------SC--SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 -------------~~-----------------~~--~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                   ..                 +.  ........++.+|+.+||+.||.+|||+.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                         00                 00  000012356889999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=4.6e-31  Score=225.14  Aligned_cols=230  Identities=21%  Similarity=0.320  Sum_probs=178.9

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||+|++|.||++..  +++.|++|.+.....  .....+.+|++++.+++|||++++++++.+++..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            367788999999999999988  678999999877643  4557799999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        81 ~~~~~L~~~~~-------~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  150 (254)
T cd06627          81 AENGSLRQIIK-------KFGPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLN  150 (254)
T ss_pred             CCCCcHHHHHH-------hccCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecC
Confidence            99999999986       4467999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCcc----cccccccccccc------ccCCCcccHHHHHHHHhhccccccc------ccccccCCCCCCchHHHHHHHHH
Q 045682          215 EGEL----LTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       215 ~~~~----~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ....    ..+...+..++.      ....+.+.++..++.++.+.....-      .........+ ..+...+..+.+
T Consensus       151 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  229 (254)
T cd06627         151 DVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHP-PLPEGISPELKD  229 (254)
T ss_pred             CCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCC-CCCCCCCHHHHH
Confidence            4332    223333333332      1234566677777766654322111      1011111111 122345678999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+||+.+|++|||+.+++.
T Consensus       230 ~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         230 FLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHhCChhhCcCHHHHhc
Confidence            999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=1.6e-31  Score=229.22  Aligned_cols=228  Identities=18%  Similarity=0.140  Sum_probs=168.9

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHHH-hhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVYA-SQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~l-~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|..  +++.||+|.+.....   .....+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999998  778999999865431   1223344454444 445899999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      ++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus        82 ~~L~~~l~-------~~~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  151 (260)
T cd05611          82 GDCASLIK-------TLGGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENK  151 (260)
T ss_pred             CCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccccc
Confidence            99999986       4457899999999999999999999   8999999999999999999999999999988765444


Q ss_pred             ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCC--CchHHHHHHHHHHHHHc
Q 045682          218 LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSC--SGKEQQLQAYAHLIFEC  283 (309)
Q Consensus       218 ~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~--~~~~~~~~~l~~li~~C  283 (309)
                      ...|...+..++...      ..+.|+++..++.++.+...      .+.......+...+  .....++.++.+++..|
T Consensus       152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  231 (260)
T cd05611         152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRL  231 (260)
T ss_pred             cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHH
Confidence            444555554444322      23566666666666544322      11222222222111  11224568899999999


Q ss_pred             ccCCCCCCCCHHHHHHHH
Q 045682          284 VNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       284 l~~~P~~RPt~~~l~~~L  301 (309)
                      |+.+|++||++.++.+.|
T Consensus       232 l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         232 LCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             ccCCHHHccCCCcHHHHH
Confidence            999999999876555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.97  E-value=3.7e-31  Score=230.26  Aligned_cols=229  Identities=17%  Similarity=0.207  Sum_probs=177.1

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      |...+.||+|++|.||++..  ++..+++|.+........+.+.+|+.++..++||||+++++++...+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            45557899999999999987  6789999998765545556789999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      ++|.+++.       . ..+++..+..++.|++.||+|||   +.+++||||+|+||+++.++.++|+|||++.......
T Consensus       101 ~~L~~~~~-------~-~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~  169 (285)
T cd06648         101 GALTDIVT-------H-TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV  169 (285)
T ss_pred             CCHHHHHH-------h-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence            99999985       2 56899999999999999999999   9999999999999999999999999999876543321


Q ss_pred             ----ccccccccccccc------ccCCCcccHHHHHHHHhhccccc------ccccccccCCCCCC-chHHHHHHHHHHH
Q 045682          218 ----LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCS-GKEQQLQAYAHLI  280 (309)
Q Consensus       218 ----~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~-~~~~~~~~l~~li  280 (309)
                          ...|...+..++.      ....+.|+++..++.++.+....      +.+.....+..+.. .+...+..+.+++
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  249 (285)
T cd06648         170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFL  249 (285)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHH
Confidence                1223333333332      22346777887888776654321      11111111211111 1123557899999


Q ss_pred             HHcccCCCCCCCCHHHHHH
Q 045682          281 FECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+||+.+|++|||+.++++
T Consensus       250 ~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         250 DRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHcccChhhCcCHHHHcc
Confidence            9999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=4.3e-34  Score=230.05  Aligned_cols=232  Identities=19%  Similarity=0.255  Sum_probs=183.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++.|+..+.||+|.|+.||++.+  +|+.+|+|.+...  .....+.+.+|+.|-+.|+||||++|...+.+.+..|||+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            45677888999999999999998  8899999987654  2345678899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEEeeccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKLFDFSF  209 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~  209 (309)
                      |++.|++|..-+-       .....++..+..++.||+.||+|||   .++|||||+||+|+|+.+   ..-+||+|||+
T Consensus        90 e~m~G~dl~~eIV-------~R~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGv  159 (355)
T KOG0033|consen   90 DLVTGGELFEDIV-------AREFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGL  159 (355)
T ss_pred             ecccchHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccce
Confidence            9999999877664       3466788899999999999999999   999999999999999953   34589999999


Q ss_pred             ccccCCCccccc---cccccccccccCCC------cccHHHHHHHH------hhcccccccccccccCCCCCCch--HHH
Q 045682          210 SISIPEGELLTG---LRAFDLARLNEDDG------YVALRDHVKKY------FEEDRLNEIIDPLIMGDRSCSGK--EQQ  272 (309)
Q Consensus       210 a~~~~~~~~~~g---~~~~~~~~~~~~~~------~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~--~~~  272 (309)
                      |..+..+..+.|   .+.|.+|+......      .|.-+....-+      |.+.....+...+..|.+..+++  ...
T Consensus       160 Ai~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~i  239 (355)
T KOG0033|consen  160 AIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTV  239 (355)
T ss_pred             EEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcC
Confidence            999887776654   45555565543322      22222222222      33334455677777776654432  366


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      +++.++|+++||..||.+|.|+.|.+
T Consensus       240 s~~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  240 TPEAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             CHHHHHHHHHHhccChhhhccHHHHh
Confidence            78899999999999999999998875

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=2.9e-31  Score=235.94  Aligned_cols=234  Identities=14%  Similarity=0.115  Sum_probs=178.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||++.+  +++.+|+|.+...   .......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            3688889999999999999998  6788999998542   1223345888999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++..      ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        81 ey~~~g~L~~~l~~------~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~  151 (332)
T cd05623          81 DYYVGGDLLTLLSK------FEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLK  151 (332)
T ss_pred             eccCCCcHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchhee
Confidence            99999999999862      2356899999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCCc-----cccccccccccccc-----------cCCCcccHHHHHHHHhhccccc------ccccccccCCCC--CC-
Q 045682          213 IPEGE-----LLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRS--CS-  267 (309)
Q Consensus       213 ~~~~~-----~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~--~~-  267 (309)
                      .....     ...|...|.+++..           ...+.|+++..+++++.+....      +....+......  .+ 
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~  231 (332)
T cd05623         152 LMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPA  231 (332)
T ss_pred             cccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCC
Confidence            53321     23455556555532           2457888888888887654322      122222222111  11 


Q ss_pred             chHHHHHHHHHHHHHcccCCCC--CCCCHHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPV--DRPTMVDVAKK  300 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~--~RPt~~~l~~~  300 (309)
                      .....+.++.+|+.+|+..+|.  .||++.++++.
T Consensus       232 ~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         232 QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            1124567899999998865443  47899888753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.97  E-value=5.6e-31  Score=226.12  Aligned_cols=224  Identities=17%  Similarity=0.206  Sum_probs=173.9

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ||.|+||.||+|..  ++..+++|.+....   ....+.+.+|+.+++.++||||+++++++.++...++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            69999999999999  48999999986542   23446799999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc---
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE---  217 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---  217 (309)
                      .+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.......   
T Consensus        81 ~~~l~-------~~~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~  150 (262)
T cd05572          81 WTILR-------DRGLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTW  150 (262)
T ss_pred             HHHHh-------hcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccc
Confidence            99986       4456899999999999999999999   9999999999999999999999999999998765432   


Q ss_pred             ccccccccccccc------ccCCCcccHHHHHHHHhhcccccc--------cccccccCCCCCCchHHHHHHHHHHHHHc
Q 045682          218 LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNE--------IIDPLIMGDRSCSGKEQQLQAYAHLIFEC  283 (309)
Q Consensus       218 ~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~l~~li~~C  283 (309)
                      ...|...+..++.      ....+.|+++..++.++.+.....        .......+......+...+.++.+++.+|
T Consensus       151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  230 (262)
T cd05572         151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQL  230 (262)
T ss_pred             cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHH
Confidence            2233333444432      223466777777777765443221        12222222222222234468899999999


Q ss_pred             ccCCCCCCCC-----HHHHHH
Q 045682          284 VNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       284 l~~~P~~RPt-----~~~l~~  299 (309)
                      |+.+|++||+     +.|+++
T Consensus       231 l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         231 LRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             ccCChhhCcCCcccCHHHHhc
Confidence            9999999999     666654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.97  E-value=2.1e-31  Score=227.81  Aligned_cols=232  Identities=19%  Similarity=0.252  Sum_probs=176.2

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||.|+||.||+|..  ++..+|+|.+....  ....+.+.+|+.+++.++|+||+++++.+..++..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            467788999999999999999  67899999986542  23446788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeeccccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSISI  213 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~  213 (309)
                      +++++|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++ .+||+|||++...
T Consensus        81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~  152 (257)
T cd08225          81 CDGGDLMKRINRQ-----RGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL  152 (257)
T ss_pred             CCCCcHHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence            9999999998521     2345899999999999999999999   89999999999999998885 5699999998766


Q ss_pred             CCCc----cccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHH
Q 045682          214 PEGE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ....    ...|...+.+++..      ...+.|+++..++.++.+...      .+.+.....+..+... ...+.++.
T Consensus       153 ~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  231 (257)
T cd08225         153 NDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPIS-PNFSRDLR  231 (257)
T ss_pred             cCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCC-CCCCHHHH
Confidence            4432    11233334444322      234566677666666544322      1111122222222211 24457899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +++.+||+.+|++|||+.+|+.
T Consensus       232 ~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         232 SLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHHhccChhhCcCHHHHhh
Confidence            9999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=7.6e-31  Score=231.39  Aligned_cols=230  Identities=20%  Similarity=0.296  Sum_probs=177.1

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      |...+.||+|+||.||+|..  ++..|++|.+....   ......+.+|+.++..++|||++++++++.++...++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            55567799999999999998  78899999986532   23345688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +. |++.+++..      ...++++.++..++.|++.|+.|||   +.+++|+||+|+||+++.++.+||+|||++....
T Consensus       103 ~~-~~l~~~l~~------~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~  172 (313)
T cd06633         103 CL-GSASDLLEV------HKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS  172 (313)
T ss_pred             CC-CCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccC
Confidence            97 478887641      3456899999999999999999999   8999999999999999999999999999987665


Q ss_pred             CCcccccccccccccccc---------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHH
Q 045682          215 EGELLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       215 ~~~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ......|...|.+|+...         ..+.|+++..++.++.+....      ..+.....+..+.......+..+.++
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  252 (313)
T cd06633         173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGF  252 (313)
T ss_pred             CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHH
Confidence            555555655565555421         235667777777765544321      11111111222222223455679999


Q ss_pred             HHHcccCCCCCCCCHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+||+.+|.+||++.+++.
T Consensus       253 i~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         253 VDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             HHHHccCChhhCcCHHHHhc
Confidence            99999999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.3e-31  Score=243.27  Aligned_cols=227  Identities=19%  Similarity=0.140  Sum_probs=171.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe----CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ..+|...+.||+|+||.||++..    .+..||+|.+...     ....+|+.++++++||||+++++++......+++|
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            45699999999999999999976    3478999987654     23568999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |++. ++|.+++.       ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.++|+|||++..
T Consensus       166 e~~~-~~l~~~l~-------~~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~  234 (392)
T PHA03207        166 PKYK-CDLFTYVD-------RSGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACK  234 (392)
T ss_pred             hhcC-CCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccc
Confidence            9996 58998885       4567999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCCc------ccccccccccccccc------CCCcccHHHHHHHHhhcccccc-------------cccc---------
Q 045682          213 IPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE-------------IIDP---------  258 (309)
Q Consensus       213 ~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~---------  258 (309)
                      .....      ...|...+.+++...      ..+.|+++..++.++.+.....             ++..         
T Consensus       235 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~  314 (392)
T PHA03207        235 LDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP  314 (392)
T ss_pred             cCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence            54322      234555555555432      2466777777776654321110             0000         


Q ss_pred             -------------cccCCC-CCCch-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 -------------LIMGDR-SCSGK-----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 -------------~~~g~~-~~~~~-----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                   ...... +...+     ...+.++.+++..||..||++|||+.+++.
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~  374 (392)
T PHA03207        315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS  374 (392)
T ss_pred             CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence                         000000 00000     122456888999999999999999999975

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=5.4e-31  Score=229.31  Aligned_cols=232  Identities=16%  Similarity=0.191  Sum_probs=167.4

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhc---cCCcceeeeeeeee-----CC
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQM---IHRCFFKLIGCCLE-----TQ  126 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~-----~~  126 (309)
                      +|+..+.||+|+||.||+|..  +++.||+|.+....  ......+.+|+.+++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            477788999999999999998  78999999986532  22234566777777665   79999999998864     23


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..+++|||+++ +|.+++...     ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~d  151 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKV-----PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLAD  151 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECc
Confidence            57899999985 898887521     2345899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc---cccccccccccccc------cCCCcccHHHHHHHHhhcccccc----------ccccc--------
Q 045682          207 FSFSISIPEGE---LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE----------IIDPL--------  259 (309)
Q Consensus       207 fg~a~~~~~~~---~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--------  259 (309)
                      ||++.......   ...|...+.+|+..      ...+.|+++..++.++.+.....          +....        
T Consensus       152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~  231 (288)
T cd07863         152 FGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW  231 (288)
T ss_pred             cCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence            99997654322   12334444444432      23467777777777654432210          00000        


Q ss_pred             ---c---cCCC---CCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 ---I---MGDR---SCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ---~---~g~~---~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                         .   ....   ....    ....+..+.+++.+||+.||++|||+.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence               0   0000   0000    0123567889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=8e-31  Score=231.15  Aligned_cols=229  Identities=16%  Similarity=0.170  Sum_probs=168.3

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ++.+|.|+++.|+++..++..||+|++...  .....+.+.+|+.+++.++||||+++++++......+++|||+++|+|
T Consensus         7 ~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216           7 GKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             hHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence            344566667677777668999999998764  344557899999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc---
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE---  217 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---  217 (309)
                      .+++...     ....+++..+..++.|++.||+|||   +.+|+|+||||+||+++.++.+||+|||.+.......   
T Consensus        87 ~~~l~~~-----~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~  158 (314)
T cd08216          87 EDLLKTH-----FPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ  158 (314)
T ss_pred             HHHHHHh-----cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccc
Confidence            9998632     2346889999999999999999999   9999999999999999999999999999886543221   


Q ss_pred             --------cccccccccccccc--------cCCCcccHHHHHHHHhhccccccccc------ccccC-------------
Q 045682          218 --------LLTGLRAFDLARLN--------EDDGYVALRDHVKKYFEEDRLNEIID------PLIMG-------------  262 (309)
Q Consensus       218 --------~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g-------------  262 (309)
                              ...+..++.+++..        ...+.|+++..+|+++.+.......+      ....+             
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (314)
T cd08216         159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL  238 (314)
T ss_pred             cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence                    11222233334321        23466777777777754432211000      00000             


Q ss_pred             -------------------CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 -------------------DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 -------------------~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                         ..+.......+.++.+++.+||+.||++|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence                               0001111234567899999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.97  E-value=9.4e-31  Score=232.26  Aligned_cols=227  Identities=14%  Similarity=0.141  Sum_probs=169.1

Q ss_pred             ceeec--CCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           65 VIMKR--SFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        65 ~lg~G--~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      .||.|  +||+||.+.+  +++.||+|.+....  ....+.+.+|+.+++.++||||+++++++..++..++|+||++++
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            46666  9999999998  88999999987543  334567889999999999999999999999999999999999999


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC--
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG--  216 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--  216 (309)
                      +|.+++...     ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.++++||+.+......  
T Consensus        85 ~l~~~l~~~-----~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~  156 (328)
T cd08226          85 SANSLLKTY-----FPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ  156 (328)
T ss_pred             CHHHHHHhh-----cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence            999998632     2345899999999999999999999   999999999999999999999999999854332111  


Q ss_pred             ---------cccccccccccccccc--------CCCcccHHHHHHHHhhccccccccc------cccc------------
Q 045682          217 ---------ELLTGLRAFDLARLNE--------DDGYVALRDHVKKYFEEDRLNEIID------PLIM------------  261 (309)
Q Consensus       217 ---------~~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~------------  261 (309)
                               ....+..++..++...        ..+.|+++..++.++.+.......+      ....            
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (328)
T cd08226         157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTF  236 (328)
T ss_pred             cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccccc
Confidence                     1122333455554322        2366777777777665433211100      0000            


Q ss_pred             ---------------------------------CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 ---------------------------------GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 ---------------------------------g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                                       ..........++..+.+|+.+||+.||++|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                                             00011112346678999999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=4.7e-31  Score=230.50  Aligned_cols=236  Identities=13%  Similarity=0.114  Sum_probs=168.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCc-----
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQI-----  127 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~-----  127 (309)
                      ++|+..+.||+|+||.||+|.+  +++.||+|.+....  ......+.+|+.++..+ +||||+++++++.....     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3688889999999999999998  78999999876543  22345688999999999 57999999999987665     


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-CCcEEEee
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLFD  206 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~~~~kl~D  206 (309)
                      .++||||+++ +|.+++.....  .....+++..++.++.||+.||.|||   +.+++|+||+|+||+++. ++.+||+|
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~d  154 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGR--GPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIAD  154 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEee
Confidence            8999999986 89988753211  12356899999999999999999999   999999999999999998 88999999


Q ss_pred             cccccccCCCc----cccccccccccccc-------cCCCcccHHHHHHHHhhccccccc----------cccccc----
Q 045682          207 FSFSISIPEGE----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEI----------IDPLIM----  261 (309)
Q Consensus       207 fg~a~~~~~~~----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~----  261 (309)
                      ||++.......    ...+...+.+++..       ...+.|+++..++.++.+.....-          +.....    
T Consensus       155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (295)
T cd07837         155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ  234 (295)
T ss_pred             cccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            99987543211    11122223333321       123556666666665544321100          000000    


Q ss_pred             -----------CCCC---CCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 -----------GDRS---CSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 -----------g~~~---~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                 ...+   ...    ....+.++.+++.+||++||.+|||+.+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence                       0000   000    0134577999999999999999999999874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.97  E-value=3.6e-31  Score=230.52  Aligned_cols=236  Identities=16%  Similarity=0.168  Sum_probs=173.5

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|...+.||+|+||.||++.+  +++.+|+|.+.... ......+.+|+.++.++. ||||+++++++..++..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            355567899999999999998  77999999987543 234467889999999995 99999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +.. ++.++.....  ......+++..+..++.|++.||+|||+  ..+++||||||+||+++.++.+||+|||++....
T Consensus        85 ~~~-~l~~l~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          85 MDI-SLDKFYKYVY--EVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             ccC-CHHHHHHHHH--HhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            875 6655432110  0124678999999999999999999993  3599999999999999999999999999987653


Q ss_pred             CCc---cccccccccccccc---------cCCCcccHHHHHHHHhhccccc-------ccccccccCCCCCC---chHHH
Q 045682          215 EGE---LLTGLRAFDLARLN---------EDDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSCS---GKEQQ  272 (309)
Q Consensus       215 ~~~---~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~---~~~~~  272 (309)
                      ...   ...|..++.+|+..         ...+.|+++..++.++.+....       +.+.....+..+..   .....
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd06616         160 DSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREF  239 (288)
T ss_pred             cCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCcc
Confidence            321   22344555555432         2345677777777776554321       11111122222111   11236


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+|+.+||+.+|++|||+.+|+.
T Consensus       240 ~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         240 SPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            678999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=2.9e-32  Score=244.91  Aligned_cols=228  Identities=16%  Similarity=0.262  Sum_probs=181.8

Q ss_pred             cCceeecCCeEEEEEEe--CCeEEEEEEecC----CCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc--eEEEEEe
Q 045682           63 EKVIMKRSFYTLYKGFC--QERLISVMKFDA----SKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI--PILVFEY  134 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~--~~lv~e~  134 (309)
                      ..+||+|+|-+||+|.+  +|-.||.=.++.    .++....+|.+|+++|+.|+||||+++|.++.+...  ..+|+|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            45799999999999999  676676543322    234556889999999999999999999999987554  8899999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec-CCCcEEEeeccccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN-EENVAKLFDFSFSISI  213 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~~  213 (309)
                      +..|+|..|++       ..+.++...+..|++||++||.|||++ ..+|||||||-.||+|+ ..|.|||+|.|||...
T Consensus       125 ~TSGtLr~Y~k-------k~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~  196 (632)
T KOG0584|consen  125 FTSGTLREYRK-------KHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL  196 (632)
T ss_pred             ccCCcHHHHHH-------HhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence            99999999998       567788899999999999999999987 78999999999999997 4589999999999876


Q ss_pred             CCC--ccccccccccccccccC-----CCcccHHHHHHHHhh-------cccccccccccccCCCCCCchHHHHHHHHHH
Q 045682          214 PEG--ELLTGLRAFDLARLNED-----DGYVALRDHVKKYFE-------EDRLNEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       214 ~~~--~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ...  ....|.+-|.+|+..+.     -+.++++.++.++..       .....++...+..|..|.....-..++++++
T Consensus       197 r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~f  276 (632)
T KOG0584|consen  197 RKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREF  276 (632)
T ss_pred             hccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHH
Confidence            443  34679999999887652     134555555555522       2334556667777766543333335889999


Q ss_pred             HHHcccCCCCCCCCHHHHHH
Q 045682          280 IFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~  299 (309)
                      |..|+.. .++|||+.|++.
T Consensus       277 IekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  277 IEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHhcC-chhccCHHHHhh
Confidence            9999999 999999999974

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.97  E-value=2.9e-31  Score=236.36  Aligned_cols=232  Identities=14%  Similarity=0.124  Sum_probs=170.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----Cce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----QIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  128 (309)
                      +++|+..+.||+|+||.||+|.+  ++..||+|.+... .......+.+|+.++++++||||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46799999999999999999998  7899999998653 233456688999999999999999999987654     357


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++|+||+.+ +|.+++.        ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||
T Consensus        84 ~lv~e~~~~-~l~~~~~--------~~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg  151 (336)
T cd07849          84 YIVQELMET-DLYKLIK--------TQHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFG  151 (336)
T ss_pred             EEEehhccc-CHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECccc
Confidence            999999975 8888764        457999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCcc-------cccccccccccccc-------CCCcccHHHHHHHHhhcccccccc------------------
Q 045682          209 FSISIPEGEL-------LTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEII------------------  256 (309)
Q Consensus       209 ~a~~~~~~~~-------~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------------------  256 (309)
                      ++........       ..|...+.+++...       ..+.|+++..++.++.+.......                  
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~  231 (336)
T cd07849         152 LARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQ  231 (336)
T ss_pred             ceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            9876543221       12333344444321       234555665566555443221000                  


Q ss_pred             ---ccccc-------CCCCC--C-c----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          257 ---DPLIM-------GDRSC--S-G----KEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       257 ---~~~~~-------g~~~~--~-~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                         +....       ...+.  . .    ....+.++.+++.+||+.+|++|||+.++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence               00000       00000  0 0    01235678999999999999999999999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=9.2e-31  Score=227.28  Aligned_cols=231  Identities=15%  Similarity=0.129  Sum_probs=169.4

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      |+..+.||.|++|.||+|.+  ++..|++|++....  ......+.+|+.+++.++|||++++++++.+++..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            56678899999999999998  78999999986543  233466889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      + ++|.+++...     ....+++..++.++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~-~~l~~~~~~~-----~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~  151 (283)
T cd07835          81 D-LDLKKYMDSS-----PLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGV  151 (283)
T ss_pred             C-cCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCC
Confidence            6 5999998521     2246899999999999999999999   89999999999999999999999999999875532


Q ss_pred             Cc----cccccccccccccc-------cCCCcccHHHHHHHHhhcccccccc----------c-----------------
Q 045682          216 GE----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEII----------D-----------------  257 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~----------~-----------------  257 (309)
                      ..    ...+...+.+|+..       ...+.|+++..++.++.+.......          +                 
T Consensus       152 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd07835         152 PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP  231 (283)
T ss_pred             CccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence            21    01112223333321       1234566666666665543221100          0                 


Q ss_pred             ----ccccCCCCC--CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 ----PLIMGDRSC--SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 ----~~~~g~~~~--~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                          .........  ......+..+.+++.+||+.+|.+|||+.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                000000000  001123467889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=1.1e-30  Score=226.61  Aligned_cols=229  Identities=16%  Similarity=0.123  Sum_probs=166.0

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeC--CceEEEEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLET--QIPILVFE  133 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~--~~~~lv~e  133 (309)
                      |...+.||+|+||.||+|..  ++..||+|.+.... ........+|+.++.++ +||||+++++++.+.  +..++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            45567899999999999998  78999999986542 22223456788889988 599999999999887  88999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++ +|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++. +.+||+|||++...
T Consensus        81 ~~~~-~l~~~l~~------~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~  149 (282)
T cd07831          81 LMDM-NLYELIKG------RKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGI  149 (282)
T ss_pred             cCCc-cHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEeccccccc
Confidence            9974 88888751      2357899999999999999999999   899999999999999999 99999999999765


Q ss_pred             CCCc---cccccccccccccc-------cCCCcccHHHHHHHHhhcccccc------ccccc------------------
Q 045682          214 PEGE---LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNE------IIDPL------------------  259 (309)
Q Consensus       214 ~~~~---~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~------------------  259 (309)
                      ....   ...+...+.+++..       ...+.|+++..++.++.+.....      .+...                  
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (282)
T cd07831         150 YSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKS  229 (282)
T ss_pred             ccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccc
Confidence            4322   12233334444422       12355556655555554321110      00000                  


Q ss_pred             ccCCCCCC---------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 IMGDRSCS---------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ~~g~~~~~---------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .......+         .....+..+.+++.+||+++|++|||+.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            00000000         01134688999999999999999999999975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=1e-30  Score=223.23  Aligned_cols=234  Identities=21%  Similarity=0.276  Sum_probs=180.7

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||.|+||.||++.+  ++..+++|++.....  .....+.+|+++++.++|||++++.+.+......++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            467788999999999999999  589999999876532  4556789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++....   .....+++..+..++.+++.||+|||   +.+++|+||+|+||+++.++.++|+|||++....
T Consensus        81 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  154 (258)
T cd08215          81 ADGGDLSQKIKKQK---KEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLS  154 (258)
T ss_pred             cCCCcHHHHHHHhh---ccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecc
Confidence            99999999986321   12467999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCc----ccccccccccccc------ccCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ...    ...|...+..++.      ....+.|+++..++.++.+....      ++......+..+. .+...+.++.+
T Consensus       155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  233 (258)
T cd08215         155 STVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPP-IPSQYSSELRN  233 (258)
T ss_pred             cCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCC-CCCCCCHHHHH
Confidence            432    1222222333331      22346677777777776543221      1222222222221 22255678999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+||+.+|++|||+.++++
T Consensus       234 ~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         234 LVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=9.6e-31  Score=227.20  Aligned_cols=233  Identities=15%  Similarity=0.134  Sum_probs=170.0

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +|+..+.||.|++|.||+|+.  ++..||+|.+.... ......+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            477888999999999999999  68999999987653 233466788999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++ +|.+++....    ....+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++.....
T Consensus        81 ~~-~l~~~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~  152 (284)
T cd07836          81 DK-DLKKYMDTHG----VRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI  152 (284)
T ss_pred             Cc-cHHHHHHhcC----CCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence            85 8988875221    2346899999999999999999999   89999999999999999999999999999875432


Q ss_pred             Cc----ccccccccccccccc-------CCCcccHHHHHHHHhhccccccccc------c--------------------
Q 045682          216 GE----LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIID------P--------------------  258 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~--------------------  258 (309)
                      ..    ...+...+..++...       ..+.|+++..++.++.+.....-.+      .                    
T Consensus       153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T cd07836         153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP  232 (284)
T ss_pred             CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc
Confidence            21    111222233333221       2244555555555554432111000      0                    


Q ss_pred             cccCCCCCCc-------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 LIMGDRSCSG-------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ~~~g~~~~~~-------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ......+...       ....+..+.+++..||+.||.+||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0000111000       0123567889999999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-31  Score=232.77  Aligned_cols=238  Identities=20%  Similarity=0.244  Sum_probs=180.1

Q ss_pred             cCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhh--ccCCcceeeeeeeeeCC----ceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQ--MIHRCFFKLIGCCLETQ----IPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~g~~~~~~----~~~lv  131 (309)
                      ......++||+|.||.||+|.++++.||||++...   ....|.+|-.|...  +.|+||++++++-....    +++||
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            33455678999999999999999999999998664   34568888777665  48999999999876544    89999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc------CCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHV------GFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~------~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      +||.+.|||.+||+        ...++|....+|+..+++||+|||+      +...+|+|||||..||||.+|+++.|+
T Consensus       287 t~fh~kGsL~dyL~--------~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa  358 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLK--------ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA  358 (534)
T ss_pred             eeeccCCcHHHHHH--------hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence            99999999999996        5689999999999999999999995      346689999999999999999999999


Q ss_pred             ecccccccCCCc------cccccccccccccccCC------------CcccHHHHHHHHhhcccccc------ccccc--
Q 045682          206 DFSFSISIPEGE------LLTGLRAFDLARLNEDD------------GYVALRDHVKKYFEEDRLNE------IIDPL--  259 (309)
Q Consensus       206 Dfg~a~~~~~~~------~~~g~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~------~~~~~--  259 (309)
                      |||+|..+..+.      --.|...|.+|+..++.            +.++++-..|+++.......      ..-+.  
T Consensus       359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~  438 (534)
T KOG3653|consen  359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA  438 (534)
T ss_pred             ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence            999998876543      23466666666654432            34455556677755433221      00000  


Q ss_pred             ccCCCC---------------CCchH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          260 IMGDRS---------------CSGKE-----QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       260 ~~g~~~---------------~~~~~-----~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ..|..|               +..+.     ..+.-+.+.+..||..||+.|.|+.=+.+++.++..
T Consensus       439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            011111               11111     124558899999999999999999999999887753

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=2.5e-31  Score=236.82  Aligned_cols=233  Identities=15%  Similarity=0.120  Sum_probs=173.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----Cc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----QI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~  127 (309)
                      ...|...+.||+|+||.||+|..  ++..||+|.+...  .......+.+|+.++..++||||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            35688889999999999999998  7899999998653  233445678899999999999999999988653     34


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++|+||+. ++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+||
T Consensus        84 ~~lv~e~~~-~~L~~~~~-------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Df  152 (337)
T cd07858          84 VYIVYELMD-TDLHQIIR-------SSQTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDF  152 (337)
T ss_pred             EEEEEeCCC-CCHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcC
Confidence            799999997 58999886       4567999999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCc----cccccccccccccc-------cCCCcccHHHHHHHHhhccccccccc-------------------
Q 045682          208 SFSISIPEGE----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEIID-------------------  257 (309)
Q Consensus       208 g~a~~~~~~~----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  257 (309)
                      |++.......    ...+...+.+++..       ...+.|+++..++.++.+.....-.+                   
T Consensus       153 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07858         153 GLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEED  232 (337)
T ss_pred             ccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence            9998764431    12233334334321       23466777767666654432211000                   


Q ss_pred             --cccc----------CCCCCC----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          258 --PLIM----------GDRSCS----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       258 --~~~~----------g~~~~~----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                        ....          ...+..    .....+.++.+++.+||+.+|++|||+.++++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         233 LGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             hhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence              0000          000000    001345778999999999999999999999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=6.8e-31  Score=230.23  Aligned_cols=234  Identities=18%  Similarity=0.166  Sum_probs=171.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-----
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-----  126 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----  126 (309)
                      ..++|+..+.||+|+||.||+|.+  +++.||+|.+....  ......+.+|+.+++.++||||+++++++.+..     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            456788899999999999999999  67899999986542  233356778999999999999999999987654     


Q ss_pred             -----ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc
Q 045682          127 -----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV  201 (309)
Q Consensus       127 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~  201 (309)
                           ..++|+||+++ ++.+++.      .....+++..+..++.|++.||+|||   +.+|+|+||+|+||++++++.
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~------~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~  154 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLE------SGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQ  154 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHh------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCc
Confidence                 78999999986 7777764      12456899999999999999999999   899999999999999999999


Q ss_pred             EEEeecccccccCCCcc-----ccccccccccccc-------cCCCcccHHHHHHHHhhcccccccc---------cccc
Q 045682          202 AKLFDFSFSISIPEGEL-----LTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEII---------DPLI  260 (309)
Q Consensus       202 ~kl~Dfg~a~~~~~~~~-----~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  260 (309)
                      +||+|||++........     ..+...+.+++..       ...+.|+++..++.++.+.......         ....
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~  234 (302)
T cd07864         155 IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLC  234 (302)
T ss_pred             EEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            99999999886643221     1122233333322       2235566666666665443211100         0000


Q ss_pred             cCCCC----C---------------------CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          261 MGDRS----C---------------------SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       261 ~g~~~----~---------------------~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+..+    .                     ......+..+.+++.+||+.+|.+|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00000    0                     000123577999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-30  Score=226.61  Aligned_cols=230  Identities=17%  Similarity=0.177  Sum_probs=169.7

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEEEEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPILVFE  133 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  133 (309)
                      |+..+.||.|+||.||+|..  ++..+|+|.+....  ......+.+|+.+++.++|||++++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            45677899999999999998  57999999997653  34456788999999999999999999999987  88999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++ +|.+++.      .....+++..++.++.|++.||+|||   ..+++|+||+|+||++++++.+||+|||++...
T Consensus        81 ~~~~-~l~~~~~------~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~  150 (287)
T cd07840          81 YMDH-DLTGLLD------SPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPY  150 (287)
T ss_pred             cccc-cHHHHHh------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeec
Confidence            9985 8988875      12257999999999999999999999   899999999999999999999999999998866


Q ss_pred             CCCc-----cccccccccccccc-------cCCCcccHHHHHHHHhhccccccccc------cccc-------CC-----
Q 045682          214 PEGE-----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEIID------PLIM-------GD-----  263 (309)
Q Consensus       214 ~~~~-----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-------g~-----  263 (309)
                      ....     ...+...+.+|+..       ...+.|+++..++.++.+....+..+      ....       ..     
T Consensus       151 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07840         151 TKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVS  230 (287)
T ss_pred             cCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccc
Confidence            4432     11122233333321       12345556666666554432211000      0000       00     


Q ss_pred             ---------CCCCc--------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 ---------RSCSG--------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 ---------~~~~~--------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                               .....        ...++..+.+++.+||+.+|.+||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                     00000        0012577899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=6.3e-31  Score=234.23  Aligned_cols=233  Identities=21%  Similarity=0.229  Sum_probs=172.5

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeC--Cce
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLET--QIP  128 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~--~~~  128 (309)
                      ..++|+..+.||+|+||.||+|.+  ++..+|+|++...  .......+.+|+.++.++ +||||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            346688888999999999999998  6789999988542  223345677899999999 999999999988653  368


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++ +|.+++.       . ..+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||
T Consensus        85 ~lv~e~~~~-~L~~~~~-------~-~~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g  152 (337)
T cd07852          85 YLVFEYMET-DLHAVIR-------A-NILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFG  152 (337)
T ss_pred             EEEeccccc-CHHHHHh-------c-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeecc
Confidence            999999984 9999875       2 37889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCc---------cccccccccccccc-------cCCCcccHHHHHHHHhhccccccc-----------------
Q 045682          209 FSISIPEGE---------LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEI-----------------  255 (309)
Q Consensus       209 ~a~~~~~~~---------~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----------------  255 (309)
                      ++.......         ...|...+.+++..       ...+.|+++..++.++.+......                 
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07852         153 LARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP  232 (337)
T ss_pred             chhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            987654322         12233344444422       234667777777766654322110                 


Q ss_pred             ----------------ccccccCCCCCC--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          256 ----------------IDPLIMGDRSCS--GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       256 ----------------~~~~~~g~~~~~--~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                                      ++..........  .....+.++.+++..||+.+|.+|||+.++++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence                            000000000000  001235778999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=2.6e-31  Score=236.41  Aligned_cols=231  Identities=14%  Similarity=0.172  Sum_probs=173.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee----CCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE----TQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~  129 (309)
                      .+|+..+.||+|+||.||+|..  ++..||+|++....  ......+.+|+.++..++||||+++++++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            6788889999999999999998  78999999987642  2345678889999999999999999998753    34689


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+. ++|.+++.       ....+++..+..++.|++.||+|||   ..+++|+||||+||+++.++.+||+|||+
T Consensus        85 lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~  153 (334)
T cd07855          85 VVMDLME-SDLHHIIH-------SDQPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGM  153 (334)
T ss_pred             EEEehhh-hhHHHHhc-------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEeccccc
Confidence            9999996 58999975       4566999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc--------ccccccccccccc-------ccCCCcccHHHHHHHHhhcccccccccc----------------
Q 045682          210 SISIPEGE--------LLTGLRAFDLARL-------NEDDGYVALRDHVKKYFEEDRLNEIIDP----------------  258 (309)
Q Consensus       210 a~~~~~~~--------~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------  258 (309)
                      +.......        ...|...+.+++.       ....+.|+++...+.++.+.......+.                
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~  233 (334)
T cd07855         154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE  233 (334)
T ss_pred             ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence            87653321        1123333333332       2235677777777776544332111000                


Q ss_pred             -----cc----------cCCCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 -----LI----------MGDRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 -----~~----------~g~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                           ..          ........    ....+.++.+++.+||+.+|.+|||+.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                 00          00000000    0134678999999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.97  E-value=1.3e-30  Score=229.74  Aligned_cols=234  Identities=17%  Similarity=0.181  Sum_probs=168.7

Q ss_pred             CCccCceeecCCeEEEEEEe----CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPIL  130 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  130 (309)
                      |+..+.||+|+||.||+|..    ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            66778899999999999998    36899999987733   34456788999999999999999999999987  78999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC----CCcEEEee
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE----ENVAKLFD  206 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~----~~~~kl~D  206 (309)
                      ||||+++ +|.+++..+..  .....+++..++.++.|++.||+|||   +.+++|+||||+||+++.    ++.+||+|
T Consensus        82 v~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~D  155 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQ--AKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGD  155 (316)
T ss_pred             EEeCCCc-CHHHHHHhhcc--CCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECC
Confidence            9999985 77777643221  12347899999999999999999999   999999999999999999    89999999


Q ss_pred             cccccccCCCc-------ccccccccccccccc-------CCCcccHHHHHHHHhhccccccccccc-------------
Q 045682          207 FSFSISIPEGE-------LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIIDPL-------------  259 (309)
Q Consensus       207 fg~a~~~~~~~-------~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  259 (309)
                      ||++.......       ...+...+.+|+...       ..+.|+++..++.++.+.......+..             
T Consensus       156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (316)
T cd07842         156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE  235 (316)
T ss_pred             CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence            99988653321       112233344444222       234555665555554433221100000             


Q ss_pred             ------------------------------ccCCCCCC-chH------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 ------------------------------IMGDRSCS-GKE------QQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ------------------------------~~g~~~~~-~~~------~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                                    .....+.. ...      ..+.++.+++.+||+.||++|||+.++++
T Consensus       236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                                          00000000 000      23356889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.97  E-value=1e-30  Score=226.87  Aligned_cols=224  Identities=14%  Similarity=0.171  Sum_probs=164.1

Q ss_pred             ceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhh---ccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           65 VIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQ---MIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~---l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      .||+|+||.||++..  +++.+|+|.+....   ......+.+|..++..   .+||||+.+++++..++..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999998  67999999886542   1222334455444433   479999999999999899999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+|||+++++.++|+|||++......
T Consensus        81 ~~~L~~~i~-------~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~  150 (279)
T cd05633          81 GGDLHYHLS-------QHGVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  150 (279)
T ss_pred             CCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc
Confidence            999999986       4567999999999999999999999   999999999999999999999999999998754322


Q ss_pred             c--ccccccccccccccc-------CCCcccHHHHHHHHhhccccccc--------ccccccCCCCCCchHHHHHHHHHH
Q 045682          217 E--LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEI--------IDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       217 ~--~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      .  ...|..++.+++...       ..+.|+++..++.++.+......        +..... ..+...+...+.++.++
T Consensus       151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l  229 (279)
T cd05633         151 KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-TVNVELPDSFSPELKSL  229 (279)
T ss_pred             CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh-cCCcCCccccCHHHHHH
Confidence            1  223555555555332       23555555555555544322111        111100 11112223566889999


Q ss_pred             HHHcccCCCCCCC-----CHHHHHH
Q 045682          280 IFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      +..||+.||.+||     |+.++++
T Consensus       230 i~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         230 LEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             HHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            9999999999999     5888865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=7.4e-31  Score=225.44  Aligned_cols=232  Identities=16%  Similarity=0.178  Sum_probs=177.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .+|...+.||.|.-|+||.+..  ++..+|+|.+.+..   .....+...|-+||+.++||.++.||+.+..+...+++|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            3466677899999999999999  45899999998753   334456788999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |||+||+|...++.     .....+++..+..++..|+-||+|||   -.|||+|||||+||||.++|++.|+||.|+..
T Consensus       157 eyCpGGdL~~Lrqk-----Qp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~  228 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQK-----QPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLR  228 (459)
T ss_pred             ecCCCccHHHHHhh-----CCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeecccccc
Confidence            99999999999863     36778999999999999999999999   99999999999999999999999999998754


Q ss_pred             cCCCc------------------------------------------------------------ccccccccccccccc
Q 045682          213 IPEGE------------------------------------------------------------LLTGLRAFDLARLNE  232 (309)
Q Consensus       213 ~~~~~------------------------------------------------------------~~~g~~~~~~~~~~~  232 (309)
                      .+-.-                                                            ...|..-|-+|+...
T Consensus       229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~  308 (459)
T KOG0610|consen  229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR  308 (459)
T ss_pred             CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence            42100                                                            011222222333322


Q ss_pred             CC------CcccHHHHHHHHhhc------ccccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCC----HHH
Q 045682          233 DD------GYVALRDHVKKYFEE------DRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPT----MVD  296 (309)
Q Consensus       233 ~~------~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt----~~~  296 (309)
                      +.      ++|.++..+++++.+      ..-.+.+..++.....++.....+..+.+||+..|.+||.+|..    +.|
T Consensus       309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e  388 (459)
T KOG0610|consen  309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE  388 (459)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence            22      345555555665433      33334444444444444444466788999999999999999987    555


Q ss_pred             H
Q 045682          297 V  297 (309)
Q Consensus       297 l  297 (309)
                      |
T Consensus       389 I  389 (459)
T KOG0610|consen  389 I  389 (459)
T ss_pred             h
Confidence            5

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=1.3e-30  Score=222.81  Aligned_cols=234  Identities=15%  Similarity=0.178  Sum_probs=179.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..+.||+|+||.||++..  ++..+++|.+....  ......+.+|+.+++.++|+||+++++++......++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            467788999999999999988  77899999986542  33456788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++....   .....+++..++.++.|++.||+|||   +.+++|+||+|.||+++.++.+||+|||++....
T Consensus        81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~  154 (256)
T cd08530          81 APFGDLSKAISKRK---KKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLK  154 (256)
T ss_pred             cCCCCHHHHHHHHH---hhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhc
Confidence            99999999986321   12467899999999999999999999   9999999999999999999999999999987765


Q ss_pred             CCcc--cccccccccccc------ccCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHHH
Q 045682          215 EGEL--LTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       215 ~~~~--~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li  280 (309)
                      ....  ..+...+..++.      ....+.|+++..++.++.+....      ++......+..+... ...+.++.+++
T Consensus       155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li  233 (256)
T cd08530         155 KNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP-PIYSQDLQNFI  233 (256)
T ss_pred             cCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc-hhhCHHHHHHH
Confidence            4311  112222222222      12345677777777765544321      122222333333322 36778899999


Q ss_pred             HHcccCCCCCCCCHHHHHH
Q 045682          281 FECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+||+.+|++|||+.++++
T Consensus       234 ~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         234 RSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHcCCCcccCCCHHHHhc
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-30  Score=225.45  Aligned_cols=230  Identities=17%  Similarity=0.161  Sum_probs=171.6

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      |+..+.||.|++|.||+|..  ++..+++|.+.....  .....+.+|+.+++.++|+||+++++++..+...++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            45667899999999999998  688999999876532  34567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++ +|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus        81 ~~-~l~~~l~~------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~  150 (283)
T cd05118          81 DT-DLYKLIKD------RQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGS  150 (283)
T ss_pred             CC-CHHHHHHh------hcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCC
Confidence            86 88888752      2357999999999999999999999   89999999999999999999999999999876654


Q ss_pred             Cc----ccccccccccccccc-------CCCcccHHHHHHHHhhccccccccc---------------------cccc--
Q 045682          216 GE----LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIID---------------------PLIM--  261 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~--  261 (309)
                      ..    ...+...+.+++...       ..+.|+++..++.++.+.......+                     ....  
T Consensus       151 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd05118         151 PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA  230 (283)
T ss_pred             CcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence            32    122333333343322       2345566666665555432110000                     0000  


Q ss_pred             --------CCCCCC---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 --------GDRSCS---GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 --------g~~~~~---~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                              ......   .....+.++.+++..||++||.+||++.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence                    000000   01235678999999999999999999999974

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=2.9e-30  Score=231.40  Aligned_cols=231  Identities=16%  Similarity=0.147  Sum_probs=171.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC------
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET------  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------  125 (309)
                      ..+.|+..+.||+|+||.||+|..  +++.||+|.+...  .......+.+|+.+++.++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            457799999999999999999998  7899999998643  233446788999999999999999999988643      


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ...++||||+.+ +|.+.+.       .  .+++..+..++.|++.||+|||   ..+++|+||||+||+++.++.+||+
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~-------~--~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~  160 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQ-------M--DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKIL  160 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHh-------h--cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEc
Confidence            347999999975 8888874       2  2889999999999999999999   8999999999999999999999999


Q ss_pred             ecccccccCCCcc---ccccccccccccc------cCCCcccHHHHHHHHhhccccccccc-------------------
Q 045682          206 DFSFSISIPEGEL---LTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEIID-------------------  257 (309)
Q Consensus       206 Dfg~a~~~~~~~~---~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  257 (309)
                      |||+++.......   ..+...+.+++..      ...+.|+++..++.++.+.......+                   
T Consensus       161 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  240 (353)
T cd07850         161 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF  240 (353)
T ss_pred             cCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence            9999987644322   2233334444432      22466777766666654432110000                   


Q ss_pred             -------------ccccC----------CC--CC---CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 -------------PLIMG----------DR--SC---SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 -------------~~~~g----------~~--~~---~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                   .....          ..  +.   ..+...+.++.+++.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                         00000          00  00   001134567899999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=1.2e-30  Score=242.22  Aligned_cols=236  Identities=13%  Similarity=0.181  Sum_probs=168.1

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccC------Ccceeeeeeee
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIH------RCFFKLIGCCL  123 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~g~~~  123 (309)
                      ++...+++|...+.||+|+||+||+|.+  +++.||||++.... .....+..|+.++..++|      .+++++++++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            3444567899999999999999999998  67899999986542 223445667777777654      45888888887


Q ss_pred             eC-CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeeecCCC-
Q 045682          124 ET-QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILFNEEN-  200 (309)
Q Consensus       124 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill~~~~-  200 (309)
                      .+ +..++|||++ +++|.+++.       ....+++..+..++.||+.||.|||   . .+||||||||+|||++.++ 
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~-------~~~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~  270 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIM-------KHGPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDT  270 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCc
Confidence            54 4688999987 568999886       4567999999999999999999999   6 5999999999999998765 


Q ss_pred             ---------------cEEEeecccccccCCC-ccccccccccccccccC------CCcccHHHHHHHHhhcccccccccc
Q 045682          201 ---------------VAKLFDFSFSISIPEG-ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIIDP  258 (309)
Q Consensus       201 ---------------~~kl~Dfg~a~~~~~~-~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  258 (309)
                                     .+||+|||++...... ....|...|.+|+....      .+.|+++..+++++.+.......+.
T Consensus       271 ~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~  350 (467)
T PTZ00284        271 VVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN  350 (467)
T ss_pred             ccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                           4999999987654322 23456666666665432      2556666666666554432210000


Q ss_pred             --------cccCCC------------------------CCCch--------------HHHHHHHHHHHHHcccCCCCCCC
Q 045682          259 --------LIMGDR------------------------SCSGK--------------EQQLQAYAHLIFECVNESPVDRP  292 (309)
Q Consensus       259 --------~~~g~~------------------------~~~~~--------------~~~~~~l~~li~~Cl~~~P~~RP  292 (309)
                              ...|..                        +...+              ......+.+|+..||+.||++||
T Consensus       351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~  430 (467)
T PTZ00284        351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL  430 (467)
T ss_pred             HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence                    000000                        00000              01134577999999999999999


Q ss_pred             CHHHHHH
Q 045682          293 TMVDVAK  299 (309)
Q Consensus       293 t~~~l~~  299 (309)
                      |+.|+++
T Consensus       431 ta~e~L~  437 (467)
T PTZ00284        431 NARQMTT  437 (467)
T ss_pred             CHHHHhc
Confidence            9999985

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=1e-30  Score=227.67  Aligned_cols=233  Identities=15%  Similarity=0.163  Sum_probs=176.1

Q ss_pred             CCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC----chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCce
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK----PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  128 (309)
                      +|+..+.||+|+||.||++..     ++..||+|.+....    ....+.+.+|+.++.++ +||||+++++.+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            366778899999999999985     45789999986432    23345688999999999 699999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|.+++.       ....+++..+..++.|+++||.|||   +.+++|+||+|+||+++.++.++|+|||
T Consensus        81 ~lv~e~~~~~~L~~~~~-------~~~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg  150 (288)
T cd05583          81 HLILDYVNGGELFTHLY-------QREHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFG  150 (288)
T ss_pred             EEEEecCCCCcHHHHHh-------hcCCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECc
Confidence            99999999999999985       3456899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCc-----cccccccccccccc--------cCCCcccHHHHHHHHhhccccc----------ccccccccCCCC
Q 045682          209 FSISIPEGE-----LLTGLRAFDLARLN--------EDDGYVALRDHVKKYFEEDRLN----------EIIDPLIMGDRS  265 (309)
Q Consensus       209 ~a~~~~~~~-----~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~  265 (309)
                      +++......     ...|...+..++..        ...+.|+++..++.++.+....          ++......... 
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-  229 (288)
T cd05583         151 LSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP-  229 (288)
T ss_pred             cccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC-
Confidence            987654322     12344444444422        2335666776667666543221          11111111111 


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                       ..+...+..+.+++.+||+.+|++|||+.++.+.|+.
T Consensus       230 -~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         230 -PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             -CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence             1222456789999999999999999999888766543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.97  E-value=1.9e-30  Score=226.62  Aligned_cols=226  Identities=18%  Similarity=0.205  Sum_probs=172.2

Q ss_pred             cCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           63 EKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ...||+|+||.||++..  ++..||+|.+..........+.+|+.+++.++|+||+++++++..++..++||||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            35699999999999988  7899999998765555566799999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc---
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE---  217 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---  217 (309)
                      .+++.        ...+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.......   
T Consensus       105 ~~~~~--------~~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~  173 (292)
T cd06657         105 TDIVT--------HTRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR  173 (292)
T ss_pred             HHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccccc
Confidence            99874        346899999999999999999999   8999999999999999999999999999887654321   


Q ss_pred             -cccccccccccccc------cCCCcccHHHHHHHHhhcccccc------cccccccCCC-CCCchHHHHHHHHHHHHHc
Q 045682          218 -LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDR-SCSGKEQQLQAYAHLIFEC  283 (309)
Q Consensus       218 -~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~-~~~~~~~~~~~l~~li~~C  283 (309)
                       ...|...|..++..      ...+.|+++..++.++.+.....      .+.....+.. ........+..+.+++.+|
T Consensus       174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  253 (292)
T cd06657         174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRL  253 (292)
T ss_pred             cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHH
Confidence             22333334444322      12356666666666665432211      0000000100 0111123456789999999


Q ss_pred             ccCCCCCCCCHHHHHH
Q 045682          284 VNESPVDRPTMVDVAK  299 (309)
Q Consensus       284 l~~~P~~RPt~~~l~~  299 (309)
                      |+.+|.+||++.++++
T Consensus       254 l~~~P~~R~~~~~ll~  269 (292)
T cd06657         254 LVRDPAQRATAAELLK  269 (292)
T ss_pred             HhCCcccCcCHHHHhc
Confidence            9999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=2.4e-30  Score=226.08  Aligned_cols=233  Identities=17%  Similarity=0.149  Sum_probs=167.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+..+.||+|++|.||+|..  +++.||+|.+....  ....+.+.+|+.++++++||||+++++++..+...++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            4688889999999999999998  67899999986542  2334668899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-CCcEEEeecccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLFDFSFSIS  212 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~  212 (309)
                      |++ ++|.+++...     ....+++..+..++.||+.||+|||   +.+++|+||+|+||+++. ++.+||+|||++..
T Consensus        82 ~~~-~~l~~~~~~~-----~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~  152 (294)
T PLN00009         82 YLD-LDLKKHMDSS-----PDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARA  152 (294)
T ss_pred             ccc-ccHHHHHHhC-----CCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccc
Confidence            996 4888887411     2334678888999999999999999   899999999999999985 56799999999976


Q ss_pred             cCCCc----ccccccccccccccc-------CCCcccHHHHHHHHhhccccccccc------cc-----------ccC--
Q 045682          213 IPEGE----LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIID------PL-----------IMG--  262 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----------~~g--  262 (309)
                      .....    ...+...+.+++...       ..+.|+++..++.++.+.......+      ..           ..+  
T Consensus       153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (294)
T PLN00009        153 FGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVT  232 (294)
T ss_pred             cCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccc
Confidence            53221    111222333333221       2345666666666655432211000      00           000  


Q ss_pred             ----------CCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 ----------DRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ----------~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                ..+...    ....+.++.+++.+||+.+|++||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence                      000000    0123466889999999999999999999985

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=1.8e-30  Score=228.22  Aligned_cols=232  Identities=16%  Similarity=0.187  Sum_probs=167.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-------
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-------  126 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-------  126 (309)
                      ++|+..+.||+|+||.||+|..  ++..||+|.+....  ......+.+|+.++++++||||+++++++....       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            5688899999999999999998  78999999886532  223345678999999999999999999987654       


Q ss_pred             -ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          127 -IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       127 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                       ..++||||+.+ +|.+++.      .....+++..++.++.|++.||+|||   +.+++|+||+|+||+++.++.+||+
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~------~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~  161 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLS------NKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLA  161 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHH------hcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEEC
Confidence             34999999975 8888875      12346899999999999999999999   8999999999999999999999999


Q ss_pred             ecccccccCCCc--------cccccccccccccc-------cCCCcccHHHHHHHHhhcccccccccc--------cccC
Q 045682          206 DFSFSISIPEGE--------LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEIIDP--------LIMG  262 (309)
Q Consensus       206 Dfg~a~~~~~~~--------~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g  262 (309)
                      |||++.......        ...+...+.+|+..       ...+.|+++..++.++.+......-+.        ...|
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~  241 (310)
T cd07865         162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG  241 (310)
T ss_pred             cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            999987653321        11222334444422       123566666666666543321100000        0000


Q ss_pred             CC-------------------CCCc---------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DR-------------------SCSG---------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~-------------------~~~~---------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..                   +...         +......+.+|+.+||+.||.+|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            00                   0000         0011345779999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.97  E-value=1.8e-30  Score=228.46  Aligned_cols=233  Identities=16%  Similarity=0.181  Sum_probs=169.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  130 (309)
                      .++|+..+.||+|+||.||+|.+  ++..||+|.+....  ......+.+|+.++.+++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            46788899999999999999998  68999999986542  22234567899999999999999999998764  46899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+.+ +|.+++..      ....+++.++..++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++
T Consensus        86 v~e~~~~-~l~~~l~~------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~  155 (309)
T cd07845          86 VMEYCEQ-DLASLLDN------MPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLA  155 (309)
T ss_pred             EEecCCC-CHHHHHHh------cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcccee
Confidence            9999975 88888752      2357899999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCc----cccccccccccccc-------cCCCcccHHHHHHHHhhcccccc------ccccccc------------
Q 045682          211 ISIPEGE----LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIM------------  261 (309)
Q Consensus       211 ~~~~~~~----~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~------------  261 (309)
                      .......    ...+...+.+++..       ...+.|+++..++.++.+.....      .+.....            
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (309)
T cd07845         156 RTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPG  235 (309)
T ss_pred             eecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchh
Confidence            8764321    11112223333322       12355666666666655432211      0000000            


Q ss_pred             -------CCC-----CCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 -------GDR-----SCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 -------g~~-----~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                             +..     +....    ...+.++.+++..||+.||++|||+.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                   000     00000    013567889999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.8e-30  Score=231.82  Aligned_cols=234  Identities=13%  Similarity=0.122  Sum_probs=169.7

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC---
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ---  126 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~---  126 (309)
                      ....++|+..+.||+|+||.||+|..  ++..||||++...  .......+.+|+.+++.++||||+++++++..+.   
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            34567799999999999999999988  7899999998653  2233456889999999999999999999987654   


Q ss_pred             ---ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEE
Q 045682          127 ---IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       127 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~k  203 (309)
                         ..++||||+ +++|.+++.        ...+++..+..++.|++.||.|||   ..+|+||||||+||+++.++.++
T Consensus        91 ~~~~~~lv~e~~-~~~l~~~~~--------~~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~k  158 (343)
T cd07880          91 RFHDFYLVMPFM-GTDLGKLMK--------HEKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELK  158 (343)
T ss_pred             ccceEEEEEecC-CCCHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEE
Confidence               358999998 669988874        356899999999999999999999   99999999999999999999999


Q ss_pred             EeecccccccCCCcc-cccccccccccccc-------CCCcccHHHHHHHHhhccccccccc------cccc--CC----
Q 045682          204 LFDFSFSISIPEGEL-LTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIID------PLIM--GD----  263 (309)
Q Consensus       204 l~Dfg~a~~~~~~~~-~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--g~----  263 (309)
                      |+|||++........ ..+...+.+++...       ..+.|+++..++.++.+.....-.+      ....  +.    
T Consensus       159 l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  238 (343)
T cd07880         159 ILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE  238 (343)
T ss_pred             EeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            999999986644321 22333333333221       2344555555555544332111000      0000  00    


Q ss_pred             ----------------CCCC-------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 ----------------RSCS-------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 ----------------~~~~-------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                      .+..       .....+..+.+++.+|++.||.+|||+.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             HHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                            0000       00123456889999999999999999999973

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=2.3e-30  Score=225.67  Aligned_cols=229  Identities=17%  Similarity=0.201  Sum_probs=175.4

Q ss_pred             CCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC----chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCce
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK----PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  128 (309)
                      +|+..+.||+|+||.||.+..     ++..||+|.+....    ....+.+.+|+.++.++ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            467788999999999999986     57889999986532    23346688999999999 699999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+|||++.++.+||+|||
T Consensus        81 ~lv~e~~~~~~L~~~l~-------~~~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg  150 (290)
T cd05613          81 HLILDYINGGELFTHLS-------QRERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFG  150 (290)
T ss_pred             EEEEecCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCc
Confidence            99999999999999986       4456889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCc-----cccccccccccccc--------cCCCcccHHHHHHHHhhccccc----------ccccccccCCCC
Q 045682          209 FSISIPEGE-----LLTGLRAFDLARLN--------EDDGYVALRDHVKKYFEEDRLN----------EIIDPLIMGDRS  265 (309)
Q Consensus       209 ~a~~~~~~~-----~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~  265 (309)
                      ++.......     ...|...+.+++..        ...+.|+++..++.++.+....          ++.+....+..+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~  230 (290)
T cd05613         151 LSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP  230 (290)
T ss_pred             cceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC
Confidence            987764432     22344445444432        2346677777777776554221          111222222211


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                        .+...+..+.+++.+||+.+|++||     ++.+++.
T Consensus       231 --~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         231 --YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             --CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence              1234567789999999999999997     6666653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.3e-30  Score=231.38  Aligned_cols=231  Identities=18%  Similarity=0.158  Sum_probs=172.7

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-----ceE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-----IPI  129 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~  129 (309)
                      +|...+.||.|+||.||+|..  ++..||+|.+....  ....+.+.+|+.+++.++||||+++++++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            477788999999999999998  57999999987643  344567899999999999999999999998765     789


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      ++|||+++ +|.+++.       ....+++..+..++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||+
T Consensus        81 lv~e~~~~-~l~~~l~-------~~~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~  149 (330)
T cd07834          81 IVTELMET-DLHKVIK-------SPQPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGL  149 (330)
T ss_pred             EEecchhh-hHHHHHh-------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCc
Confidence            99999985 8999886       4458999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc-------cccccccccccccc-------cCCCcccHHHHHHHHhhccccccccc------cccc--CC----
Q 045682          210 SISIPEGE-------LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEIID------PLIM--GD----  263 (309)
Q Consensus       210 a~~~~~~~-------~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--g~----  263 (309)
                      +.......       ...+...+.+++..       ...+.|+++..++.++.+.....-.+      .+..  +.    
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  229 (330)
T cd07834         150 ARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE  229 (330)
T ss_pred             eEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChh
Confidence            98765432       11223333333322       22355666666666654432210000      0000  00    


Q ss_pred             -------------------CCCC----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          264 -------------------RSCS----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       264 -------------------~~~~----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                                         ....    .....+..+.+++.+||+.+|++|||+.+++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                               0000    001235678999999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=1e-30  Score=226.27  Aligned_cols=230  Identities=19%  Similarity=0.187  Sum_probs=173.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...+.||.|+||.||+|..  ++..|++|.+....   ......+.+|+.++.+++ ||||+++++++..++..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            3678888999999999999998  78999999986532   233466889999999998 99999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.
T Consensus        81 ~e~~~~~~L~~~l~-------~~~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~  150 (280)
T cd05581          81 LEYAPNGELLQYIR-------KYGSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAK  150 (280)
T ss_pred             EcCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCcccc
Confidence            99999999999986       4457999999999999999999999   9999999999999999999999999999987


Q ss_pred             ccCCCcc------------------------cccccccccccc------ccCCCcccHHHHHHHHhhccccccc------
Q 045682          212 SIPEGEL------------------------LTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNEI------  255 (309)
Q Consensus       212 ~~~~~~~------------------------~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------  255 (309)
                      .......                        ..+...+.+++.      ....+.|+++..++.++.+......      
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  230 (280)
T cd05581         151 VLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT  230 (280)
T ss_pred             ccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence            6543221                        112222323321      1123455555555555544322111      


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTM----VDVAK  299 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~----~~l~~  299 (309)
                      +........  ..+...+..+.+++.+||+.+|.+|||+    .+++.
T Consensus       231 ~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         231 FQKILKLEY--SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHHhcCC--CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            111111111  1122446789999999999999999999    77653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=3.2e-30  Score=225.56  Aligned_cols=234  Identities=15%  Similarity=0.172  Sum_probs=173.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .++|+..+.||+|+||.||+|.+  +++.||||.+.... ......+..|+.++... .||||+++++++.++...+++|
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            35678889999999999999999  48999999987643 23345677788777777 5999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      ||+.+ ++.+++..      ....+++..+..++.|++.||+|||   + .+++|+||+|+||++++++.+||+|||++.
T Consensus        94 e~~~~-~l~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~  163 (296)
T cd06618          94 ELMST-CLDKLLKR------IQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISG  163 (296)
T ss_pred             eccCc-CHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccch
Confidence            99864 77777642      2347899999999999999999999   6 599999999999999999999999999987


Q ss_pred             ccCCCc---cccccccccccccc----------cCCCcccHHHHHHHHhhccccccc-------ccccccCCCCC-CchH
Q 045682          212 SIPEGE---LLTGLRAFDLARLN----------EDDGYVALRDHVKKYFEEDRLNEI-------IDPLIMGDRSC-SGKE  270 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~-~~~~  270 (309)
                      ......   ...+...+.+++..          ...+.|+++..++.++.+......       +.....+..+. ....
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (296)
T cd06618         164 RLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNE  243 (296)
T ss_pred             hccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCC
Confidence            654322   11223333333322          234667777777777655433211       11112222111 1111


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ..+.++.+++.+||+.+|.+|||+.++++.
T Consensus       244 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         244 GFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            356789999999999999999999999754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.97  E-value=6.1e-30  Score=220.57  Aligned_cols=227  Identities=15%  Similarity=0.134  Sum_probs=168.3

Q ss_pred             HhcCCCccCce--eecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEE
Q 045682           56 ATNNYDSEKVI--MKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        56 ~~~~~~~~~~l--g~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  130 (309)
                      ..++|+..+.+  |+|+||.||++..  ++..+|+|.+........     |+.....+ +||||+++++++..++..++
T Consensus        12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~i   86 (267)
T PHA03390         12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVL   86 (267)
T ss_pred             HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence            34556655555  9999999999998  778899999865432111     22222223 79999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeeccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSF  209 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~  209 (309)
                      ||||+++++|.+++.       ....+++..+..++.|+++||.|||   +.+++|+||+|+||+++.++ .++|+|||+
T Consensus        87 v~e~~~~~~L~~~l~-------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~  156 (267)
T PHA03390         87 IMDYIKDGDLFDLLK-------KEGKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGL  156 (267)
T ss_pred             EEEcCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence            999999999999986       3458999999999999999999999   89999999999999999988 999999999


Q ss_pred             ccccCCCccccccccccccccccC------CCcccHHHHHHHHhhccccccc----------ccccccCCCCCCchHHHH
Q 045682          210 SISIPEGELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEI----------IDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       210 a~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~g~~~~~~~~~~~  273 (309)
                      +..........|...+.+|+....      .+.|+++..++.++.+......          +....  ......+...+
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  234 (267)
T PHA03390        157 CKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--QKKLPFIKNVS  234 (267)
T ss_pred             ceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--cccCCcccccC
Confidence            987766555556655555554322      3555666566665544322110          00001  11112223567


Q ss_pred             HHHHHHHHHcccCCCCCCCC-HHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPT-MVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt-~~~l~~  299 (309)
                      ..+.+++..||+.+|.+||+ ++++++
T Consensus       235 ~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        235 KNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHHHHHHHhccChhhCCchHHHHhc
Confidence            88999999999999999996 688874

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=2.5e-30  Score=229.49  Aligned_cols=235  Identities=15%  Similarity=0.123  Sum_probs=171.2

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeee-CCc
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE-TQI  127 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~  127 (309)
                      +...+++|+..+.||.|+||.||+|..  ++..||+|++...  .....+.+..|+.++..++||||+++++++.. ...
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            344678899999999999999999987  7899999987543  22344678899999999999999999998865 557


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++++||+. ++|.+++.        ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+||
T Consensus        85 ~~lv~e~~~-~~L~~~~~--------~~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~df  152 (328)
T cd07856          85 IYFVTELLG-TDLHRLLT--------SRPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDF  152 (328)
T ss_pred             EEEEeehhc-cCHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCcc
Confidence            899999985 58998874        346888889999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCc-ccccccccccccccc-------CCCcccHHHHHHHHhhccccccccc---------------------c
Q 045682          208 SFSISIPEGE-LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEIID---------------------P  258 (309)
Q Consensus       208 g~a~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~  258 (309)
                      |++....... ...+...+.+++...       ..+.|+++..++.++.+.......+                     .
T Consensus       153 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (328)
T cd07856         153 GLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT  232 (328)
T ss_pred             ccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            9987653321 112333333443221       2344555555555554432211000                     0


Q ss_pred             ccc-----------CCCCCCch---HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 LIM-----------GDRSCSGK---EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ~~~-----------g~~~~~~~---~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...           ...+.+..   ...+.++.+++.+||+.+|++|||+.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~  287 (328)
T cd07856         233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA  287 (328)
T ss_pred             ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            000           00000000   123578999999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=3.3e-30  Score=223.70  Aligned_cols=231  Identities=18%  Similarity=0.180  Sum_probs=171.4

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEEEec
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-RMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      |+..+.||.|+||.||+|..  +++.|++|++..... .......+|+..+.+++ ||||+++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            45677899999999999999  678899999865432 22234567999999998 999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                       +|+|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 -~~~l~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          81 -EGNLYQLMKDR-----KGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             -CCCHHHHHHhc-----ccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence             77999988621     2347899999999999999999999   89999999999999999999999999999976644


Q ss_pred             Cc---ccccccccccccc-------ccCCCcccHHHHHHHHhhccccccc-------------ccc--------------
Q 045682          216 GE---LLTGLRAFDLARL-------NEDDGYVALRDHVKKYFEEDRLNEI-------------IDP--------------  258 (309)
Q Consensus       216 ~~---~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--------------  258 (309)
                      ..   ...+...+.+++.       ....+.|+++..++.++.+......             +..              
T Consensus       152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd07830         152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS  231 (283)
T ss_pred             CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence            22   1223333434432       2235677888887777654322100             000              


Q ss_pred             ----cccCCCCCCc---hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 ----LIMGDRSCSG---KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ----~~~g~~~~~~---~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                          ......+...   ....+..+.+++.+||+.+|++|||+.|++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence                0000000000   0011467999999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.97  E-value=3.7e-30  Score=223.00  Aligned_cols=224  Identities=14%  Similarity=0.157  Sum_probs=165.7

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ||+|+||+||++..  +++.+|+|.+....   ......+.+|+.++..++||||+++++++...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            69999999999987  78999999986532   22345578899999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc---
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE---  217 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---  217 (309)
                      .+++...     ....+++..+..++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++.......   
T Consensus        81 ~~~l~~~-----~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  152 (277)
T cd05577          81 KYHIYNV-----GEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIK  152 (277)
T ss_pred             HHHHHHc-----CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccc
Confidence            9998622     2246899999999999999999999   9999999999999999999999999999987654321   


Q ss_pred             cccccccccccccc------cCCCcccHHHHHHHHhhccccccccc---------ccccCCCCCCchHHHHHHHHHHHHH
Q 045682          218 LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNEIID---------PLIMGDRSCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       218 ~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~g~~~~~~~~~~~~~l~~li~~  282 (309)
                      ...+...+..++..      ...+.|+++..++.++.+.....-.+         ..... .+...+...+..+.+++.+
T Consensus       153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~  231 (277)
T cd05577         153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEA  231 (277)
T ss_pred             cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-ccccCCccCCHHHHHHHHH
Confidence            11223333333332      12355666666666654432211100         00000 1111222456789999999


Q ss_pred             cccCCCCCCC-----CHHHHH
Q 045682          283 CVNESPVDRP-----TMVDVA  298 (309)
Q Consensus       283 Cl~~~P~~RP-----t~~~l~  298 (309)
                      ||+.+|.+||     ++.+++
T Consensus       232 ~l~~~p~~R~~~~~~~~~~ll  252 (277)
T cd05577         232 LLQKDPEKRLGCRGGSADEVR  252 (277)
T ss_pred             HccCChhHccCCCcccHHHHH
Confidence            9999999999     555564

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=1.8e-32  Score=223.03  Aligned_cols=234  Identities=18%  Similarity=0.194  Sum_probs=184.8

Q ss_pred             CccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEecc
Q 045682           61 DSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-RMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      +....||.|+||+|++-.+  .|+..|||++..... ...++++.|.+...+- +.||||++||++..++..|+.||+|+
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd  146 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD  146 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence            3355799999999999999  889999999987653 5567788888876665 89999999999999999999999997


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      - ||..+.+....  -....+++..+-.|....+.||.||-.  ...|||||+||+|||++..|.+||||||++.....+
T Consensus       147 ~-SlDklYk~vy~--vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S  221 (361)
T KOG1006|consen  147 I-SLDKLYKRVYS--VQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS  221 (361)
T ss_pred             h-hHHHHHHHHHH--HHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence            5 88776543221  135678999889999999999999997  789999999999999999999999999998776544


Q ss_pred             c---cccccccccccccccCCCc-ccHHHHHHHH-----------hhccccc---ccccccccCCCCCCch----HHHHH
Q 045682          217 E---LLTGLRAFDLARLNEDDGY-VALRDHVKKY-----------FEEDRLN---EIIDPLIMGDRSCSGK----EQQLQ  274 (309)
Q Consensus       217 ~---~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~---~~~~~~~~g~~~~~~~----~~~~~  274 (309)
                      .   .-.|-.||.+|+.....+. +.+.+++|++           |+...+.   +-+..+..|+.|....    ...+.
T Consensus       222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~  301 (361)
T KOG1006|consen  222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSF  301 (361)
T ss_pred             HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCH
Confidence            2   4458899998887554444 7788888887           2222233   3333445566544322    13567


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+..++..|+.+|.++||..+++.+
T Consensus       302 ~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  302 SMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHHHHHHHHhhcccccCcchhhhhc
Confidence            8999999999999999999998864

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.7e-30  Score=230.62  Aligned_cols=230  Identities=13%  Similarity=0.159  Sum_probs=167.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  126 (309)
                      .++|...+.||+|+||.||+|.+  ++..||+|++...  .......+.+|+.++..++||||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            47788899999999999999997  7899999998653  2233456889999999999999999999987543      


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++|+||+.. +|.+++         ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|
T Consensus        94 ~~~lv~e~~~~-~l~~~~---------~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~d  160 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM---------GHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILD  160 (342)
T ss_pred             eEEEEeccccc-CHHHHH---------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEee
Confidence            46899999974 777663         246899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc-ccccccccccccccc-------CCCcccHHHHHHHHhhccccccc------cccccc--C--------
Q 045682          207 FSFSISIPEGE-LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEI------IDPLIM--G--------  262 (309)
Q Consensus       207 fg~a~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--g--------  262 (309)
                      ||+++...... ...+...+.+++...       ..+.|+++..++.++.+......      +.....  |        
T Consensus       161 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (342)
T cd07879         161 FGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ  240 (342)
T ss_pred             CCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            99987654322 122333333344321       23556666666666554322110      000000  0        


Q ss_pred             ------------CCCCCch-------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 ------------DRSCSGK-------EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ------------~~~~~~~-------~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                  ..+..+.       ...+..+.+++.+||+.||++||++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~  296 (342)
T cd07879         241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE  296 (342)
T ss_pred             HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                        0000000       023456889999999999999999999984

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=4.5e-30  Score=228.54  Aligned_cols=231  Identities=13%  Similarity=0.128  Sum_probs=167.0

Q ss_pred             cCCC-ccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchh--------------HHHHHHHHHHHhhccCCcceeeee
Q 045682           58 NNYD-SEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRM--------------YDCCINNIVYASQMIHRCFFKLIG  120 (309)
Q Consensus        58 ~~~~-~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~g  120 (309)
                      +.|. ..+.||.|+||.||+|..  +++.||+|.+.......              ...+.+|+.++..++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            4454 356799999999999997  78999999886542111              124779999999999999999999


Q ss_pred             eeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC
Q 045682          121 CCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN  200 (309)
Q Consensus       121 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~  200 (309)
                      ++..+...++||||+. |+|.+++.       ....+++.....++.|++.||.|||   +.+++|+||+|+||+++.++
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~-------~~~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~  156 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVD-------RKIRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKG  156 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCC
Confidence            9999999999999997 59999986       4556899999999999999999999   99999999999999999999


Q ss_pred             cEEEeecccccccCCCc------------------cccccccccccccccC-------CCcccHHHHHHHHhhccccccc
Q 045682          201 VAKLFDFSFSISIPEGE------------------LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEI  255 (309)
Q Consensus       201 ~~kl~Dfg~a~~~~~~~------------------~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  255 (309)
                      .++|+|||++.......                  ...+...+.+++...+       .+.|+++..++.++.+......
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~  236 (335)
T PTZ00024        157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG  236 (335)
T ss_pred             CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999999987654111                  0112223333443221       2445555555555544322110


Q ss_pred             cc----------ccc---cC---------------CCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          256 ID----------PLI---MG---------------DRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       256 ~~----------~~~---~g---------------~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+          ...   ..               ......    ....+.++.+++.+||+.+|++|||+.+++.
T Consensus       237 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        237 ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            00          000   00               000000    0123567889999999999999999999974

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.8e-30  Score=219.39  Aligned_cols=231  Identities=18%  Similarity=0.204  Sum_probs=175.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-----CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC--Cce
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-----KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIP  128 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~  128 (309)
                      .+|...+.||+|+||.||+|..  ++..||+|.+...     .......+.+|+.++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4688899999999999999998  7899999987432     123446788999999999999999999998764  457


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++++||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||
T Consensus        82 ~~v~e~~~~~~L~~~~~-------~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg  151 (264)
T cd06653          82 SIFVEYMPGGSIKDQLK-------AYGALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFG  151 (264)
T ss_pred             EEEEEeCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccc
Confidence            89999999999999986       4456889999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCC-------ccccccccccccccc------cCCCcccHHHHHHHHhhcccccc------cccccccCCCCCCch
Q 045682          209 FSISIPEG-------ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSCSGK  269 (309)
Q Consensus       209 ~a~~~~~~-------~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~  269 (309)
                      ++......       ....|...+.+++..      ...+.|+++..++.++.+.....      .+............+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p  231 (264)
T cd06653         152 ASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLP  231 (264)
T ss_pred             cccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCC
Confidence            99764321       122344444444432      23466777777777765443211      111111122222234


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...++++.+++.+||+ +|..||++.+++.
T Consensus       232 ~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         232 DGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             cccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            4667889999999999 6799999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=9e-31  Score=238.17  Aligned_cols=240  Identities=19%  Similarity=0.252  Sum_probs=180.1

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------ceEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------IPIL  130 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------~~~l  130 (309)
                      +...+.||+|+||.||+|++  +|+.||||.+.... ....+...+|+++|++++|||||+++++-.+..      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            45567899999999999998  89999999998753 455677899999999999999999999876543      6789


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee--cCCC--cEEEee
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF--NEEN--VAKLFD  206 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill--~~~~--~~kl~D  206 (309)
                      |||||.+|||...|..    ..+...|++.+.+.++.+++.||.|||   .++|+||||||.||++  ..+|  .-||+|
T Consensus        95 vmEyC~gGsL~~~L~~----PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtD  167 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNS----PENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTD  167 (732)
T ss_pred             EEeecCCCcHHHHhcC----cccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeec
Confidence            9999999999999962    345677999999999999999999999   9999999999999998  3444  469999


Q ss_pred             cccccccCCCccc---cccccccccccccC-------CCcccHHHHHHHHhhccc----------ccccc----------
Q 045682          207 FSFSISIPEGELL---TGLRAFDLARLNED-------DGYVALRDHVKKYFEEDR----------LNEII----------  256 (309)
Q Consensus       207 fg~a~~~~~~~~~---~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~----------~~~~~----------  256 (309)
                      ||+|+..+.++..   -|..-|..|+..+.       -+.|+++..++....+.-          ..+++          
T Consensus       168 fG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~  247 (732)
T KOG4250|consen  168 FGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG  247 (732)
T ss_pred             ccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence            9999999888743   36666655555442       245666666655532210          01111          


Q ss_pred             -----cccccCCC------CC--CchHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHHHHHH
Q 045682          257 -----DPLIMGDR------SC--SGKEQQLQAYAHLIFECVNESPVDRP--TMVDVAKKLKQMYR  306 (309)
Q Consensus       257 -----~~~~~g~~------~~--~~~~~~~~~l~~li~~Cl~~~P~~RP--t~~~l~~~L~~l~~  306 (309)
                           .....|..      |.  .........+..++...+..+|.+|.  .+.+....+..+..
T Consensus       248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~  312 (732)
T KOG4250|consen  248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN  312 (732)
T ss_pred             eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence                 11111111      11  11224456677888999999999998  88888887777653

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=6.3e-30  Score=228.53  Aligned_cols=240  Identities=14%  Similarity=0.119  Sum_probs=175.2

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeee
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCL  123 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~  123 (309)
                      ....++...+++|+..+.||+|+||.||+|..  ++..||+|++....  ....+.+.+|+.++.+++||||+++++++.
T Consensus         7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~   86 (345)
T cd07877           7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   86 (345)
T ss_pred             hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence            34556667789999999999999999999987  78999999987532  233466889999999999999999999886


Q ss_pred             eC------CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec
Q 045682          124 ET------QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN  197 (309)
Q Consensus       124 ~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~  197 (309)
                      ..      ...+++++++ +++|.+++.        ...+++..+..++.|++.||.|||   +.+++|+||||+||+++
T Consensus        87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~  154 (345)
T cd07877          87 PARSLEEFNDVYLVTHLM-GADLNNIVK--------CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVN  154 (345)
T ss_pred             ecccccccccEEEEehhc-ccCHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEc
Confidence            43      3467888876 679988874        346899999999999999999999   99999999999999999


Q ss_pred             CCCcEEEeecccccccCCCc-cccccccccccccc-------cCCCcccHHHHHHHHhhcccccccccc------ccc--
Q 045682          198 EENVAKLFDFSFSISIPEGE-LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEIIDP------LIM--  261 (309)
Q Consensus       198 ~~~~~kl~Dfg~a~~~~~~~-~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--  261 (309)
                      .++.+||+|||++....... ...+...+.+++..       ...+.|+++..++.++.+.......+.      ...  
T Consensus       155 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  234 (345)
T cd07877         155 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV  234 (345)
T ss_pred             CCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            99999999999987654332 12333334444422       124566666666666544322110000      000  


Q ss_pred             C-----------------------CCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 G-----------------------DRSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 g-----------------------~~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +                       ..+....    ...+.++.+++.+|++.+|.+|||+.+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence            0                       0000000    012456889999999999999999999874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=5.5e-30  Score=219.71  Aligned_cols=233  Identities=16%  Similarity=0.164  Sum_probs=171.5

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-----CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-----KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .|...+.||+|+||.||++.+  .+..+++|.++..     ......++..|+.++..++||||+++++++.+....++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            367788999999999999988  3444555555432     122334577899999999999999999999998999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      +||+++++|.+++....   .....+++..++.++.|++.||.|||   +.+++|+||+|+||+++. +.++|+|||++.
T Consensus        81 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~  153 (260)
T cd08222          81 TEYCEGRDLDCKLEELK---HTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSR  153 (260)
T ss_pred             EEeCCCCCHHHHHHHHh---hcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCcee
Confidence            99999999999885321   13467999999999999999999999   999999999999999975 569999999987


Q ss_pred             ccCCCc----cccccccccccccc------cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHH
Q 045682          212 SIPEGE----LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       212 ~~~~~~----~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      ......    ...|...+.+++..      ...+.|+++..++.++.+...      .........+..+. .+...+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  232 (260)
T cd08222         154 LLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS-LPETYSRQ  232 (260)
T ss_pred             ecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC-CcchhcHH
Confidence            653322    22233333333321      124666677677766544322      11222222232222 23467788


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+++.+||+.+|++||++.++++
T Consensus       233 ~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         233 LNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhh
Confidence            999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-31  Score=255.47  Aligned_cols=233  Identities=17%  Similarity=0.220  Sum_probs=189.9

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .+-++..+..||.|.||.||.|+.  +|...|||.+.-+.  ....+.+.+|..+|..+.|||+|+++|+-.++...+|.
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            455677888999999999999998  88999999876653  33446788999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      ||||.+|+|.+.++       .++..++....-+..|++.|++|||   ..+||||||||.||+++.+|.+|++|||.|.
T Consensus      1313 MEyC~~GsLa~ll~-------~gri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLE-------HGRIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAV 1382 (1509)
T ss_pred             HHHhccCcHHHHHH-------hcchhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeeccccee
Confidence            99999999999986       4566777777889999999999999   9999999999999999999999999999998


Q ss_pred             ccCCCc--------cccccccccccccccCC---------CcccHHHHHHHHhhcc-------cccccccccccCCCCCC
Q 045682          212 SIPEGE--------LLTGLRAFDLARLNEDD---------GYVALRDHVKKYFEED-------RLNEIIDPLIMGDRSCS  267 (309)
Q Consensus       212 ~~~~~~--------~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~  267 (309)
                      .+....        -..|.+.|.+|+..-+.         +.|+++..+.++..+.       +--+++..+..|..|..
T Consensus      1383 ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~ 1462 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQI 1462 (1509)
T ss_pred             EecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCC
Confidence            876553        45677888877754422         2333333332222221       22356777777777654


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      + ...+.+-.+++.+|++.||+.|.++.||++
T Consensus      1463 P-~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1463 P-ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             c-hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            4 468899999999999999999999999875

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=7.9e-30  Score=222.96  Aligned_cols=231  Identities=14%  Similarity=0.123  Sum_probs=156.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--C---CeEEEEEEecCCCchhH-----------HHHHHHHHHHhhccCCcceeeee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--Q---ERLISVMKFDASKPRMY-----------DCCINNIVYASQMIHRCFFKLIG  120 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~---~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~l~g  120 (309)
                      .+.|...+.||+|+||.||+|.+  +   +..+++|..........           .....+...+..++|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            35788899999999999999998  3   34566665433221111           11223334455678999999999


Q ss_pred             eeeeCC----ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee
Q 045682          121 CCLETQ----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF  196 (309)
Q Consensus       121 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill  196 (309)
                      ++....    ..++++|++.. ++.+.+.       .....++..+..++.|++.||+|||   +.+++||||||+|||+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill  159 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFK-------RIKCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMV  159 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHH-------hhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence            776543    34677777654 6666664       2334678888999999999999999   9999999999999999


Q ss_pred             cCCCcEEEeecccccccCCC-----------cccccccccccccccc------CCCcccHHHHHHHHhhcccccc-----
Q 045682          197 NEENVAKLFDFSFSISIPEG-----------ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE-----  254 (309)
Q Consensus       197 ~~~~~~kl~Dfg~a~~~~~~-----------~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----  254 (309)
                      +.++.++|+|||+|+....+           ....|...+.+++...      ..+.|+++..++.+..+.....     
T Consensus       160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~  239 (294)
T PHA02882        160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN  239 (294)
T ss_pred             cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence            99999999999999765321           1223444444444322      2245555555555543321111     


Q ss_pred             ----------cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          255 ----------IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       255 ----------~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                                .+.....+....   ..++.++.+++..||+.+|++||++.+|.+.|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        240 GNLIHAAKCDFIKRLHEGKIKI---KNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             hHHHHHhHHHHHHHhhhhhhcc---CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence                      112222222221   23468899999999999999999999999876

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=1.2e-29  Score=220.09  Aligned_cols=224  Identities=14%  Similarity=0.163  Sum_probs=166.2

Q ss_pred             ceeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHH---HhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           65 VIMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVY---ASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~---l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      .||+|+||.||+|..  +++.||+|.+.....   .....+..|..+   ++...||||+++++++.+.+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999988  678999999865421   112234444443   444579999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++......
T Consensus        81 g~~L~~~l~-------~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~  150 (278)
T cd05606          81 GGDLHYHLS-------QHGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  150 (278)
T ss_pred             CCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc
Confidence            999999986       4567999999999999999999999   899999999999999999999999999998755322


Q ss_pred             c--ccccccccccccccc-------CCCcccHHHHHHHHhhccccccc--------ccccccCCCCCCchHHHHHHHHHH
Q 045682          217 E--LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEI--------IDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       217 ~--~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      .  ...|...+.+++...       ..+.|+++..++.++.+.....-        ........ ....+...+.++.++
T Consensus       151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l  229 (278)
T cd05606         151 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-AVELPDSFSPELRSL  229 (278)
T ss_pred             CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc-CCCCCCcCCHHHHHH
Confidence            1  234555555554322       23666777777777654432111        11111111 111222456889999


Q ss_pred             HHHcccCCCCCCC-----CHHHHHH
Q 045682          280 IFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      +.+||+.+|.+||     ++.++++
T Consensus       230 i~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         230 LEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHhhcCHHhccCCCCCCHHHHHh
Confidence            9999999999999     8888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=4.5e-29  Score=216.86  Aligned_cols=231  Identities=16%  Similarity=0.195  Sum_probs=168.5

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhc---cCCcceeeeeeeeeCCc-----
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQM---IHRCFFKLIGCCLETQI-----  127 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~~~-----  127 (309)
                      |+..+.||+|+||.||+|.+  ++..+|+|.+....  ......+.+|+.++.++   +|||++++++++.....     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            55678899999999999999  58999999987532  22234566788877766   59999999999988766     


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .+++|||+++ +|.+++...     ....+++..++.++.|++.||.|||   +.+++|+||+|+||+++.++.+||+||
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~-----~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~df  151 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKC-----PKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADF  151 (287)
T ss_pred             eEEEehhccc-CHHHHHHHc-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEecc
Confidence            8999999985 899987621     2236899999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCcc---cccccccccccc------ccCCCcccHHHHHHHHhhccccccc----------ccccc--------
Q 045682          208 SFSISIPEGEL---LTGLRAFDLARL------NEDDGYVALRDHVKKYFEEDRLNEI----------IDPLI--------  260 (309)
Q Consensus       208 g~a~~~~~~~~---~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--------  260 (309)
                      |++........   ..+...+.+++.      ....+.|+++..++.++.+......          ++...        
T Consensus       152 g~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (287)
T cd07838         152 GLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP  231 (287)
T ss_pred             CcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence            99877644321   112223333332      2234677888777777654322110          00000        


Q ss_pred             ---------cCCCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          261 ---------MGDRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       261 ---------~g~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                               ........    ....+..+.+++.+||+.||.+||++.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence                     00000000    1134577889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=4.9e-30  Score=229.06  Aligned_cols=232  Identities=15%  Similarity=0.168  Sum_probs=170.9

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc----
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI----  127 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~----  127 (309)
                      ..++|+....||+|++|.||+|.+  ++..||+|.+...  .......+.+|+.+++.++|||++++.+++.....    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            356788899999999999999999  6789999998653  23344667889999999999999999998876554    


Q ss_pred             --eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          128 --PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       128 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                        .++|+||+ +++|.+++.        ...+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~--------~~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~  160 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVK--------CQKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKIL  160 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEc
Confidence              89999998 459999975        357999999999999999999999   8999999999999999999999999


Q ss_pred             ecccccccCCCc-cccccccccccccc-------cCCCcccHHHHHHHHhhcccccc------ccccccc--CCC-----
Q 045682          206 DFSFSISIPEGE-LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIM--GDR-----  264 (309)
Q Consensus       206 Dfg~a~~~~~~~-~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--g~~-----  264 (309)
                      |||++....... ...+...+.+++..       ...+.|+++..++.++.+.....      .+.....  +..     
T Consensus       161 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~  240 (343)
T cd07851         161 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL  240 (343)
T ss_pred             cccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence            999998664321 12233333333321       22355666666666554432110      0000000  000     


Q ss_pred             -------------------CCC---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 -------------------SCS---GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 -------------------~~~---~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                         ...   .....+.++.+++.+||+.+|.+|||+.+|++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence                               000   00123577999999999999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=1.1e-29  Score=225.82  Aligned_cols=230  Identities=15%  Similarity=0.145  Sum_probs=166.2

Q ss_pred             CCCccCceeecCCeEEEEEEe--C--CeEEEEEEecCC--CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeC----Cc
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--Q--ERLISVMKFDAS--KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLET----QI  127 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~--~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~----~~  127 (309)
                      +|...+.||+|+||.||++..  +  +..||+|++...  .....+.+.+|+.++.++ +||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            366778899999999999998  4  678999998653  222346788999999999 699999999875432    35


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++++||+. ++|.+++.       ....+++..+..++.||+.||.|||   ..+++||||||+||+++.++.+||+||
T Consensus        81 ~~~~~e~~~-~~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Df  149 (332)
T cd07857          81 LYLYEELME-ADLHQIIR-------SGQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDF  149 (332)
T ss_pred             EEEEEeccc-CCHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcC
Confidence            788889886 58999986       4567999999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCc--------cccccccccccccccC-------CCcccHHHHHHHHhhccccccccc---------------
Q 045682          208 SFSISIPEGE--------LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEIID---------------  257 (309)
Q Consensus       208 g~a~~~~~~~--------~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---------------  257 (309)
                      |+++......        ...|...+.+++....       .+.|+++..++.++.+.......+               
T Consensus       150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  229 (332)
T cd07857         150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTP  229 (332)
T ss_pred             CCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCC
Confidence            9998654321        1234445555553322       244555555555554432211000               


Q ss_pred             ------cccc----------CCCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 ------PLIM----------GDRSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 ------~~~~----------g~~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                            ....          +..+....    ...+..+.+++.+||+.+|.+|||+.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                  0000          00000000    012467899999999999999999999873

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=4.7e-30  Score=229.11  Aligned_cols=230  Identities=17%  Similarity=0.166  Sum_probs=170.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeC----------
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLET----------  125 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~----------  125 (309)
                      .+|...+.||.|+||.||+|..  ++..||+|.+........+.+.+|+.+++.++||||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            6788899999999999999998  6899999998776656667789999999999999999999876653          


Q ss_pred             ----CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec-CCC
Q 045682          126 ----QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN-EEN  200 (309)
Q Consensus       126 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~-~~~  200 (309)
                          ...++||||++ ++|.+++.        ...+++..+..++.||+.||.|||   +.+++||||||+||+++ .++
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~--------~~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~  152 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLE--------QGPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDL  152 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHH--------cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCc
Confidence                35789999998 48988874        346899999999999999999999   89999999999999997 456


Q ss_pred             cEEEeecccccccCCCc-------cccccccccccccc-------cCCCcccHHHHHHHHhhccccccccc------ccc
Q 045682          201 VAKLFDFSFSISIPEGE-------LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEIID------PLI  260 (309)
Q Consensus       201 ~~kl~Dfg~a~~~~~~~-------~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  260 (309)
                      .+||+|||++.......       ...+...+.+++..       ...+.|+++..++.++.+.......+      ...
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~  232 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL  232 (342)
T ss_pred             eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            78999999987653221       11233334444421       12456677777776665443221000      000


Q ss_pred             ------------------------cCCCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          261 ------------------------MGDRSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       261 ------------------------~g~~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                              ....+..+.    ...+.++.+++..||+.||.+|||+.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence                                    000000000    123467889999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-30  Score=201.42  Aligned_cols=219  Identities=16%  Similarity=0.183  Sum_probs=162.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +|+..++||+|.||+||+|+.  +++.||+|++...  +........+|+.+|+.+.|.|||+++++...++...+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            466778899999999999998  7799999998664  345557789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      |.. +|..|...      -.+.++.+....++.|+++||.|+|   +.++.||||||+|.||+.+|..|++|||+++.+.
T Consensus        83 cdq-dlkkyfds------lng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafg  152 (292)
T KOG0662|consen   83 CDQ-DLKKYFDS------LNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFG  152 (292)
T ss_pred             hhH-HHHHHHHh------cCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcC
Confidence            987 89988752      4577999999999999999999999   9999999999999999999999999999998653


Q ss_pred             CC------ccccc-cccccccccccCCCcccHHHHHHHHhhcccccccccccccCCCCCCchHHHHHHHHHHHHHcccCC
Q 045682          215 EG------ELLTG-LRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNES  287 (309)
Q Consensus       215 ~~------~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~  287 (309)
                      -.      +..|- .+|   +....+...++-..++|+      .+.++..+.....|..+..+...++..+....-.+.
T Consensus       153 ipvrcysaevvtlwyrp---pdvlfgakly~tsidmws------agcifaelanagrplfpg~dvddqlkrif~~lg~p~  223 (292)
T KOG0662|consen  153 IPVRCYSAEVVTLWYRP---PDVLFGAKLYSTSIDMWS------AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT  223 (292)
T ss_pred             CceEeeeceeeeeeccC---cceeeeeehhccchHhhh------cchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCc
Confidence            21      11110 001   001111112222223332      223333333333444444466777888777777777


Q ss_pred             CCCCCCHHH
Q 045682          288 PVDRPTMVD  296 (309)
Q Consensus       288 P~~RPt~~~  296 (309)
                      -+.-|+|.+
T Consensus       224 ed~wps~t~  232 (292)
T KOG0662|consen  224 EDQWPSMTK  232 (292)
T ss_pred             cccCCcccc
Confidence            777777754

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.8e-29  Score=215.05  Aligned_cols=219  Identities=19%  Similarity=0.193  Sum_probs=170.5

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ||.|+||.||++..  ++..+++|.+.....   .....+.+|+.+++.++||||+++++.+..+...++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            69999999999998  589999999876532   2456789999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC----
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG----  216 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----  216 (309)
                      .+++.       ....+++..+..++.|++.|+.|||   +.+++|+||+|+||+++.++.++|+|||++......    
T Consensus        81 ~~~l~-------~~~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~  150 (250)
T cd05123          81 FSHLS-------KEGRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRT  150 (250)
T ss_pred             HHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcc
Confidence            99986       4457899999999999999999999   899999999999999999999999999998766442    


Q ss_pred             ccccccccccccccc------cCCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHHHHHHcc
Q 045682          217 ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIFECV  284 (309)
Q Consensus       217 ~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl  284 (309)
                      ....+...+..|+..      ...+.|+++..++.++.+....      +.......+..+  .+...+..+.+++.+||
T Consensus       151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~i~~~l  228 (250)
T cd05123         151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR--FPEFLSPEARDLISGLL  228 (250)
T ss_pred             cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHh
Confidence            122333334333322      2346677777777776554322      122222222221  22244678999999999


Q ss_pred             cCCCCCCCCHHH
Q 045682          285 NESPVDRPTMVD  296 (309)
Q Consensus       285 ~~~P~~RPt~~~  296 (309)
                      ..||++|||+.+
T Consensus       229 ~~~p~~R~~~~~  240 (250)
T cd05123         229 QKDPTKRLGSGG  240 (250)
T ss_pred             cCCHhhCCCccc
Confidence            999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=4.7e-30  Score=213.93  Aligned_cols=236  Identities=19%  Similarity=0.228  Sum_probs=185.1

Q ss_pred             cHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeC
Q 045682           49 SAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLET  125 (309)
Q Consensus        49 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~  125 (309)
                      .++++...|     .++||+|+|+.|..++.  ++..+|||++.+.......++.+|++++.++ .|+||+.|+++|.++
T Consensus        74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            356666666     46799999999999987  9999999999999877788999999999999 799999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc---E
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV---A  202 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~---~  202 (309)
                      ..+|||||-+.||+|...+.       ....+++..+.++..+||.||.|||   .++|.||||||+|||..+...   +
T Consensus       149 ~~FYLVfEKm~GGplLshI~-------~~~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPv  218 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQ-------KRKHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPV  218 (463)
T ss_pred             ceEEEEEecccCchHHHHHH-------HhhhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCce
Confidence            99999999999999999987       6678999999999999999999999   999999999999999976553   7


Q ss_pred             EEeecccccccCCCc---------cc--ccccccccccccc-----------CCCcccHHHHHHHHhhcccc--------
Q 045682          203 KLFDFSFSISIPEGE---------LL--TGLRAFDLARLNE-----------DDGYVALRDHVKKYFEEDRL--------  252 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~---------~~--~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~--------  252 (309)
                      |||||.++.....+.         ++  .|.--|.+|+...           .=+.|+++...+-++.+...        
T Consensus       219 KiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d  298 (463)
T KOG0607|consen  219 KICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD  298 (463)
T ss_pred             eeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc
Confidence            999999877653322         11  1333333333211           01345566665555443221        


Q ss_pred             -------------cccccccccCCCCCCch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          253 -------------NEIIDPLIMGDRSCSGK--EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       253 -------------~~~~~~~~~g~~~~~~~--~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                   ..++..+-.|.+.++..  ...+.+..+++...+..+|.+|.++.+++.
T Consensus       299 CGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  299 CGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             CCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence                         12455666677666533  245788999999999999999999988865

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.3e-29  Score=236.52  Aligned_cols=237  Identities=15%  Similarity=0.110  Sum_probs=162.6

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe---CCeEEEEE------------------EecCCCchhHHHHHHHHHHHhhccCCc
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC---QERLISVM------------------KFDASKPRMYDCCINNIVYASQMIHRC  114 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~n  114 (309)
                      ..++|...+.||+|+||+||++.+   .+...+.|                  .+. ........+.+|+.++.+++|||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence            457799999999999999999876   22222222                  111 11223456889999999999999


Q ss_pred             ceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       115 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                      |+++++++...+..++|+|++.+ +|.+++.....  ..........+..++.||+.||.|||   +.+||||||||+||
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NI  298 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAF--DWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENI  298 (501)
T ss_pred             cCcEeEEEEECCeeEEEEecccc-CHHHHHhhccc--cccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHE
Confidence            99999999999999999999864 78887642111  11222345667789999999999999   99999999999999


Q ss_pred             eecCCCcEEEeecccccccCCCc-----cccccccccccccccC------CCcccHHHHHHHHhhcccc-----------
Q 045682          195 LFNEENVAKLFDFSFSISIPEGE-----LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL-----------  252 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~~~~~-----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-----------  252 (309)
                      |++.++.+||+|||+++......     ...|...+.+++....      .+.|+++..+++++.+...           
T Consensus       299 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~  378 (501)
T PHA03210        299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK  378 (501)
T ss_pred             EECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence            99999999999999998764332     2346666666654332      3556666666666533210           


Q ss_pred             --cccccccc--cCCCCC-------------------Cch-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          253 --NEIIDPLI--MGDRSC-------------------SGK-----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       253 --~~~~~~~~--~g~~~~-------------------~~~-----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                        .++++...  ....+.                   ..+     ...+..+.+++.+||+.||.+|||+.|+++
T Consensus       379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence              01111000  000000                   000     011245677899999999999999999975

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=2.6e-30  Score=211.37  Aligned_cols=228  Identities=15%  Similarity=0.176  Sum_probs=177.4

Q ss_pred             cCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           63 EKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      ...||.|+-|+|+++++  +|..+|||.+.+.. ....++++..+.++... ++|+||+.+|+|..+...++.||.|.. 
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-  175 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-  175 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence            45699999999999999  67999999998764 45567888888888777 599999999999999999999999864 


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc-
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-  217 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-  217 (309)
                      .++.+|+.      ..+++++..+-++...+++||.||.+  ..+|+|||+||+|||+|+.|++|+||||++....++. 
T Consensus       176 C~ekLlkr------ik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA  247 (391)
T KOG0983|consen  176 CAEKLLKR------IKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA  247 (391)
T ss_pred             HHHHHHHH------hcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccc
Confidence            66666652      35679999889999999999999997  7899999999999999999999999999998765543 


Q ss_pred             --ccccccccccccccc--CCCcccHHHHHHHH-------------hhcc-cccccccccccCCCCCCch-HHHHHHHHH
Q 045682          218 --LLTGLRAFDLARLNE--DDGYVALRDHVKKY-------------FEED-RLNEIIDPLIMGDRSCSGK-EQQLQAYAH  278 (309)
Q Consensus       218 --~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~-------------~~~~-~~~~~~~~~~~g~~~~~~~-~~~~~~l~~  278 (309)
                        -..|-.+|.+++...  ....+.+..++|++             |.+. .-.+++..++....|..+. ...+..+.+
T Consensus       248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~  327 (391)
T KOG0983|consen  248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQS  327 (391)
T ss_pred             cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHH
Confidence              445666777665432  23445566666665             2221 2234444555444333322 236788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++..||+.|+.+||...++++
T Consensus       328 fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  328 FVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHHHHhhcCcccCcchHHHhc
Confidence            999999999999999999875

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=1.7e-29  Score=222.13  Aligned_cols=233  Identities=15%  Similarity=0.156  Sum_probs=167.3

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  126 (309)
                      .++|+..+.||+|+||.||+|.+  +++.+++|++....  ......+.+|+.++..++||||+++++++....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            46799999999999999999998  68999999885532  222345778999999999999999999875433      


Q ss_pred             --ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          127 --IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       127 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                        ..++|+||+.+ +|...+.      .....+++..+..++.|+++||+|||   +.+++|+||||+||++++++.++|
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~------~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l  156 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLE------NPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKI  156 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHh------ccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence              46999999975 6777654      13457999999999999999999999   899999999999999999999999


Q ss_pred             eecccccccCCCccc---------------cccccccccccc-------cCCCcccHHHHHHHHhhcccccccc------
Q 045682          205 FDFSFSISIPEGELL---------------TGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEII------  256 (309)
Q Consensus       205 ~Dfg~a~~~~~~~~~---------------~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------  256 (309)
                      +|||++.........               .+...+.+|+..       ...+.|+++..++.++.+.....-.      
T Consensus       157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~  236 (311)
T cd07866         157 ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL  236 (311)
T ss_pred             CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            999998765432211               112223334321       1235666666666665543221100      


Q ss_pred             ---cc----------------------cccCCCCCCch---HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          257 ---DP----------------------LIMGDRSCSGK---EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       257 ---~~----------------------~~~g~~~~~~~---~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                         ..                      ......+....   ......+.+++.+||+.+|.+|||+.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence               00                      00000000000   012356889999999999999999999874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=2.2e-30  Score=247.07  Aligned_cols=235  Identities=19%  Similarity=0.247  Sum_probs=167.4

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-----
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-----  126 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----  126 (309)
                      ....+|+...+||+||||.||+++.  +|+.+|||++... +......+.+|++.|++|+|||||+++..+.+..     
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~  555 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV  555 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence            4557788899999999999999999  9999999998765 3344567889999999999999999886542110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045682          127 --------------------------------------------------------------------------------  126 (309)
Q Consensus       127 --------------------------------------------------------------------------------  126 (309)
                                                                                                      
T Consensus       556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~  635 (1351)
T KOG1035|consen  556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD  635 (1351)
T ss_pred             ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------ceEEEEEeccCCChhhhhhhhCCCCCCCCCC-CHHHHHHHHHHHHH
Q 045682          127 ----------------------------------IPILVFEYINCGSLADRIRIQHNPQPQHEPL-LLTHRLKIAKDIAN  171 (309)
Q Consensus       127 ----------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l-~~~~~~~i~~~ia~  171 (309)
                                                        ..||-||||+..++.+++..       .... .....++++.+|+.
T Consensus       636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~-------N~~~~~~d~~wrLFreIlE  708 (1351)
T KOG1035|consen  636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR-------NHFNSQRDEAWRLFREILE  708 (1351)
T ss_pred             cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh-------cccchhhHHHHHHHHHHHH
Confidence                                              12566777777666666541       1111 35667899999999


Q ss_pred             HHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC-------------------C---ccccccccccccc
Q 045682          172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE-------------------G---ELLTGLRAFDLAR  229 (309)
Q Consensus       172 ~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~-------------------~---~~~~g~~~~~~~~  229 (309)
                      ||+|+|   +.++|||||||.||++++++.|||+|||+|.....                   +   .-..|+.-|.+|+
T Consensus       709 GLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPE  785 (1351)
T KOG1035|consen  709 GLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPE  785 (1351)
T ss_pred             HHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHH
Confidence            999999   89999999999999999999999999999976210                   0   0122444444555


Q ss_pred             cccCC---------CcccHHHHHHHHhhccc----ccccccccccCCCCCC--chHHHHHHHHHHHHHcccCCCCCCCCH
Q 045682          230 LNEDD---------GYVALRDHVKKYFEEDR----LNEIIDPLIMGDRSCS--GKEQQLQAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       230 ~~~~~---------~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~--~~~~~~~~l~~li~~Cl~~~P~~RPt~  294 (309)
                      ...+.         +.++++....+++....    -..++..+..|..|.+  ...+..+.-.++|+++++.||++|||+
T Consensus       786 ll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA  865 (1351)
T KOG1035|consen  786 LLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTA  865 (1351)
T ss_pred             HhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCH
Confidence            43332         23444444444433211    1234455555666555  112445556789999999999999999


Q ss_pred             HHHHH
Q 045682          295 VDVAK  299 (309)
Q Consensus       295 ~~l~~  299 (309)
                      .|++.
T Consensus       866 ~eLL~  870 (1351)
T KOG1035|consen  866 TELLN  870 (1351)
T ss_pred             HHHhh
Confidence            99974

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2e-29  Score=218.48  Aligned_cols=230  Identities=17%  Similarity=0.183  Sum_probs=170.3

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      |+..+.||+|++|.||+|..  +++.+|+|.+....  ......+..|+.+++.++|+|++++++++.+.+..++|+||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            45567899999999999999  58999999987653  344567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++ +|.+++...      ...+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++.....
T Consensus        81 ~~-~l~~~i~~~------~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829          81 DM-DLKKYLDKR------PGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGI  150 (282)
T ss_pred             Cc-CHHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCC
Confidence            84 999998621      257999999999999999999999   89999999999999999999999999999876543


Q ss_pred             Cc----ccccccccccccc-------ccCCCcccHHHHHHHHhhccccccc-----------------------------
Q 045682          216 GE----LLTGLRAFDLARL-------NEDDGYVALRDHVKKYFEEDRLNEI-----------------------------  255 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------  255 (309)
                      ..    ...+...+.+++.       ....+.|+++..++.++.+......                             
T Consensus       151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07829         151 PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP  230 (282)
T ss_pred             CccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence            22    1111122222322       1234666777666666544321100                             


Q ss_pred             -ccccccCCCCCCc---hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          256 -IDPLIMGDRSCSG---KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       256 -~~~~~~g~~~~~~---~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       .+...........   ....+..+.+++.+||+.+|++||++.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence             0000000000000   0022567999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.96  E-value=2.6e-29  Score=227.50  Aligned_cols=178  Identities=19%  Similarity=0.213  Sum_probs=142.7

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc------CCcceeeeeeeeeCCceEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI------HRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~g~~~~~~~~~l  130 (309)
                      .|++.++||+|+||.|-+|.+  +++.||||+++... ....+-..|+.+|..|+      --|+|++++++...+..+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            578889999999999999998  78999999998875 44567788999999996      3489999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC--CcEEEeecc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE--NVAKLFDFS  208 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg  208 (309)
                      |+|.+.. ||.++|+.     +...+++...+..|+.||+.||.+||   +.+|||+||||+||||.+.  ..+||+|||
T Consensus       266 VfELL~~-NLYellK~-----n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFG  336 (586)
T KOG0667|consen  266 VFELLST-NLYELLKN-----NKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFG  336 (586)
T ss_pred             eehhhhh-hHHHHHHh-----cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecc
Confidence            9999976 99999983     35667999999999999999999999   9999999999999999654  369999999


Q ss_pred             cccccCCCc-ccccccccccccccc------CCCcccHHHHHHHH
Q 045682          209 FSISIPEGE-LLTGLRAFDLARLNE------DDGYVALRDHVKKY  246 (309)
Q Consensus       209 ~a~~~~~~~-~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~  246 (309)
                      .|......- .....+-|.+|+...      .-+.|+++..+.++
T Consensus       337 SSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL  381 (586)
T KOG0667|consen  337 SSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAEL  381 (586)
T ss_pred             cccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhH
Confidence            987664432 111222222222221      22567777666555

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.96  E-value=5.9e-29  Score=210.65  Aligned_cols=212  Identities=13%  Similarity=0.059  Sum_probs=155.5

Q ss_pred             cCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCChhhhhhh
Q 045682           69 RSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRI  146 (309)
Q Consensus        69 G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~  146 (309)
                      |.+|.||++.+  +++.+|+|.+....     .+.+|...+....||||+++++++......++||||+++|+|.+++. 
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-   77 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS-   77 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH-
Confidence            88999999999  78999999986653     23345555556679999999999999999999999999999999986 


Q ss_pred             hCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc-cccccccc
Q 045682          147 QHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-LLTGLRAF  225 (309)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~g~~~~  225 (309)
                            ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.++++|||.+....... ...+...+
T Consensus        78 ------~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y  148 (237)
T cd05576          78 ------KFLNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMY  148 (237)
T ss_pred             ------HhcCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccc
Confidence                  3456899999999999999999999   9999999999999999999999999999876543321 11112223


Q ss_pred             cccccc------cCCCcccHHHHHHHHhhcccccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHH
Q 045682          226 DLARLN------EDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMV  295 (309)
Q Consensus       226 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~  295 (309)
                      .+++..      ...+.|+++..++.++.+...................+...+..+.+++.+||+.||++||++.
T Consensus       149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            333321      2235666666666666554322111111111111112234567899999999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-28  Score=228.25  Aligned_cols=243  Identities=18%  Similarity=0.204  Sum_probs=188.3

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      ..++.+...++-|+..+.||+|.+|.||++..  +++.+|+|+.....+. .+++..|..+|+.. .|||++.++|++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            45566667788899999999999999999988  8899999998776533 36678899999988 89999999999864


Q ss_pred             -----CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          125 -----TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       125 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                           ++.+|||||||.+||..|+++..     .+..+.|..+..|+..++.|+.+||   ...++|||+|-.|||++.+
T Consensus        88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~-----~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e  159 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGGSVTDLVKNT-----KGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTEN  159 (953)
T ss_pred             ecCCCCCeEEEEeeccCCccHHHHHhhh-----cccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEecc
Confidence                 56899999999999999998733     3778999999999999999999999   9999999999999999999


Q ss_pred             CcEEEeecccccccCCCc----cccccccccccccccCCC----cccHHHHHHHH-------hhcccccc------cccc
Q 045682          200 NVAKLFDFSFSISIPEGE----LLTGLRAFDLARLNEDDG----YVALRDHVKKY-------FEEDRLNE------IIDP  258 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~----~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~-------~~~~~~~~------~~~~  258 (309)
                      +.|||+|||.+.......    ...|.+.+.+++.....+    .+....|+|.+       -++.....      .+-.
T Consensus       160 ~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~  239 (953)
T KOG0587|consen  160 AEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFL  239 (953)
T ss_pred             CcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhcc
Confidence            999999999998776543    556777777766533221    12233344443       22222111      1111


Q ss_pred             cccCCCCCC-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 LIMGDRSCS-GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ~~~g~~~~~-~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.....|.. -+..++.++.++|..||.+|-..||++.++++
T Consensus       240 IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  240 IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            111111111 24688999999999999999999999998864

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-29  Score=216.07  Aligned_cols=255  Identities=15%  Similarity=0.202  Sum_probs=200.2

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeee
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGC  121 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~  121 (309)
                      ..++.....++....++.+|.||.||.|.|       +.+.|.+|.++.. ++-....++.|.-.+..+.|||+..+.++
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            445566677888899999999999999987       2256788887665 44566778999999999999999999999


Q ss_pred             eeeC-CceEEEEEeccCCChhhhhhhhCC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          122 CLET-QIPILVFEYINCGSLADRIRIQHN-PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       122 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                      +.++ ..+++++.+..-|+|..||...+. +....+.++..+...++.|++.|++|||   ..++||.||.++|++||+.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQ  432 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhh
Confidence            9764 578999999999999999986654 3344566888899999999999999999   9999999999999999999


Q ss_pred             CcEEEeecccccccCCCcc------------ccccccccccccccCCCcccHHHHHHHHhhcc-ccccccc------ccc
Q 045682          200 NVAKLFDFSFSISIPEGEL------------LTGLRAFDLARLNEDDGYVALRDHVKKYFEED-RLNEIID------PLI  260 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~  260 (309)
                      .+|||+|-.+++..-+.+.            +....+........+++.|+++..+|++..-. ....-+|      .+.
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk  512 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK  512 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh
Confidence            9999999999987644331            11111222233445668899999999886432 2222223      333


Q ss_pred             cCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          261 MGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       261 ~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .|.. ...|.+|++++..+|.-||...|++||++.|++..|.++..++
T Consensus       513 dGyR-laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql  559 (563)
T KOG1024|consen  513 DGYR-LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL  559 (563)
T ss_pred             ccce-ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence            3444 3444599999999999999999999999999999999998765

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.4e-28  Score=218.08  Aligned_cols=228  Identities=15%  Similarity=0.134  Sum_probs=175.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCC--CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDAS--KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ..|+..+.||.||.+.||++.. +.+.+|+|++...  +.....-|.+|+.+|.+| .|.+||+|++|-..++..|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            4488899999999999999998 6788899886543  455667899999999999 79999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |=+ .+|..+|..      ....++...+..+..|++.|+.++|   ..+|||.||||.|+|+- .|.+||+|||+|..+
T Consensus       441 ~Gd-~DL~kiL~k------~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  441 CGD-IDLNKILKK------KKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAI  509 (677)
T ss_pred             ccc-ccHHHHHHh------ccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence            754 499999972      2233332377889999999999999   99999999999999997 589999999999988


Q ss_pred             CCCc------ccccccccccccc-----------------ccCCCcccHHHHHHHHhhccc-----------cccccccc
Q 045682          214 PEGE------LLTGLRAFDLARL-----------------NEDDGYVALRDHVKKYFEEDR-----------LNEIIDPL  259 (309)
Q Consensus       214 ~~~~------~~~g~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  259 (309)
                      ..+.      .-.|...|..|+.                 ...++.|+++..++.+..+..           +..+.++.
T Consensus       510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~  589 (677)
T KOG0596|consen  510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPN  589 (677)
T ss_pred             CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCC
Confidence            7654      3345555544432                 223467888888877755543           22334443


Q ss_pred             ccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 IMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..-.++..+.   ..++.++|..||..||++|||+.+|++
T Consensus       590 ~~Iefp~~~~---~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  590 HEIEFPDIPE---NDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             ccccccCCCC---chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            3223322221   233999999999999999999999975

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=5.5e-28  Score=204.06  Aligned_cols=220  Identities=20%  Similarity=0.257  Sum_probs=169.6

Q ss_pred             CCeEEEEEEe--CCeEEEEEEecCCCchh-HHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCChhhhhhh
Q 045682           70 SFYTLYKGFC--QERLISVMKFDASKPRM-YDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRI  146 (309)
Q Consensus        70 ~~g~V~~~~~--~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~  146 (309)
                      +||.||+|.+  ++..+++|.+....... .+.+.+|+..+++++|+||+++++++......++++||+++++|.+++. 
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~-   79 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK-   79 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH-
Confidence            5899999999  57999999997765444 6789999999999999999999999999999999999999999999986 


Q ss_pred             hCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC---ccccccc
Q 045682          147 QHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG---ELLTGLR  223 (309)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~g~~  223 (309)
                            ....+++..++.++.+++.++.|||   ..+++|+||+|+||+++.++.++|+|||++......   ....+..
T Consensus        80 ------~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  150 (244)
T smart00220       80 ------KRGRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTP  150 (244)
T ss_pred             ------hccCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCc
Confidence                  2333899999999999999999999   899999999999999999999999999999877553   2233333


Q ss_pred             ccccccc------ccCCCcccHHHHHHHHhhccccc-------ccccccccCCCCCCchHH-HHHHHHHHHHHcccCCCC
Q 045682          224 AFDLARL------NEDDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSCSGKEQ-QLQAYAHLIFECVNESPV  289 (309)
Q Consensus       224 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~-~~~~l~~li~~Cl~~~P~  289 (309)
                      .+..++.      ....+.++++..++.++.+....       .+.+....+......... .+.++.+++.+||..+|+
T Consensus       151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  230 (244)
T smart00220      151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPE  230 (244)
T ss_pred             CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCch
Confidence            3333332      12345566666666665543221       122222222222211111 567899999999999999


Q ss_pred             CCCCHHHHHH
Q 045682          290 DRPTMVDVAK  299 (309)
Q Consensus       290 ~RPt~~~l~~  299 (309)
                      +||++.++++
T Consensus       231 ~Rp~~~~~~~  240 (244)
T smart00220      231 KRLTAEEALQ  240 (244)
T ss_pred             hccCHHHHhh
Confidence            9999999985

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-28  Score=217.14  Aligned_cols=220  Identities=19%  Similarity=0.178  Sum_probs=174.2

Q ss_pred             cCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           63 EKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      .++||.|-||+||-|.+  +|+.||||.+.+.  ......++.+|+.||++++||.||.+.-.|...+..++|||-+.|-
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            57899999999999999  8999999999774  3455678999999999999999999999999999999999999875


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC---CcEEEeecccccccCC
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE---NVAKLFDFSFSISIPE  215 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~a~~~~~  215 (309)
                      -|+-.|.      ...+.+++.....++.||+.||.|||   .++|+|+||||+|||+.+.   -++||||||+|+.+.+
T Consensus       649 MLEMILS------sEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE  719 (888)
T KOG4236|consen  649 MLEMILS------SEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE  719 (888)
T ss_pred             HHHHHHH------hhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence            5555553      35678999999999999999999999   9999999999999999644   4799999999999987


Q ss_pred             Cc---cccccccccccccccCCCcccHHHHHHHHhhcccccccccccccCCCCCC-------------------chHHHH
Q 045682          216 GE---LLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCS-------------------GKEQQL  273 (309)
Q Consensus       216 ~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-------------------~~~~~~  273 (309)
                      ..   ...|.++|.+++.....++. -.-++|      +.+.++...+.|.+|+.                   +-.+.+
T Consensus       720 ksFRrsVVGTPAYLaPEVLrnkGyN-rSLDMW------SVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis  792 (888)
T KOG4236|consen  720 KSFRRSVVGTPAYLAPEVLRNKGYN-RSLDMW------SVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEIS  792 (888)
T ss_pred             hhhhhhhcCCccccCHHHHhhcccc-ccccce------eeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcC
Confidence            65   56788888888766544332 111222      23333444444433332                   223556


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      .+..+||...|+..=.+|-|.++-+
T Consensus       793 ~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  793 PEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             HHHHHHHHHHHHHHHHHhcchHhhc
Confidence            7788999999999999999887654

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.96  E-value=1e-28  Score=205.34  Aligned_cols=153  Identities=20%  Similarity=0.300  Sum_probs=132.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-C-----CeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee-CCc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-Q-----ERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE-TQI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~-----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~  127 (309)
                      ...|+....||+|.||.||+|+- +     ...+|+|+++..+  +.......+|+.+++.++||||+.|..++.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            34588888999999999999976 1     2378999998764  2344567899999999999999999999987 889


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC----CcEE
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE----NVAK  203 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~----~~~k  203 (309)
                      .++++||.+. +|.+.++.|+..  ....++...+..|+.||+.|+.|||   ++=|+||||||.||||..+    |.||
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~--~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VK  176 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRAS--KAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVK  176 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccc--hhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeE
Confidence            9999999987 999998766543  2368999999999999999999999   9999999999999999877    8999


Q ss_pred             EeecccccccCC
Q 045682          204 LFDFSFSISIPE  215 (309)
Q Consensus       204 l~Dfg~a~~~~~  215 (309)
                      |+|||+++.+.+
T Consensus       177 IaDlGlaR~~~~  188 (438)
T KOG0666|consen  177 IADLGLARLFNN  188 (438)
T ss_pred             eecccHHHHhhc
Confidence            999999988743

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.5e-29  Score=238.30  Aligned_cols=235  Identities=16%  Similarity=0.165  Sum_probs=187.6

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecC---CCchhHHHHHHHHHHHhhccCCcceeeeeeeee
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDA---SKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE  124 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  124 (309)
                      ..++.-..++|...++||+|+||.|..+++  +++.+|+|++.+   .+......|+.|=.+|..-+.+.|+.++-.|++
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            344455668899999999999999999999  789999999977   345666789999999999999999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                      +...|+||||++||+|-.+|.       ....+++..+..++..|+-||.-||   +.|+|||||||+|||||..|++||
T Consensus       147 ~~~LYlVMdY~pGGDlltLlS-------k~~~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikL  216 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLS-------KFDRLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKL  216 (1317)
T ss_pred             ccceEEEEecccCchHHHHHh-------hcCCChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEee
Confidence            999999999999999999986       4448999999999999999999999   999999999999999999999999


Q ss_pred             eecccccccCCCc-----ccccccccccccccc-----------CCCcccHHHHHHHHhhccc----------ccccccc
Q 045682          205 FDFSFSISIPEGE-----LLTGLRAFDLARLNE-----------DDGYVALRDHVKKYFEEDR----------LNEIIDP  258 (309)
Q Consensus       205 ~Dfg~a~~~~~~~-----~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~----------~~~~~~~  258 (309)
                      +|||.+-....+.     ...|++-|-.|+...           .=++|+++..+++++.+..          ++.|++.
T Consensus       217 ADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h  296 (1317)
T KOG0612|consen  217 ADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH  296 (1317)
T ss_pred             ccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch
Confidence            9999887766443     344555554443211           1267888888888866543          2234443


Q ss_pred             cccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCC---HHHH
Q 045682          259 LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPT---MVDV  297 (309)
Q Consensus       259 ~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt---~~~l  297 (309)
                      ...-.+|  .....+++..+||..-+. +|+.|..   +.++
T Consensus       297 k~~l~FP--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedi  335 (1317)
T KOG0612|consen  297 KESLSFP--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDI  335 (1317)
T ss_pred             hhhcCCC--cccccCHHHHHHHHHHhc-ChhhhcccccHHHH
Confidence            2222233  334678899999998776 7888876   6555

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.95  E-value=2e-28  Score=202.60  Aligned_cols=231  Identities=18%  Similarity=0.180  Sum_probs=175.5

Q ss_pred             HhcCCCc-cCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeee----CCc
Q 045682           56 ATNNYDS-EKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE----TQI  127 (309)
Q Consensus        56 ~~~~~~~-~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~----~~~  127 (309)
                      .+++|+. ..+||-|-.|.|-.+.+  +++.+|+|.+...     ....+|+++.-.. .|||||.+++++..    ...
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            5666764 35799999999999988  8899999998655     3456788877666 79999999998864    446


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEE
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKL  204 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl  204 (309)
                      +.+|||.++||.|+..++..     ....+++.++..|+.||+.|+.|||   +.+|.||||||+|+|...   |..+||
T Consensus       134 LLiVmE~meGGeLfsriq~~-----g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKL  205 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDR-----GDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKL  205 (400)
T ss_pred             eEeeeecccchHHHHHHHHc-----ccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEe
Confidence            77899999999999998733     4567999999999999999999999   999999999999999954   457899


Q ss_pred             eecccccccCCCc-ccc-cccccccccccc-------CCCcccHHHHHHHHhhcccc----------cccccccccCCCC
Q 045682          205 FDFSFSISIPEGE-LLT-GLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRL----------NEIIDPLIMGDRS  265 (309)
Q Consensus       205 ~Dfg~a~~~~~~~-~~~-g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~g~~~  265 (309)
                      +|||+|+...... +.| -..||+.+....       .-+.|++...++-++.+...          ...-..+..|.+.
T Consensus       206 tDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~  285 (400)
T KOG0604|consen  206 TDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYE  285 (400)
T ss_pred             cccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCcc
Confidence            9999999876432 211 223333322211       12467777777666554432          1223455567665


Q ss_pred             CCch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          266 CSGK--EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       266 ~~~~--~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+  .+.++..+++|+..|..+|.+|.|+.++++
T Consensus       286 FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  286 FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            5543  466888999999999999999999999874

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-28  Score=212.73  Aligned_cols=234  Identities=19%  Similarity=0.235  Sum_probs=168.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-------chhHHHHHHHHHHHhhccCCcceeeeeeee-eCC
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-------PRMYDCCINNIVYASQMIHRCFFKLIGCCL-ETQ  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~-~~~  126 (309)
                      .+.|-...+||+|||+.||+|.+  ..+-||+|+-...+       ....+...+|..|.+.|+||.||++|+++. +..
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            35566678899999999999998  56788999865432       112245678999999999999999999986 556


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEE
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAK  203 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~k  203 (309)
                      .++-|+|||+|.+|+-||+       ....+++..+..|+.||+.||.||... +.+|||.||||.|||+-+   -|.+|
T Consensus       542 sFCTVLEYceGNDLDFYLK-------QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIK  613 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYLK-------QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIK  613 (775)
T ss_pred             cceeeeeecCCCchhHHHH-------hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeE
Confidence            7889999999999999998       677899999999999999999999965 679999999999999943   47799


Q ss_pred             EeecccccccCCCc--------cc---cccccccccc----------cccCCCcccHHHHHHHHhhccc-cc------cc
Q 045682          204 LFDFSFSISIPEGE--------LL---TGLRAFDLAR----------LNEDDGYVALRDHVKKYFEEDR-LN------EI  255 (309)
Q Consensus       204 l~Dfg~a~~~~~~~--------~~---~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~------~~  255 (309)
                      |+|||+++....+.        ++   .|..=|..|+          ..-.-+.|+++..++..+.+.. ++      .+
T Consensus       614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI  693 (775)
T KOG1151|consen  614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI  693 (775)
T ss_pred             eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH
Confidence            99999999876543        11   1111111111          1112255666655555443321 11      11


Q ss_pred             ccc--ccc-CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          256 IDP--LIM-GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       256 ~~~--~~~-g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      +..  ++. .+..+++.+..+.+...+|++||++.-++|....++.
T Consensus       694 LqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  694 LQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             HhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            111  111 1223333345667899999999999988988877764

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.95  E-value=4.6e-27  Score=216.47  Aligned_cols=241  Identities=10%  Similarity=0.116  Sum_probs=161.0

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe------------------CCeEEEEEEecCCCchhHHHH--------------HHH
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC------------------QERLISVMKFDASKPRMYDCC--------------INN  103 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~------------------~~~~vavK~~~~~~~~~~~~~--------------~~e  103 (309)
                      ..++|+..++||+|+||+||+|.+                  .++.||||++........+.|              ..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999964                  236799999876543333333              346


Q ss_pred             HHHHhhccCCcc-----eeeeeeeee--------CCceEEEEEeccCCChhhhhhhhCCC-----------------CCC
Q 045682          104 IVYASQMIHRCF-----FKLIGCCLE--------TQIPILVFEYINCGSLADRIRIQHNP-----------------QPQ  153 (309)
Q Consensus       104 ~~~l~~l~h~ni-----v~l~g~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~~  153 (309)
                      +.++.+++|.++     ++++++|..        .+..+|||||+++++|.++|......                 ...
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            667777766554     677777753        35689999999999999998632110                 011


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCcc-----cccccccccc
Q 045682          154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL-----LTGLRAFDLA  228 (309)
Q Consensus       154 ~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~g~~~~~~~  228 (309)
                      ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++........     .++...|..|
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence            234578889999999999999999   89999999999999999999999999999865433211     1112233333


Q ss_pred             cccc----------------------------CCCcccHHHHHHHHhhcc--cccc--ccc--------------ccccC
Q 045682          229 RLNE----------------------------DDGYVALRDHVKKYFEED--RLNE--IID--------------PLIMG  262 (309)
Q Consensus       229 ~~~~----------------------------~~~~~~~~~~~~~~~~~~--~~~~--~~~--------------~~~~g  262 (309)
                      +...                            ..+.|++...+..++...  .+..  .++              ....+
T Consensus       380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~  459 (507)
T PLN03224        380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ  459 (507)
T ss_pred             hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence            3211                            124555555555554321  0100  000              00111


Q ss_pred             CCCCCchHHHHHHHHHHHHHcccCCC---CCCCCHHHHHH
Q 045682          263 DRSCSGKEQQLQAYAHLIFECVNESP---VDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~~~~~~~~~~l~~li~~Cl~~~P---~~RPt~~~l~~  299 (309)
                      ..........+....+|+..++..+|   .+|+|+.|+++
T Consensus       460 ~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        460 KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            11222222446778999999999766   68999999874

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2e-28  Score=204.72  Aligned_cols=223  Identities=17%  Similarity=0.219  Sum_probs=183.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..++||+|.||.|..++-  +++.+|+|++++.-.   .....-+.|-.+|+..+||.+..|--.++.....++||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            6688899999999999999988  889999999987532   23344567899999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||..||.|.-+|.       ....+++.....+-..|+.||.|||   +.+||+||||.+|+|+|.||.+||+|||+++-
T Consensus       248 eyanGGeLf~HLs-------rer~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE  317 (516)
T KOG0690|consen  248 EYANGGELFFHLS-------RERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKE  317 (516)
T ss_pred             EEccCceEeeehh-------hhhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchh
Confidence            9999999999986       5677888888999999999999999   99999999999999999999999999999975


Q ss_pred             cCC----CccccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPE----GELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~----~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ...    ....+|.+-+.+|+...+.      ++|.++..+++++.+.      .-..++.-++.++..++  ...+++.
T Consensus       318 ~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFP--r~ls~eA  395 (516)
T KOG0690|consen  318 EIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFP--RTLSPEA  395 (516)
T ss_pred             cccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCC--ccCCHHH
Confidence            432    3477899988888876644      3466666667765443      22334455555554433  4667889


Q ss_pred             HHHHHHcccCCCCCCC
Q 045682          277 AHLIFECVNESPVDRP  292 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RP  292 (309)
                      ..|+.-.|..||.+|.
T Consensus       396 ktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  396 KTLLSGLLKKDPKKRL  411 (516)
T ss_pred             HHHHHHHhhcChHhhc
Confidence            9999999999999995

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=7.6e-28  Score=222.30  Aligned_cols=221  Identities=20%  Similarity=0.268  Sum_probs=162.0

Q ss_pred             CCCccCceeecCCeE-EEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEecc
Q 045682           59 NYDSEKVIMKRSFYT-LYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~-V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      -|...+++|.|+.|+ ||+|.+.++.||||++-..   ......+|+..|..- +|||||++|+.-.+++..||..|.|.
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            356677899999986 7999999999999997654   234567999999998 89999999999999999999999998


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---C--CcEEEeeccccc
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---E--NVAKLFDFSFSI  211 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~--~~~kl~Dfg~a~  211 (309)
                      . +|.++++.+..+......   ...+.+..|+++||++||   +.+||||||||+||||+.   +  ..++|+|||+++
T Consensus       587 ~-sL~dlie~~~~d~~~~~~---i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK  659 (903)
T KOG1027|consen  587 C-SLQDLIESSGLDVEMQSD---IDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSK  659 (903)
T ss_pred             h-hHHHHHhccccchhhccc---ccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence            6 999999743111111111   334678899999999999   999999999999999965   3  478999999999


Q ss_pred             ccCCCc-------cccccccccccccccCCCcccHHHHHHHHhhcccccccccccccCCCCCCc----------------
Q 045682          212 SIPEGE-------LLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSG----------------  268 (309)
Q Consensus       212 ~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------------  268 (309)
                      ....+.       -.+|...+.+|+.........       ..+-.+++.++...+.|..-+-+                
T Consensus       660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~-------avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L  732 (903)
T KOG1027|consen  660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQ-------AVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTL  732 (903)
T ss_pred             ccCCCcchhhcccCCCCcccccCHHHHhccccCc-------ccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccce
Confidence            886653       344555555555433222211       11122344455544444221111                


Q ss_pred             -----hHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          269 -----KEQQLQAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       269 -----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                           ..++  +..+||.++++++|..||++.+|+
T Consensus       733 ~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  733 VHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             eeeccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence                 0112  788999999999999999999986

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.3e-29  Score=205.10  Aligned_cols=149  Identities=21%  Similarity=0.354  Sum_probs=127.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEec--CCCchhHHHHHHHHHHHhhccCCcceeeeeeeee--------C
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFD--ASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--------T  125 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--------~  125 (309)
                      +.|....+||+|.||.||+|+.  +++.||+|+.-  ..+.......++|+++|..+.|+|++.++..|..        .
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            3466677899999999999998  77889998753  3344555667899999999999999999998853        2


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ...|+|+.+|+. +|...|.      +....++...+.+++.++..||.|+|   ...|+|||+||+|+||+.+|.+||+
T Consensus        97 ~t~ylVf~~ceh-DLaGlLs------n~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklA  166 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLS------NRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLA  166 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhc------CccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEee
Confidence            358999999987 8998875      34467899999999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCC
Q 045682          206 DFSFSISIPEG  216 (309)
Q Consensus       206 Dfg~a~~~~~~  216 (309)
                      |||+++.+...
T Consensus       167 DFGlar~fs~~  177 (376)
T KOG0669|consen  167 DFGLARAFSTS  177 (376)
T ss_pred             ccccccceecc
Confidence            99999766443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=2.9e-26  Score=188.94  Aligned_cols=199  Identities=22%  Similarity=0.321  Sum_probs=159.0

Q ss_pred             eeecCCeEEEEEEeC--CeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCChhh
Q 045682           66 IMKRSFYTLYKGFCQ--ERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLAD  142 (309)
Q Consensus        66 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~  142 (309)
                      ||+|++|.||++...  +..+++|.+...... ....+.+|+..+..+.|++|+++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            689999999999994  899999998776432 34679999999999999999999999999899999999999999999


Q ss_pred             hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-CCcEEEeecccccccCCCc----
Q 045682          143 RIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLFDFSFSISIPEGE----  217 (309)
Q Consensus       143 ~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~----  217 (309)
                      ++..      ....+++..+..++.++++++.|||   ..+++|+||+|.||+++. ++.++|+|||.+.......    
T Consensus        81 ~~~~------~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~  151 (215)
T cd00180          81 LLKE------NEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLK  151 (215)
T ss_pred             HHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhh
Confidence            9861      1147899999999999999999999   899999999999999999 8999999999987664431    


Q ss_pred             cccccccccccccccC-------CCcccHHHHHHHHhhcccccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCC
Q 045682          218 LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVD  290 (309)
Q Consensus       218 ~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~  290 (309)
                      ...+...+..++....       .+.+.++..++.+                           ..+.+++..|++.+|++
T Consensus       152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------~~~~~~l~~~l~~~p~~  204 (215)
T cd00180         152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------PELKDLIRKMLQKDPEK  204 (215)
T ss_pred             cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------HHHHHHHHHHhhCCccc
Confidence            1222223322222111       1222222222221                           67899999999999999


Q ss_pred             CCCHHHHHHH
Q 045682          291 RPTMVDVAKK  300 (309)
Q Consensus       291 RPt~~~l~~~  300 (309)
                      ||++.++++.
T Consensus       205 R~~~~~l~~~  214 (215)
T cd00180         205 RPSAKEILEH  214 (215)
T ss_pred             CcCHHHHhhC
Confidence            9999999864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.94  E-value=5.7e-27  Score=220.53  Aligned_cols=151  Identities=19%  Similarity=0.220  Sum_probs=106.9

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--C----CeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeee------ee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--Q----ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGC------CL  123 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~------~~  123 (309)
                      ..++|+..+.||+|+||.||+|++  +    +..||+|++.....  .+.+.++  .+....+.+++.+...      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            567899999999999999999999  5    68999999765421  1222222  1122223333322222      24


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCC
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNPQ-------------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFK  190 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlk  190 (309)
                      .+...++||||+++++|.+++.......             ..........+..++.|++.||.|||   +.+|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence            5668999999999999999985221000             00111123445689999999999999   8999999999


Q ss_pred             CCCeeecC-CCcEEEeeccccccc
Q 045682          191 LSNILFNE-ENVAKLFDFSFSISI  213 (309)
Q Consensus       191 p~Nill~~-~~~~kl~Dfg~a~~~  213 (309)
                      |+|||++. ++.+||+|||+|+..
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l  306 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADL  306 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCcccc
Confidence            99999985 589999999999754

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-27  Score=188.39  Aligned_cols=188  Identities=16%  Similarity=0.175  Sum_probs=155.6

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCce
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  128 (309)
                      ++...+.......||+|++|.|-+-++  +|...|+|++... ..+..++.++|+.+..+. .+|.+|.+||....++..
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            445556666778899999999988887  8999999998765 345557788899887777 899999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++.||.|+. ||..|-...-   ..+..+++..+-+|+..+.+||.|||+  ...+||||+||+||||+.+|+||+||||
T Consensus       121 wIcME~M~t-Sldkfy~~v~---~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFG  194 (282)
T KOG0984|consen  121 WICMELMDT-SLDKFYRKVL---KKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFG  194 (282)
T ss_pred             EEeHHHhhh-hHHHHHHHHH---hcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccc
Confidence            999999976 8888764321   257789999999999999999999997  7899999999999999999999999999


Q ss_pred             cccccCCCc---cccccccccccccccC---CCcccHHHHHHHH
Q 045682          209 FSISIPEGE---LLTGLRAFDLARLNED---DGYVALRDHVKKY  246 (309)
Q Consensus       209 ~a~~~~~~~---~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~  246 (309)
                      ++....++-   +-+|-.||.+++....   ...++..+++|++
T Consensus       195 IsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSL  238 (282)
T KOG0984|consen  195 ISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSL  238 (282)
T ss_pred             cceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhh
Confidence            998776553   4679999988876442   2256677777765

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.94  E-value=9.2e-28  Score=208.44  Aligned_cols=229  Identities=17%  Similarity=0.213  Sum_probs=181.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      -+.|..-.+||+||||.||-+..  +|+-+|.|++.+.   ........++|-.+|.+++.+.||.+--++.+.+..++|
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            35688888999999999998877  8999999988553   223345578999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      +..|+||+|.-+|-.+     ....+++..+..++.+|+-||.+||   ..+||+|||||+|||+|+.|+++|+|.|+|.
T Consensus       264 LtlMNGGDLkfHiyn~-----g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAv  335 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNH-----GNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAV  335 (591)
T ss_pred             EEeecCCceeEEeecc-----CCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEE
Confidence            9999999999888633     3467999999999999999999999   9999999999999999999999999999999


Q ss_pred             ccCCCccccc---cccccccccccC------CCcccHHHHHHHHhhccccc---------ccccccccCCCCCCchHHHH
Q 045682          212 SIPEGELLTG---LRAFDLARLNED------DGYVALRDHVKKYFEEDRLN---------EIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       212 ~~~~~~~~~g---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~~~  273 (309)
                      .++.++..+|   +..|.+|+....      .++|+++..+++++.+.+..         +-+|....... -..+...+
T Consensus       336 ei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~-~ey~~kFS  414 (591)
T KOG0986|consen  336 EIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP-EEYSDKFS  414 (591)
T ss_pred             ecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch-hhcccccC
Confidence            9988876554   555666654332      35566666667776654332         12333322221 11224678


Q ss_pred             HHHHHHHHHcccCCCCCCCCH
Q 045682          274 QAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~  294 (309)
                      ++..+|.+..|..||++|.-.
T Consensus       415 ~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  415 EEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             HHHHHHHHHHHccCHHHhccC
Confidence            889999999999999999644

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.1e-27  Score=212.57  Aligned_cols=224  Identities=20%  Similarity=0.198  Sum_probs=172.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++.|.....+|.|+|+.|-.+.+  +++..++|++....    .+-.+|+.++... +||||+++.+.+.+....|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            56788888899999999999998  78999999997762    2234677666666 89999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee-cCCCcEEEeecccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF-NEENVAKLFDFSFSIS  212 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill-~~~~~~kl~Dfg~a~~  212 (309)
                      ++.++-+.+.+.        ..+.....+..|+.+|+.|+.|||   ..++|||||||+|||+ ++.++++|+|||.++.
T Consensus       397 ~l~g~ell~ri~--------~~~~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~  465 (612)
T KOG0603|consen  397 LLDGGELLRRIR--------SKPEFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSE  465 (612)
T ss_pred             hccccHHHHHHH--------hcchhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhh
Confidence            999997777764        233333677889999999999999   9999999999999999 6999999999999998


Q ss_pred             cCCCccc-ccccccccc------ccccCCCcccHHHHHHHHhhccccc-------ccccccccCCCCCCchHHHHHHHHH
Q 045682          213 IPEGELL-TGLRAFDLA------RLNEDDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       213 ~~~~~~~-~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ....-.. +-..-|.+|      +..+.-+.|+++...+.++.+....       ++...+..|...    ...+.+.++
T Consensus       466 ~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s----~~vS~~AKd  541 (612)
T KOG0603|consen  466 LERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS----ECVSDEAKD  541 (612)
T ss_pred             CchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc----cccCHHHHH
Confidence            8765100 001111222      2233446777777777776665432       344444444333    467788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      |++.||+.||.+||+|.++..
T Consensus       542 Ll~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  542 LLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHHHhccCChhhCcChhhhcc
Confidence            999999999999999999863

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=7.6e-28  Score=217.42  Aligned_cols=234  Identities=18%  Similarity=0.239  Sum_probs=181.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +.++|+....+|.|.||.||++++  ++...|+|.++........-...|+-+++.++|||||.++|.+..+...|++||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            457888899999999999999999  889999999998877777888899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      ||.+|+|.+.-+       ..+++++.++..+.+...+|++|||   +.+-+|||||-.|||+++.|.+|++|||.+-.+
T Consensus        93 ycgggslQdiy~-------~TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqi  162 (829)
T KOG0576|consen   93 YCGGGSLQDIYH-------VTGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQI  162 (829)
T ss_pred             ecCCCcccceee-------ecccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhh
Confidence            999999999865       6788999999999999999999999   999999999999999999999999999987665


Q ss_pred             CCC----cccccccccccccccc--CCCcccHHHHHHHH--------------hhcccccccccccccCCCCC--CchHH
Q 045682          214 PEG----ELLTGLRAFDLARLNE--DDGYVALRDHVKKY--------------FEEDRLNEIIDPLIMGDRSC--SGKEQ  271 (309)
Q Consensus       214 ~~~----~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~g~~~~--~~~~~  271 (309)
                      ...    .-..|++.+.+++...  ....+....++|..              |.-......+-.-..|.-++  .....
T Consensus       163 tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~k  242 (829)
T KOG0576|consen  163 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTK  242 (829)
T ss_pred             hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCcc
Confidence            432    3455666666665432  11112222222221              11111111111111111111  13346


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.+.++++.|+-++|++|||+..+++
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee
Confidence            7788999999999999999999987754

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.94  E-value=4.4e-26  Score=219.30  Aligned_cols=147  Identities=22%  Similarity=0.229  Sum_probs=132.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|++....   ......+..|+.++..++||||+++++++......++||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5688889999999999999999  58999999986542   233467889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+.+++|.+++.       ....+++..++.++.||+.||.|||   ..+|+||||||+|||++.++.+||+|||+++.
T Consensus        84 Ey~~g~~L~~li~-------~~~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~  153 (669)
T cd05610          84 EYLIGGDVKSLLH-------IYGYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV  153 (669)
T ss_pred             eCCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence            9999999999986       3456889999999999999999999   89999999999999999999999999999986


Q ss_pred             cC
Q 045682          213 IP  214 (309)
Q Consensus       213 ~~  214 (309)
                      ..
T Consensus       154 ~~  155 (669)
T cd05610         154 TL  155 (669)
T ss_pred             cc
Confidence            53

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=5.6e-26  Score=204.41  Aligned_cols=146  Identities=16%  Similarity=0.135  Sum_probs=129.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .-|...+.||-|+||.|..++-  +...+|+|.+.+.+   .........|-.||...+.+.||+||-.|.+...+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            4588889999999999999987  56778999987654   223344667889999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      +|++||++-.+|.       ..+.+.+..+..++..+..|+++.|   ..++|||||||.|||||.+|.+||+||||+..
T Consensus       709 dYIPGGDmMSLLI-------rmgIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG  778 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLI-------RMGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  778 (1034)
T ss_pred             eccCCccHHHHHH-------HhccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeecccccc
Confidence            9999999999987       5677888888999999999999999   99999999999999999999999999999865


Q ss_pred             c
Q 045682          213 I  213 (309)
Q Consensus       213 ~  213 (309)
                      +
T Consensus       779 f  779 (1034)
T KOG0608|consen  779 F  779 (1034)
T ss_pred             c
Confidence            4

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=3.6e-25  Score=195.99  Aligned_cols=142  Identities=17%  Similarity=0.175  Sum_probs=114.9

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe---CCeEEEEEEecCC-----CchhHHHHHHHHHHHhhccCCccee-eeeeee
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC---QERLISVMKFDAS-----KPRMYDCCINNIVYASQMIHRCFFK-LIGCCL  123 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~-l~g~~~  123 (309)
                      .....++|...+.||+|+||+||+|.+   +++.||||++...     .......|.+|+++|.+++|+|++. ++++  
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--   90 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--   90 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence            344567799999999999999999987   4677899986533     1223456899999999999999985 4432  


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCC-CCCCeeecCCCcE
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF-KLSNILFNEENVA  202 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dl-kp~Nill~~~~~~  202 (309)
                        +..++||||+++++|... .       ...      ...++.+++.||.|||   +.+|+|||| ||+|||++.++.+
T Consensus        91 --~~~~LVmE~~~G~~L~~~-~-------~~~------~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~i  151 (365)
T PRK09188         91 --GKDGLVRGWTEGVPLHLA-R-------PHG------DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEA  151 (365)
T ss_pred             --CCcEEEEEccCCCCHHHh-C-------ccc------hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCE
Confidence              457999999999999732 1       111      1467899999999999   999999999 9999999999999


Q ss_pred             EEeecccccccCC
Q 045682          203 KLFDFSFSISIPE  215 (309)
Q Consensus       203 kl~Dfg~a~~~~~  215 (309)
                      ||+|||+|+....
T Consensus       152 kLiDFGlA~~~~~  164 (365)
T PRK09188        152 AVIDFQLASVFRR  164 (365)
T ss_pred             EEEECccceeccc
Confidence            9999999986543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.92  E-value=8.8e-26  Score=180.56  Aligned_cols=145  Identities=17%  Similarity=0.286  Sum_probs=125.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeee--CCceEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE--TQIPIL  130 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~--~~~~~l  130 (309)
                      ..++|+....+|.|.++.||.|+.  +.+.++||.+++-+   .+.+.+|+++|..+ .||||++++++..+  ...+.|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            346788888999999999999997  78899999987753   46688999999999 59999999999876  456889


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-CcEEEeeccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-NVAKLFDFSF  209 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~  209 (309)
                      |+||+.+.+....          ...++...+..++.+++.||.|||   +.||+|||+||.|++||.. -.++|+|+|+
T Consensus       113 iFE~v~n~Dfk~l----------y~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGL  179 (338)
T KOG0668|consen  113 IFEYVNNTDFKQL----------YPTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGL  179 (338)
T ss_pred             HhhhhccccHHHH----------hhhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecch
Confidence            9999998777765          346888889999999999999999   9999999999999999865 4689999999


Q ss_pred             ccccCCC
Q 045682          210 SISIPEG  216 (309)
Q Consensus       210 a~~~~~~  216 (309)
                      |-..-++
T Consensus       180 AEFYHp~  186 (338)
T KOG0668|consen  180 AEFYHPG  186 (338)
T ss_pred             HhhcCCC
Confidence            8665444

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.92  E-value=1.6e-25  Score=199.63  Aligned_cols=179  Identities=15%  Similarity=0.196  Sum_probs=151.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--------hhHHHHHHHHHHHhhcc---CCcceeeeeeeee
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--------RMYDCCINNIVYASQMI---HRCFFKLIGCCLE  124 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~  124 (309)
                      .+|+....+|+|+||.|+.|++  +...|++|.+.+...        ...-.+-.||.||..++   |+||++++++|.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            4578889999999999999999  567889998866431        11122557999999997   9999999999999


Q ss_pred             CCceEEEEEecc-CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEE
Q 045682          125 TQIPILVFEYIN-CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       125 ~~~~~lv~e~~~-~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~k  203 (309)
                      ++.+||+||--. +.+|++|+.       ....+++..+.-|+.||+.|+++||   +.+|||||||-+|+.++.+|-+|
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE-------~kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~k  710 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIE-------FKPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVK  710 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhh-------ccCccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEE
Confidence            999999999874 559999997       5678999999999999999999999   99999999999999999999999


Q ss_pred             EeecccccccCCC--ccccccccccccccccCCCcccHHHHHHHH
Q 045682          204 LFDFSFSISIPEG--ELLTGLRAFDLARLNEDDGYVALRDHVKKY  246 (309)
Q Consensus       204 l~Dfg~a~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  246 (309)
                      |+|||.|....++  ....|...|.+|+...+..+..-..++|.+
T Consensus       711 lidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwal  755 (772)
T KOG1152|consen  711 LIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWAL  755 (772)
T ss_pred             EeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhh
Confidence            9999998776554  467788888888887776666666666653

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.92  E-value=7.6e-25  Score=178.61  Aligned_cols=138  Identities=13%  Similarity=0.108  Sum_probs=108.8

Q ss_pred             cCceeecCCeEEEEEEe-CCeEEEEEEecCCCch--h-------HHH-----------------HHHHHHHHhhccCCcc
Q 045682           63 EKVIMKRSFYTLYKGFC-QERLISVMKFDASKPR--M-------YDC-----------------CINNIVYASQMIHRCF  115 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~--~-------~~~-----------------~~~e~~~l~~l~h~ni  115 (309)
                      ...||+|+||.||+|.. +|+.||+|.++.....  .       ...                 ...|+.++..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            35799999999999998 8999999998664211  1       011                 2349999999988877


Q ss_pred             eeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEeCCCCCCCe
Q 045682          116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL-HVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       116 v~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yL-H~~~~~~iiH~dlkp~Ni  194 (309)
                      .....+..  ...+|||||++++++.....       ....+++.....++.|++.+|.|+ |   ..+|+||||||+||
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~-------~~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NI  149 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL-------KDAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNL  149 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcchhh-------hcCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHE
Confidence            54443322  23489999999987765532       245788999999999999999999 7   88999999999999


Q ss_pred             eecCCCcEEEeeccccccc
Q 045682          195 LFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~  213 (309)
                      |++ ++.++|+|||+|...
T Consensus       150 li~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         150 LYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             EEE-CCcEEEEEccccccC
Confidence            998 578999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=3e-26  Score=187.73  Aligned_cols=149  Identities=17%  Similarity=0.238  Sum_probs=129.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-----ce
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-----IP  128 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~  128 (309)
                      .+.+...-||.|+||.||.+++  +|+.||.|++..-  .-...+.+.+|+++|..++|.|+...+++.....     +.
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            4566788899999999999999  8999999998653  2234477899999999999999999998876543     57


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      |+++|.+.. +|...+-       ....++...+.-++.||++||.|||   +.+|.||||||.|.|+++|-.+||||||
T Consensus       133 YV~TELmQS-DLHKIIV-------SPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFG  201 (449)
T KOG0664|consen  133 YVLTELMQS-DLHKIIV-------SPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFG  201 (449)
T ss_pred             HHHHHHHHh-hhhheec-------cCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccc
Confidence            889999876 8888875       6788999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCc
Q 045682          209 FSISIPEGE  217 (309)
Q Consensus       209 ~a~~~~~~~  217 (309)
                      +++....++
T Consensus       202 LARvee~d~  210 (449)
T KOG0664|consen  202 LARTWDQRD  210 (449)
T ss_pred             cccccchhh
Confidence            998775543

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.2e-26  Score=202.38  Aligned_cols=226  Identities=15%  Similarity=0.170  Sum_probs=186.5

Q ss_pred             cCCCccCceeecCCeEEEEEEeCCeE--EEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQERL--ISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~~~~--vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .++.....||-||||.|-.+..+++.  +|+|.+++.   +....+.+.+|-.+|.+++.|.||++|--|.+....|++|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            33444556999999999999885544  788888664   3445566889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |-|-||.|-..|.       ..+.++......++..++.|+.|||   .++||+|||||+|++++.+|-+||.|||+|+.
T Consensus       500 EaClGGElWTiLr-------dRg~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKk  569 (732)
T KOG0614|consen  500 EACLGGELWTILR-------DRGSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKK  569 (732)
T ss_pred             HhhcCchhhhhhh-------hcCCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHH
Confidence            9999999999997       6788999999999999999999999   99999999999999999999999999999999


Q ss_pred             cCCCc---cccccccccccccccC------CCcccHHHHHHHHhhccccccccc------ccccCCCCCCchHHHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIID------PLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~l~  277 (309)
                      +..+.   .++|.+-|-+|+...+      -++|.++..+++++.+.+...-.|      .++.|-.....|........
T Consensus       570 i~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~  649 (732)
T KOG0614|consen  570 IGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTAT  649 (732)
T ss_pred             hccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHH
Confidence            87765   6778888888876543      357788888888877665544444      34445444444456677788


Q ss_pred             HHHHHcccCCCCCCCC
Q 045682          278 HLIFECVNESPVDRPT  293 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt  293 (309)
                      +||.+.+..+|.+|.-
T Consensus       650 ~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  650 DLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHHHhcCcHhhhc
Confidence            9999999999999964

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.1e-25  Score=191.96  Aligned_cols=224  Identities=17%  Similarity=0.218  Sum_probs=175.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  130 (309)
                      ..+|....+||+|+||.|..|..  +.+.+|||+++..-   ..+.+--+.|-++|..- .-|.++++..+++.-+.+|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            35688899999999999999988  56889999987753   23334456777777776 67899999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+.||+|--.++       +-+.+.++.+.-+|..||-||-|||   +++||+||||..||++|.+|.+||+|||++
T Consensus       428 VMEyvnGGDLMyhiQ-------Q~GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmc  497 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQ-------QVGKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC  497 (683)
T ss_pred             EEEEecCchhhhHHH-------HhcccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccc
Confidence            999999999999987       6678889999999999999999999   999999999999999999999999999999


Q ss_pred             cccCC----CccccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHH
Q 045682          211 ISIPE----GELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       211 ~~~~~----~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      +--.-    ....+|.+.|-+++.....      ++|++....++++.+.      .-.+++..+......  .|...+.
T Consensus       498 KEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs--yPKslSk  575 (683)
T KOG0696|consen  498 KENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS--YPKSLSK  575 (683)
T ss_pred             cccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc--CcccccH
Confidence            75422    3366788888777654433      3444444445554332      223444444433332  2346678


Q ss_pred             HHHHHHHHcccCCCCCCC
Q 045682          275 AYAHLIFECVNESPVDRP  292 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RP  292 (309)
                      +...+...-+.+.|.+|.
T Consensus       576 EAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  576 EAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             HHHHHHHHHhhcCCcccc
Confidence            889999999999999995

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=183.08  Aligned_cols=227  Identities=18%  Similarity=0.235  Sum_probs=178.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  129 (309)
                      ..++|....+||.|+|+.|-.+++  +.+.+|+|.+++.   ...+.+-...|-.+..+. +||.+|.+..+++.+...+
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            346789999999999999999999  7899999998764   345556667777777777 8999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +|.||++||+|--+++       .+..++++.+..+...|+-||.|||   +++||+||||..|+|+|.+|.+||+|+|+
T Consensus       328 fvieyv~ggdlmfhmq-------rqrklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygm  397 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQ-------RQRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGM  397 (593)
T ss_pred             EEEEEecCcceeeehh-------hhhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccch
Confidence            9999999999998887       7889999999999999999999999   99999999999999999999999999999


Q ss_pred             cccc----CCCccccccccccccccccCCCc------ccHHHHHHHHhhcccccccccccccC------------CCCCC
Q 045682          210 SISI----PEGELLTGLRAFDLARLNEDDGY------VALRDHVKKYFEEDRLNEIIDPLIMG------------DRSCS  267 (309)
Q Consensus       210 a~~~----~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g------------~~~~~  267 (309)
                      ++..    ......+|.+.+-+++...+.++      |.+...+.+++.+.+..+++-..-..            +....
T Consensus       398 cke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir  477 (593)
T KOG0695|consen  398 CKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR  477 (593)
T ss_pred             hhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence            8754    22346788888888887766543      44444445555565555544311100            00111


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCC
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRP  292 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RP  292 (309)
                      .|...+.....++..-+++||.+|.
T Consensus       478 iprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  478 IPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             ccceeehhhHHHHHHhhcCCcHHhc
Confidence            1223345566788899999999985

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.91  E-value=1.3e-23  Score=171.70  Aligned_cols=140  Identities=13%  Similarity=0.156  Sum_probs=111.2

Q ss_pred             cCceeecCCeEEEEEEe-CCeEEEEEEecCCCchh--------------------------HHHHHHHHHHHhhccCCcc
Q 045682           63 EKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRM--------------------------YDCCINNIVYASQMIHRCF  115 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~h~ni  115 (309)
                      ...||+|+||.||+|.. +|+.||||.+.......                          ...+..|+..+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            45799999999999998 79999999987642110                          1123578999999999988


Q ss_pred             eeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCe
Q 045682          116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNI  194 (309)
Q Consensus       116 v~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Ni  194 (309)
                      .....+...  ..+|||||++++++.....       ....++......++.|++.++.++|   . .+|+||||||+||
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l-------~~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NI  149 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL-------KDVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNI  149 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhh-------hhccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhE
Confidence            554444333  2489999999886544321       2346788889999999999999999   7 9999999999999


Q ss_pred             eecCCCcEEEeecccccccCC
Q 045682          195 LFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~~~  215 (309)
                      +++ ++.++|+|||++...+.
T Consensus       150 ll~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         150 LYH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             EEE-CCCEEEEEcccceecCC
Confidence            999 89999999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.5e-23  Score=171.74  Aligned_cols=233  Identities=15%  Similarity=0.176  Sum_probs=161.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeee-eeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGC-CLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~-~~~~~~~~lv~e  133 (309)
                      +.|...+.||+|-||.+-.+.+  +.+.+++|-+.... ...++|.+|...--.| .|.||+..|++ |+..+.+.+++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            5688888999999999999999  56888999876654 3457899999887777 79999988865 455667788999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee-c-CCCcEEEeeccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF-N-EENVAKLFDFSFSI  211 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill-~-~~~~~kl~Dfg~a~  211 (309)
                      |++.|+|..-+.        ...+.+....+++.|+++|+.|+|   ++++||||||.+|||| + +...+||||||+.+
T Consensus       103 ~aP~gdL~snv~--------~~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~  171 (378)
T KOG1345|consen  103 FAPRGDLRSNVE--------AAGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTR  171 (378)
T ss_pred             cCccchhhhhcC--------cccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeeccccc
Confidence            999999999873        467888888999999999999999   9999999999999999 2 34589999999987


Q ss_pred             ccCCCc-ccccccccccccccc----CCCcccHHHHHHHHhhcccccccccccccCCCCCC-------------------
Q 045682          212 SIPEGE-LLTGLRAFDLARLNE----DDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCS-------------------  267 (309)
Q Consensus       212 ~~~~~~-~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-------------------  267 (309)
                      .....- ...-.-++..++...    +.-......++|.      ++-++...+.|..|++                   
T Consensus       172 k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~Wq------fGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk  245 (378)
T KOG1345|consen  172 KVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQ------FGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK  245 (378)
T ss_pred             ccCceehhhhhhcccCCcHHHhhccccceEecccccchh------eeeeeeeeecCCCcchhhhccCchHHHHHHHhccc
Confidence            654321 000011111111100    0000111111111      1112222222222221                   


Q ss_pred             ------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          268 ------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       268 ------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                            .....++.+..+-.+-+.++|++|--..++.++...++..|
T Consensus       246 ~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~  292 (378)
T KOG1345|consen  246 NPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK  292 (378)
T ss_pred             CccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence                  11133466777888889999999988888887777777654

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.90  E-value=1.6e-23  Score=178.69  Aligned_cols=149  Identities=17%  Similarity=0.229  Sum_probs=123.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cC-C----cceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IH-R----CFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h-~----niv~l~g~~~~~~~~  128 (309)
                      ++.|.....+|+|.||.|-.+.+  ++..||+|+++.-. ...+..+-|+.+|.++ .+ |    -+|.+.+++.-.+..
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            67799999999999999999988  67899999987654 3335567799999999 22 2    357788889889999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC----------
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE----------  198 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~----------  198 (309)
                      ++|+|.+. .|+.+||.     .+...+.+...+..|+.|++++++|||   +..++|-||||+|||+.+          
T Consensus       167 CivfellG-~S~~dFlk-----~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k  237 (415)
T KOG0671|consen  167 CIVFELLG-LSTFDFLK-----ENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPK  237 (415)
T ss_pred             EEEEeccC-hhHHHHhc-----cCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccC
Confidence            99999884 49999997     346677889999999999999999999   999999999999999832          


Q ss_pred             ----------CCcEEEeecccccccCC
Q 045682          199 ----------ENVAKLFDFSFSISIPE  215 (309)
Q Consensus       199 ----------~~~~kl~Dfg~a~~~~~  215 (309)
                                +-.++|+|||-|.....
T Consensus       238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e  264 (415)
T KOG0671|consen  238 KKVCFIRPLKSTAIKVIDFGSATFDHE  264 (415)
T ss_pred             CccceeccCCCcceEEEecCCcceecc
Confidence                      12589999998876543

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.90  E-value=2.5e-22  Score=167.80  Aligned_cols=147  Identities=25%  Similarity=0.349  Sum_probs=131.8

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      |...+.||.|++|.||++..  ++..+++|.+...... ..+.+.+|+..+..++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            45567899999999999999  4799999999876544 56789999999999999999999999999899999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          137 CGSLADRIRIQHNPQPQHEP-LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~-l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      +++|.+++.       .... +++..+..++.+++.++.|||   ..+++|+|++|.||+++.++.++|+|||++.....
T Consensus        81 ~~~L~~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~  150 (225)
T smart00221       81 GGDLFDYLR-------KKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHR  150 (225)
T ss_pred             CCCHHHHHH-------hcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence            999999986       2233 899999999999999999999   88999999999999999999999999999887654


Q ss_pred             C
Q 045682          216 G  216 (309)
Q Consensus       216 ~  216 (309)
                      .
T Consensus       151 ~  151 (225)
T smart00221      151 D  151 (225)
T ss_pred             c
Confidence            3

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PRK10345 hypothetical protein; Provisional

Probab=99.89  E-value=1.8e-22  Score=166.20  Aligned_cols=137  Identities=9%  Similarity=0.026  Sum_probs=107.0

Q ss_pred             CCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc-----cCCcceeeeeeeeeCC---c-eEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-----IHRCFFKLIGCCLETQ---I-PIL  130 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~g~~~~~~---~-~~l  130 (309)
                      ++....||+|+||.||.-..+... +||++........+.+.+|+.++..+     +||||++++|++.++.   . ..+
T Consensus         4 L~~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             cCCcceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            445678999999999961114444 68988765445567899999999999     5799999999998763   3 337


Q ss_pred             EEEe--ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCCCeEeCCCCCCCeeecC----CCcEE
Q 045682          131 VFEY--INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI-AYLHVGFPRPVIFRDFKLSNILFNE----ENVAK  203 (309)
Q Consensus       131 v~e~--~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l-~yLH~~~~~~iiH~dlkp~Nill~~----~~~~k  203 (309)
                      |+||  +.+|+|.++++       . ..+++.  ..++.+++.++ .|||   +.+|+||||||+|||++.    ++.++
T Consensus        83 I~e~~G~~~~tL~~~l~-------~-~~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~  149 (210)
T PRK10345         83 IADFDGKPSITLTEFAE-------Q-CRYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPV  149 (210)
T ss_pred             EecCCCCcchhHHHHHH-------c-ccccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEE
Confidence            8999  55799999996       2 235555  35678888887 9999   999999999999999974    34899


Q ss_pred             Eeecccc
Q 045682          204 LFDFSFS  210 (309)
Q Consensus       204 l~Dfg~a  210 (309)
                      |+||+.+
T Consensus       150 LiDg~G~  156 (210)
T PRK10345        150 VCDNIGE  156 (210)
T ss_pred             EEECCCC
Confidence            9995444

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.88  E-value=1.2e-22  Score=169.76  Aligned_cols=145  Identities=21%  Similarity=0.233  Sum_probs=123.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC------Cc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET------QI  127 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~~  127 (309)
                      ..|.....+|.|.- .|..+.+  .+++||+|+....  .....++..+|...+..+.|+||++++.++...      .+
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            45666777888888 6777777  8899999987553  234557778999999999999999999999754      36


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .|+|||++.. +|.+.+.         ..++-.....++.|++.|+.|||   +.+|+||||||+||++..+..+||.||
T Consensus        96 ~y~v~e~m~~-nl~~vi~---------~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~df  162 (369)
T KOG0665|consen   96 VYLVMELMDA-NLCQVIL---------MELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDF  162 (369)
T ss_pred             HHHHHHhhhh-HHHHHHH---------HhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccc
Confidence            8999999975 9998864         45778888999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCC
Q 045682          208 SFSISIPEG  216 (309)
Q Consensus       208 g~a~~~~~~  216 (309)
                      |+|+....+
T Consensus       163 g~ar~e~~~  171 (369)
T KOG0665|consen  163 GLARTEDTD  171 (369)
T ss_pred             hhhcccCcc
Confidence            999876554

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.87  E-value=3.8e-22  Score=176.32  Aligned_cols=152  Identities=19%  Similarity=0.219  Sum_probs=129.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc------CCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI------HRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~g~~~~~~~~  128 (309)
                      -+.|.+....|+|-|++|.+|.+  .|..||||++.... ...+.=+.|+++|++|+      --+.++|+-.|...+.+
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL  509 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL  509 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence            35577777789999999999999  78899999997764 33455678999999994      34789999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeec
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDF  207 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Df  207 (309)
                      +||+|-+.- +|.+.|+..+    ....|....+..++.|+.-||..|-   ..+|+|.||||.||||++.. .+|||||
T Consensus       510 ClVFE~Lsl-NLRevLKKyG----~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDf  581 (752)
T KOG0670|consen  510 CLVFEPLSL-NLREVLKKYG----RNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDF  581 (752)
T ss_pred             EEEehhhhc-hHHHHHHHhC----cccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccC
Confidence            999998875 9999997553    4556788889999999999999999   99999999999999998765 5799999


Q ss_pred             ccccccCCCc
Q 045682          208 SFSISIPEGE  217 (309)
Q Consensus       208 g~a~~~~~~~  217 (309)
                      |.|.....++
T Consensus       582 GSA~~~~ene  591 (752)
T KOG0670|consen  582 GSASFASENE  591 (752)
T ss_pred             cccccccccc
Confidence            9988776665

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.86  E-value=4.7e-21  Score=159.34  Aligned_cols=134  Identities=19%  Similarity=0.205  Sum_probs=114.4

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCCch--------hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPR--------MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +.||+|++|.||+|.+.+..|++|........        ....+.+|+.++..+.|++++....++......+++|||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            46899999999999998889999986543211        1245788999999999999988777777778889999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      +|++|.+++.       ...   + .+..++.+++.+|.++|   ..+++|+|++|.|||++ ++.++|+|||.+..
T Consensus        82 ~G~~L~~~~~-------~~~---~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         82 EGEPLKDLIN-------SNG---M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCcCHHHHHH-------hcc---H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9999999975       111   1 77899999999999999   99999999999999999 88999999998864

>smart00090 RIO RIO-like kinase

Probab=99.86  E-value=6.3e-21  Score=160.67  Aligned_cols=140  Identities=14%  Similarity=0.129  Sum_probs=110.5

Q ss_pred             CCCccCceeecCCeEEEEEE-e--CCeEEEEEEecCCCch------------------------hHHHHHHHHHHHhhcc
Q 045682           59 NYDSEKVIMKRSFYTLYKGF-C--QERLISVMKFDASKPR------------------------MYDCCINNIVYASQMI  111 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~-~--~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~  111 (309)
                      .|...+.||+|+||.||+|. .  +|+.||+|.+......                        ....+..|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47778899999999999998 3  8899999998654210                        0123568999999997


Q ss_pred             CC--cceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEeCC
Q 045682          112 HR--CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP-VIFRD  188 (309)
Q Consensus       112 h~--niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-iiH~d  188 (309)
                      +.  .+++++++    ...++||||+++++|..++.       ............++.|++.++.+||   ..+ ++|+|
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~D  174 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL-------KDVEPEEEEEFELYDDILEEMRKLY---KEGELVHGD  174 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCccccccc-------ccCCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCC
Confidence            53  34455543    23589999999988877642       2334566667899999999999999   899 99999


Q ss_pred             CCCCCeeecCCCcEEEeeccccccc
Q 045682          189 FKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       189 lkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |||+||+++ ++.++|+|||.+...
T Consensus       175 ikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      175 LSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             CChhhEEEE-CCCEEEEEChhhhcc
Confidence            999999999 889999999988643

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.86  E-value=2.5e-21  Score=167.34  Aligned_cols=143  Identities=23%  Similarity=0.341  Sum_probs=126.3

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe-C----CeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCc
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC-Q----ERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQI  127 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~  127 (309)
                      ....+.|...++||+|.|++||++++ .    .+.||+|.+...+  ....+.+|+++|..+ .+.||+++.+++...+.
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            33456788899999999999999988 3    4789999987763  346789999999999 79999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-CCcEEEee
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLFD  206 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~~~~kl~D  206 (309)
                      ..+|+||++.....++..          .++...+..++..+..||.++|   .++||||||||+|+|.+. .+.-.|.|
T Consensus       110 v~ivlp~~~H~~f~~l~~----------~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvD  176 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYR----------SLSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVD  176 (418)
T ss_pred             eEEEecccCccCHHHHHh----------cCCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEe
Confidence            999999999988888864          5678889999999999999999   999999999999999974 46679999


Q ss_pred             ccccc
Q 045682          207 FSFSI  211 (309)
Q Consensus       207 fg~a~  211 (309)
                      ||+|.
T Consensus       177 FgLA~  181 (418)
T KOG1167|consen  177 FGLAQ  181 (418)
T ss_pred             chhHH
Confidence            99986

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.85  E-value=1e-20  Score=155.93  Aligned_cols=130  Identities=18%  Similarity=0.189  Sum_probs=108.4

Q ss_pred             ceeecCCeEEEEEEeCCeEEEEEEecCCCc--------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           65 VIMKRSFYTLYKGFCQERLISVMKFDASKP--------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      .||+|+||.||+|.+++..|++|.......        ....++.+|+.++..+.|+++.....++......++||||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            489999999999999999999998654321        112567789999999998877665556666677899999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |++|.+++.       ....       .++.+++.+|.+||   ..+++|+|++|.||+++ ++.++++|||++..
T Consensus        81 g~~l~~~~~-------~~~~-------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        81 GKPLKDVIE-------EGND-------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CccHHHHHh-------hcHH-------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            999999875       1111       78999999999999   99999999999999999 89999999998865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.85  E-value=1.1e-20  Score=156.28  Aligned_cols=139  Identities=17%  Similarity=0.116  Sum_probs=115.0

Q ss_pred             HhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHH---H------HHHHHHHHhhccCCcceeeeeeeeeC-
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYD---C------CINNIVYASQMIHRCFFKLIGCCLET-  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~---~------~~~e~~~l~~l~h~niv~l~g~~~~~-  125 (309)
                      ..++|...++||.|+||.||....++..+|+|.+.........   .      +.+|+..+.++.||+|..+.+++... 
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            4688999999999999999997667789999999765322222   2      57899999999999999998885532 


Q ss_pred             -------CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC
Q 045682          126 -------QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE  198 (309)
Q Consensus       126 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~  198 (309)
                             +..+|+|||++|.+|.++..           ++.    ....+++.++..+|   ..+++|+|++|+||+++.
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-----------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~  170 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPE-----------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSK  170 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhh-----------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeC
Confidence                   46899999999999988732           222    24669999999999   999999999999999999


Q ss_pred             CCcEEEeeccccccc
Q 045682          199 ENVAKLFDFSFSISI  213 (309)
Q Consensus       199 ~~~~kl~Dfg~a~~~  213 (309)
                      +| ++|+|||.....
T Consensus       171 ~g-i~liDfg~~~~~  184 (232)
T PRK10359        171 NG-LRIIDLSGKRCT  184 (232)
T ss_pred             CC-EEEEECCCcccc
Confidence            88 999999987655

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.84  E-value=7.4e-22  Score=161.98  Aligned_cols=233  Identities=16%  Similarity=0.165  Sum_probs=171.1

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ..+|.+.-.|..|+|+|.|..+++|++....  ....+.|.+|.-.|+-+.||||..++|.|.....+.++..|++.|||
T Consensus       195 ~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl  274 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL  274 (448)
T ss_pred             hhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence            3458888999999999999888888886653  33446799999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe--ecccccccCCCcc
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF--DFSFSISIPEGEL  218 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~--Dfg~a~~~~~~~~  218 (309)
                      ...|.     ....-.++..++.+++.++|+|++|||+. +.-|.-.-|....++||++.+++|+  |--+++...... 
T Consensus       275 ynvlh-----e~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~-  347 (448)
T KOG0195|consen  275 YNVLH-----EQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRA-  347 (448)
T ss_pred             HHHHh-----cCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeeccccc-
Confidence            99986     23456688889999999999999999963 2334444688999999999988775  433443322111 


Q ss_pred             cccccccccccc---------ccCCCcccHHHHHHHHhh------ccccccc-ccccccCCCCCCchHHHHHHHHHHHHH
Q 045682          219 LTGLRAFDLARL---------NEDDGYVALRDHVKKYFE------EDRLNEI-IDPLIMGDRSCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       219 ~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~g~~~~~~~~~~~~~l~~li~~  282 (309)
                        -.+++..++.         ....+.|++...+|++..      ..+..++ +.-.+.|-.. ..|+..+..+.+|+.-
T Consensus       348 --y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv-~ippgis~hm~klm~i  424 (448)
T KOG0195|consen  348 --YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRV-HIPPGISRHMNKLMNI  424 (448)
T ss_pred             --cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccc-cCCCCccHHHHHHHHH
Confidence              0111111211         112366778888887743      2333333 2233334333 3344778889999999


Q ss_pred             cccCCCCCCCCHHHHHHHHHHHH
Q 045682          283 CVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       283 Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      |++.||.+||.++.|+-.|+++.
T Consensus       425 cmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  425 CMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HhcCCCCcCCCcceehhhHHHhc
Confidence            99999999999999999999864

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.84  E-value=4.2e-20  Score=149.86  Aligned_cols=133  Identities=15%  Similarity=0.095  Sum_probs=108.4

Q ss_pred             CccCceeecCCeEEEEEEeCCeEEEEEEecCCCch----hHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEec
Q 045682           61 DSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPR----MYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .....|+.|+||+||.+...+.+++.+.+.....-    ....+.+|+++|+++ .|+++++++++    +..+++|||+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            34568999999999987778888988888766431    122578999999999 56889999886    3469999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCC-CCCCeeecCCCcEEEeecccccccC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF-KLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dl-kp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      .|.+|.+.+.        ..      ...++.|++.+|.++|   ..+|+|||| ||+|||++.++.++|+|||+|....
T Consensus        81 ~G~~L~~~~~--------~~------~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         81 AGAAMYQRPP--------RG------DLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             cCccHHhhhh--------hh------hHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            9989876531        11      1357889999999999   999999999 7999999999999999999997544

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.83  E-value=5.9e-20  Score=151.23  Aligned_cols=144  Identities=13%  Similarity=0.064  Sum_probs=111.4

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCch----------------------hHHHHHHHHHHH
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPR----------------------MYDCCINNIVYA  107 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l  107 (309)
                      +++......|...+.||+|+||.||++.. +++.||||++......                      ....+..|+.++
T Consensus         8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   87 (198)
T cd05144           8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL   87 (198)
T ss_pred             HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence            34444344477788999999999999998 8999999986543210                      112356789999


Q ss_pred             hhccCCc--ceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 045682          108 SQMIHRC--FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVI  185 (309)
Q Consensus       108 ~~l~h~n--iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ii  185 (309)
                      ..+.|++  ++..++    ....++||||+++++|.....       .      .....++.+++.++.++|   ..+++
T Consensus        88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-------~------~~~~~~~~~i~~~l~~lh---~~gi~  147 (198)
T cd05144          88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV-------L------EDPEEVLDEILEEIVKAY---KHGII  147 (198)
T ss_pred             HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhccc-------c------ccHHHHHHHHHHHHHHHH---HCCCC
Confidence            9998874  444443    245689999999999887632       0      234678999999999999   89999


Q ss_pred             eCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          186 FRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       186 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      |+||+|+||+++.++.++|+|||++....
T Consensus       148 H~Dl~p~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         148 HGDLSEFNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             cCCCCcccEEEcCCCcEEEEECCccccCC
Confidence            99999999999999999999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.83  E-value=3.4e-20  Score=174.55  Aligned_cols=137  Identities=15%  Similarity=0.150  Sum_probs=113.4

Q ss_pred             cCCCccCceeecCCeEEEEEEeCCeEEEEEEecCC--Cc------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDAS--KP------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ..|...+.||+|+||.||+|.+.+..+++|+....  ..      .....+.+|+.++..++|++++....++......+
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            44566789999999999999996656665543221  11      12356889999999999999998888887777889


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++++|.+++.               ....++.+++.+|.|||   +.+++||||||+|||+ .++.++|+|||+
T Consensus       413 lv~E~~~g~~L~~~l~---------------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGl  473 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE---------------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGL  473 (535)
T ss_pred             EEEEecCCCcHHHHHH---------------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcc
Confidence            9999999999999873               34679999999999999   9999999999999999 678999999999


Q ss_pred             cccc
Q 045682          210 SISI  213 (309)
Q Consensus       210 a~~~  213 (309)
                      ++..
T Consensus       474 a~~~  477 (535)
T PRK09605        474 GKYS  477 (535)
T ss_pred             cccC
Confidence            9753

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.83  E-value=2.1e-19  Score=151.32  Aligned_cols=147  Identities=20%  Similarity=0.232  Sum_probs=126.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .-+|.++++||+|+||.++.|..  +++.||||.-...  ....++..|...-+.| ..++|+.+|-+-..+..-.||+|
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            45699999999999999999998  9999999974433  2345678888888888 78999999988888888889999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-----CcEEEeecc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-----NVAKLFDFS  208 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-----~~~kl~Dfg  208 (309)
                      ++ |.||+|+...      .+..++..++..+|.|+..-++|+|   ++.+|+|||||+|+||...     ..+.|+|||
T Consensus       105 LL-GPSLEDLFD~------CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG  174 (449)
T KOG1165|consen  105 LL-GPSLEDLFDL------CGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG  174 (449)
T ss_pred             hh-CcCHHHHHHH------hcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEecc
Confidence            88 4599998763      4678999999999999999999999   9999999999999999644     458999999


Q ss_pred             cccccCC
Q 045682          209 FSISIPE  215 (309)
Q Consensus       209 ~a~~~~~  215 (309)
                      +|+...+
T Consensus       175 mAK~YrD  181 (449)
T KOG1165|consen  175 MAKEYRD  181 (449)
T ss_pred             chhhhcC
Confidence            9987744

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.82  E-value=5.6e-19  Score=142.73  Aligned_cols=235  Identities=17%  Similarity=0.193  Sum_probs=163.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ..+.|...+.||.|+||.+|.|..  +|..||+|.-...  ..-.++.-|.++-..++ -..|+.+..+..+...-.+||
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            446799999999999999999998  8999999985443  22245778888888884 567888888888888889999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEEeeccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKLFDFSF  209 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~  209 (309)
                      +.+ |.||+++...+      ...++..+++-++-|++.-++|+|   .+++|||||||+|.|..-   -..+.++|||+
T Consensus        91 dLL-GPsLEdLfnfC------~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL  160 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFC------SRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL  160 (341)
T ss_pred             ecc-CccHHHHHHHH------hhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccc
Confidence            988 45999987643      456888899999999999999999   999999999999999964   35689999999


Q ss_pred             ccccCCCc-----------cccccccccccccccCCCcccHHHHHHHHhhcccccccccccccCCCCCCc----------
Q 045682          210 SISIPEGE-----------LLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSG----------  268 (309)
Q Consensus       210 a~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------  268 (309)
                      |+...+..           -++|...+..-..-.+ -..+-.+++      .+++-++-....|..||+.          
T Consensus       161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDm------eSvgYvLmYfnrG~LPWQglka~tk~QKy  233 (341)
T KOG1163|consen  161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDM------ESVGYVLMYFNRGSLPWQGLKAATKKQKY  233 (341)
T ss_pred             hhhhccccccccCccccCCccceeeeehhhhhhhh-hhhhhhhhh------hhhcceeeeeecCCCcccccchhhHHHHH
Confidence            98774422           2333322211000000 000000111      0111122222233333332          


Q ss_pred             ---------------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 045682          269 ---------------KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSCA  309 (309)
Q Consensus       269 ---------------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~~  309 (309)
                                     +...+.++...+.-|-..-=++-|...-+.+...-|...++
T Consensus       234 EkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln  289 (341)
T KOG1163|consen  234 EKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN  289 (341)
T ss_pred             HHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence                           12335778888888888888888888888777777766553

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.82  E-value=1.7e-20  Score=184.56  Aligned_cols=180  Identities=12%  Similarity=0.102  Sum_probs=117.7

Q ss_pred             hccC-Ccceeeeeee-------eeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 045682          109 QMIH-RCFFKLIGCC-------LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF  180 (309)
Q Consensus       109 ~l~h-~niv~l~g~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~  180 (309)
                      .++| +||+++++++       .....+++++||+. ++|.++|.      .....+++..++.++.||+.||+|||   
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~------~~~~~~~~~~~~~i~~qi~~al~~lH---   97 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLD------NPDRSVDAFECFHVFRQIVEIVNAAH---   97 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHh------cccccccHHHHHHHHHHHHHHHHHHH---
Confidence            3455 6888888887       22345677888874 59999985      13456999999999999999999999   


Q ss_pred             CCCeEeCCCCCCCeeecC-------------------CCcEEEeecccccccCCC--------------------ccccc
Q 045682          181 PRPVIFRDFKLSNILFNE-------------------ENVAKLFDFSFSISIPEG--------------------ELLTG  221 (309)
Q Consensus       181 ~~~iiH~dlkp~Nill~~-------------------~~~~kl~Dfg~a~~~~~~--------------------~~~~g  221 (309)
                      +++|+||||||+||||+.                   ++.+|++|||+++.....                    ....|
T Consensus        98 ~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  177 (793)
T PLN00181         98 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAME  177 (793)
T ss_pred             hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCC
Confidence            999999999999999954                   445667777776542110                    01123


Q ss_pred             ccccccccccc------CCCcccHHHHHHHHhhcccccc----cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCC
Q 045682          222 LRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE----IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDR  291 (309)
Q Consensus       222 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~R  291 (309)
                      ...|.+|+...      ..+.|+++..+++++.+.....    .+........+... .........++..||+++|.+|
T Consensus       178 t~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~P~~R  256 (793)
T PLN00181        178 MSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQI-LLNWPKEASFCLWLLHPEPSCR  256 (793)
T ss_pred             CcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhh-hhcCHHHHHHHHHhCCCChhhC
Confidence            33455555432      2355666666666654322111    11111111111111 1223456788999999999999


Q ss_pred             CCHHHHHH
Q 045682          292 PTMVDVAK  299 (309)
Q Consensus       292 Pt~~~l~~  299 (309)
                      ||+.+|++
T Consensus       257 ps~~eil~  264 (793)
T PLN00181        257 PSMSELLQ  264 (793)
T ss_pred             cChHHHhh
Confidence            99999974

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.79  E-value=3.3e-18  Score=151.29  Aligned_cols=144  Identities=19%  Similarity=0.176  Sum_probs=119.7

Q ss_pred             CCCccCceeecCCeEEEEEEe-C--CeEEEEEEecCCCchhHHHHHHHHHHHhhccC----Ccceeeeeee-eeCCceEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-Q--ERLISVMKFDASKPRMYDCCINNIVYASQMIH----RCFFKLIGCC-LETQIPIL  130 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~g~~-~~~~~~~l  130 (309)
                      .|.....||+|+||.||.+.. .  ...+|+|.-..........+..|..++..+..    +++..+++.. ..+...++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            789999999999999999998 3  24688888766533322367788999988863    6888999888 47778899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-----CcEEEe
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-----NVAKLF  205 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-----~~~kl~  205 (309)
                      ||+.+. .||.++....     ....++..+++.++.|++.+|.++|   +.+++||||||+|+++...     ..+.|.
T Consensus        99 VM~l~G-~sL~dl~~~~-----~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~ll  169 (322)
T KOG1164|consen   99 VMSLLG-PSLEDLRKRN-----PPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLL  169 (322)
T ss_pred             EEeccC-ccHHHHHHhC-----CCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEE
Confidence            999884 5999986422     2578999999999999999999999   9999999999999999754     469999


Q ss_pred             eccccc
Q 045682          206 DFSFSI  211 (309)
Q Consensus       206 Dfg~a~  211 (309)
                      |||+++
T Consensus       170 DfGlar  175 (322)
T KOG1164|consen  170 DFGLAR  175 (322)
T ss_pred             ecCCCc
Confidence            999998

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.78  E-value=4.4e-19  Score=167.11  Aligned_cols=228  Identities=15%  Similarity=0.151  Sum_probs=165.2

Q ss_pred             CccCceeecCCeEEEEEEe--CCeEEEEEEec----C-CCchhH-HHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           61 DSEKVIMKRSFYTLYKGFC--QERLISVMKFD----A-SKPRMY-DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~----~-~~~~~~-~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ....++|.|++|.|+....  .....+.|...    . ...... ..+..|+.+-..+.|||++..+..+.+.....-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            3567899999997777765  33333444322    1 111111 22677888888899999998888887766555569


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |||++ +|..++.       ....+....+..++.|+..|+.|+|   +.++.|||+||+|++++.+|.+||+|||.+..
T Consensus       401 E~~~~-Dlf~~~~-------~~~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~v  469 (601)
T KOG0590|consen  401 EYCPY-DLFSLVM-------SNGKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASV  469 (601)
T ss_pred             hcccH-HHHHHHh-------cccccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCccee
Confidence            99999 9999986       4457888899999999999999999   99999999999999999999999999998765


Q ss_pred             cCCC--------ccccccccccccccccCCCcccHHHHHHHH---hhcccccc-------cccc-----cccCC-----C
Q 045682          213 IPEG--------ELLTGLRAFDLARLNEDDGYVALRDHVKKY---FEEDRLNE-------IIDP-----LIMGD-----R  264 (309)
Q Consensus       213 ~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~~-----~~~g~-----~  264 (309)
                      ....        .-..|..||.+++......+.....++|..   +-......       .-+.     .-.+.     .
T Consensus       470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~  549 (601)
T KOG0590|consen  470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG  549 (601)
T ss_pred             eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence            5221        246788999998888888888888888876   11111000       0000     00000     0


Q ss_pred             CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 ~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +...-...+.+...++.++|+.+|.+|.|+.+|++
T Consensus       550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            11111244677889999999999999999999984

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.77  E-value=7.7e-18  Score=142.19  Aligned_cols=135  Identities=16%  Similarity=0.104  Sum_probs=107.0

Q ss_pred             cCcee-ecCCeEEEEEEeCCeEEEEEEecCCC-------------chhHHHHHHHHHHHhhccCCcc--eeeeeeeeeC-
Q 045682           63 EKVIM-KRSFYTLYKGFCQERLISVMKFDASK-------------PRMYDCCINNIVYASQMIHRCF--FKLIGCCLET-  125 (309)
Q Consensus        63 ~~~lg-~G~~g~V~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~l~g~~~~~-  125 (309)
                      ...|| .||.|+||.+...+..+++|++....             ......+.+|+.++..+.|++|  +..+++...+ 
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            45688 89999999998888899999875421             1223467889999999998875  6777765432 


Q ss_pred             C---ceEEEEEeccC-CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc
Q 045682          126 Q---IPILVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV  201 (309)
Q Consensus       126 ~---~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~  201 (309)
                      .   ..++|||++++ .+|.+++.        ...++..    .+.+++.+|.+||   ..+|+|+||||.|||++.++.
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~--------~~~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~  180 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQ--------EAPLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGK  180 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHh--------cCCCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCC
Confidence            2   23599999997 69999875        2345543    3678999999999   999999999999999999999


Q ss_pred             EEEeecccccc
Q 045682          202 AKLFDFSFSIS  212 (309)
Q Consensus       202 ~kl~Dfg~a~~  212 (309)
                      ++|+|||.+..
T Consensus       181 v~LIDfg~~~~  191 (239)
T PRK01723        181 FWLIDFDRGEL  191 (239)
T ss_pred             EEEEECCCccc
Confidence            99999998865

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.77  E-value=1.1e-17  Score=130.91  Aligned_cols=134  Identities=13%  Similarity=0.090  Sum_probs=113.2

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccC--CcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIH--RCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      .+.||.|.++.||++..++..+++|.......  ...+..|+.++..++|  .++++++++....+..++++||++++++
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~   80 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL   80 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence            45799999999999999778999999866533  4678899999999976  5899999988888889999999998766


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ..+              +......++.+++.+++++|.....+++|+|++|.||+++.++.++++|||.+..
T Consensus        81 ~~~--------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          81 DEV--------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             ccC--------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            542              4456678899999999999943235799999999999999989999999998864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.77  E-value=5.5e-18  Score=138.16  Aligned_cols=134  Identities=14%  Similarity=0.170  Sum_probs=97.3

Q ss_pred             cCceeecCCeEEEEEEe-CCeEEEEEEecCCCch--hHHHH----------------------HHHHHHHhhccCCc--c
Q 045682           63 EKVIMKRSFYTLYKGFC-QERLISVMKFDASKPR--MYDCC----------------------INNIVYASQMIHRC--F  115 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~--~~~~~----------------------~~e~~~l~~l~h~n--i  115 (309)
                      .+.||+|+||+||+|.. +++.||||.+......  ....+                      ..|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            45799999999999999 6999999988654211  11111                      35566666664432  4


Q ss_pred             eeeeeeeeeCCceEEEEEeccCCChhhh-hhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCC
Q 045682          116 FKLIGCCLETQIPILVFEYINCGSLADR-IRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSN  193 (309)
Q Consensus       116 v~l~g~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~N  193 (309)
                      ++.+++    ...++||||++++++... +.        ..... .....++.+++.++.++|   . .+++|+||+|+|
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~--------~~~~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~N  145 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLK--------DVRLL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYN  145 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhh--------hhhhc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhh
Confidence            444443    246899999999654322 11        00011 567889999999999999   7 999999999999


Q ss_pred             eeecCCCcEEEeeccccccc
Q 045682          194 ILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       194 ill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++ ++.++|+|||.+...
T Consensus       146 ili~-~~~~~liDfg~a~~~  164 (187)
T cd05119         146 ILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             EEEE-CCcEEEEECcccccc
Confidence            9999 999999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=2.8e-18  Score=150.99  Aligned_cols=133  Identities=19%  Similarity=0.336  Sum_probs=113.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-----C---Ccceeeeeeeee---
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-----H---RCFFKLIGCCLE---  124 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~g~~~~---  124 (309)
                      +.|....+||.|-|++||.+.+  ..+-||+|+.+... ...+..+.||++|++++     |   ..||+|++.|..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            6688889999999999999998  67889999986653 44466789999999983     2   368999999964   


Q ss_pred             -CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          125 -TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       125 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                       +..++||+|++.. +|..++...     ..+.++...+..|+.||+.||.|||.  ..+|||-||||+|||+..+
T Consensus       157 NG~HVCMVfEvLGd-nLLklI~~s-----~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  157 NGQHVCMVFEVLGD-NLLKLIKYS-----NYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCcEEEEEehhhhh-HHHHHHHHh-----CCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeecc
Confidence             4579999999965 999998733     67889999999999999999999997  6799999999999999543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.76  E-value=3.4e-17  Score=143.62  Aligned_cols=232  Identities=19%  Similarity=0.265  Sum_probs=164.9

Q ss_pred             CCccCceeecCCeEEEEEEeCCeEEEEEEecCCCch---hHHHHHHHHHHHhhccCC-cceeeeeeeeeCCceEEEEEec
Q 045682           60 YDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPR---MYDCCINNIVYASQMIHR-CFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      |.....||.|+||.||.+.+. ..+++|.+......   ....+.+|+.++..+.|+ +++++.+++......+++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            556678999999999999988 77899988775422   467799999999999888 7999999997777789999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeecccccccC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSISIP  214 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~  214 (309)
                      .++++.+++.....    ...+.......++.|++.++.|+|   ..+++|||+||+||+++..+ .++++|||++....
T Consensus        81 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~  153 (384)
T COG0515          81 DGGSLEDLLKKIGR----KGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP  153 (384)
T ss_pred             CCCcHHHHHHhccc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence            99999977651100    037899999999999999999999   89999999999999999988 79999999987554


Q ss_pred             CC----------ccccccccccccccccCC--CcccHHHHHH-------HHhhcccc----------cccccccccCCCC
Q 045682          215 EG----------ELLTGLRAFDLARLNEDD--GYVALRDHVK-------KYFEEDRL----------NEIIDPLIMGDRS  265 (309)
Q Consensus       215 ~~----------~~~~g~~~~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~----------~~~~~~~~~g~~~  265 (309)
                      ..          ....|...+..++.....  .......++|       ....+...          ....+.......+
T Consensus       154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  233 (384)
T COG0515         154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP  233 (384)
T ss_pred             CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc
Confidence            32          334455556655544331  2233333333       22222111          0111111111111


Q ss_pred             -CC--chH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          266 -CS--GKE----QQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       266 -~~--~~~----~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       ..  ...    .....+.+++..|+..+|..|.+..+...
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         234 SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence             00  110    11256889999999999999999887764

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.74  E-value=1.5e-17  Score=150.49  Aligned_cols=192  Identities=25%  Similarity=0.325  Sum_probs=141.3

Q ss_pred             HhhccCCcceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 045682          107 ASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF  186 (309)
Q Consensus       107 l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH  186 (309)
                      |+.+.|.|+.+++|.+.+++..++|++||..|+|.+.+.      .....++|.....++.+|+.||+|||+  +.-..|
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~------~~~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~h   72 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILS------NEDIKLDYFFILSFIRDISKGLAYLHN--SPIGYH   72 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHh------ccccCccHHHHHHHHHHHHHHHHHHhc--Ccceee
Confidence            356899999999999999999999999999999999986      246789999999999999999999995  333399


Q ss_pred             CCCCCCCeeecCCCcEEEeecccccccCCC------------------ccccccccccc-cccccCCCcccHHHHHHHHh
Q 045682          187 RDFKLSNILFNEENVAKLFDFSFSISIPEG------------------ELLTGLRAFDL-ARLNEDDGYVALRDHVKKYF  247 (309)
Q Consensus       187 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~------------------~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  247 (309)
                      +.+++.|+++|....+||+|||+.......                  ++..+...... +......+.+++.....+.+
T Consensus        73 g~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~  152 (484)
T KOG1023|consen   73 GALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL  152 (484)
T ss_pred             eeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence            999999999999999999999998776421                  12222111110 11222346677777766663


Q ss_pred             hccc----------cccccccccc-CCCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          248 EEDR----------LNEIIDPLIM-GDRSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       248 ~~~~----------~~~~~~~~~~-g~~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ....          ..+++..+.. +..++.+.    ....+++..++.+||..+|..||++.+|...++.+.+
T Consensus       153 ~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  153 FRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             hccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence            3211          1245555444 33222221    1334579999999999999999999999998887765

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.72  E-value=7e-17  Score=155.93  Aligned_cols=236  Identities=17%  Similarity=0.233  Sum_probs=150.7

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCc-h--hHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKP-R--MYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~-~--~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      ++.....|...+.||+|+||+||.|.. +++.||+|.=+.... .  -..+.+..++ + + --+-|..+..++.-.+..
T Consensus       693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-~-~-~~~~~~~~~~a~~~~~~S  769 (974)
T KOG1166|consen  693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-P-Q-MLPSIMHISSAHVFQNAS  769 (974)
T ss_pred             eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-h-h-hhcchHHHHHHHccCCcc
Confidence            344556688888999999999999999 899999998665431 1  1133333333 1 1 123344555555556677


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec-------CCCc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN-------EENV  201 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~-------~~~~  201 (309)
                      +||+||.+.|+|.+++.       ....++|..++.++.|+++.+..||   ..+|||+||||+|.||.       ....
T Consensus       770 ~lv~ey~~~Gtlld~~N-------~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~  839 (974)
T KOG1166|consen  770 VLVSEYSPYGTLLDLIN-------TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKG  839 (974)
T ss_pred             eeeeeccccccHHHhhc-------cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccc
Confidence            89999999999999985       6788999999999999999999999   99999999999999993       2345


Q ss_pred             EEEeeccccccc---CCCcccccccc---ccccc------cccCCCcccHHHHHHHHhhcccccccccccccCCCCCCc-
Q 045682          202 AKLFDFSFSISI---PEGELLTGLRA---FDLAR------LNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSG-  268 (309)
Q Consensus       202 ~kl~Dfg~a~~~---~~~~~~~g~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-  268 (309)
                      ++|+|||.|.-.   +++..+.+..-   +...+      +....+++.++..+..++-+.-+.     ...|..-... 
T Consensus       840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-----~~~g~~~~~~~  914 (974)
T KOG1166|consen  840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-----VKNGSSWMVKT  914 (974)
T ss_pred             eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-----hcCCcceeccc
Confidence            899999987533   33322221111   11111      111125666777766655443222     2222221111 


Q ss_pred             --hHHHH-HHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          269 --KEQQL-QAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       269 --~~~~~-~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                        +...- +-+.++..+.|++|-..=|...+|...|++.+.
T Consensus       915 ~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~  955 (974)
T KOG1166|consen  915 NFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA  955 (974)
T ss_pred             cchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence              11111 224456666666333333777888777777654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.70  E-value=9.7e-17  Score=136.81  Aligned_cols=228  Identities=17%  Similarity=0.140  Sum_probs=132.8

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhcc----------CCcceeeeeeee-
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMI----------HRCFFKLIGCCL-  123 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~----------h~niv~l~g~~~-  123 (309)
                      +..+..||.|+++.||.+++  +++.+|+|.+....   ....+++.+|.-....+.          |-.++-.++... 
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            44567899999999999999  78999999875432   234566777765544432          222222222221 


Q ss_pred             --------eC---C-----ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeC
Q 045682          124 --------ET---Q-----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR  187 (309)
Q Consensus       124 --------~~---~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~  187 (309)
                              ..   +     ..+++|+-+. ++|.+++............+....++.+..|+++.+++||   ..+++|+
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHg  169 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHG  169 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred             cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEec
Confidence                    11   1     2356777664 5898887532211112334556677888899999999999   9999999


Q ss_pred             CCCCCCeeecCCCcEEEeecccccccCCCccc-cccccccccc--------------cccCCCcccHHHHHHHHhhcccc
Q 045682          188 DFKLSNILFNEENVAKLFDFSFSISIPEGELL-TGLRAFDLAR--------------LNEDDGYVALRDHVKKYFEEDRL  252 (309)
Q Consensus       188 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~g~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~  252 (309)
                      ||+|+|++++.+|.++|+||+........... .....+..++              .....+.|.++..++.++.....
T Consensus       170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP  249 (288)
T PF14531_consen  170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP  249 (288)
T ss_dssp             T-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred             ccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence            99999999999999999999876654432221 1111111111              11222456666666666665543


Q ss_pred             cccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCC
Q 045682          253 NEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDR  291 (309)
Q Consensus       253 ~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~R  291 (309)
                      .............+..+.+.++.+..||...|+.||.+|
T Consensus       250 f~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  250 FGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             TCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence            333332222221222233777899999999999999988

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.70  E-value=1.7e-16  Score=127.97  Aligned_cols=151  Identities=17%  Similarity=0.163  Sum_probs=104.8

Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      |||.+++..      ....+++.+++.++.|++.||.|||   +.+      ||+|||++.++.+|+  ||++.......
T Consensus         1 GsL~~~l~~------~~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~   63 (176)
T smart00750        1 VSLADILEV------RGRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ   63 (176)
T ss_pred             CcHHHHHHH------hCCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc
Confidence            689999861      2456999999999999999999999   555      999999999999999  99987664433


Q ss_pred             ccccccccccccccc------CCCcccHHHHHHHHhhccccc-------ccccccccCCCCC-----CchHHHHH--HHH
Q 045682          218 LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSC-----SGKEQQLQ--AYA  277 (309)
Q Consensus       218 ~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~-----~~~~~~~~--~l~  277 (309)
                       ..|...|.+|+...      ..+.|+++..+++++.+....       ..+.....+..+.     ..+.....  ++.
T Consensus        64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (176)
T smart00750       64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFA  142 (176)
T ss_pred             -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHH
Confidence             24556666666433      235566666666665443211       1111111111111     11223333  699


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      +++.+||+.+|.+|||+.++++.+..+..
T Consensus       143 ~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750      143 DFMRVCASRLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             HHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence            99999999999999999999998876654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.66  E-value=1.1e-15  Score=139.81  Aligned_cols=139  Identities=15%  Similarity=0.148  Sum_probs=99.1

Q ss_pred             CceeecCCeEEEEEEe-CCeEEEEEEecCCCchhH----------------------------------------HHHHH
Q 045682           64 KVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMY----------------------------------------DCCIN  102 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~----------------------------------------~~~~~  102 (309)
                      +.||.|++|+||+|++ +|+.||||..+.......                                        -.|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            5799999999999999 899999999865421110                                        01344


Q ss_pred             HHHHHhhcc-----CCcceeeeeeee-eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHH-HHHH
Q 045682          103 NIVYASQMI-----HRCFFKLIGCCL-ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN-AIAY  175 (309)
Q Consensus       103 e~~~l~~l~-----h~niv~l~g~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~-~l~y  175 (309)
                      |+..+.++.     +++| .+-.++. ..+..+|||||++|++|.++....      ....   ....++..++. .+..
T Consensus       203 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~------~~~~---~~~~ia~~~~~~~l~q  272 (437)
T TIGR01982       203 EAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALD------EAGL---DRKALAENLARSFLNQ  272 (437)
T ss_pred             HHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHH------hcCC---CHHHHHHHHHHHHHHH
Confidence            555555542     3333 2222222 244579999999999999986421      1112   23456666666 4788


Q ss_pred             hhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       176 LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      +|   ..+++|+|++|.||+++.++.++++|||++...+.
T Consensus       273 l~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       273 VL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            89   89999999999999999999999999999977654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=2.2e-14  Score=124.01  Aligned_cols=179  Identities=16%  Similarity=0.181  Sum_probs=115.4

Q ss_pred             cCCcceeeeeeeeeC---------------------------CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHH
Q 045682          111 IHRCFFKLIGCCLET---------------------------QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL  163 (309)
Q Consensus       111 ~h~niv~l~g~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~  163 (309)
                      .|||||++.++|.+.                           ...|+||...+. +|.+||.        ....+.....
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~--------~~~~s~r~~~  344 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW--------TRHRSYRTGR  344 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh--------cCCCchHHHH
Confidence            699999999887532                           256899998876 9999985        3345555666


Q ss_pred             HHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee--cCCC--cEEEeecccccccCCC---------c-------------
Q 045682          164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF--NEEN--VAKLFDFSFSISIPEG---------E-------------  217 (309)
Q Consensus       164 ~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill--~~~~--~~kl~Dfg~a~~~~~~---------~-------------  217 (309)
                      -++.|+++|+.|||   ..+|.|||+|.+|||+  |+|+  .+.|+|||.+-.-...         +             
T Consensus       345 ~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPE  421 (598)
T KOG4158|consen  345 VILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPE  421 (598)
T ss_pred             HHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchh
Confidence            79999999999999   9999999999999999  5555  4688999976432211         1             


Q ss_pred             cccccccccccccccCCCcccHHHHHHHHhhcccc-cc----cccccc-cCCCCCCchHHHHHHHHHHHHHcccCCCCCC
Q 045682          218 LLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRL-NE----IIDPLI-MGDRSCSGKEQQLQAYAHLIFECVNESPVDR  291 (309)
Q Consensus       218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~-~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~R  291 (309)
                      +.+..+...+-......+.|......++.|...+. ..    .++... ...-.+..+..++..+.+|+...++.||++|
T Consensus       422 i~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskR  501 (598)
T KOG4158|consen  422 IATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKR  501 (598)
T ss_pred             hhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCcccc
Confidence            11111111111111223455555566666543321 11    111111 1111122345777889999999999999999


Q ss_pred             CCHHHHHHHH
Q 045682          292 PTMVDVAKKL  301 (309)
Q Consensus       292 Pt~~~l~~~L  301 (309)
                      |+..-....|
T Consensus       502 vsp~iAANvl  511 (598)
T KOG4158|consen  502 VSPNIAANVL  511 (598)
T ss_pred             CCccHHHhHH
Confidence            9876554443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.55  E-value=6.8e-16  Score=140.32  Aligned_cols=218  Identities=14%  Similarity=0.149  Sum_probs=163.7

Q ss_pred             ceeecCCeEEEEEEe-----CCeEEEEEEecCCC--chhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEEEecc
Q 045682           65 VIMKRSFYTLYKGFC-----QERLISVMKFDASK--PRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      .+|+|.||.|+.+.-     .+..+|+|.+....  .........|-.++..++ ||.+|++...+..++..+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            379999999986643     55778888775532  111124456777788885 9999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|.|...+.       .....++.....+...+|-|++++|   +.+++|||+|++||+++.+|.+++.|||+++.....
T Consensus        81 gg~lft~l~-------~~~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~  150 (612)
T KOG0603|consen   81 GGDLFTRLS-------KEVMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE  150 (612)
T ss_pred             cchhhhccc-------cCCchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhh
Confidence            999999875       5666778888889999999999999   999999999999999999999999999999988877


Q ss_pred             cccccccccccccccc----CCCcccHHHHHHHHhhcccc-c-ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCC
Q 045682          217 ELLTGLRAFDLARLNE----DDGYVALRDHVKKYFEEDRL-N-EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVD  290 (309)
Q Consensus       217 ~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~  290 (309)
                      +..+|..-+.+++...    ..+.|++.....++..+... . +++..++....  ..|...+....+++......+|..
T Consensus       151 ~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~--~~p~~l~~~a~~~~~~l~~r~p~n  228 (612)
T KOG0603|consen  151 KIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAEL--EMPRELSAEARSLFRQLFKRNPEN  228 (612)
T ss_pred             hhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhcc--CCchhhhHHHHHHHHHHHhhCHHH
Confidence            7778888887776643    22344444434444333221 1 23344433332  234577777888888888888888


Q ss_pred             CCCH
Q 045682          291 RPTM  294 (309)
Q Consensus       291 RPt~  294 (309)
                      |.-.
T Consensus       229 rLg~  232 (612)
T KOG0603|consen  229 RLGA  232 (612)
T ss_pred             Hhcc
Confidence            8544

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.55  E-value=7.1e-14  Score=129.67  Aligned_cols=146  Identities=12%  Similarity=0.092  Sum_probs=93.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe-C-CeEEEEEEecCCCch----------------------------------hHHH--
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-Q-ERLISVMKFDASKPR----------------------------------MYDC--   99 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~-~~~vavK~~~~~~~~----------------------------------~~~~--   99 (309)
                      ..|+. +.||.|++|+||+|++ + |+.||||...+.-..                                  ..+.  
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            45766 6899999999999999 5 999999998754210                                  0111  


Q ss_pred             ----HHHHHHHHhhcc----CCcceeeeeeeee-CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHH
Q 045682          100 ----CINNIVYASQMI----HRCFFKLIGCCLE-TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA  170 (309)
Q Consensus       100 ----~~~e~~~l~~l~----h~niv~l~g~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia  170 (309)
                          |.+|+..+.++.    +.+.+.+-.++.+ .+..+|||||++|+++.++-..... ......+....+..++.|+ 
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~-g~d~~~la~~~v~~~~~Qi-  276 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA-GTDMKLLAERGVEVFFTQV-  276 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc-CCCHHHHHHHHHHHHHHHH-
Confidence                334444444442    3333333333332 4557899999999999875321100 0001123333333334443 


Q ss_pred             HHHHHhhcCCCCCeEeCCCCCCCeeecCCC----cEEEeecccccccCC
Q 045682          171 NAIAYLHVGFPRPVIFRDFKLSNILFNEEN----VAKLFDFSFSISIPE  215 (309)
Q Consensus       171 ~~l~yLH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~a~~~~~  215 (309)
                            .   ..+++|+|++|.||+++.++    .+++.|||++...+.
T Consensus       277 ------f---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 ------F---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             ------H---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                  3   57999999999999999888    999999999876644

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.54  E-value=9.1e-14  Score=111.29  Aligned_cols=127  Identities=15%  Similarity=0.100  Sum_probs=96.6

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcc-eeeeeeeeeCCceEEEEEeccCCChhh
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCF-FKLIGCCLETQIPILVFEYINCGSLAD  142 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e~~~~gsL~~  142 (309)
                      +.|+.|.++.||++...+..+++|....... ....+..|+.++..+.+.++ ++++++.  ....++||||+++.++.+
T Consensus         4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT   80 (170)
T ss_pred             eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence            4578899999999999889999998755432 12346789999999865554 4555543  334589999999987764


Q ss_pred             hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-----eEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          143 RIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP-----VIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       143 ~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-----iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      .-            .   ....++.+++++|+.||   ..+     ++|+|++|.||+++ ++.++++|||.+..
T Consensus        81 ~~------------~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          81 ED------------F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             cc------------c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            30            0   01346789999999999   665     59999999999999 67899999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.53  E-value=7.9e-15  Score=140.46  Aligned_cols=230  Identities=18%  Similarity=0.149  Sum_probs=157.7

Q ss_pred             CCCccCceeecCCeEEEEEEeCCeEEEEEEecCCC-chhHH---HHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK-PRMYD---CCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~---~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++...+.||.+.|=.|.+|.+++..|+||.+-+.. ....+   +-+.|++ ...++|||.+.+.-+...+...|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            46667889999999999999955559999986654 23333   3445555 4455999999998888888888999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc-
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI-  213 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~-  213 (309)
                      ... +|.|.|.       .+.-+...+..=|+.|++.||.-+|   ..+|+|+|||.+||||++-+=+.|+||..-+.. 
T Consensus       103 vkh-nLyDRlS-------TRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY  171 (1431)
T KOG1240|consen  103 VKH-NLYDRLS-------TRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTY  171 (1431)
T ss_pred             Hhh-hhhhhhc-------cchHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCcc
Confidence            987 9999986       5566777777889999999999999   999999999999999999989999999643211 


Q ss_pred             -CCCc---------ccccccccccc-----------------ccccCCCcccHHHHHHHHhhc-cccc---ccccccccC
Q 045682          214 -PEGE---------LLTGLRAFDLA-----------------RLNEDDGYVALRDHVKKYFEE-DRLN---EIIDPLIMG  262 (309)
Q Consensus       214 -~~~~---------~~~g~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~g  262 (309)
                       +.+.         ....+..+-+|                 ......+.++.+..+.++|.. ..+.   +++.....+
T Consensus       172 LPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~  251 (1431)
T KOG1240|consen  172 LPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN  251 (1431)
T ss_pred             CCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC
Confidence             1111         00001111111                 122233455666666666644 3322   222222221


Q ss_pred             CCCCC--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          263 DRSCS--GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       263 ~~~~~--~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      .....  ...-....++.++..|++.||+.|.++++.++.
T Consensus       252 ~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  252 ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            11100  000112458899999999999999999999876

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.47  E-value=1.6e-12  Score=105.39  Aligned_cols=134  Identities=10%  Similarity=0.083  Sum_probs=98.4

Q ss_pred             CceeecCCeEEEEEEe-C-------CeEEEEEEecCCC----------------------chhHHHHH----HHHHHHhh
Q 045682           64 KVIMKRSFYTLYKGFC-Q-------ERLISVMKFDASK----------------------PRMYDCCI----NNIVYASQ  109 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~-------~~~vavK~~~~~~----------------------~~~~~~~~----~e~~~l~~  109 (309)
                      ..||.|.=+.||.|.. +       +..+|||..+...                      ....+.+.    +|+..|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            4689999999999986 3       3789999763311                      01112233    89999999


Q ss_pred             ccC--CcceeeeeeeeeCCceEEEEEeccCCChhh-hhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeE
Q 045682          110 MIH--RCFFKLIGCCLETQIPILVFEYINCGSLAD-RIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL-HVGFPRPVI  185 (309)
Q Consensus       110 l~h--~niv~l~g~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yL-H~~~~~~ii  185 (309)
                      +..  -+++.++++    ..-+|||||+.+..+.. .|+        ...++..+...+..+++.+|..+ |   ..++|
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk--------d~~~~~~~~~~i~~~i~~~l~~l~H---~~glV  147 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK--------DAKLNDEEMKNAYYQVLSMMKQLYK---ECNLV  147 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh--------ccccCHHHHHHHHHHHHHHHHHHHH---hCCee
Confidence            943  567777764    45689999998754432 221        22345556678889999999999 7   89999


Q ss_pred             eCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          186 FRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       186 H~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+||++.||+++ ++.+.|+|||.+...
T Consensus       148 HGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         148 HADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             cCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            999999999997 578999999977543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.45  E-value=2.7e-12  Score=100.59  Aligned_cols=144  Identities=17%  Similarity=0.125  Sum_probs=109.4

Q ss_pred             ccCceeecCCeEEEEEEeCCeEEEEEEecCCC---c-----hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           62 SEKVIMKRSFYTLYKGFCQERLISVMKFDASK---P-----RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~-----~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ...+|-+|+-+.|+++.+.|+...||.--...   +     -...+..+|+++|.++.--.|.-..-++.+...-.|+||
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            56789999999999999999999998643221   1     123456789999999976666555555666666789999


Q ss_pred             eccC-CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC---cEEEeeccc
Q 045682          134 YINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN---VAKLFDFSF  209 (309)
Q Consensus       134 ~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~  209 (309)
                      |+++ -++.+|+...-     ...........++..|-+.+.-||   ...+||+||..+||++..++   .+.++|||+
T Consensus        91 ~~~g~~~vk~~i~~~~-----~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgl  162 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTM-----EDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGL  162 (229)
T ss_pred             eccchhHHHHHHHHHc-----cCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecc
Confidence            9987 48899986432     222233333678999999999999   99999999999999996554   468999999


Q ss_pred             cccc
Q 045682          210 SISI  213 (309)
Q Consensus       210 a~~~  213 (309)
                      +...
T Consensus       163 s~~s  166 (229)
T KOG3087|consen  163 SSVS  166 (229)
T ss_pred             hhcc
Confidence            8754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.44  E-value=2.3e-12  Score=101.35  Aligned_cols=132  Identities=15%  Similarity=0.169  Sum_probs=103.3

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCC---ch-----hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASK---PR-----MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~-----~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ..+++|+-+.+|.+.+-|.++++|.-.+..   +.     ...+-.+|+.++.++.-..|.-.+=+..+.....|+|||+
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            357899999999998877777777643322   11     1234678999999997666665555666667778999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      +|..|.+++.       ..       ...++..+=.-+.-||   ..+|+|+||.++||++..++ +.++|||++...
T Consensus        82 ~G~~lkd~l~-------~~-------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s  141 (204)
T COG3642          82 EGELLKDALE-------EA-------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS  141 (204)
T ss_pred             CChhHHHHHH-------hc-------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence            9999999985       22       2567788888899999   99999999999999998655 999999999754

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.39  E-value=6.9e-12  Score=104.74  Aligned_cols=141  Identities=17%  Similarity=0.222  Sum_probs=109.4

Q ss_pred             CceeecCCeEEEEEEeC-CeEEEEEEecCCCc-hhHHHHHHHHHHHhhccC--CcceeeeeeeeeC---CceEEEEEecc
Q 045682           64 KVIMKRSFYTLYKGFCQ-ERLISVMKFDASKP-RMYDCCINNIVYASQMIH--RCFFKLIGCCLET---QIPILVFEYIN  136 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--~niv~l~g~~~~~---~~~~lv~e~~~  136 (309)
                      +.||.|.++.||++... |..+++|....... .....+..|+.++..+.+  .++++++.+....   +..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            45899999999999884 48999998755432 134568899999999965  4567788777654   36789999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG-------------------------------------  179 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-------------------------------------  179 (309)
                      +.++.+.+.        ...++..+...++.+++++|.+||..                                     
T Consensus        84 G~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (223)
T cd05154          84 GRVLRDRLL--------RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP  155 (223)
T ss_pred             CEecCCCCC--------CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence            988887642        14577777888888888888888842                                     


Q ss_pred             ----------------CCCCeEeCCCCCCCeeecC--CCcEEEeecccccc
Q 045682          180 ----------------FPRPVIFRDFKLSNILFNE--ENVAKLFDFSFSIS  212 (309)
Q Consensus       180 ----------------~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~  212 (309)
                                      ....++|+|+.|.||+++.  ++.+.|+||+.+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                            0245799999999999998  67789999998754

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.32  E-value=1e-12  Score=125.93  Aligned_cols=189  Identities=19%  Similarity=0.251  Sum_probs=124.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ..+|+..++|..|+||.||..++  +.+.+|+ +++++.     -+.+.  ++.....|.+|                  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~-----lilRn--ilt~a~npfvv------------------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN-----LILRN--ILTFAGNPFVV------------------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhh-cccccc-----hhhhc--cccccCCccee------------------
Confidence            46799999999999999999998  5688888 444332     11111  22223344433                  


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                         |+=...++       ..++++...        +.+++|||   ..+|+|||+||+|.+|+.=|.+|++|||+++...
T Consensus       136 ---gDc~tllk-------~~g~lPvdm--------vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GL  194 (1205)
T KOG0606|consen  136 ---GDCATLLK-------NIGPLPVDM--------VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL  194 (1205)
T ss_pred             ---chhhhhcc-------cCCCCcchh--------hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhh
Confidence               34444444       334444332        78999999   9999999999999999999999999999987653


Q ss_pred             CC-------------------ccccccccccccccccCC------CcccHHHHHHHH------hhcccccccccccccCC
Q 045682          215 EG-------------------ELLTGLRAFDLARLNEDD------GYVALRDHVKKY------FEEDRLNEIIDPLIMGD  263 (309)
Q Consensus       215 ~~-------------------~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~  263 (309)
                      ..                   .-++|.+-|-+++.....      ++|.++...+++      |.+....+++..++..+
T Consensus       195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~  274 (1205)
T KOG0606|consen  195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD  274 (1205)
T ss_pred             hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh
Confidence            22                   134555555555443332      334555555554      33444455566665554


Q ss_pred             CCCCc-hHHHHHHHHHHHHHcccCCCCCCC
Q 045682          264 RSCSG-KEQQLQAYAHLIFECVNESPVDRP  292 (309)
Q Consensus       264 ~~~~~-~~~~~~~l~~li~~Cl~~~P~~RP  292 (309)
                      ..++. ....+.+..+++.+.|+.+|.+|-
T Consensus       275 i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  275 IEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             ccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence            44432 224458899999999999999993

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.32  E-value=6.8e-11  Score=109.08  Aligned_cols=209  Identities=14%  Similarity=0.076  Sum_probs=146.1

Q ss_pred             CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCH
Q 045682           80 QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLL  159 (309)
Q Consensus        80 ~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~  159 (309)
                      ++.+|.|...+...........+.++.|+.++||||++++..+..++..|||+|.+.  .|..+++.          +..
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~----------l~~  103 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE----------LGK  103 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH----------hHH
Confidence            778888888877765445667788999999999999999999999999999999985  78888762          224


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc--------cccccccccccccc
Q 045682          160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE--------LLTGLRAFDLARLN  231 (309)
Q Consensus       160 ~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--------~~~g~~~~~~~~~~  231 (309)
                      ....--+.||+.||.|||+  ..+++|++|....|+|+..|.-||++|.++.......        +.+-..|.......
T Consensus       104 ~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~  181 (690)
T KOG1243|consen  104 EEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE  181 (690)
T ss_pred             HHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc
Confidence            4555678999999999987  7899999999999999999999999998875543221        12222333222222


Q ss_pred             cCCCcccHHHHHHHHhhcccccccccccccCCCCCCchH-----------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          232 EDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKE-----------QQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      ..-+.+.++..+|+.+.+ ......+....+..+-....           .-+. ..+++..|...-+--|=-+-+++..
T Consensus       182 ~s~D~~~Lg~li~el~ng-~~~~~~~~~~~~~ipk~~~~~~~k~~~~~~~~r~n-~~~~~~~~~~~~gff~n~fvd~~~f  259 (690)
T KOG1243|consen  182 WSIDSWGLGCLIEELFNG-SLLTKTDLSNTGKIPKALIELYCKKLGATELKRPN-KLRFILECRLLGGFFRNDFVDTLLF  259 (690)
T ss_pred             cchhhhhHHHHHHHHhCc-ccCcchhhhccCccchhHHHHHHHHhccccccccc-hhhHHHHHHhccccccchHHHHHHH
Confidence            223677888889999887 44444444444443300000           0011 4556666766666666666666666


Q ss_pred             HHHH
Q 045682          301 LKQM  304 (309)
Q Consensus       301 L~~l  304 (309)
                      |+++
T Consensus       260 Leel  263 (690)
T KOG1243|consen  260 LEEL  263 (690)
T ss_pred             HHhc
Confidence            6554

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.29  E-value=3.4e-13  Score=127.50  Aligned_cols=233  Identities=15%  Similarity=0.167  Sum_probs=161.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe---CCeEEEEEEecCCC--chhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC---QERLISVMKFDASK--PRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~l  130 (309)
                      ...|....-||+|+|+.|-....   ....+|+|.+....  .........|..+-..+. |+|++.+++........++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            44566677799999999988776   44667777765543  233344556777777785 9999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeeccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSF  209 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~  209 (309)
                      +++|..++++.+.+. +    ......+......++.|+..++.|+|.  ..++.|+|+||+|.+++..+ +.+++|||+
T Consensus        99 ~~~~s~g~~~f~~i~-~----~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~  171 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKIS-H----PDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGL  171 (601)
T ss_pred             ccCcccccccccccc-c----CCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchh
Confidence            999999999999872 0    122256677778899999999999996  68999999999999999999 999999999


Q ss_pred             ccccCC-Cc------cccc-cccccccccccCC-------CcccHHHHHHHHhhcccc-----------cccccccccCC
Q 045682          210 SISIPE-GE------LLTG-LRAFDLARLNEDD-------GYVALRDHVKKYFEEDRL-----------NEIIDPLIMGD  263 (309)
Q Consensus       210 a~~~~~-~~------~~~g-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~g~  263 (309)
                      |..... +.      ...| ..|+.+++.....       +.|+.+.....+..+...           .......  +.
T Consensus       172 At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~  249 (601)
T KOG0590|consen  172 ATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK--GR  249 (601)
T ss_pred             hccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc--cc
Confidence            987765 22      3456 6677666654432       112222221111111110           1111110  00


Q ss_pred             CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          264 RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       264 ~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      ....+.........++...++..+|..|.+.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  250 FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             cccCccccCChhhhhcccccccCCchhcccccccc
Confidence            01111224456678899999999999999988874

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.24  E-value=2.8e-10  Score=97.42  Aligned_cols=141  Identities=10%  Similarity=-0.003  Sum_probs=102.2

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCCch-hHH----------HHHHHHHHHhhccCCcce--eeeeeeee-----C
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPR-MYD----------CCINNIVYASQMIHRCFF--KLIGCCLE-----T  125 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~-~~~----------~~~~e~~~l~~l~h~niv--~l~g~~~~-----~  125 (309)
                      +.+-+.....|.+..+.|+.+.||+....... ..+          .+.+|...+..|...+|.  .++++...     .
T Consensus        28 e~v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~  107 (268)
T PRK15123         28 EVFRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT  107 (268)
T ss_pred             cEEecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence            44444444457788789999999987543311 111          377899999888544443  44445432     2


Q ss_pred             CceEEEEEeccCC-ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC------
Q 045682          126 QIPILVFEYINCG-SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE------  198 (309)
Q Consensus       126 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~------  198 (309)
                      ...++|||++++. +|.+++...     ...+.+...+..++.+++..+.-||   ..+|+|+|++++|||++.      
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~-----~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~  179 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADW-----ATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGRE  179 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhh-----cccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCC
Confidence            3578999999986 899997411     1234556677899999999999999   999999999999999975      


Q ss_pred             -CCcEEEeecccccc
Q 045682          199 -ENVAKLFDFSFSIS  212 (309)
Q Consensus       199 -~~~~kl~Dfg~a~~  212 (309)
                       ++.+.++||+.+..
T Consensus       180 ~~~~~~LIDl~r~~~  194 (268)
T PRK15123        180 EDLKLSVIDLHRAQI  194 (268)
T ss_pred             CCceEEEEECCcccc
Confidence             46899999998753

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.23  E-value=3.3e-10  Score=101.74  Aligned_cols=219  Identities=9%  Similarity=0.038  Sum_probs=144.7

Q ss_pred             CeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeee----eCCceEEEEEeccC-CChhhh
Q 045682           71 FYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL----ETQIPILVFEYINC-GSLADR  143 (309)
Q Consensus        71 ~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~----~~~~~~lv~e~~~~-gsL~~~  143 (309)
                      ..+.|++..  +|..+.+|+++............-+++++++.|+|||++..++.    .+....+||+|.++ ++|.++
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            457899988  99999999996554444434456688899999999999999886    35678999999986 477776


Q ss_pred             hhhhCCC--------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          144 IRIQHNP--------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       144 l~~~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      -......        ..++..+++..+|.++.|+..||.++|   +.|...+-|.|.+||++.+..++|+..|+.-...+
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            5321110        123556788999999999999999999   89999999999999999999999999988765543


Q ss_pred             CccccccccccccccccCCCcccHHHHHHHHhhcccccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHH
Q 045682          216 GELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMV  295 (309)
Q Consensus       216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~  295 (309)
                      +.    ..|.   +.....+...++..+..+..+..-...-|........ ......+.++++++.-....++++ -++.
T Consensus       446 d~----~~~l---e~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~-~I~~~yS~D~rn~v~yl~s~~~~~-ksI~  516 (655)
T KOG3741|consen  446 DP----TEPL---ESQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLT-RITTTYSTDLRNVVEYLESLNFRE-KSIQ  516 (655)
T ss_pred             CC----Ccch---hHHhhhhHHHHHHHHHHHhhcccccccccchHHHHHH-HhhhhhhHHHHHHHHHHHhcCccc-ccHH
Confidence            32    0111   1111113333333333332221100000000000000 011256677888888888888887 6777


Q ss_pred             HHHHHH
Q 045682          296 DVAKKL  301 (309)
Q Consensus       296 ~l~~~L  301 (309)
                      +++.++
T Consensus       517 ~llp~~  522 (655)
T KOG3741|consen  517 DLLPMI  522 (655)
T ss_pred             HHHHHH
Confidence            776553

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.17  E-value=2.8e-10  Score=92.01  Aligned_cols=124  Identities=16%  Similarity=0.227  Sum_probs=81.9

Q ss_pred             EEEEEEe-CCeEEEEEEecCCCc-------------h-------------hHHHHHHHHHHHhhccCC--cceeeeeeee
Q 045682           73 TLYKGFC-QERLISVMKFDASKP-------------R-------------MYDCCINNIVYASQMIHR--CFFKLIGCCL  123 (309)
Q Consensus        73 ~V~~~~~-~~~~vavK~~~~~~~-------------~-------------~~~~~~~e~~~l~~l~h~--niv~l~g~~~  123 (309)
                      .||.|.. ++..+|+|.......             .             ......+|++.|.++...  ++++++++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            4899998 889999997633110             0             112356899999999655  567776542 


Q ss_pred             eCCceEEEEEecc--CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHH-hhcCCCCCeEeCCCCCCCeeecCCC
Q 045682          124 ETQIPILVFEYIN--CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY-LHVGFPRPVIFRDFKLSNILFNEEN  200 (309)
Q Consensus       124 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~y-LH~~~~~~iiH~dlkp~Nill~~~~  200 (309)
                         .-.|||||++  |..+..+..         ..++......++.+++..+.. +|   ..+++|+||.+.||+++++ 
T Consensus        80 ---~~~ivME~I~~~G~~~~~l~~---------~~~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-  143 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLPRLKD---------VDLSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-  143 (188)
T ss_dssp             ---TTEEEEE--EETTEEGGCHHH---------CGGGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-
T ss_pred             ---CCEEEEEecCCCccchhhHHh---------ccccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-
Confidence               3479999999  656655432         122234456778888885555 57   8999999999999999977 


Q ss_pred             cEEEeeccccccc
Q 045682          201 VAKLFDFSFSISI  213 (309)
Q Consensus       201 ~~kl~Dfg~a~~~  213 (309)
                      .+.|+|||.+...
T Consensus       144 ~~~iIDf~qav~~  156 (188)
T PF01163_consen  144 KVYIIDFGQAVDS  156 (188)
T ss_dssp             CEEE--GTTEEET
T ss_pred             eEEEEecCcceec
Confidence            9999999977543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.16  E-value=2.7e-11  Score=110.37  Aligned_cols=247  Identities=16%  Similarity=0.148  Sum_probs=164.7

Q ss_pred             cccHHH-HHHHhcCCCccCceeecCCeEEEEEEe---CCeEEEEEEecCCCchhHHH--HHHHHHHHhhc-cCCcceeee
Q 045682           47 TFSAKE-LEIATNNYDSEKVIMKRSFYTLYKGFC---QERLISVMKFDASKPRMYDC--CINNIVYASQM-IHRCFFKLI  119 (309)
Q Consensus        47 ~~~~~~-~~~~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~l~  119 (309)
                      .|...+ ....+.+|.....||.|.|+.|+....   ++..+++|.+...-.....+  -+.|+-+...+ .|.++++.+
T Consensus       253 i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~  332 (524)
T KOG0601|consen  253 IFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN  332 (524)
T ss_pred             eecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence            344444 445667888899999999999998776   57889999886654332222  24566666666 799999988


Q ss_pred             eeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          120 GCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       120 g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                      ..+......++=-|||.++++.....       ....+++..++++..|++.++.++|   ++.++|+|++|+||++..+
T Consensus       333 ~~W~~~r~~~ip~e~~~~~s~~l~~~-------~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~  402 (524)
T KOG0601|consen  333 SSWSQLRQGYIPLEFCEGGSSSLRSV-------TSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISND  402 (524)
T ss_pred             CCccccccccCchhhhcCcchhhhhH-------HHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccc
Confidence            88777777778899999998887764       4567888888999999999999999   9999999999999999876


Q ss_pred             -CcEEEeecccccccCCCc----cccccccccccccccCC------CcccHHHHHHHHhhcccccc---cccccccCCCC
Q 045682          200 -NVAKLFDFSFSISIPEGE----LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRLNE---IIDPLIMGDRS  265 (309)
Q Consensus       200 -~~~kl~Dfg~a~~~~~~~----~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~  265 (309)
                       +..++.|||.+..+.-..    -..+..| ......+..      +.+++...+.+...+..+.+   -...+..|..+
T Consensus       403 ~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p-~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~~~~p  481 (524)
T KOG0601|consen  403 GFFSKLGDFGCWTRLAFSSGVFHHIDRLYP-IAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIRSGDTP  481 (524)
T ss_pred             hhhhhccccccccccceecccccccccccc-cchhhccccccccccccccccccccccccCcccCcccccceeeeccccc
Confidence             788999999885432222    1222222 011111111      11222222222222221111   11222233333


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ...  ....++..+..-...++|..||.+.++....+-...
T Consensus       482 ~~~--~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~  520 (524)
T KOG0601|consen  482 NLP--GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD  520 (524)
T ss_pred             CCC--chHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence            222  333778889999999999999999988766554443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.11  E-value=1.6e-10  Score=98.13  Aligned_cols=99  Identities=20%  Similarity=0.340  Sum_probs=82.8

Q ss_pred             HHHHhhccCCcceeeeeeeeeC-----CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 045682          104 IVYASQMIHRCFFKLIGCCLET-----QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHV  178 (309)
Q Consensus       104 ~~~l~~l~h~niv~l~g~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~  178 (309)
                      +.-|-++.|.|||+++.++.+.     .+..+++||+..|++.+||+....   .+..++.....+++-||..||.|||.
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~---~~~a~~~~~wkkw~tqIlsal~yLhs  194 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK---NQKALFQKAWKKWCTQILSALSYLHS  194 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH---hhhhhhHHHHHHHHHHHHhhhhhhhc
Confidence            3445566899999999998653     357789999999999999975432   45667777888999999999999996


Q ss_pred             CCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          179 GFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       179 ~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      . +.+|+|+++...-|++..+|.+||.-
T Consensus       195 ~-~PpiihgnlTc~tifiq~ngLIkig~  221 (458)
T KOG1266|consen  195 C-DPPIIHGNLTCDTIFIQHNGLIKIGS  221 (458)
T ss_pred             c-CCccccCCcchhheeecCCceEEecc
Confidence            5 78999999999999999999999864

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.11  E-value=1.2e-10  Score=106.25  Aligned_cols=229  Identities=16%  Similarity=0.135  Sum_probs=153.9

Q ss_pred             CCccCceee--cCCeEEEEEEe----CCeEEEEEEecC--CCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEE
Q 045682           60 YDSEKVIMK--RSFYTLYKGFC----QERLISVMKFDA--SKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        60 ~~~~~~lg~--G~~g~V~~~~~----~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  130 (309)
                      |.....+|.  |.+|.||.+..    ++..+|+|+-+.  ..+.....=.+|+...+.+ .|+|.++.+..+..++..++
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi  195 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI  195 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence            555677899  99999999987    568889988433  2234444456777777788 79999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCCCeEeCCCCCCCeeecCC-CcEEEe
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN----AIAYLHVGFPRPVIFRDFKLSNILFNEE-NVAKLF  205 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~----~l~yLH~~~~~~iiH~dlkp~Nill~~~-~~~kl~  205 (309)
                      -+|++. .+|.++..      ....-++...++.++.+...    |+.++|   ..+++|-|+||.||+...+ ..++++
T Consensus       196 qtE~~~-~sl~~~~~------~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~  265 (524)
T KOG0601|consen  196 QTELCG-ESLQSYCH------TPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLT  265 (524)
T ss_pred             eecccc-chhHHhhh------cccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecC
Confidence            999997 58888864      12333677777888888888    999999   9999999999999999999 889999


Q ss_pred             ecccccccCCCcccc---------cccccccccccc-----CCCcccHHHHHHHHhhcc---ccc--ccccccccCCCCC
Q 045682          206 DFSFSISIPEGELLT---------GLRAFDLARLNE-----DDGYVALRDHVKKYFEED---RLN--EIIDPLIMGDRSC  266 (309)
Q Consensus       206 Dfg~a~~~~~~~~~~---------g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~g~~~~  266 (309)
                      |||+...+.+..+..         |..-|.+++...     .++.+++...+....-+.   ...  ....+.-.+..+.
T Consensus       266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~  345 (524)
T KOG0601|consen  266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL  345 (524)
T ss_pred             CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence            999988776554221         111122222111     112223332222221110   001  1122222222222


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      ......+.++...+.++++++|..|++...+.
T Consensus       346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~  377 (524)
T KOG0601|consen  346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT  377 (524)
T ss_pred             hhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence            22223356677799999999999999988765

>PRK09902 hypothetical protein; Provisional

Probab=99.08  E-value=6.8e-09  Score=84.63  Aligned_cols=155  Identities=14%  Similarity=0.033  Sum_probs=112.7

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCC---C---chhHHHHHHHHHHHhhccCCc--ceeeeee
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDAS---K---PRMYDCCINNIVYASQMIHRC--FFKLIGC  121 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~---~~~~~~~~~e~~~l~~l~h~n--iv~l~g~  121 (309)
                      ++.+-.....+...---|.||.+-|++-.+.|..+-+|+-...   +   +.....|.+|+..+.++...+  ++++..+
T Consensus        10 f~~~w~~~~~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~   89 (216)
T PRK09902         10 FNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFG   89 (216)
T ss_pred             HHHHHhCCCceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCcccee
Confidence            4444444444433333477999999998888888999986521   1   334577999999999995333  4455522


Q ss_pred             eee----CCceEEEEEeccC-CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee
Q 045682          122 CLE----TQIPILVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF  196 (309)
Q Consensus       122 ~~~----~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill  196 (309)
                      ...    .-..+||+|-+++ -+|.+++..     ....+.+...+..++.+++..++-||   ..++.|+|+.+.||++
T Consensus        90 ~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~-----~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll  161 (216)
T PRK09902         90 EAVKIEGEWRALLVTEDMAGFISIADWYAQ-----HAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYV  161 (216)
T ss_pred             eeeccCCceEEEEEEEeCCCCccHHHHHhc-----CCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheee
Confidence            211    1246899998875 399999851     12345677788899999999999999   9999999999999999


Q ss_pred             cCCCc--EEEeecccccc
Q 045682          197 NEENV--AKLFDFSFSIS  212 (309)
Q Consensus       197 ~~~~~--~kl~Dfg~a~~  212 (309)
                      +.++.  ++++||.-++.
T Consensus       162 ~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        162 KTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             cCCCCeeEEEEEhhccch
Confidence            87777  99999986543

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.03  E-value=1.8e-09  Score=90.25  Aligned_cols=132  Identities=16%  Similarity=0.083  Sum_probs=95.0

Q ss_pred             CCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCc----------------------hhHHHHHHHHHHHhhccCC--c
Q 045682           60 YDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKP----------------------RMYDCCINNIVYASQMIHR--C  114 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l~h~--n  114 (309)
                      ...+..||.|.-+.||.|.. .|.++|||.-....+                      .......+|.++|..|...  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            44578899999999999999 799999995422110                      0112346899999999544  7


Q ss_pred             ceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       115 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                      |++.+++-    .-.+||||++|-.|...            .++....-.++..|+.-+.-+-   ..++||+|+++-||
T Consensus       173 VP~P~~~n----RHaVvMe~ieG~eL~~~------------r~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNI  233 (304)
T COG0478         173 VPKPIAWN----RHAVVMEYIEGVELYRL------------RLDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNI  233 (304)
T ss_pred             CCCccccc----cceeeeehcccceeecc------------cCcccCHHHHHHHHHHHHHHHH---HcCccccCCchheE
Confidence            77777643    34799999998666654            1122233345555555555555   68999999999999


Q ss_pred             eecCCCcEEEeecccc
Q 045682          195 LFNEENVAKLFDFSFS  210 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a  210 (309)
                      ++++||.+.++||--+
T Consensus       234 lV~~dg~~~vIDwPQ~  249 (304)
T COG0478         234 LVTEDGDIVVIDWPQA  249 (304)
T ss_pred             EEecCCCEEEEeCccc
Confidence            9999999999999543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.00  E-value=4.5e-09  Score=86.90  Aligned_cols=106  Identities=19%  Similarity=0.156  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHhhccCCc--ceeeeeeeeeCC----ceEEEEEeccCC-ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHH
Q 045682           98 DCCINNIVYASQMIHRC--FFKLIGCCLETQ----IPILVFEYINCG-SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA  170 (309)
Q Consensus        98 ~~~~~e~~~l~~l~h~n--iv~l~g~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia  170 (309)
                      ....+|...+..+....  ++..+++.....    ..++|+|++++. +|.+++.       .....+......++.+++
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~-------~~~~~~~~~~~~ll~~l~  128 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ-------QWEQLDPSQRRELLRALA  128 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH-------hhcccchhhHHHHHHHHH
Confidence            45778888888885443  456666665422    458999999874 8999986       222366677789999999


Q ss_pred             HHHHHhhcCCCCCeEeCCCCCCCeeecCCC---cEEEeeccccccc
Q 045682          171 NAIAYLHVGFPRPVIFRDFKLSNILFNEEN---VAKLFDFSFSISI  213 (309)
Q Consensus       171 ~~l~yLH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~  213 (309)
                      ..++-||   ..+|+|+|++|.|||++.++   .+.++||+-++..
T Consensus       129 ~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  129 RLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            9999999   99999999999999998887   8999999977643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.92  E-value=5e-10  Score=100.67  Aligned_cols=160  Identities=22%  Similarity=0.229  Sum_probs=105.1

Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      .+|+.|++|.-.+|.+||..-    .....-++...+.++.|++.|+.|      ++.+|+|+||.||+...+..+||.|
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr----~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgD  399 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRR----RTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGD  399 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCC----CcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhh
Confidence            478999999999999998511    234556777889999999999998      6899999999999999999999999


Q ss_pred             cccccccCCCc----------cccccccccccccccC------CCcccHHHHHHHHhhccc----ccccccccccCCCCC
Q 045682          207 FSFSISIPEGE----------LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDR----LNEIIDPLIMGDRSC  266 (309)
Q Consensus       207 fg~a~~~~~~~----------~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~  266 (309)
                      ||+........          ...|..-|..|+...+      .+.+.++..+.+++...+    -...+..+-.|..|+
T Consensus       400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~  479 (516)
T KOG1033|consen  400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPP  479 (516)
T ss_pred             hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCCh
Confidence            99987665544          2334444444443222      123444444444433111    111223333344442


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDV  297 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l  297 (309)
                      ..-.+. ++-+.|+++++.+.|.+||++.+.
T Consensus       480 ~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  480 EFLQDY-PEEYTLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             HHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence            222122 334579999999999999955443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.82  E-value=1.6e-07  Score=87.09  Aligned_cols=142  Identities=13%  Similarity=0.054  Sum_probs=91.6

Q ss_pred             CceeecCCeEEEEEEe-CCeEEEEEEecCCCchh------------------------------HH----------HHHH
Q 045682           64 KVIMKRSFYTLYKGFC-QERLISVMKFDASKPRM------------------------------YD----------CCIN  102 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~------------------------------~~----------~~~~  102 (309)
                      +-|+.++-|+||+|++ +|+.||||+..+.-...                              .+          .+.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            4689999999999999 79999999875532110                              00          1234


Q ss_pred             HHHHHhhc-----cCCcceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 045682          103 NIVYASQM-----IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLH  177 (309)
Q Consensus       103 e~~~l~~l-----~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH  177 (309)
                      |+..+.++     +.+++.-..-+..-.+...|+|||++|..+.+.....      ...++...+.....++.  +.-+-
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~------~~g~d~k~ia~~~~~~f--~~q~~  282 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK------SAGIDRKELAELLVRAF--LRQLL  282 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH------hcCCCHHHHHHHHHHHH--HHHHH
Confidence            44444444     2333322222222346678999999999999985322      23444333222222221  22222


Q ss_pred             cCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          178 VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       178 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                         ..+++|.|..|.||+++.+|.+-+.|||+....++.
T Consensus       283 ---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         283 ---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             ---hcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence               458999999999999999999999999998766553

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.77  E-value=2e-07  Score=78.17  Aligned_cols=142  Identities=11%  Similarity=0.046  Sum_probs=86.0

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCc--ceeeeeeeeeCCceEEEEEeccCCC-h
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRC--FFKLIGCCLETQIPILVFEYINCGS-L  140 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~g~~~~~~~~~lv~e~~~~gs-L  140 (309)
                      ..||+|..+.||+.  .+..+++|......  ......+|.+++..+..-.  +++.+++....+...+|||+++|.+ +
T Consensus         7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             eeecCCCCcceeEe--cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            46899999999984  35567788765532  2345688999999985433  5778888877777889999999863 2


Q ss_pred             hhhh------------------h-hhCCCCCCCCCCCHHHHHHHHH----------HHHH-HHHHhhc-CCCCCeEeCCC
Q 045682          141 ADRI------------------R-IQHNPQPQHEPLLLTHRLKIAK----------DIAN-AIAYLHV-GFPRPVIFRDF  189 (309)
Q Consensus       141 ~~~l------------------~-~~~~~~~~~~~l~~~~~~~i~~----------~ia~-~l~yLH~-~~~~~iiH~dl  189 (309)
                      ...+                  . .|..+. ....++.. ...+..          .+.. ...+|.. .....++|+|+
T Consensus        83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~-~~~~l~~~-~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~  160 (226)
T TIGR02172        83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKC-DTSTFQSY-KEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF  160 (226)
T ss_pred             hhhhcCCHHHHHHHHHHHHHHHHHHhCCCC-CCCcHHHH-HHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence            1111                  0 121100 11111100 000000          0001 1122221 11345789999


Q ss_pred             CCCCeeecCCCcEEEeecccccc
Q 045682          190 KLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       190 kp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      .|.||++++++ +.|+||+.+..
T Consensus       161 ~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       161 QIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCCcEEEcCCC-cEEEechhcCc
Confidence            99999999888 99999998753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.69  E-value=2.8e-07  Score=76.42  Aligned_cols=150  Identities=16%  Similarity=0.148  Sum_probs=98.3

Q ss_pred             ccHHHHHHHhcCCCccCc---eeecCCeEEEEEEe-CCeEEEEEEecCCCchhH-------------------H-----H
Q 045682           48 FSAKELEIATNNYDSEKV---IMKRSFYTLYKGFC-QERLISVMKFDASKPRMY-------------------D-----C   99 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~---lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~-------------------~-----~   99 (309)
                      .+...+...........+   |+.|.-+.||+|.- ++..+|+|+.........                   +     -
T Consensus        35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W  114 (268)
T COG1718          35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW  114 (268)
T ss_pred             HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence            344555554555544444   55566668999987 789999998855321111                   1     1


Q ss_pred             HHHHHHHHhhc--cCCcceeeeeeeeeCCceEEEEEeccCC-ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 045682          100 CINNIVYASQM--IHRCFFKLIGCCLETQIPILVFEYINCG-SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL  176 (309)
Q Consensus       100 ~~~e~~~l~~l--~h~niv~l~g~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yL  176 (309)
                      ...|+..|.++  .+-.+++.+++..    -.|||||+... .-.-.|        ...++.......+..++++.+.-|
T Consensus       115 ~~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~L--------kDv~~e~~e~~~~~~~~v~~~~~l  182 (268)
T COG1718         115 ARKEFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRL--------KDVPLELEEAEGLYEDVVEYMRRL  182 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCc--------ccCCcCchhHHHHHHHHHHHHHHH
Confidence            23567777776  3445555555442    36999999653 222222        123333335677888888888888


Q ss_pred             hcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       177 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      -.  ..++||+||+.-|||+. ++.+.|+|||-|..
T Consensus       183 ~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~  215 (268)
T COG1718         183 YK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVT  215 (268)
T ss_pred             HH--hcCcccccchhhheEEE-CCeEEEEECccccc
Confidence            82  38999999999999999 89999999997643

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.69  E-value=4.9e-07  Score=74.13  Aligned_cols=138  Identities=17%  Similarity=0.063  Sum_probs=93.6

Q ss_pred             HhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHH---------HHHHHHhhcc---CCcceeeeeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCI---------NNIVYASQMI---HRCFFKLIGCCL  123 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~---------~e~~~l~~l~---h~niv~l~g~~~  123 (309)
                      ..++|...+++-......|.+-..++..+++|..........+.|.         +.+..+..+.   -...+.++-+..
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e  108 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE  108 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence            4566777777877777788887779999999987665433222222         2333333332   222333333322


Q ss_pred             e-----CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC
Q 045682          124 E-----TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE  198 (309)
Q Consensus       124 ~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~  198 (309)
                      .     ....+++|||++|..|.++..           ++.    .++..++.++.-+|   ..|++|+|..|.|++++.
T Consensus       109 kk~~~~~~~~~ll~EYIeG~~l~d~~~-----------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  109 KKIFRYTSSYVLLMEYIEGVELNDIED-----------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSN  170 (229)
T ss_pred             eeeccceeEEEEEEEEecCeecccchh-----------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEEC
Confidence            1     234568999999998888742           222    35567788899999   999999999999999985


Q ss_pred             CCcEEEeecccccc
Q 045682          199 ENVAKLFDFSFSIS  212 (309)
Q Consensus       199 ~~~~kl~Dfg~a~~  212 (309)
                      ++ ++++||+..+.
T Consensus       171 ~~-i~iID~~~k~~  183 (229)
T PF06176_consen  171 NG-IRIIDTQGKRM  183 (229)
T ss_pred             Cc-EEEEECccccc
Confidence            55 99999986543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.66  E-value=5e-07  Score=76.70  Aligned_cols=142  Identities=12%  Similarity=-0.007  Sum_probs=87.5

Q ss_pred             eeecCC-eEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccCCChhhh
Q 045682           66 IMKRSF-YTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINCGSLADR  143 (309)
Q Consensus        66 lg~G~~-g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~  143 (309)
                      |-.|.+ ..||+....+..+.+|......   ...+..|++++..+ .+--+++++++...++..++|||+++|.++...
T Consensus         6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150           6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            334444 6899998766788888865543   34567899999888 455567888887776778999999998777644


Q ss_pred             h----------------h-hhCCCCCCCCCCCHH--HHHHH-----------------------HHHHHHHHHHhh-cCC
Q 045682          144 I----------------R-IQHNPQPQHEPLLLT--HRLKI-----------------------AKDIANAIAYLH-VGF  180 (309)
Q Consensus       144 l----------------~-~~~~~~~~~~~l~~~--~~~~i-----------------------~~~ia~~l~yLH-~~~  180 (309)
                      .                . .|.-+. ...+....  .....                       ..++...|.-.. ...
T Consensus        83 ~~~~~~~~~~~~l~~~l~~lH~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (244)
T cd05150          83 WEELEPERLVDALAEALRRLHALPV-ADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE  161 (244)
T ss_pred             hcccCHHHHHHHHHHHHHHHhcCCc-ccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence            2                1 121111 11111100  00000                       111111111111 011


Q ss_pred             CCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          181 PRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       181 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      ...++|+|+.|.|||+++++.+.|+||+.+.
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            4569999999999999998888999999774

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.56  E-value=3.8e-07  Score=74.02  Aligned_cols=105  Identities=26%  Similarity=0.270  Sum_probs=81.9

Q ss_pred             HHHHHHHhhccC-CcceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 045682          101 INNIVYASQMIH-RCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG  179 (309)
Q Consensus       101 ~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~  179 (309)
                      .+|.-++..+++ +++++++|+|-.    ++++||.+.+++...-.    .......-+|..+.+||.++++.+.++++.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~----~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~   78 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYR----PLSQFLQSPWEQRAKIALQLLELLEELDHG   78 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccc----ccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence            357888888855 699999999944    67899998775542100    000224578999999999999999999975


Q ss_pred             CCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          180 FPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       180 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      ....+.-.|++|+|+-++++|.+|++|...+...
T Consensus        79 ~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   79 PLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             CCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            4466888899999999999999999999866544

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.55  E-value=1.4e-06  Score=80.75  Aligned_cols=139  Identities=13%  Similarity=0.066  Sum_probs=92.7

Q ss_pred             CceeecCCeEEEEEEe-CCeEEEEEEecCCCchh-------------------------------HH------HHHHHHH
Q 045682           64 KVIMKRSFYTLYKGFC-QERLISVMKFDASKPRM-------------------------------YD------CCINNIV  105 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~-------------------------------~~------~~~~e~~  105 (309)
                      +-||.-+.|+||+|+. +|+.||||.-++.-...                               .+      .|.+|++
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            4689999999999999 99999999865532110                               00      1233443


Q ss_pred             HHhhc----cCCc------ceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 045682          106 YASQM----IHRC------FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY  175 (309)
Q Consensus       106 ~l~~l----~h~n------iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~y  175 (309)
                      ...++    .|-+      |++++-.+  .....|+|||++|..+.+.-..      ....++...+..-+.++..-+-+
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i------~~~gi~~~~i~~~l~~~~~~qIf  318 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAI------DKRGISPHDILNKLVEAYLEQIF  318 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHH------HHcCCCHHHHHHHHHHHHHHHHH
Confidence            33333    3444      33333222  3467899999999987776432      34556666555555555444444


Q ss_pred             hhcCCCCCeEeCCCCCCCeeecC----CCcEEEeecccccccCC
Q 045682          176 LHVGFPRPVIFRDFKLSNILFNE----ENVAKLFDFSFSISIPE  215 (309)
Q Consensus       176 LH~~~~~~iiH~dlkp~Nill~~----~~~~kl~Dfg~a~~~~~  215 (309)
                      .|     |++|+|-.|.||+++.    ++.+.+.|||+....+.
T Consensus       319 ~~-----GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  319 KT-----GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             hc-----CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            44     6999999999999984    67899999998776544

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.55  E-value=1.6e-06  Score=72.74  Aligned_cols=146  Identities=14%  Similarity=0.190  Sum_probs=86.1

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC--cceeeeeeeee---CCceEEEEEeccCC
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHR--CFFKLIGCCLE---TQIPILVFEYINCG  138 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~g~~~~---~~~~~lv~e~~~~g  138 (309)
                      +.|+.|..+.||+...++..+++|.....  .....+.+|..++..+...  .+++++.+...   ....+++|+++++.
T Consensus         3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~   80 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR   80 (239)
T ss_dssp             EEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred             ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence            46899999999999996689999996554  4456788899999888433  35677765433   33578999999998


Q ss_pred             Chhh----------------hhhh-hCCCCCCCCCCCHHHH---------HHH------------HHHHHH-HHHHhhc-
Q 045682          139 SLAD----------------RIRI-QHNPQPQHEPLLLTHR---------LKI------------AKDIAN-AIAYLHV-  178 (309)
Q Consensus       139 sL~~----------------~l~~-~~~~~~~~~~l~~~~~---------~~i------------~~~ia~-~l~yLH~-  178 (309)
                      ++..                .+.. +... .......+...         ...            ...+.. .+..++. 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (239)
T PF01636_consen   81 PLDDELSPEQRPELLRQLGRALAQLHQVP-PPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL  159 (239)
T ss_dssp             EHHHTSTHHHHHHHHHHHHHHHHHHHHSH-TTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhhhhhccccc-ccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence            7777                1111 1111 11111111110         000            111222 2333331 


Q ss_pred             ---CCCCCeEeCCCCCCCeeec-CCCcEEEeecccccc
Q 045682          179 ---GFPRPVIFRDFKLSNILFN-EENVAKLFDFSFSIS  212 (309)
Q Consensus       179 ---~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~  212 (309)
                         .....++|+|+.|.||+++ +++.+-|+||+.+..
T Consensus       160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             hccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence               1257799999999999999 666668999987653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PLN02876 acyl-CoA dehydrogenase

Probab=98.48  E-value=4.2e-06  Score=83.22  Aligned_cols=78  Identities=9%  Similarity=0.017  Sum_probs=56.5

Q ss_pred             cCceeecCCeEEEEEEeCC----eEEEEEEecCCC-chhHHHHHHHHHHHhhcc-CCcc--eeeeeeeeeC---CceEEE
Q 045682           63 EKVIMKRSFYTLYKGFCQE----RLISVMKFDASK-PRMYDCCINNIVYASQMI-HRCF--FKLIGCCLET---QIPILV  131 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni--v~l~g~~~~~---~~~~lv  131 (309)
                      ...++.|.++.+|.....+    ..+++|+..... ......+.+|+.++..+. |+++  ++++++|.+.   +..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            4567889999999988733    467777754432 123356889999999994 6665  7888888764   468999


Q ss_pred             EEeccCCCh
Q 045682          132 FEYINCGSL  140 (309)
Q Consensus       132 ~e~~~~gsL  140 (309)
                      |||++|..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999998653

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.40  E-value=1.3e-05  Score=65.41  Aligned_cols=133  Identities=16%  Similarity=0.179  Sum_probs=92.1

Q ss_pred             CccCceeecCCeEEEEEEeCCeEEEEEEecCCC----------------chhHHHHHHHHHHHhhcc------CCcceee
Q 045682           61 DSEKVIMKRSFYTLYKGFCQERLISVMKFDASK----------------PRMYDCCINNIVYASQMI------HRCFFKL  118 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~e~~~l~~l~------h~niv~l  118 (309)
                      +....||+|+.=.||.-= .+....||......                ....++..+|+.....+.      +.+|.++
T Consensus         4 ~~~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CCCcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            345679999999888622 44556677665543                223466777777766665      8899999


Q ss_pred             eeeeeeCCceEEEEEeccC------CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCC
Q 045682          119 IGCCLETQIPILVFEYINC------GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLS  192 (309)
Q Consensus       119 ~g~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~  192 (309)
                      +|+..++--.-+|+|.+.+      -+|.+++.        ...++. .....+.++   ..||-   ...|+.+|++|.
T Consensus        83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~--------~~~~~~-~~~~~L~~f---~~~l~---~~~Iv~~dl~~~  147 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLK--------EGGLTE-ELRQALDEF---KRYLL---DHHIVIRDLNPH  147 (199)
T ss_pred             eEEEecCCceEEEEEEEECCCCCcCccHHHHHH--------cCCccH-HHHHHHHHH---HHHHH---HcCCeecCCCcc
Confidence            9999988878899998732      36888874        334555 334444444   45556   788999999999


Q ss_pred             CeeecCC--C--cEEEee-ccc
Q 045682          193 NILFNEE--N--VAKLFD-FSF  209 (309)
Q Consensus       193 Nill~~~--~--~~kl~D-fg~  209 (309)
                      ||++..+  +  .+.|+| ||-
T Consensus       148 NIv~~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  148 NIVVQRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             cEEEEecCCCceEEEEEeCCCC
Confidence            9999533  2  467777 553

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=3.2e-06  Score=66.59  Aligned_cols=127  Identities=10%  Similarity=-0.004  Sum_probs=89.8

Q ss_pred             ccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcce-eeeeeeeeCCceEEEEEeccCCCh
Q 045682           62 SEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF-KLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ....|++|.+|.||+|.|.+..+|+|.-...+  ....+..|+++|..+.-.++. +++.+-.    -++.|||+.|-+|
T Consensus        26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L   99 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPL   99 (201)
T ss_pred             hhhhhhcccccEEEEeeccCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcch
Confidence            35679999999999999999999999866653  346788999999999766664 4444332    2455999999888


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCC-CCCeeecCCCcEEEeeccccc
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFK-LSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlk-p~Nill~~~~~~kl~Dfg~a~  211 (309)
                      .+.-.        .  .+..++    ..++..---|-   ..+|-|..|. |...+|..++.+.|+||.-|.
T Consensus       100 ~~~~~--------~--~~rk~l----~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112         100 GKLEI--------G--GDRKHL----LRVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             hhhhh--------c--ccHHHH----HHHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence            88743        1  133333    34444433344   7788888885 444555556699999998775

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.25  E-value=2.9e-07  Score=89.38  Aligned_cols=230  Identities=13%  Similarity=0.079  Sum_probs=145.8

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ..+.+...+-+-.|.++.++.+.-  .+...+.|......   ....+....+-.++-...+|.++....-+.-....+|
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            345666667788899999887765  33223333222111   1112222333333333456777766665566778899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      +++|+.+++|...|+       ..+..+.+-.......+..+++|||   ...++|+|++|.|+|+..++..+++|||..
T Consensus       882 ~~~~~~~~~~~Skl~-------~~~~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~  951 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLH-------NSGCLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTL  951 (1205)
T ss_pred             hhHHhccCCchhhhh-------cCCCcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccc
Confidence            999999999999986       3445666666778888999999999   788999999999999999999999999843


Q ss_pred             cccCCC--------c---------------------------cccccccccccccccCCC------cccHHHHHHHH---
Q 045682          211 ISIPEG--------E---------------------------LLTGLRAFDLARLNEDDG------YVALRDHVKKY---  246 (309)
Q Consensus       211 ~~~~~~--------~---------------------------~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~---  246 (309)
                      .....-        .                           ...|...+..++...+..      +|..+....+.   
T Consensus       952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen  952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred             cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence            221100        0                           122222333333322222      23333333322   


Q ss_pred             ---hhcccccccccccccCCCCCCc-hHHHHHHHHHHHHHcccCCCCCCCCHH
Q 045682          247 ---FEEDRLNEIIDPLIMGDRSCSG-KEQQLQAYAHLIFECVNESPVDRPTMV  295 (309)
Q Consensus       247 ---~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~l~~li~~Cl~~~P~~RPt~~  295 (309)
                         +.......+++.++.+..+++. +...+.+..+++..-+..+|.+|-.+.
T Consensus      1032 ~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1032 IPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             CCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence               2233345667777777777653 345567788999999999999997664

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.20  E-value=3.2e-05  Score=66.18  Aligned_cols=141  Identities=11%  Similarity=0.028  Sum_probs=81.2

Q ss_pred             eeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCc-ceeeeeeeeeCCceEEEEEeccCCChhhh-
Q 045682           66 IMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRC-FFKLIGCCLETQIPILVFEYINCGSLADR-  143 (309)
Q Consensus        66 lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~g~~~~~~~~~lv~e~~~~gsL~~~-  143 (309)
                      +..|-.+.+|+...++..+++|..........-...+|..+++.+.... .+++++...    .++||||++|..+..- 
T Consensus         4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~~   79 (256)
T TIGR02721         4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLDQ   79 (256)
T ss_pred             CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccccc
Confidence            4567788999988778888888754432221113567889999885332 345554432    3689999998665421 


Q ss_pred             -------------hh-hhCCCCCCCCCCCHHHH-HHHHHHH---------HHHHHHhhc-----CCCCCeEeCCCCCCCe
Q 045682          144 -------------IR-IQHNPQPQHEPLLLTHR-LKIAKDI---------ANAIAYLHV-----GFPRPVIFRDFKLSNI  194 (309)
Q Consensus       144 -------------l~-~~~~~~~~~~~l~~~~~-~~i~~~i---------a~~l~yLH~-----~~~~~iiH~dlkp~Ni  194 (309)
                                   |. .|..+ ....+++.... ..+..++         ...+..+-.     .....++|+|+.|.||
T Consensus        80 ~~~~~~~~~la~~l~~lH~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni  158 (256)
T TIGR02721        80 FVALDLLLELAALLHQLHSQP-RFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL  158 (256)
T ss_pred             ccCchhHHHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence                         11 12211 11122222211 1111111         111111110     1134689999999999


Q ss_pred             eecCCCcEEEeecccccc
Q 045682          195 LFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~  212 (309)
                      +++.++ +.++||+.|..
T Consensus       159 l~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       159 VVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             EEeCCC-CEEEeccccCc
Confidence            999877 78999998764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK10593 hypothetical protein; Provisional

Probab=98.19  E-value=5.1e-05  Score=66.37  Aligned_cols=77  Identities=9%  Similarity=0.025  Sum_probs=57.2

Q ss_pred             ccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-C--Ccceeeeeeeee---CCceEEEEEec
Q 045682           62 SEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI-H--RCFFKLIGCCLE---TQIPILVFEYI  135 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~g~~~~---~~~~~lv~e~~  135 (309)
                      ...-||+|..+.||.....+..+.+|..+..  .....+..|...|+.+. +  -.++++++++..   .+..++|||++
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i   95 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQGNPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL   95 (297)
T ss_pred             eeeecCCccceeEEEEEcCCCCEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence            3456999999999998874445666764331  12357889999999984 3  468899988754   36789999999


Q ss_pred             cCCCh
Q 045682          136 NCGSL  140 (309)
Q Consensus       136 ~~gsL  140 (309)
                      +++++
T Consensus        96 ~G~~~  100 (297)
T PRK10593         96 RGVSV  100 (297)
T ss_pred             CCEec
Confidence            98765

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.15  E-value=9.9e-05  Score=66.74  Aligned_cols=73  Identities=10%  Similarity=-0.014  Sum_probs=52.8

Q ss_pred             CceeecCCeEEEEEEe-CC-eEEEEEEecCC------C-chhHHHHHHHHHHHhhc-c--CCcceeeeeeeeeCCceEEE
Q 045682           64 KVIMKRSFYTLYKGFC-QE-RLISVMKFDAS------K-PRMYDCCINNIVYASQM-I--HRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~~-~~vavK~~~~~------~-~~~~~~~~~e~~~l~~l-~--h~niv~l~g~~~~~~~~~lv  131 (309)
                      +.||.|.+..||++.. +| +.|+||.-...      . +...+++..|.+.|..+ .  ..++++++.+-  ....++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCEEE
Confidence            4689999999999999 55 48999985321      1 12346677888888887 2  34677887763  3457899


Q ss_pred             EEeccCC
Q 045682          132 FEYINCG  138 (309)
Q Consensus       132 ~e~~~~g  138 (309)
                      |||+++.
T Consensus       110 ME~L~~~  116 (401)
T PRK09550        110 MEDLSDH  116 (401)
T ss_pred             EecCCCc
Confidence            9999864

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.15  E-value=3.2e-05  Score=65.24  Aligned_cols=73  Identities=8%  Similarity=0.007  Sum_probs=45.6

Q ss_pred             CceeecCCe-EEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC---cceeeeeeeeeC---CceEEEEEecc
Q 045682           64 KVIMKRSFY-TLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHR---CFFKLIGCCLET---QIPILVFEYIN  136 (309)
Q Consensus        64 ~~lg~G~~g-~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~g~~~~~---~~~~lv~e~~~  136 (309)
                      +.|+.|+.. .||+.   +..+++|.....  .....+.+|.+++..+...   .++++++.....   +..+++|++++
T Consensus         3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~   77 (235)
T cd05155           3 EPVDSGGTDNATFRL---GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE   77 (235)
T ss_pred             eeccCCCcccceEEc---CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence            346766665 58875   235667764432  2345788999999888422   345555544332   23588999999


Q ss_pred             CCChh
Q 045682          137 CGSLA  141 (309)
Q Consensus       137 ~gsL~  141 (309)
                      |.++.
T Consensus        78 G~~l~   82 (235)
T cd05155          78 GETAT   82 (235)
T ss_pred             CCCCC
Confidence            87664

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=98.11  E-value=4.7e-05  Score=66.52  Aligned_cols=147  Identities=16%  Similarity=0.153  Sum_probs=86.9

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC--cceeeeee------eeeCCceEEEEEe
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHR--CFFKLIGC------CLETQIPILVFEY  134 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~g~------~~~~~~~~lv~e~  134 (309)
                      .+.|..|....+|+...++..+++|.....   .......|+.++..+.+.  .+++++..      ....+..++|++|
T Consensus        19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~   95 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSGRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF   95 (296)
T ss_pred             eecccCccccceEEEEeCCCcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence            445777777889998776668888887642   234566788888887433  24455432      1234567899999


Q ss_pred             ccCCChhh-----------hhh-hhCC--CC----CCCCCCCHHHHH----------HHHHHHHHHHHHhhc----CCCC
Q 045682          135 INCGSLAD-----------RIR-IQHN--PQ----PQHEPLLLTHRL----------KIAKDIANAIAYLHV----GFPR  182 (309)
Q Consensus       135 ~~~gsL~~-----------~l~-~~~~--~~----~~~~~l~~~~~~----------~i~~~ia~~l~yLH~----~~~~  182 (309)
                      ++|.++..           .|. .|..  ..    .......|....          .....+..++.++..    ....
T Consensus        96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~  175 (296)
T cd05153          96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR  175 (296)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence            99876532           111 1110  00    011111222111          011123334444442    1135


Q ss_pred             CeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          183 PVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       183 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      .++|+|+.|.||+++.++.+.|+||+.+..
T Consensus       176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         176 GVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             cCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            799999999999999888789999987753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.06  E-value=7.5e-05  Score=60.70  Aligned_cols=125  Identities=21%  Similarity=0.216  Sum_probs=90.0

Q ss_pred             cCCCccCceeecCC-eEEEEEEeCCeEEEEEEecC---CCc------------------hhHHHHHHHHHHHhhc---cC
Q 045682           58 NNYDSEKVIMKRSF-YTLYKGFCQERLISVMKFDA---SKP------------------RMYDCCINNIVYASQM---IH  112 (309)
Q Consensus        58 ~~~~~~~~lg~G~~-g~V~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~e~~~l~~l---~h  112 (309)
                      .+++..+.||.|.- |.||++..+|..+|+|.+..   ..+                  .....|..|.+...+|   .+
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            77888999999999 99999999999999999322   100                  1223577888887777   35


Q ss_pred             Ccc--eeeeeeeeeC------------------CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHH
Q 045682          113 RCF--FKLIGCCLET------------------QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANA  172 (309)
Q Consensus       113 ~ni--v~l~g~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~  172 (309)
                      .++  |+.+|+..=.                  ....||.||.+...                .+.    .+-+.+|.+-
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------------~~~----~~~~~~~~~d  176 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------------PLQ----IRDIPQMLRD  176 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------------ccc----hhHHHHHHHH
Confidence            455  8999987321                  12345666655422                112    3456777888


Q ss_pred             HHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       173 l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |..+|   ..+|+-+|+++.|..     .-||+|||.+
T Consensus       177 l~~~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  177 LKILH---KLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHH---HCCeeeccCcccccc-----CCEEEecccC
Confidence            89999   999999999999975     3489999854

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.99  E-value=0.00017  Score=60.75  Aligned_cols=144  Identities=17%  Similarity=0.158  Sum_probs=81.9

Q ss_pred             CceeecCCeEEEEEEeC---CeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           64 KVIMKRSFYTLYKGFCQ---ERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      +.|..|-...+|+....   +..+++|........ .-...+|+.++..+. +.-.+++++...    -.++|||++|.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            35677888899998874   578888876543221 122347888888884 444456655432    248999999876


Q ss_pred             hhhh--------------hh-hhCCCCCCC------CCC-CHHHHHHHH-------------------------HHHHHH
Q 045682          140 LADR--------------IR-IQHNPQPQH------EPL-LLTHRLKIA-------------------------KDIANA  172 (309)
Q Consensus       140 L~~~--------------l~-~~~~~~~~~------~~l-~~~~~~~i~-------------------------~~ia~~  172 (309)
                      +...              |. .|.......      ... .+..+..+.                         .+.+..
T Consensus        79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  158 (235)
T cd05157          79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW  158 (235)
T ss_pred             CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence            5321              11 122111110      111 122211111                         111111


Q ss_pred             HH-Hhhc-CCCCCeEeCCCCCCCeeecC-CCcEEEeecccccc
Q 045682          173 IA-YLHV-GFPRPVIFRDFKLSNILFNE-ENVAKLFDFSFSIS  212 (309)
Q Consensus       173 l~-yLH~-~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~  212 (309)
                      +. .+-. .....++|+|+.+.|||++. ++.+.++||.+|..
T Consensus       159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            11 1111 01457999999999999997 57899999988753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK05231 homoserine kinase; Provisional

Probab=97.94  E-value=0.00052  Score=60.66  Aligned_cols=146  Identities=14%  Similarity=0.142  Sum_probs=78.6

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC--cceeeeee------eeeCCceEEEEEec
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHR--CFFKLIGC------CLETQIPILVFEYI  135 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~g~------~~~~~~~~lv~e~~  135 (309)
                      +.|+.|....+|....++..+++|+.....   ......|+.++..|...  .+++++..      ....+..+++++|+
T Consensus        28 ~~l~~G~~n~~y~v~t~~g~~vLK~~~~~~---~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l  104 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQGEYVLTLFERLT---AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL  104 (319)
T ss_pred             chhccccccceEEEEeCCCcEEEEEeccCC---hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence            346667777899988755578889876222   23344455556555222  23343321      12355678999999


Q ss_pred             cCCChh-----------hhhhh-hCC--CC----CCCCCCCH-HHHHH------------HH-HHHHHHHHHhhc----C
Q 045682          136 NCGSLA-----------DRIRI-QHN--PQ----PQHEPLLL-THRLK------------IA-KDIANAIAYLHV----G  179 (309)
Q Consensus       136 ~~gsL~-----------~~l~~-~~~--~~----~~~~~l~~-~~~~~------------i~-~~ia~~l~yLH~----~  179 (309)
                      +|..+.           +.|.. |..  +.    .....+.| .....            .+ ..+...+..+..    .
T Consensus       105 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  184 (319)
T PRK05231        105 EGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPA  184 (319)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccccc
Confidence            986442           22211 110  00    00111212 11111            11 111112233321    0


Q ss_pred             CCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          180 FPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       180 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      -..++||+|+.|.||+++.+...-|+||+.+..
T Consensus       185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             CCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            246899999999999999776668999997753

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.91  E-value=0.00039  Score=61.17  Aligned_cols=147  Identities=16%  Similarity=0.173  Sum_probs=83.6

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC--cceeeeeee------eeCCceEEEEEe
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHR--CFFKLIGCC------LETQIPILVFEY  134 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~g~~------~~~~~~~lv~e~  134 (309)
                      ...++.|....+|+...++..+++|......  .......|+.++..|...  .+++++...      ...+..+++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~  104 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVGRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF  104 (307)
T ss_pred             ccccCCccccceEEEEeCCCcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence            3456677667899887755567888765432  123455677777777322  244544321      124567899999


Q ss_pred             ccCCChhh-----------hhh-hhC--CCCCCC-----CCCCHHHHH------------HHHHHHHHHHHHhhc----C
Q 045682          135 INCGSLAD-----------RIR-IQH--NPQPQH-----EPLLLTHRL------------KIAKDIANAIAYLHV----G  179 (309)
Q Consensus       135 ~~~gsL~~-----------~l~-~~~--~~~~~~-----~~l~~~~~~------------~i~~~ia~~l~yLH~----~  179 (309)
                      ++|..+..           .+. .|.  .+....     ..-.|....            .....+...++++..    .
T Consensus       105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~  184 (307)
T TIGR00938       105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD  184 (307)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence            98855421           111 111  000000     011121110            111223345555531    1


Q ss_pred             CCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          180 FPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       180 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      ...+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus       185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            25789999999999999988878999999774

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.82  E-value=0.0015  Score=58.46  Aligned_cols=139  Identities=11%  Similarity=0.031  Sum_probs=87.3

Q ss_pred             CccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeee------eeCCc-eEEEE
Q 045682           61 DSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCC------LETQI-PILVF  132 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~------~~~~~-~~lv~  132 (309)
                      ..+.-||+|+-+.+|..-.-+.. +.|+..........+.   ...|... .||-+..-+.+-      .+++. .-++|
T Consensus        14 ~~gr~LgqGgea~ly~l~e~~d~-VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm   89 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEVRDQ-VAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM   89 (637)
T ss_pred             CCCccccCCccceeeecchhhch-hheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence            44667999999999975432222 3354444433332222   2234444 677554312111      11222 55677


Q ss_pred             EeccCC-ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          133 EYINCG-SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       133 e~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      ..+++. .+..++. -..........+|...++.+..+|.+-+-||   ..+.+-+|+.++|+|+++++.|.|.|-
T Consensus        90 P~v~g~~pI~~~y~-p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVds  161 (637)
T COG4248          90 PKVSGKEPIHMIYS-PATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDS  161 (637)
T ss_pred             ccCCCccchhhhcC-chhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcc
Confidence            777653 3333332 1111223445789999999999999999999   899999999999999999998888874

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.69  E-value=0.00011  Score=63.60  Aligned_cols=130  Identities=12%  Similarity=0.024  Sum_probs=91.0

Q ss_pred             CCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCC--------------------chh--HHHHHHHHHHHhhc-cCC-
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASK--------------------PRM--YDCCINNIVYASQM-IHR-  113 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--------------------~~~--~~~~~~e~~~l~~l-~h~-  113 (309)
                      -++.++.||-|.-+.||.+.+ .|++.++|.-....                    ...  .-...+|+..|+.| .|. 
T Consensus        93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            467789999999999999999 78888888532110                    000  11245788888888 333 


Q ss_pred             cceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       114 niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      -|++.++++    .-++|||++.+..|.+.-          ...+.+++..-+..+   +--|.   ..++||+|..-=|
T Consensus       173 pVPkpiD~~----RH~Vvmelv~g~Pl~~v~----------~v~d~~~ly~~lm~~---Iv~la---~~GlIHgDFNEFN  232 (465)
T KOG2268|consen  173 PVPKPIDHN----RHCVVMELVDGYPLRQVR----------HVEDPPTLYDDLMGL---IVRLA---NHGLIHGDFNEFN  232 (465)
T ss_pred             CCCCccccc----ceeeHHHhhcccceeeee----------ecCChHHHHHHHHHH---HHHHH---HcCceecccchhe
Confidence            345555543    457899999998888762          223344444333333   33444   7899999999999


Q ss_pred             eeecCCCcEEEeecc
Q 045682          194 ILFNEENVAKLFDFS  208 (309)
Q Consensus       194 ill~~~~~~kl~Dfg  208 (309)
                      |++++++.++++||-
T Consensus       233 imv~dd~~i~vIDFP  247 (465)
T KOG2268|consen  233 IMVKDDDKIVVIDFP  247 (465)
T ss_pred             eEEecCCCEEEeech
Confidence            999999999999996

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.68  E-value=0.001  Score=60.10  Aligned_cols=80  Identities=5%  Similarity=-0.082  Sum_probs=54.3

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCCC----c---hhHHHHHHHHHHHhhcc---CCcceeeeeeeeeCCceEEEE
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDASK----P---RMYDCCINNIVYASQMI---HRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----~---~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .+.||.|....||+....+..++||+-....    .   ....+-..|+..|..+.   ..++++++.++.+  ..+++|
T Consensus        37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vlvM  114 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALIGM  114 (418)
T ss_pred             EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEEEE
Confidence            4468999999999988766779999865211    1   13344445577776653   3588899988874  357889


Q ss_pred             EeccC--CChhhhh
Q 045682          133 EYINC--GSLADRI  144 (309)
Q Consensus       133 e~~~~--gsL~~~l  144 (309)
                      ||+++  ..+.+-+
T Consensus       115 E~L~~~~~ilr~~L  128 (418)
T PLN02756        115 RYLEPPHIILRKGL  128 (418)
T ss_pred             eecCCcceehhhhh
Confidence            99976  3455544

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.66  E-value=0.001  Score=58.31  Aligned_cols=143  Identities=18%  Similarity=0.172  Sum_probs=83.9

Q ss_pred             ceeecCCeEEEEEEeC--------CeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEEEec
Q 045682           65 VIMKRSFYTLYKGFCQ--------ERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .|..|-...+|+....        +..+++|...... .......+|..++..+. +.-.+++++++..    .+|+||+
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i   79 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFI   79 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhee
Confidence            4556777789998873        4788888865543 22234568888888884 3334466665542    3689999


Q ss_pred             cCCChhhh--------------hh-hhCCCCCC------CCCCCHHHHHH--------------------------HHHH
Q 045682          136 NCGSLADR--------------IR-IQHNPQPQ------HEPLLLTHRLK--------------------------IAKD  168 (309)
Q Consensus       136 ~~gsL~~~--------------l~-~~~~~~~~------~~~l~~~~~~~--------------------------i~~~  168 (309)
                      +|.++...              |. .|......      ..+.-|.....                          +...
T Consensus        80 ~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (302)
T cd05156          80 PSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLED  159 (302)
T ss_pred             CCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHH
Confidence            88766431              11 12211110      01111111111                          1122


Q ss_pred             HHHHHHHhhc------CCCCCeEeCCCCCCCeeecCC----CcEEEeecccccc
Q 045682          169 IANAIAYLHV------GFPRPVIFRDFKLSNILFNEE----NVAKLFDFSFSIS  212 (309)
Q Consensus       169 ia~~l~yLH~------~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~~  212 (309)
                      +..-+.++-.      .....++|+|+.|.||+++.+    +.+.++||.+|..
T Consensus       160 ~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         160 EAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            2233334431      125679999999999999975    8899999998864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PLN02236 choline kinase

Probab=97.54  E-value=0.0024  Score=57.08  Aligned_cols=144  Identities=16%  Similarity=0.172  Sum_probs=83.5

Q ss_pred             ceeecCCeEEEEEEe-C-----CeEEEEEEecCCCchhHHHHHHHHHHHhhccCCc-ceeeeeeeeeCCceEEEEEeccC
Q 045682           65 VIMKRSFYTLYKGFC-Q-----ERLISVMKFDASKPRMYDCCINNIVYASQMIHRC-FFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~-~-----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      .|-.|-...+|+..+ .     +..|++|..........++ .+|..++..+...+ -+++++.+.. +   .|+||+++
T Consensus        43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR-~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~efi~g  117 (344)
T PLN02236         43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDR-DDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEFIHA  117 (344)
T ss_pred             EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeech-HHHHHHHHHHHHcCCCCceEEEECC-c---eEEEeeCC
Confidence            455577889999876 2     2578888776544333232 67899998884433 3466666533 2   58999987


Q ss_pred             CChhhh--------------hh-hhCCCCCCC-CCCCHHHHHHHHHHH-----------------HHHHHHh----hc-C
Q 045682          138 GSLADR--------------IR-IQHNPQPQH-EPLLLTHRLKIAKDI-----------------ANAIAYL----HV-G  179 (309)
Q Consensus       138 gsL~~~--------------l~-~~~~~~~~~-~~l~~~~~~~i~~~i-----------------a~~l~yL----H~-~  179 (309)
                      .++..-              |. .|..+.... ....+.....+..++                 ...+..|    .. .
T Consensus       118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~  197 (344)
T PLN02236        118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD  197 (344)
T ss_pred             CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence            666421              11 122111111 122233333332211                 1111111    11 1


Q ss_pred             CCCCeEeCCCCCCCeeecC-CCcEEEeeccccccc
Q 045682          180 FPRPVIFRDFKLSNILFNE-ENVAKLFDFSFSISI  213 (309)
Q Consensus       180 ~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~  213 (309)
                      ....++|+|+++.||++++ ++.+.++||.++...
T Consensus       198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~  232 (344)
T PLN02236        198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN  232 (344)
T ss_pred             CCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence            2457899999999999976 578999999988643

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.47  E-value=0.0036  Score=54.83  Aligned_cols=142  Identities=9%  Similarity=0.092  Sum_probs=79.2

Q ss_pred             EEEEEEeCCeEEEEEEecC--CCchhHHHHHHHHHHHhhcc--CCcceeeeeeeeeCC--ceEEEEEeccCCChhhh---
Q 045682           73 TLYKGFCQERLISVMKFDA--SKPRMYDCCINNIVYASQMI--HRCFFKLIGCCLETQ--IPILVFEYINCGSLADR---  143 (309)
Q Consensus        73 ~V~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~~--~~~lv~e~~~~gsL~~~---  143 (309)
                      .+|....+++.+++. ...  ..........+|+.+++.+.  -.-+...+++|.++.  .++.||+|+.|..+.+.   
T Consensus        40 ~t~~~~~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~  118 (321)
T COG3173          40 DTFRLGDTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPP  118 (321)
T ss_pred             ceEEEecCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCc
Confidence            455555567777777 221  12233345567777777773  334567788888766  88999999988433222   


Q ss_pred             ---------------hhh-hCCCCC-----------CCCCC-CHHHHHHH--------HHHHHHHHHHhhcC-----CCC
Q 045682          144 ---------------IRI-QHNPQP-----------QHEPL-LLTHRLKI--------AKDIANAIAYLHVG-----FPR  182 (309)
Q Consensus       144 ---------------l~~-~~~~~~-----------~~~~l-~~~~~~~i--------~~~ia~~l~yLH~~-----~~~  182 (309)
                                     |.. |.-+..           ...++ .|...++.        .-....-..||+..     ...
T Consensus       119 ~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~  198 (321)
T COG3173         119 ESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPP  198 (321)
T ss_pred             ccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCc
Confidence                           111 110000           00000 11111100        00111122333310     144


Q ss_pred             CeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          183 PVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       183 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      .++|+|+.+.|++++.++-+=+.||+++....+
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP  231 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP  231 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence            699999999999999888899999998876544

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.46  E-value=0.0027  Score=54.92  Aligned_cols=33  Identities=18%  Similarity=0.268  Sum_probs=26.7

Q ss_pred             CCCeEeCCCCCCCeeecCCCc-EEEeeccccccc
Q 045682          181 PRPVIFRDFKLSNILFNEENV-AKLFDFSFSISI  213 (309)
Q Consensus       181 ~~~iiH~dlkp~Nill~~~~~-~kl~Dfg~a~~~  213 (309)
                      ...++|+|+.|.||+++.++. .-|.||+.+...
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            345899999999999997555 569999987643

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.45  E-value=0.0017  Score=57.78  Aligned_cols=143  Identities=20%  Similarity=0.222  Sum_probs=80.9

Q ss_pred             ceeecCCeEEEEEEeCC-----eEEEEEEecCCCchhHHHHHHHHHHHhhccCCcc-eeeeeeeeeCCceEEEEEeccCC
Q 045682           65 VIMKRSFYTLYKGFCQE-----RLISVMKFDASKPRMYDCCINNIVYASQMIHRCF-FKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~~~-----~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      .|..|-...+|+....+     ..|.++.......... .-.+|..++..+..-++ +++++++. .+   +|.+|+++.
T Consensus        21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~I-dR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g~   95 (330)
T PLN02421         21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVI-DRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINAR   95 (330)
T ss_pred             EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEe-chHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcCC
Confidence            45557778899987633     3788887765432221 23578888888854444 46666653 33   589999776


Q ss_pred             Chhh-------hh-------h-hhCCCCCCC-CCCCHHHHHHHHHHH----------------------HHHH----HHh
Q 045682          139 SLAD-------RI-------R-IQHNPQPQH-EPLLLTHRLKIAKDI----------------------ANAI----AYL  176 (309)
Q Consensus       139 sL~~-------~l-------~-~~~~~~~~~-~~l~~~~~~~i~~~i----------------------a~~l----~yL  176 (309)
                      +|..       .+       . .|..+.... .+-.|..+..+..++                      ..-+    .++
T Consensus        96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~  175 (330)
T PLN02421         96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT  175 (330)
T ss_pred             CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence            5532       11       1 122211111 112233332222221                      1111    122


Q ss_pred             hc-CCCCCeEeCCCCCCCeeecC-CCcEEEeecccccc
Q 045682          177 HV-GFPRPVIFRDFKLSNILFNE-ENVAKLFDFSFSIS  212 (309)
Q Consensus       177 H~-~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~  212 (309)
                      .. ..+.-.+|.|+.+.|||+++ ++.++++||.+|..
T Consensus       176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            11 11335899999999999974 57899999998854

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.37  E-value=0.0035  Score=55.79  Aligned_cols=78  Identities=10%  Similarity=0.043  Sum_probs=49.5

Q ss_pred             ceeecCCeEEEEEEeC-C-eEEEEEEecCC------C-chhHHHHHHHHHHHhhcc--CC-cceeeeeeeeeCCceEEEE
Q 045682           65 VIMKRSFYTLYKGFCQ-E-RLISVMKFDAS------K-PRMYDCCINNIVYASQMI--HR-CFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~~-~-~~vavK~~~~~------~-~~~~~~~~~e~~~l~~l~--h~-niv~l~g~~~~~~~~~lv~  132 (309)
                      .||.|....||++... + +.|+||.-...      + +...++..-|...|....  -| .+++++.  .++....+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence            4799999999999983 3 68999975321      1 233355566777776652  33 4555554  3444556899


Q ss_pred             EeccCC-Chhhhh
Q 045682          133 EYINCG-SLADRI  144 (309)
Q Consensus       133 e~~~~g-sL~~~l  144 (309)
                      |+++.. .|.+.|
T Consensus        80 EdL~~~~ilR~~L   92 (370)
T TIGR01767        80 EDLSHHKIARKGL   92 (370)
T ss_pred             hhCccchHHHHHH
Confidence            998543 444444

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.34  E-value=0.0021  Score=55.73  Aligned_cols=74  Identities=12%  Similarity=-0.026  Sum_probs=49.0

Q ss_pred             ccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc---cCCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           62 SEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM---IHRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      ....++.|.-..+|+...++..+.||.-..   .....|..|+.-|+.|   .--.+++++++....+..+||+||++.+
T Consensus        21 ~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   21 SIEPVSGGDINEAYRLDTDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EEEEE--SSSSEEEEEETTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             eeEecCCCChhheEEEECCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            345688888999999887889999998662   2335678888888888   3446778998887777789999999765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.33  E-value=0.00021  Score=69.62  Aligned_cols=116  Identities=11%  Similarity=0.092  Sum_probs=72.2

Q ss_pred             EeCCCCCC-CeeecCCCcEEEeecccccccCCCc------cccccccccccccccC------CCcccHHHHHHHHhhccc
Q 045682          185 IFRDFKLS-NILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDR  251 (309)
Q Consensus       185 iH~dlkp~-Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  251 (309)
                      .+++..|. |++++.++.+++.|||.++....+.      ...|...|.+++...+      .+.|+++..+++++.+..
T Consensus       499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~  578 (669)
T cd05610         499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIP  578 (669)
T ss_pred             CCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            34555555 6777777788999999887654322      3456667776665432      245556656666554332


Q ss_pred             ------ccccccccccCCCCCCc-hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          252 ------LNEIIDPLIMGDRSCSG-KEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       252 ------~~~~~~~~~~g~~~~~~-~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                            ..+++..++.+..+++. ....+..+.+++..||..+|.+|||+.++++.
T Consensus       579 pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         579 PFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             CCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence                  22333333333332221 12345678899999999999999999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.31  E-value=0.0042  Score=55.02  Aligned_cols=136  Identities=13%  Similarity=0.139  Sum_probs=92.1

Q ss_pred             cCceeecCCeEEEEEEe-CCeEEEEEEecCCC-------------------------chhHHH-HHHHHHHHhhccCCcc
Q 045682           63 EKVIMKRSFYTLYKGFC-QERLISVMKFDASK-------------------------PRMYDC-CINNIVYASQMIHRCF  115 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-------------------------~~~~~~-~~~e~~~l~~l~h~ni  115 (309)
                      ..-|..|.-+.||.|+- +|..+|||+.+.+-                         ....+. ...|+.-|.+++...|
T Consensus       149 nGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI  228 (520)
T KOG2270|consen  149 NGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI  228 (520)
T ss_pred             ccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            44578899999999998 89999999764421                         011111 2356666666655544


Q ss_pred             eeeeeeeeeCCceEEEEEeccCC-ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          116 FKLIGCCLETQIPILVFEYINCG-SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       116 v~l~g~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                      +..--+...  .-.|||+|+..- =..-.|        ....++...+..+-.+++.-|.-|.+  ..++||.||+--|+
T Consensus       229 P~PePIlLk--~hVLVM~FlGrdgw~aPkL--------Kd~~ls~~ka~~~Y~~~v~~MR~lY~--~c~LVHADLSEfN~  296 (520)
T KOG2270|consen  229 PCPEPILLK--NHVLVMEFLGRDGWAAPKL--------KDASLSTSKARELYQQCVRIMRRLYQ--KCRLVHADLSEFNL  296 (520)
T ss_pred             CCCCceeee--cceEeeeeccCCCCcCccc--------ccccCChHHHHHHHHHHHHHHHHHHH--Hhceeccchhhhhh
Confidence            432222222  236899999632 112222        34567777788888899999988886  67999999999999


Q ss_pred             eecCCCcEEEeeccccc
Q 045682          195 LFNEENVAKLFDFSFSI  211 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~  211 (309)
                      |+. +|.+.|+|.+-+.
T Consensus       297 Lyh-dG~lyiIDVSQSV  312 (520)
T KOG2270|consen  297 LYH-DGKLYIIDVSQSV  312 (520)
T ss_pred             eEE-CCEEEEEEccccc
Confidence            885 6889999998654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.28  E-value=0.00037  Score=65.67  Aligned_cols=47  Identities=26%  Similarity=0.439  Sum_probs=41.4

Q ss_pred             HHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       167 ~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      .+++.|+.|+|.  +.++||++|.|++|.++.++..||+.|+++.....
T Consensus       106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~  152 (700)
T KOG2137|consen  106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANG  152 (700)
T ss_pred             hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCC
Confidence            345599999997  88999999999999999999999999998766544

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.09  E-value=0.019  Score=50.39  Aligned_cols=30  Identities=27%  Similarity=0.522  Sum_probs=26.0

Q ss_pred             CCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          181 PRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       181 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      ..+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            468999999999999987 678999999654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.05  E-value=0.0048  Score=55.64  Aligned_cols=80  Identities=9%  Similarity=-0.057  Sum_probs=52.0

Q ss_pred             cCceeecCCeEEEEEEeC--CeEEEEEEecCC-----C-chhHHHHHHHHHHHhhcc--CC-cceeeeeeeeeCCceEEE
Q 045682           63 EKVIMKRSFYTLYKGFCQ--ERLISVMKFDAS-----K-PRMYDCCINNIVYASQMI--HR-CFFKLIGCCLETQIPILV  131 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~-~~~~~~~~~e~~~l~~l~--h~-niv~l~g~~~~~~~~~lv  131 (309)
                      ...||.|.-..||++...  +..|+||.-...     + +-..++..-|...|+...  .| .+++++.+  ++....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            346899999999999983  678999974321     1 234466677888888762  33 45666643  34445688


Q ss_pred             EEeccCC-Chhhhh
Q 045682          132 FEYINCG-SLADRI  144 (309)
Q Consensus       132 ~e~~~~g-sL~~~l  144 (309)
                      ||+++.. .|.+.|
T Consensus       112 MEdL~~~~ilR~~L  125 (409)
T PRK12396        112 MEDLSDHTILRTAL  125 (409)
T ss_pred             HHhCcccHHHHHHH
Confidence            9988542 344444

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.01  E-value=0.00014  Score=68.03  Aligned_cols=140  Identities=16%  Similarity=0.056  Sum_probs=96.2

Q ss_pred             cCCCccCceeecCCeEEEEEEeC-CeEEEEEEecCCCchhHHHHHHHHHHHhhccCCc-ceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQ-ERLISVMKFDASKPRMYDCCINNIVYASQMIHRC-FFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ..+...+.+++|+++.++|.+.+ .+....+.+...     ....-++++|.+++||| .+..++-+..+...++.++++
T Consensus       242 kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~  316 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRIC  316 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhh
Confidence            33444455789999999999873 333334443322     34556889999999999 777777777788889999999


Q ss_pred             cCC-ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          136 NCG-SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       136 ~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      .++ +...-..      .....+...+...+...-+++++|+|   +-.-+|+|    ||+..+ +..|..||+.+...+
T Consensus       317 s~~rs~~~~~~------~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~  382 (829)
T KOG0576|consen  317 STGRSSALEMT------VSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLT  382 (829)
T ss_pred             cCCccccccCC------hhhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccC
Confidence            877 3332211      11222333444566777788999999   66678998    777654 788999999877665


Q ss_pred             CC
Q 045682          215 EG  216 (309)
Q Consensus       215 ~~  216 (309)
                      ..
T Consensus       383 ~~  384 (829)
T KOG0576|consen  383 RT  384 (829)
T ss_pred             cc
Confidence            54

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=97.01  E-value=0.003  Score=52.26  Aligned_cols=31  Identities=32%  Similarity=0.531  Sum_probs=22.2

Q ss_pred             CCCeEeCCCCCCCeee-cCCCcEEEeeccccc
Q 045682          181 PRPVIFRDFKLSNILF-NEENVAKLFDFSFSI  211 (309)
Q Consensus       181 ~~~iiH~dlkp~Nill-~~~~~~kl~Dfg~a~  211 (309)
                      ..-++|.|+.|.|||+ +.++.++++||.+|.
T Consensus       142 ~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  142 PLVFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             GEEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             CceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            4578999999999999 889999999999874

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.87  E-value=0.013  Score=51.58  Aligned_cols=33  Identities=15%  Similarity=0.273  Sum_probs=29.2

Q ss_pred             CCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          181 PRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       181 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      ..+++|+|+.++|+|++.++.+.++||..+...
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d  227 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASFA  227 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhcccC
Confidence            457999999999999999999999999877643

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.79  E-value=0.0032  Score=63.01  Aligned_cols=185  Identities=12%  Similarity=0.079  Sum_probs=110.5

Q ss_pred             HHHHHHHhhccCCcceeeeeeeeeCCc----eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 045682          101 INNIVYASQMIHRCFFKLIGCCLETQI----PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL  176 (309)
Q Consensus       101 ~~e~~~l~~l~h~niv~l~g~~~~~~~----~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yL  176 (309)
                      .-|...+..+.|+|++.++++-..+..    ..+..|++..-++...+.       .-..++....+.+..++..|+.|+
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q-------~v~~i~~~~~r~~~~~~~~GL~~~  302 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ-------SVGSIPLETLRILHQKLLEGLAYL  302 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh-------hccccCHHHHHHHHHHHhhhHHHH
Confidence            346667777899999999998876432    234457788878888876       567889999999999999999999


Q ss_pred             hcCCCCCeEeCCCCCC---CeeecCCCcEEEe--ecccccccCCCcccccccc--cc-cccccc-CCCcccHHHHHHHHh
Q 045682          177 HVGFPRPVIFRDFKLS---NILFNEENVAKLF--DFSFSISIPEGELLTGLRA--FD-LARLNE-DDGYVALRDHVKKYF  247 (309)
Q Consensus       177 H~~~~~~iiH~dlkp~---Nill~~~~~~kl~--Dfg~a~~~~~~~~~~g~~~--~~-~~~~~~-~~~~~~~~~~~~~~~  247 (309)
                      |   .....|.-+..+   +--++.++.+.++  ||+.+...+....-.....  .. +.+... ..........+|..-
T Consensus       303 h---~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg  379 (1351)
T KOG1035|consen  303 H---SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLG  379 (1351)
T ss_pred             H---HhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHH
Confidence            9   666666655555   4455667777777  9988776654331111000  00 001100 001111222333321


Q ss_pred             h-------cccccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045682          248 E-------EDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       248 ~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      .       +..... .......    ..+.....+..+....|+..++++|++..+++..
T Consensus       380 ll~~~~~~~~~i~~-~~~~~~~----~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~  434 (1351)
T KOG1035|consen  380 LLLLQLSQGEDISE-KSAVPVS----LLDVLSTSELLDALPKCLDEDSEERLSALELLTH  434 (1351)
T ss_pred             HHHhhhhhcCcccc-cccchhh----hhccccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence            1       000000 0000000    0111222267888999999999999999998754

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.73  E-value=0.013  Score=48.36  Aligned_cols=115  Identities=13%  Similarity=0.023  Sum_probs=72.4

Q ss_pred             cCCeEEEEEEeCCeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCChhhhhhhh
Q 045682           69 RSFYTLYKGFCQERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQ  147 (309)
Q Consensus        69 G~~g~V~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~  147 (309)
                      ++.++.-.+..+-.+..+|++...+-. ...-|.++..+++++.  .|+++.-=  ..-.+-++.|+|.-....      
T Consensus        73 ~gNsTl~~~kt~iG~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i~------  142 (308)
T PF07387_consen   73 NGNSTLLIGKTKIGPLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKIN------  142 (308)
T ss_pred             CCceEEEEeccccchhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCcccc------
Confidence            344444444443345667776554432 3456788888888764  35555511  233566888888542111      


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          148 HNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       148 ~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                                +.    .++.-=.++|.-.|.. ..+.+|+|..|+||+.|..|.+||.|-+
T Consensus       143 ----------~~----N~i~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  143 ----------FS----NFITAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             ----------hh----HHHHHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChh
Confidence                      11    1111113677778844 6789999999999999999999999976

The function of this family is unknown.

>PTZ00384 choline kinase; Provisional

Probab=96.54  E-value=0.033  Score=50.44  Aligned_cols=72  Identities=10%  Similarity=0.032  Sum_probs=43.7

Q ss_pred             ceeecCCeEEEEEEeCC---e-----EEEEEEecCCCchhHHHHHHHHHHHhhccCC-cceeeeeeeeeCCceEEEEEec
Q 045682           65 VIMKRSFYTLYKGFCQE---R-----LISVMKFDASKPRMYDCCINNIVYASQMIHR-CFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~~~---~-----~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .|..|-...+|++...+   .     .|.+........... .-.+|+.+++.+... --+++++.+..    ++|+||+
T Consensus        57 ~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~I-dR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~efI  131 (383)
T PTZ00384         57 KMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVI-DNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEWV  131 (383)
T ss_pred             EeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEe-ccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEEEe
Confidence            45568888999997622   1     244443222211111 224689999999544 44567766643    5999999


Q ss_pred             cCCChh
Q 045682          136 NCGSLA  141 (309)
Q Consensus       136 ~~gsL~  141 (309)
                      +|.+|.
T Consensus       132 eGr~l~  137 (383)
T PTZ00384        132 EGNTMG  137 (383)
T ss_pred             ccccCC
Confidence            987664

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.41  E-value=0.074  Score=47.11  Aligned_cols=143  Identities=13%  Similarity=0.110  Sum_probs=80.9

Q ss_pred             eeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcc------eeeeeee----eeCCceEEEEEec
Q 045682           66 IMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCF------FKLIGCC----LETQIPILVFEYI  135 (309)
Q Consensus        66 lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni------v~l~g~~----~~~~~~~lv~e~~  135 (309)
                      |.+ .-..+|+....+..+++|.....  ....++..|...+..+.-..|      ..+-|-.    ..+...+-+++|+
T Consensus        34 l~s-~eN~~f~~~~~~g~~iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l  110 (331)
T COG2334          34 LNS-EENSNFRVQTEDGRYILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYL  110 (331)
T ss_pred             ccc-ccCceEEEEecCCCeEEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEec
Confidence            444 34568888885555577876665  334567778888888732222      2222221    1223677899999


Q ss_pred             cCCChhh-hh-----------h---hhCCCC-----CCCCCCCHHH-------------HHHHHHHHHHHHHHhhc----
Q 045682          136 NCGSLAD-RI-----------R---IQHNPQ-----PQHEPLLLTH-------------RLKIAKDIANAIAYLHV----  178 (309)
Q Consensus       136 ~~gsL~~-~l-----------~---~~~~~~-----~~~~~l~~~~-------------~~~i~~~ia~~l~yLH~----  178 (309)
                      +|..+.. .-           .   ....+.     .......|..             ......++...+..+..    
T Consensus       111 ~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~  190 (331)
T COG2334         111 PGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPA  190 (331)
T ss_pred             CCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchh
Confidence            9988773 11           0   000011     1111223320             01233344444444442    


Q ss_pred             CC-CCC--eEeCCCCCCCeeecCCCc-EEEeeccccc
Q 045682          179 GF-PRP--VIFRDFKLSNILFNEENV-AKLFDFSFSI  211 (309)
Q Consensus       179 ~~-~~~--iiH~dlkp~Nill~~~~~-~kl~Dfg~a~  211 (309)
                      .- ..+  +||+|+.|.||+++.+.. +-+.||+-+.
T Consensus       191 ~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         191 HLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             hCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            11 223  999999999999998874 8999999764

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.25  E-value=0.24  Score=43.92  Aligned_cols=70  Identities=7%  Similarity=0.002  Sum_probs=42.5

Q ss_pred             cCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC--cceeee---e--eeeeCCceEEEEEeccCCC
Q 045682           69 RSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHR--CFFKLI---G--CCLETQIPILVFEYINCGS  139 (309)
Q Consensus        69 G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~---g--~~~~~~~~~lv~e~~~~gs  139 (309)
                      +.-..||+... ++..+++|...... ....++..|+..+..+...  .++...   |  +...++..+.++++++|..
T Consensus        36 s~eN~vy~v~~~~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~  113 (325)
T PRK11768         36 SYENRVYQFGDEDGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRA  113 (325)
T ss_pred             cccceEEEEecCCCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence            34457999887 56778888764332 2345677788888777322  122211   2  1222456788999998764

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.12  E-value=0.03  Score=49.72  Aligned_cols=57  Identities=23%  Similarity=0.227  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          156 PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       156 ~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ...+.+...|+.+.+.-+.-+..  ..+.=|||+.-.||||+ +|++-|+||-+++.-..
T Consensus       317 ~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfklsRl~~~  373 (488)
T COG5072         317 ADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFKLSRLSYS  373 (488)
T ss_pred             cccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEeeeeecccC
Confidence            45788999999999888888875  67899999999999999 99999999999985543

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.92  E-value=0.093  Score=43.68  Aligned_cols=75  Identities=12%  Similarity=0.030  Sum_probs=54.2

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccC---CcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIH---RCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      +.+..|---..|...+...++-||+-..   .....|..|+.-|..|.-   -+|.+++.+-.+.+..|+|+||++-|.+
T Consensus        22 ~~v~gG~inea~~v~dg~~~~FvK~n~~---~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          22 EEVSGGDINEAWRLRDGTDPFFVKCNQR---EQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             cccCCccccceeEeecCCcceEEEecch---hhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            3455455555666666778899997433   334568888888888743   4577888888888899999999998766


Q ss_pred             h
Q 045682          141 A  141 (309)
Q Consensus       141 ~  141 (309)
                      .
T Consensus        99 d   99 (286)
T COG3001          99 D   99 (286)
T ss_pred             C
Confidence            6

>PTZ00296 choline kinase; Provisional

Probab=95.88  E-value=0.15  Score=47.15  Aligned_cols=144  Identities=13%  Similarity=0.150  Sum_probs=79.7

Q ss_pred             CceeecCCeEEEEEEeC----------CeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcce-eeeeeeeeCCceEEEE
Q 045682           64 KVIMKRSFYTLYKGFCQ----------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF-KLIGCCLETQIPILVF  132 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~----------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~g~~~~~~~~~lv~  132 (309)
                      +.|..|-.-.+|+....          ++.|.++.......... .-..|..++..+...+|. ++++.+.    -..|.
T Consensus       111 ~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lI-dR~~E~~v~~~ls~~gi~P~l~~~f~----gg~I~  185 (442)
T PTZ00296        111 NQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELY-NPISEFEVYKTMSKYRIAPQLLNTFS----GGRIE  185 (442)
T ss_pred             EEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcccee-CHHHHHHHHHHHHHCCCCCceEEEeC----CCEEE
Confidence            34666777788988763          35677777655432222 234678888887544443 5665543    24689


Q ss_pred             EeccCCChhh--h-----h-------h-hhCCCCC-------CCCCCCHHHHHHHHHHHH--------------------
Q 045682          133 EYINCGSLAD--R-----I-------R-IQHNPQP-------QHEPLLLTHRLKIAKDIA--------------------  170 (309)
Q Consensus       133 e~~~~gsL~~--~-----l-------~-~~~~~~~-------~~~~l~~~~~~~i~~~ia--------------------  170 (309)
                      ||++|.+|..  +     +       . .|.....       ...+..|....++...+.                    
T Consensus       186 efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~~~~~f~~~p~~f~~i~~~~~~~~~~~~~~~~~~~~~~l~~e~~  265 (442)
T PTZ00296        186 EWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLSKYKNIEKYQRDIHKYIKESE  265 (442)
T ss_pred             EeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccccCchhccCCCcHHHHHHHHHHHHHhhccchHhHhhHHHHHHHHH
Confidence            9999864431  1     0       0 1221100       111112333322222211                    


Q ss_pred             HHHHHhh-------cCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          171 NAIAYLH-------VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       171 ~~l~yLH-------~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      .-..++.       ......++|.|+-+.|||.+.++ ++++||.+|..-
T Consensus       266 ~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL~~~~~-l~LIDfEYAg~n  314 (442)
T PTZ00296        266 KFIKFMKVYSKSDNLANDIVFCHNDLQENNIINTNKC-LRLIDFEYSGYN  314 (442)
T ss_pred             HHHHHHHhhcccccccCCeeEEeCCCCccceeecCCC-EEEEeecccccc
Confidence            1122331       11245689999999999886544 999999988643

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.62  E-value=0.12  Score=46.72  Aligned_cols=62  Identities=19%  Similarity=0.133  Sum_probs=44.2

Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                      ..|+-+|.+|.++..+++        ....++....+++.--++|+--+--  --+++|.|+.|.||++..+
T Consensus       320 ~vl~E~~~~Gl~v~~~v~--------~~~~pe~l~kkva~lg~~AllkMl~--vDNFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVK--------WKSQPEALVKKVAKLGVNALLKMLI--VDNFVHADLHPGNVLIRFN  381 (565)
T ss_pred             ceeeeeccccccHHhhhh--------cccChHHHHHHHHHHHHHHHHHHHH--hhcceecccCCCcEEEEec
Confidence            346667888889999985        3444555666677666666543332  5689999999999999543

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.02  E-value=0.02  Score=46.22  Aligned_cols=32  Identities=13%  Similarity=0.246  Sum_probs=27.1

Q ss_pred             CCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          181 PRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       181 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      ....+|+|+.|.|+++++++ ++++||+++...
T Consensus        76 ~~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~g  107 (188)
T PRK10271         76 RLAPLHMDVHAGNLVHSASG-LRLIDWEYAGDG  107 (188)
T ss_pred             CeeeecCCCCCccEEEECCC-EEEEeCCcccCC
Confidence            34679999999999998877 889999988643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	309
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-25
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-25
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		5e-10
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		5e-10
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-10
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		8e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-08
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-08
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		1e-07
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-06
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-06
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		5e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		5e-06
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		5e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		5e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		5e-06
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		6e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		6e-06
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		8e-06
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		8e-06
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		9e-06
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		1e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		1e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		1e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		1e-05
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-05
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		5e-05
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-05
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		7e-05
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		8e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		8e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		9e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		9e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-04
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-04
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-04
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-04
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-04
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-04
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-04
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-04
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		3e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-04
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-04
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		4e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-04
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		4e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		4e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		4e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		4e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		4e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		4e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		4e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		6e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		6e-04
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		7e-04
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		7e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		7e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 49/296 (16%)
Query: 48  FSAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIV- 105
           FS +EL++A++N+ ++ ++ +  F  +YKG      L++V +    + +  +      V 
Sbjct: 20  FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
             S  +HR   +L G C+     +LV+ Y+  GS+A  +R +   QP   PL    R +I
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKRQRI 136
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE--------NVAKLFDFS--------- 208
           A   A  +AYLH      +I RD K +NIL +EE         +AKL D+          
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 209 ----------------------FSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKY 246
                                 F   +   EL+TG RAFDLARL  DD  V L D VK  
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-VMLLDWVKGL 255
Query: 247 FEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK 302
            +E +L  ++D  + G+     K+++++    +   C   SP++RP M +V + L+
Sbjct: 256 LKEKKLEALVDVDLQGNY----KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 49/296 (16%)
Query: 48  FSAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIV- 105
           FS +EL++A++N+ ++ ++ +  F  +YKG      L++V +    + +  +      V 
Sbjct: 28  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
             S  +HR   +L G C+     +LV+ Y+  GS+A  +R +   QP   PL    R +I
Sbjct: 88  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKRQRI 144
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE--------NVAKLFDFS--------- 208
           A   A  +AYLH      +I RD K +NIL +EE         +AKL D+          
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 209 ----------------------FSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKY 246
                                 F   +   EL+TG RAFDLARL  DD  V L D VK  
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-VMLLDWVKGL 263
Query: 247 FEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK 302
            +E +L  ++D  + G+     K+++++    +   C   SP++RP M +V + L+
Sbjct: 264 LKEKKLEALVDVDLQGNY----KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 45  YCTFSAKELEIATNNYDSEKV------IMKRSFYTLYKGFCQERLISVMKF----DASKP 94
           + +FS  EL+  TNN+D   +      + +  F  +YKG+     ++V K     D +  
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 95  RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQ 153
            +       I   ++  H    +L+G   +     LV+ Y+  GSL DR+  +   P   
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 128
Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             PL    R KIA+  AN I +LH       I RD K +NIL +E   AK+ DF  +
Sbjct: 129 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 45  YCTFSAKELEIATNNYDSEKV------IMKRSFYTLYKGFCQERLISVMKF----DASKP 94
           + +FS  EL+  TNN+D   +      + +  F  +YKG+     ++V K     D +  
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 95  RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQ 153
            +       I   ++  H    +L+G   +     LV+ Y+  GSL DR+  +   P   
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 128
Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             PL    R KIA+  AN I +LH       I RD K +NIL +E   AK+ DF  +
Sbjct: 129 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 45  YCTFSAKELEIATNNYDSEKV------IMKRSFYTLYKGFCQERLISVMKF----DASKP 94
           + +FS  EL+  TNN+D   +      + +  F  +YKG+     ++V K     D +  
Sbjct: 6   FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 95  RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQ 153
            +       I   ++  H    +L+G   +     LV+ Y+  GSL DR+  +   P   
Sbjct: 66  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 122
Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             PL    R KIA+  AN I +LH       I RD K +NIL +E   AK+ DF  +
Sbjct: 123 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 45  YCTFSAKELEIATNNYDSEKVIM------KRSFYTLYKGFCQERLISVMKF----DASKP 94
           + +FS  EL+  TNN+D   + +      +  F  +YKG+     ++V K     D +  
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 95  RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQ 153
            +       I   ++  H    +L+G   +     LV+ Y   GSL DR+  +   P   
Sbjct: 63  ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP--- 119
Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             PL    R KIA+  AN I +LH       I RD K +NIL +E   AK+ DF  +
Sbjct: 120 --PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFCQERL-ISVMKFDASKPRMYDCCINNIVYASQM 110
           +LE ATNN+D + +I    F  +YKG  ++   +++ +      +  +     I   S  
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            H     LIG C E    IL+++Y+  G+L   +     P      +    RL+I    A
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS---MSWEQRLEICIGAA 149
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS---ISIPEGELLTGLRA--- 224
             + YLH    R +I RD K  NIL +E  V K+ DF  S     + +  L   ++    
Sbjct: 150 RGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 225 ------FDLARLNE-DDGY------------------------VALRDHVKKYFEEDRLN 253
                 F   RL E  D Y                        V L +   +     +L 
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 254 EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR 306
           +I+DP  + D+    + + L+ +     +C+  S  DRP+M DV  KL+   R
Sbjct: 267 QIVDP-NLADKI---RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFCQERL-ISVMKFDASKPRMYDCCINNIVYASQM 110
           +LE ATNN+D + +I    F  +YKG  ++   +++ +      +  +     I   S  
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            H     LIG C E    IL+++Y+  G+L   +     P      +    RL+I    A
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS---MSWEQRLEICIGAA 149
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS---ISIPEGELLTGLRA--- 224
             + YLH    R +I RD K  NIL +E  V K+ DF  S     + +  L   ++    
Sbjct: 150 RGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 225 ------FDLARLNE-DDGY------------------------VALRDHVKKYFEEDRLN 253
                 F   RL E  D Y                        V L +   +     +L 
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 254 EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR 306
           +I+DP  + D+    + + L+ +     +C+  S  DRP+M DV  KL+   R
Sbjct: 267 QIVDP-NLADKI---RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL--VFEYINCGSLA 141
           +  +K DA  P+        I     + H    K  GCC +     L  V EY+  GSL 
Sbjct: 65  VKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR 123
Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
           D +       P+H  + L   L  A+ I   +AYLH    +  I RD    N+L + + +
Sbjct: 124 DYL-------PRHS-IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRL 172
Query: 202 AKLFDFSFSISIPEG 216
            K+ DF  + ++PEG
Sbjct: 173 VKIGDFGLAKAVPEG 187

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 110 MIHRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           + H    K  GCC +   +   LV EY+  GSL D +       P+H  + L   L  A+
Sbjct: 73  LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHS-IGLAQLLLFAQ 124
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
            I   +AYLH    +  I R+    N+L + + + K+ DF  + ++PEG
Sbjct: 125 QICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 15  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E   +   + IA+
Sbjct: 75  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 127
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+N  K+ DF  +
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 3   SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E   +   + IA+
Sbjct: 63  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+N  K+ DF  +
Sbjct: 116 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L G CLE Q PI LVFE++  G L+D +R Q               L +  
Sbjct: 61  KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 113
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
           D+   +AYL       VI RD    N L  E  V K+ DF  +  + + +    TG +  
Sbjct: 114 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 170
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
                   F  +R +      +    + + F E ++       +E+++ +  G R    +
Sbjct: 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 230
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
                 Y  ++  C  E P DRP    + ++L ++  S
Sbjct: 231 LASTHVY-QIMNHCWRERPEDRPAFSRLLRQLAEIAES 267

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 110 MIHRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           + H    K  GCC +   +   LV EY+  GSL D +       P+H  + L   L  A+
Sbjct: 73  LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHS-IGLAQLLLFAQ 124
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
            I   +AYLH    +  I R+    N+L + + + K+ DF  + ++PEG
Sbjct: 125 QICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L G CLE Q PI LVFE++  G L+D +R Q               L +  
Sbjct: 58  KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 110
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
           D+   +AYL       VI RD    N L  E  V K+ DF  +  + + +    TG +  
Sbjct: 111 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 167
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
                   F  +R +      +    + + F E ++       +E+++ +  G R    +
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
                 Y  ++  C  E P DRP    + ++L ++  S
Sbjct: 228 LASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 264

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L G CLE Q PI LVFE++  G L+D +R Q               L +  
Sbjct: 56  KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 108
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
           D+   +AYL       VI RD    N L  E  V K+ DF  +  + + +    TG +  
Sbjct: 109 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 165
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
                   F  +R +      +    + + F E ++       +E+++ +  G R    +
Sbjct: 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 225
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
                 Y  ++  C  E P DRP    + ++L ++  S
Sbjct: 226 LASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 262

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           +A + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 15  AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G     Q+ I V ++    SL   +   H  + + E   +   + IA+
Sbjct: 75  RKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 127
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+N  K+ DF  +
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L G CLE Q PI LVFE++  G L+D +R Q               L +  
Sbjct: 58  KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 110
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
           D+   +AYL       VI RD    N L  E  V K+ DF  +  + + +    TG +  
Sbjct: 111 DVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 167
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
                   F  +R +      +    + + F E ++       +E+++ +  G R    +
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
                 Y  ++  C  E P DRP    + ++L  +  S
Sbjct: 228 LASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L G CLE Q PI LVFE++  G L+D +R Q               L +  
Sbjct: 78  KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 130
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
           D+   +AYL       VI RD    N L  E  V K+ DF  +  + + +    TG +  
Sbjct: 131 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 187
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
                   F  +R +      +    + + F E ++       +E+++ +  G R    +
Sbjct: 188 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 247
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
                 Y  ++  C  E P DRP    + ++L ++  S
Sbjct: 248 LASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 284

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 11/179 (6%)
Query: 40  GKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYD 98
           G  +  C    K+L +     D    +++R  +    G      +  +K D  S+P   D
Sbjct: 1   GSQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 60
Query: 99  CCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL 158
             I  +     + HR   +L G  L   +  +V E    GSL DR+R +H         L
Sbjct: 61  DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FL 113
Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           L    + A  +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +
Sbjct: 114 LGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 13/180 (7%)
Query: 40  GKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYD 98
           G  +  C    K+L +     D    +++R  +    G      +  +K D  S+P   D
Sbjct: 1   GSQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 60
Query: 99  CCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL 158
             I  +     + HR   +L G  L   +  +V E    GSL DR+R       +H+   
Sbjct: 61  DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-------KHQGHF 112
Query: 159 LTHRL-KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           L   L + A  +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +
Sbjct: 113 LLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46  CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
           C    K+L +     D    +++R  +    G      +  +K D  S+P   D  I  +
Sbjct: 13  CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 72
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
                + HR   +L G  L   +  +V E    GSL DR+R +H         LL    +
Sbjct: 73  NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 125
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            A  +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +
Sbjct: 126 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46  CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
           C    K+L +     D    +++R  +    G      +  +K D  S+P   D  I  +
Sbjct: 13  CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 72
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
                + HR   +L G  L   +  +V E    GSL DR+R +H         LL    +
Sbjct: 73  NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 125
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            A  +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +
Sbjct: 126 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46  CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
           C    K+L +     D    +++R  +    G      +  +K D  S+P   D  I  +
Sbjct: 3   CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 62
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
                + HR   +L G  L   +  +V E    GSL DR+R +H         LL    +
Sbjct: 63  NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 115
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            A  +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46  CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
           C    K+L +     D    +++R  +    G      +  +K D  S+P   D  I  +
Sbjct: 3   CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 62
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
                + HR   +L G  L   +  +V E    GSL DR+R +H         LL    +
Sbjct: 63  NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 115
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            A  +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +
Sbjct: 116 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46  CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
           C    K+L +     D    +++R  +    G      +  +K D  S+P   D  I  +
Sbjct: 3   CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 62
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
                + HR   +L G  L   +  +V E    GSL DR+R +H         LL    +
Sbjct: 63  NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 115
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            A  +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +
Sbjct: 116 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 110 MIHRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           + H    K  GCC +   +   LV EY+  GSL D +       P+H  + L   L  A+
Sbjct: 68  LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRH-CVGLAQLLLFAQ 119
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
            I   +AYLH    +  I R     N+L + + + K+ DF  + ++PEG
Sbjct: 120 QICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 165

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 110 MIHRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           + H    K  GCC +   +   LV EY+  GSL D +       P+H  + L   L  A+
Sbjct: 67  LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRH-CVGLAQLLLFAQ 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
            I   +AYLH    +  I R     N+L + + + K+ DF  + ++PEG
Sbjct: 119 QICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 164

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 97  YDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEP 156
           +   I  + +  ++ H    +  GC L      LV EY   GS +D + +   P  + E 
Sbjct: 98  WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEI 156
Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 214
             +TH           +AYLH      +I RD K  NIL +E  + KL DF S SI  P
Sbjct: 157 AAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 97  YDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEP 156
           +   I  + +  ++ H    +  GC L      LV EY   GS +D + +   P  + E 
Sbjct: 59  WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEI 117
Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 214
             +TH           +AYLH      +I RD K  NIL +E  + KL DF S SI  P
Sbjct: 118 AAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L G CLE Q PI LV E++  G L+D +R Q               L +  
Sbjct: 59  KLSHPKLVQLYGVCLE-QAPICLVTEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 111
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
           D+   +AYL       VI RD    N L  E  V K+ DF  +  + + +    TG +  
Sbjct: 112 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 168
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
                   F  +R +      +    + + F E ++       +E+++ +  G R    +
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 228
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
                 Y  ++  C  E P DRP    + ++L ++  S
Sbjct: 229 LASTHVY-QIMNHCWRERPEDRPAFSRLLRQLAEIAES 265

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
           +Q+ H    +L+G  +E +  + +V EY+  GSL D +R +       + LL     K +
Sbjct: 69  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 123
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            D+  A+ YL        + RD    N+L +E+NVAK+ DF  +
Sbjct: 124 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 27  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+
Sbjct: 87  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 139
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 140 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 26  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+
Sbjct: 86  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 138
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 139 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
           +Q+ H    +L+G  +E +  + +V EY+  GSL D +R +       + LL     K +
Sbjct: 54  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 108
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            D+  A+ YL        + RD    N+L +E+NVAK+ DF  +
Sbjct: 109 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 27  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+
Sbjct: 87  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 139
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 140 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
           +Q+ H    +L+G  +E +  + +V EY+  GSL D +R +       + LL     K +
Sbjct: 60  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 114
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            D+  A+ YL        + RD    N+L +E+NVAK+ DF  +
Sbjct: 115 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 19  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+
Sbjct: 79  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 131
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 132 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
           +Q+ H    +L+G  +E +  + +V EY+  GSL D +R +       + LL     K +
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 295
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            D+  A+ YL        + RD    N+L +E+NVAK+ DF  +
Sbjct: 296 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 65  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 125 LQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 181
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 182 LVTEDNVMKIADFGLARDI 200

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 4   SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+
Sbjct: 64  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 117 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 4   SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+
Sbjct: 64  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 117 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 54  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 113
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 114 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 170
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 171 LVTEDNVMKIADFGLARDI 189

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 32/196 (16%)
Query: 40  GKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDC 99
           G ++    +   E E+A       + + + SF  +Y+G  +     V+K D  + R+   
Sbjct: 1   GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK----GVVK-DEPETRV--- 52
Query: 100 CINNIVYASQMIHRCFF----------------KLIGCCLETQIPILVFEYINCGSLADR 143
            I  +  A+ M  R  F                +L+G   + Q  +++ E +  G L   
Sbjct: 53  AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 112
Query: 144 IRIQHNPQPQHEPLL----LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE 199
           +R    P+ ++ P+L    L+  +++A +IA+ +AYL+       + RD    N +  E+
Sbjct: 113 LR-SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAED 168
Query: 200 NVAKLFDFSFSISIPE 215
              K+ DF  +  I E
Sbjct: 169 FTVKIGDFGMTRDIXE 184

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 107 ASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
           +SQ+ H+    +I    E     LV EYI   +L++ I         H PL +   +   
Sbjct: 65  SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE-------SHGPLSVDTAINFT 117
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL 218
             I + I + H      ++ RD K  NIL +     K+FDF  + ++ E  L
Sbjct: 118 NQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 57  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 116
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 117 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 173
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 174 LVTEDNVMKIADFGLARDI 192

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 65  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 125 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 181
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 182 LVTEDNVMKIADFGLARDI 200

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
           KE+E+       E+V+ + +F  + K   + + +++ + ++   R     I  +   S++
Sbjct: 9   KEIEV-------EEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRV 59
Query: 111 IHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
            H    KL G CL    P+ LV EY   GSL +   + H  +P        H +      
Sbjct: 60  NHPNIVKLYGACLN---PVCLVMEYAEGGSLYN---VLHGAEPLPY-YTAAHAMSWCLQC 112
Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILF-NEENVAKLFDFSFSISI 213
           +  +AYLH   P+ +I RD K  N+L      V K+ DF  +  I
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 157

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 58  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 117
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 118 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 174
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 175 LVTEDNVMKIADFGLARDI 193

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 125 TQIPIL--VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
           TQ P L  V EY++ GSL    R+ H      E L    RL +A D+A  + YLH   P 
Sbjct: 104 TQPPNLSIVTEYLSRGSL---YRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNRNP- 158
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFS 210
           P++ RD K  N+L +++   K+ DF  S
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLS 186

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
           S+ + EI        + I   SF T+YKG +  +  + ++   A  P+      N +   
Sbjct: 1   SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            +  H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+
Sbjct: 61  RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 113
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             A  + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 114 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
           KE+E+       E+V+ + +F  + K   + + +++ + ++   R     I  +   S++
Sbjct: 8   KEIEV-------EEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRV 58
Query: 111 IHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
            H    KL G CL    P+ LV EY   GSL +   + H  +P        H +      
Sbjct: 59  NHPNIVKLYGACLN---PVCLVMEYAEGGSLYN---VLHGAEPLPY-YTAAHAMSWCLQC 111
Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILF-NEENVAKLFDFSFSISI 213
           +  +AYLH   P+ +I RD K  N+L      V K+ DF  +  I
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 50  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 109
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 110 LQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 166
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 167 LVTEDNVMKIADFGLARDI 185

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 65  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 125 LQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 181
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 182 LVTEDNVMKIADFGLARDI 200

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 106 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 165
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 166 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 222
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 223 LVTEDNVMKIADFGLARDI 241

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           + ++K DA++  + D      +      H+    L+G C +     ++ EY + G+L + 
Sbjct: 65  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           ++ +  P       P H P   L     +  A  +A  + YL     +  I RD    N+
Sbjct: 125 LQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 181
Query: 195 LFNEENVAKLFDFSFSISI 213
           L  E+NV K+ DF  +  I
Sbjct: 182 LVTEDNVMKIADFGLARDI 200

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIR---------IQHN--------PQPQHEPLLL 159
           KL+G C   +   L+FEY+  G L + +R         + H+          P   PL  
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
             +L IA+ +A  +AYL     R  + RD    N L  E  V K+ DF  S +I
Sbjct: 174 AEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 11/110 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-----QHEPLLLTHR 162
           + + H    K  G C+E    I+VFEY+  G L   +R  H P        + P  LT  
Sbjct: 70  TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR-AHGPDAVLMAEGNPPTELTQS 128
Query: 163 --LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             L IA+ IA  + YL     +  + RD    N L  E  + K+ DF  S
Sbjct: 129 QMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 55  IATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMK--------FDASKPRMYDCCINNIV 105
           +A N  + EK I K  F  ++KG   +++ +  +K         +      +      + 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
             S + H    KL G  L    P +V E++ CG L  R+  + +      P+  + +L++
Sbjct: 76  IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH------PIKWSVKLRL 127
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENV---AKLFDFSFS 210
             DIA  I Y+    P P++ RD +  NI     +EN    AK+ DFS S
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHNPQPQHEP-------LLLTHRL 163
           H     L+G C +   P++V  E+   G+L+  +R + N    ++P       L L H +
Sbjct: 92  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
             +  +A  + +L     R  I RD    NIL +E+NV K+ DF  +  I
Sbjct: 152 XYSFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDI 198

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ---------HEPLL 158
           + + H+   +  G C E +  ++VFEY+  G L +R    H P  +           PL 
Sbjct: 98  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
           L   L +A  +A  + YL  G     + RD    N L  +  V K+ DF  S  I
Sbjct: 157 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ---------HEPLL 158
           + + H+   +  G C E +  ++VFEY+  G L +R    H P  +           PL 
Sbjct: 69  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
           L   L +A  +A  + YL  G     + RD    N L  +  V K+ DF  S  I
Sbjct: 128 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 179

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ---------HEPLL 158
           + + H+   +  G C E +  ++VFEY+  G L +R    H P  +           PL 
Sbjct: 75  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
           L   L +A  +A  + YL  G     + RD    N L  +  V K+ DF  S  I
Sbjct: 134 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 185

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +L G C + +   ++ EY+  G L + +R ++H  Q Q         L++ KD+ 
Sbjct: 69  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 121
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A+ YL     +  + RD    N L N++ V K+ DF  S
Sbjct: 122 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
           + EI        + I   SF T+YKG +  +  + ++   A  P+      N +    + 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+  A
Sbjct: 62  RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIARQTA 114
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 115 QGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 32/184 (17%)
Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI 111
           E E+A       + + + SF  +Y+G  +     V+K D  + R+    I  +  A+ M 
Sbjct: 4   EWEVAREKITMSRELGQGSFGMVYEGVAK----GVVK-DEPETRV---AIKTVNEAASMR 55
Query: 112 HRCFF----------------KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHE 155
            R  F                +L+G   + Q  +++ E +  G L   +R    P+ ++ 
Sbjct: 56  ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR-SLRPEMENN 114
Query: 156 PLL----LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 211
           P+L    L+  +++A +IA+ +AYL+       + RD    N +  E+   K+ DF  + 
Sbjct: 115 PVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
Query: 212 SIPE 215
            I E
Sbjct: 172 DIXE 175

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +L G C + +   ++ EY+  G L + +R ++H  Q Q         L++ KD+ 
Sbjct: 63  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 115
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A+ YL     +  + RD    N L N++ V K+ DF  S
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +L G C + +   ++ EY+  G L + +R ++H  Q Q         L++ KD+ 
Sbjct: 63  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 115
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A+ YL     +  + RD    N L N++ V K+ DF  S
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +L G C + +   ++ EY+  G L + +R ++H  Q Q         L++ KD+ 
Sbjct: 62  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 114
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A+ YL     +  + RD    N L N++ V K+ DF  S
Sbjct: 115 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +L G C + +   ++ EY+  G L + +R ++H  Q Q         L++ KD+ 
Sbjct: 58  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 110
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A+ YL     +  + RD    N L N++ V K+ DF  S
Sbjct: 111 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +L G C + +   ++ EY+  G L + +R ++H  Q Q         L++ KD+ 
Sbjct: 78  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 130
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A+ YL     +  + RD    N L N++ V K+ DF  S
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
           + EI        + I   SF T+YKG +  +  + ++   A  P+      N +    + 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            H      +G   + Q+ I V ++    SL   +   H  + + E + L   + IA+  A
Sbjct: 62  RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIARQTA 114
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 115 QGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +L G C + +   ++ EY+  G L + +R ++H  Q Q         L++ KD+ 
Sbjct: 78  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 130
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            A+ YL     +  + RD    N L N++ V K+ DF  S
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 18/167 (10%)
Query: 45  YCTFSAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINN 103
           Y    A E+ ++T        I   SF T+YKG +  +  + ++K     P  +    N 
Sbjct: 30  YWEIEASEVMLSTR-------IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNE 82
Query: 104 IVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
           +    +  H      +G   +  + I V ++    SL   + +Q           +   +
Sbjct: 83  VAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETK------FQMFQLI 135
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            IA+  A  + YLH    + +I RD K +NI  +E    K+ DF  +
Sbjct: 136 DIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 125 TQIPIL--VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
           TQ P L  V EY++ GSL    R+ H      E L    RL +A D+A  + YLH   P 
Sbjct: 104 TQPPNLSIVTEYLSRGSL---YRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNRNP- 158
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFS 210
           P++ R+ K  N+L +++   K+ DF  S
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLS 186

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 55  IATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMK--------FDASKPRMYDCCINNIV 105
           +A N  + EK I K  F  ++KG   +++ +  +K         +      +      + 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
             S + H    KL G  L    P +V E++ CG L  R+  + +      P+  + +L++
Sbjct: 76  IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH------PIKWSVKLRL 127
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENV---AKLFDFSFS 210
             DIA  I Y+    P P++ RD +  NI     +EN    AK+ DF  S
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
           + EI        + I   SF T+YKG +  +  + ++   A  P+      N +    + 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            H      +G     Q+ I V ++    SL   +   H  + + E + L   + IA+  A
Sbjct: 62  RHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIARQTA 114
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             + YLH    + +I RD K +NI  +E+   K+ DF  +
Sbjct: 115 QGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           Q  +  F   +  C +T+  +  V EY+N G L   ++ Q     +H           + 
Sbjct: 76  QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY-------SA 128
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
           +I+ A+ YLH    R +I+RD KL N+L + E   KL D+ 
Sbjct: 129 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 166

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           Q  +  F   +  C +T+  +  V EY+N G L   ++ Q     +H           + 
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY-------SA 160
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
           +I+ A+ YLH    R +I+RD KL N+L + E   KL D+ 
Sbjct: 161 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 198

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHE-PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
           +V EY   GS++D IR+++    + E   +L   LK        + YLH  F R  I RD
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK-------GLEYLH--FMRK-IHRD 150
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
            K  NIL N E  AKL DF  +
Sbjct: 151 IKAGNILLNTEGHAKLADFGVA 172

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	309
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-44
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-40
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-39
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-29
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-20
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-19
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-16
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-16
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-14
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-11
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-11
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-10
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-10
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	7e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-09
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-09
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-09
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	7e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-09
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	8e-09
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-08
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-08
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-08
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	6e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	8e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-07
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-07
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-07
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-07
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-07
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	8e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	9e-07
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-06
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-06
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-06
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-06
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-06
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-06
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	5e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-06
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	7e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	7e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	9e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	6e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	7e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	8e-05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	8e-04
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  152 bits (387), Expect = 2e-44
 Identities = 67/297 (22%), Positives = 108/297 (36%), Gaps = 54/297 (18%)

Query: 47  TFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQE-RLISVMKFDASKPRMYDCCINNIV 105
                +LE ATNN+D + +I    F  +YKG  ++   +++ +      +  +     I 
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87

Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
             S   H     LIG C E    IL+++Y+  G+L   +   +        +    RL+I
Sbjct: 88  TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEI 144

Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG--------- 216
               A  + YLH      +I RD K  NIL +E  V K+ DF  S    E          
Sbjct: 145 CIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVV 201

Query: 217 -------------------------------ELLTGLRAFDLARLNEDDGYVALRDHVKK 245
                                          E+L    A   +   E    V L +   +
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM---VNLAEWAVE 258

Query: 246 YFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK 302
                +L +I+DP +          + L+ +     +C+  S  DRP+M DV  KL+
Sbjct: 259 SHNNGQLEQIVDPNLADKIR----PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  141 bits (357), Expect = 5e-40
 Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 67/311 (21%)

Query: 47  TFSAKELEIATNNYDSEKVIMKRS------FYTLYKGFCQERLISVMKFDASKPRM---- 96
           +FS  EL+  TNN+D   + +  +      F  +YKG+     ++V K  A         
Sbjct: 14  SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73

Query: 97  YDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEP 156
                  I   ++  H    +L+G   +     LV+ Y+  GSL DR+           P
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGT-PP 129

Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
           L    R KIA+  AN I +LH       I RD K +NIL +E   AK+ DF  + +  + 
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186

Query: 217 ---------------------------------------ELLTGLRAFDLARLNEDDGYV 237
                                                  E++TGL A D  R  +     
Sbjct: 187 AQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL---- 242

Query: 238 ALRDHVKKYFEEDR-LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVD 296
            L D  ++  +E++ + + ID   M D         ++A   +  +C++E    RP +  
Sbjct: 243 -LLDIKEEIEDEEKTIEDYIDKK-MNDAD----STSVEAMYSVASQCLHEKKNKRPDIKK 296

Query: 297 VAKKLKQMYRS 307
           V + L++M  S
Sbjct: 297 VQQLLQEMTAS 307

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  140 bits (356), Expect = 1e-39
 Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 61/303 (20%)

Query: 47  TFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQE-RLISVMKFDASKPRMYD------- 98
            FS +EL++A++N+ ++ ++ +  F  +YKG   +  L++V +    + +  +       
Sbjct: 19  RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEV 78

Query: 99  CCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL 158
             I+  V      HR   +L G C+     +LV+ Y+  GS+A  +           PL 
Sbjct: 79  EMISMAV------HRNLLRLRGFCMTPTERLLVYPYMANGSVASCL---RERPESQPPLD 129

Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-- 216
              R +IA   A  +AYLH      +I RD K +NIL +EE  A + DF  +  +     
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 189

Query: 217 -------------------------------------ELLTGLRAFDLARLNEDDGYVAL 239
                                                EL+TG RAFDLARL  DD  V L
Sbjct: 190 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-VML 248

Query: 240 RDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK 299
            D VK   +E +L  ++D  + G+      +++++    +   C   SP++RP M +V +
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYK----DEEVEQLIQVALLCTQSSPMERPKMSEVVR 304

Query: 300 KLK 302
            L+
Sbjct: 305 MLE 307

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  111 bits (280), Expect = 8e-29
 Identities = 50/322 (15%), Positives = 95/322 (29%), Gaps = 76/322 (23%)

Query: 48  FSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYA 107
              + L   +      +V  +  F  ++K       ++V  F     + +      +   
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQN-EYEVYSL 72

Query: 108 SQMIHRCFFKLIGCCLETQIP----ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
             M H    + IG             L+  +   GSL+D ++           +      
Sbjct: 73  PGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK--------ANVVSWNELC 124

Query: 164 KIAKDIANAIAYLH------VGFPRPVIF-RDFKLSNILFNEENVAKLFDFSFSISIPEG 216
            IA+ +A  +AYLH          +P I  RD K  N+L      A + DF  ++    G
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184

Query: 217 ---------------------------------------------ELLTGLRAFDLARLN 231
                                                        EL +   A D     
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV-- 242

Query: 232 EDDGYVALRDHVKKYFEEDRLNEII-----DPLIMGDRSCSGKEQQLQAYAHLIFECVNE 286
            D+  +   + + ++   + + E++      P++   R    K   +      I EC + 
Sbjct: 243 -DEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVL---RDYWQKHAGMAMLCETIEECWDH 298

Query: 287 SPVDRPTMVDVAKKLKQMYRSC 308
               R +   V +++ QM R  
Sbjct: 299 DAEARLSAGCVGERITQMQRLT 320

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 88.5 bits (220), Expect = 2e-20
 Identities = 54/290 (18%), Positives = 95/290 (32%), Gaps = 65/290 (22%)

Query: 54  EIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHR 113
            I     + E+V+ + +F  + K   + + +++ + +          I  +   S++ H 
Sbjct: 4   MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--SESERKAFIVELRQLSRVNHP 61

Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
              KL G C       LV EY   GSL + +                H +      +  +
Sbjct: 62  NIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPL----PYYTAAHAMSWCLQCSQGV 115

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSISI---------------PE-- 215
           AYLH   P+ +I RD K  N+L      V K+ DF  +  I               PE  
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF 175

Query: 216 --------------G----ELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEIID 257
                         G    E++T  + FD            +   V       R   +I 
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFD----EIGGPAFRIMWAV---HNGTRP-PLIK 227

Query: 258 PLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
                  +        +    L+  C ++ P  RP+M ++ K +  + R 
Sbjct: 228 -------NLP------KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 85.3 bits (211), Expect = 4e-19
 Identities = 47/328 (14%), Positives = 95/328 (28%), Gaps = 79/328 (24%)

Query: 48  FSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCIN--NIV 105
            +A E  +  +N    ++I +  +  +YKG   ER ++V  F  +  + +   IN  NI 
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNF---INEKNIY 59

Query: 106 YASQMIHRCFFKLIGCCLETQIPI-----LVFEYINCGSLADRIRIQHNPQPQHEPLLLT 160
               M H    + I               LV EY   GSL   +                
Sbjct: 60  RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS--------LHTSDWV 111

Query: 161 HRLKIAKDIANAIAYLHVGFPR------PVIFRDFKLSNILFNEEN--------VAKLFD 206
              ++A  +   +AYLH   PR       +  RD    N+L   +         ++    
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171

Query: 207 FSFSISIPEG----------------ELLTGLRAFD---------------------LAR 229
            +  +   E                 E+L G                            R
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231

Query: 230 LNEDDGYVALRDHVKKYFEEDRLNEIIDPLI-----MGDR-----SCSGKEQQLQAYAHL 279
             +     ++ ++   +  E   +   + +         R     +       +++    
Sbjct: 232 CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKET 291

Query: 280 IFECVNESPVDRPTMVDVAKKLKQMYRS 307
           I +C ++    R T     +++ ++   
Sbjct: 292 IEDCWDQDAEARLTAQXAEERMAELMMI 319

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 63/300 (21%), Positives = 94/300 (31%), Gaps = 78/300 (26%)

Query: 53  LEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINN----IVYAS 108
           LEI       E++I    F  +Y+ F     ++V              I N        +
Sbjct: 2   LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
            + H     L G CL+     LV E+   G L   +  +  P            +  A  
Sbjct: 62  MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP--------PDILVNWAVQ 113

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEE--------NVAKLFDFSFSISI------- 213
           IA  + YLH     P+I RD K SNIL  ++         + K+ DF  +          
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS 173

Query: 214 ---------PEG--------------------ELLTGLRAFDLARLNEDDGYVALRDHVK 244
                    PE                     ELLTG   F       D   VA    + 
Sbjct: 174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR----GIDGLAVAYGVAMN 229

Query: 245 KYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
           K      L  I         +C       + +A L+ +C N  P  RP+  ++  +L  +
Sbjct: 230 KL----AL-PIPS-------TCP------EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 12/168 (7%)

Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISV--MKFDASKPRMYDCCINNIVYAS 108
           K   I     +    + +     L+KG  Q   I V  +K      R             
Sbjct: 3   KHSGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLR 62

Query: 109 QMIHRCFFKLIGCCLETQIPIL--VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
              H     ++G C     P    +  ++  GSL + +      +  +  +  +  +K A
Sbjct: 63  IFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLH-----EGTNFVVDQSQAVKFA 117

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL--FDFSFSIS 212
            D+A  +A+LH      +        +++ +E+  A++   D  FS  
Sbjct: 118 LDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 56/309 (18%), Positives = 102/309 (33%), Gaps = 84/309 (27%)

Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISV---------MKFDASKPRMYDC 99
            ++   +A N  + EK I K  F  ++KG   +    V          + +      +  
Sbjct: 10  KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69

Query: 100 CINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLL 159
               +   S + H    KL G       P +V E++ CG L  R+    +   +  P+  
Sbjct: 70  FQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL---LD---KAHPIKW 121

Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-----VAKLFD-------- 206
           + +L++  DIA  I Y+      P++ RD +  NI     +      AK+ D        
Sbjct: 122 SVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV 180

Query: 207 -------------------------------FSFSISIPEGELLTGLRAFDLARLNEDDG 235
                                          +SF++ +    +LTG   FD        G
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL--YTILTGEGPFD----EYSYG 234

Query: 236 YVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMV 295
            +   + ++   E  R   I +        C           ++I  C +  P  RP   
Sbjct: 235 KIKFINMIR--EEGLRP-TIPE-------DCP------PRLRNVIELCWSGDPKKRPHFS 278

Query: 296 DVAKKLKQM 304
            + K+L ++
Sbjct: 279 YIVKELSEL 287

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 77.1 bits (190), Expect = 3e-16
 Identities = 50/319 (15%), Positives = 100/319 (31%), Gaps = 79/319 (24%)

Query: 50  AKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCIN--NIVYA 107
           A+ + +       ++ I K  F  +++G  +   ++V  F + + R +        I   
Sbjct: 41  ARTIVL-------QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSW---FREAEIYQT 90

Query: 108 SQMIHRCFFKLIGCCLETQIPI----LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
             + H      I    +         LV +Y   GSL D +            + +   +
Sbjct: 91  VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--------RYTVTVEGMI 142

Query: 164 KIAKDIANAIAYLHVGFP----RPVIF-RDFKLSNILFNEENVAKLFDFSFSISIPEG-- 216
           K+A   A+ +A+LH+       +P I  RD K  NIL  +     + D   ++       
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202

Query: 217 ------------------ELLTGLRAFD-------------------LARLNEDDGYVAL 239
                             E+L                          +AR     G    
Sbjct: 203 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH-- 260

Query: 240 RDHVKKYFEEDRLNEIIDPLI-----MGDR----SCSGKEQQLQAYAHLIFECVNESPVD 290
            D+   Y++    +  ++ +         R    +     + L+  A ++ EC   +   
Sbjct: 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 320

Query: 291 RPTMVDVAKKLKQMYRSCA 309
           R T + + K L Q+ +   
Sbjct: 321 RLTALRIKKTLSQLSQQEG 339

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 75.9 bits (187), Expect = 7e-16
 Identities = 53/321 (16%), Positives = 101/321 (31%), Gaps = 85/321 (26%)

Query: 50  AKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKF----DASKPRMYDCCINNIV 105
           AK++++        K I K  +  ++ G  +   ++V  F    +AS  R  +      +
Sbjct: 36  AKQIQM-------VKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETE------I 82

Query: 106 YASQMI-HRCFFKLIGCCLETQIPI----LVFEYINCGSLADRIRIQHNPQPQHEPLLLT 160
           Y + ++ H      I   ++         L+ +Y   GSL D ++           L   
Sbjct: 83  YQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK--------STTLDAK 134

Query: 161 HRLKIAKDIANAIAYLHVGFPR-----PVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 215
             LK+A    + + +LH           +  RD K  NIL  +     + D   ++    
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194

Query: 216 G--------------------ELLTGLRAFD-------------------LARLNEDDGY 236
                                E+L      +                   +AR     G 
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI 254

Query: 237 VALRDHVKKYFEEDRLNEIIDPLI-----MGDR----SCSGKEQQLQAYAHLIFECVNES 287
           V   ++   Y +    +   + +         R    +    ++ L+    L+ EC   +
Sbjct: 255 V--EEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHN 312

Query: 288 PVDRPTMVDVAKKLKQMYRSC 308
           P  R T + V K L +M  S 
Sbjct: 313 PASRLTALRVKKTLAKMSESQ 333

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 75.4 bits (186), Expect = 8e-16
 Identities = 33/164 (20%), Positives = 68/164 (41%), Gaps = 7/164 (4%)

Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERL--ISVMKFDASKPRMYDCCINNIVY 106
              +++I   + + ++ I   SF T+++         + ++          +  +  +  
Sbjct: 28  DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAI 87

Query: 107 ASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
             ++ H      +G   +     +V EY++ GSL   +   H      E L    RL +A
Sbjct: 88  MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL---HKSGA-REQLDERRRLSMA 143

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            D+A  + YLH     P++ R+ K  N+L +++   K+ DF  S
Sbjct: 144 YDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 52/312 (16%), Positives = 102/312 (32%), Gaps = 75/312 (24%)

Query: 50  AKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCIN--NIVYA 107
           A+++ +        + + K  +  +++G  Q   ++V  F +   + +        +   
Sbjct: 7   ARDITL-------LECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSW---FRETELYNT 56

Query: 108 SQMIHRCFFKLIGCCLETQIPI----LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
             + H      I   + ++       L+  Y   GSL D ++           L     L
Sbjct: 57  VMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--------LTTLDTVSCL 108

Query: 164 KIAKDIANAIAYLHVGFPR-----PVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-- 216
           +I   IA+ +A+LH+          +  RD K  NIL  +     + D   ++   +   
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168

Query: 217 ------------------ELLTGLRAFDLARLNED-DGY--------VALRDHVKKYFEE 249
                             E+L      D     +  D +        VA R       E+
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228

Query: 250 DRL---NEI-IDPLIMGDRSCSGKEQQ-------------LQAYAHLIFECVNESPVDRP 292
            +    + +  DP     R     +QQ             L + A L+ EC  ++P  R 
Sbjct: 229 YKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARL 288

Query: 293 TMVDVAKKLKQM 304
           T + + K L ++
Sbjct: 289 TALRIKKTLTKI 300

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
             + H    K IG   + +    + EYI  G+L   I+   +  P       + R+  AK
Sbjct: 62  RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP------WSQRVSFAK 115

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
           DIA+ +AYLH      +I RD    N L  E     + DF  +  + + +    
Sbjct: 116 DIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 10/96 (10%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H      +G     Q+ I V ++    SL   +              +   + IA+  A 
Sbjct: 79  HVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHASETK------FEMKKLIDIARQTAR 131

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            + YLH    + +I RD K +NI  +E+N  K+ DF
Sbjct: 132 GMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDF 164

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 64.3 bits (157), Expect = 6e-12
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 11/171 (6%)

Query: 38  SNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRM 96
           S  +     +   +E +I     +  ++I K  F  +Y G    E  I ++  +      
Sbjct: 13  SFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQ 72

Query: 97  YDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEP 156
                  ++   Q  H      +G C+      ++       +L   +R           
Sbjct: 73  LKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV------ 126

Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
           L +    +IA++I   + YLH    + ++ +D K  N+ ++   V  + DF
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDNGKV-VITDF 173

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 62.3 bits (151), Expect = 3e-11
 Identities = 28/192 (14%), Positives = 58/192 (30%), Gaps = 26/192 (13%)

Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISV------MK-FDASKPRMYDCCINN 103
            E ++ +       ++ + +F  +Y+    +   +       +K    + P  +      
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117

Query: 104 IVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
           +      +   F K     L     +LV E  + G+L +   I        + +     +
Sbjct: 118 MERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLN--AINLYKNTPEKVMPQGLVI 175

Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA-----------KLFDFSFSI- 211
             A  +   I  +H      +I  D K  N +     +             L D   SI 
Sbjct: 176 SFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSID 232

Query: 212 --SIPEGELLTG 221
               P+G + T 
Sbjct: 233 MKLFPKGTIFTA 244

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 60.8 bits (148), Expect = 7e-11
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 14/177 (7%)

Query: 37  ASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKF-DASKP 94
            S+G+ N Y  F    + I   +Y   + + +  F  +       +     +K     + 
Sbjct: 10  HSSGRENLY--FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQ 67

Query: 95  RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP----ILVFEYINCGSLADRIRIQHNP 150
           +  +             H    +L+  CL  +       L+  +   G+L + I    + 
Sbjct: 68  QDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD- 126

Query: 151 QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
             +   L     L +   I   +  +H    +    RD K +NIL  +E    L D 
Sbjct: 127 --KGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDL 178

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR-LKIAKDIANAIAYLHVGFPRPVIFRD 188
           +++EY+   S+             +   +       I K + N+ +Y+H    + +  RD
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRD 177

Query: 189 FKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
            K SNIL ++    KL DF  S  + + ++  
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIKG 209

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 59.8 bits (145), Expect = 3e-10
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 28/131 (21%)

Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           ++ H    +L+G C     P  ++ E++  G+L D +R + N Q     +LL     +A 
Sbjct: 272 EIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLL----YMAT 325

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
            I++A+ YL     +  I R+    N L  E ++ K+ DF                   L
Sbjct: 326 QISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFG------------------L 364

Query: 228 ARLNEDDGYVA 238
           +RL   D Y A
Sbjct: 365 SRLMTGDTYTA 375

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 59.9 bits (145), Expect = 3e-10
 Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 27/130 (20%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
           ++ H    +L     E  I I V EY++ GSL D ++     +    P L+     +A  
Sbjct: 318 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLK-GETGKYLRLPQLV----DMAAQ 371

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
           IA+ +AY+        + RD + +NIL  E  V K+ DF                   LA
Sbjct: 372 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG------------------LA 410

Query: 229 RLNEDDGYVA 238
           RL ED+ Y A
Sbjct: 411 RLIEDNEYTA 420

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 59.0 bits (143), Expect = 5e-10
 Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 27/130 (20%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
           ++ H    +L     E  I I V EY++ GSL D ++     +    P L+     +A  
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLK-GETGKYLRLPQLV----DMAAQ 288

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
           IA+ +AY+        + RD + +NIL  E  V K+ DF                   LA
Sbjct: 289 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG------------------LA 327

Query: 229 RLNEDDGYVA 238
           RL ED+ Y A
Sbjct: 328 RLIEDNEYTA 337

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 59.3 bits (143), Expect = 5e-10
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 10/100 (10%)

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
              +P+L  EY   G L   +    N     E         +  DI++A+ YLH      
Sbjct: 89  PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG----PIRTLLSDISSALRYLH---ENR 141

Query: 184 VIFRDFKLSNILF---NEENVAKLFDFSFSISIPEGELLT 220
           +I RD K  NI+     +  + K+ D  ++  + +GEL T
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 181

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 29/131 (22%)

Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            + H    KL      T+ PI ++ E++  GSL D ++       +     L   +  + 
Sbjct: 239 TLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLK-----SDEGSKQPLPKLIDFSA 291

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
            IA  +A++     R  I RD + +NIL +   V K+ DF                   L
Sbjct: 292 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFG------------------L 330

Query: 228 ARLNEDDGYVA 238
           AR+ ED+ Y A
Sbjct: 331 ARVIEDNEYTA 341

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 58.1 bits (141), Expect = 7e-10
 Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 28/136 (20%)

Query: 78  FCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC 137
           F  E   SVMK        ++C  +++V           +L+G   + Q  +++ E +  
Sbjct: 75  FLNE--ASVMK-------EFNC--HHVV-----------RLLGVVSQGQPTLVIMELMTR 112

Query: 138 GSLAD---RIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
           G L      +R      P   P  L+  +++A +IA+ +AYL+       + RD    N 
Sbjct: 113 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 169

Query: 195 LFNEENVAKLFDFSFS 210
           +  E+   K+ DF  +
Sbjct: 170 MVAEDFTVKIGDFGMT 185

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 57.6 bits (140), Expect = 7e-10
 Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 29/131 (22%)

Query: 109 QMIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           Q+ H+   +L      TQ PI  + EY+  GSL D ++      P    L +   L +A 
Sbjct: 64  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMAA 116

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
            IA  +A++     R  I RD + +NIL ++    K+ DF                   L
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFG------------------L 155

Query: 228 ARLNEDDGYVA 238
           ARL ED+ Y A
Sbjct: 156 ARLIEDNEYTA 166

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 58.3 bits (141), Expect = 9e-10
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 125 TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPV 184
             +  +V EY+   SL              + L +   +    +I  A++YLH      +
Sbjct: 156 DPVGYIVMEYVGGQSLKRSKG---------QKLPVAEAIAYLLEILPALSYLH---SIGL 203

Query: 185 IFRDFKLSNILFNEENVAKLFDF 207
           ++ D K  NI+  EE + KL D 
Sbjct: 204 VYNDLKPENIMLTEEQL-KLIDL 225

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 29/128 (22%)

Query: 112 HRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
           H    +LIG C + Q PI  V E +  G     +R       +   L +   L++  D A
Sbjct: 171 HPNIVRLIGVCTQKQ-PIYIVMELVQGGDFLTFLR------TEGARLRVKTLLQMVGDAA 223

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARL 230
             + YL     +  I RD    N L  E+NV K+ DF                   ++R 
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFG------------------MSRE 262

Query: 231 NEDDGYVA 238
             D  Y A
Sbjct: 263 EADGVYAA 270

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 57.8 bits (139), Expect = 1e-09
 Identities = 9/86 (10%), Positives = 20/86 (23%), Gaps = 4/86 (4%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           L+    +   L                  +     +   +    A L     + ++   F
Sbjct: 165 LLMPAASV-DLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVHGHF 220

Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
              N+    +    L D S    +  
Sbjct: 221 TPDNLFIMPDGRLMLGDVSALWKVGT 246

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 56.9 bits (137), Expect = 2e-09
 Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 4/115 (3%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            +   ++     +  +    F Y     +L     +  +    H+ L+   RL++   + 
Sbjct: 157 KKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVI 216

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAF 225
             +A LH      ++    +  +I+ ++     L  F   +      + +  R F
Sbjct: 217 RLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGF 268

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 28/123 (22%)

Query: 117 KLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
           +L+G C     P  ++ E++  G+L D +R + N Q     +LL     +A  I++A+ Y
Sbjct: 73  QLLGVCTREP-PFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLL----YMATQISSAMEY 126

Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDG 235
           L     +  I RD    N L  E ++ K+ DF                   L+RL   D 
Sbjct: 127 LE---KKNFIHRDLAARNCLVGENHLVKVADFG------------------LSRLMTGDT 165

Query: 236 YVA 238
           Y A
Sbjct: 166 YTA 168

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 9/103 (8%)

Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           Q+ H    +L+G  +E +  + +V EY+  GSL D +R            LL    K + 
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGRSVLGGDCLL----KFSL 296

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           D+  A+ YL        + RD    N+L +E+NVAK+ DF  +
Sbjct: 297 DVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 12/157 (7%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC-QERLISVMK---FDASKPRMYDCCINNIVYASQMIHR 113
             Y   + I + SF         ++    V+K         +  +     +   + M H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
              +      E     +V +Y   G L  RI          E  +L         I  A+
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRIN-AQKGVLFQEDQIL----DWFVQICLAL 138

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            ++H    R ++ RD K  NI   ++   +L DF  +
Sbjct: 139 KHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 55.3 bits (134), Expect = 5e-09
 Identities = 36/133 (27%), Positives = 49/133 (36%), Gaps = 31/133 (23%)

Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
            ++ H    +L G CLE   PI LV E++  G L+D +R         E LL      + 
Sbjct: 58  MKLSHPKLVQLYGVCLEQA-PICLVTEFMEHGCLSDYLR-TQRGLFAAETLL-----GMC 110

Query: 167 KDIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAF 225
            D+   +AYL         I RD    N L  E  V K+ DF                  
Sbjct: 111 LDVCEGMAYLEEACV----IHRDLAARNCLVGENQVIKVSDFG----------------- 149

Query: 226 DLARLNEDDGYVA 238
            + R   DD Y +
Sbjct: 150 -MTRFVLDDQYTS 161

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 55.3 bits (134), Expect = 5e-09
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 31/133 (23%)

Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
             + H    +L G C + + PI ++ EY+  G L + +R +   + Q + LL     ++ 
Sbjct: 74  MNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLR-EMRHRFQTQQLL-----EMC 126

Query: 167 KDIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAF 225
           KD+  A+ YL    F    + RD    N L N++ V K+ DF                  
Sbjct: 127 KDVCEAMEYLESKQF----LHRDLAARNCLVNDQGVVKVSDFG----------------- 165

Query: 226 DLARLNEDDGYVA 238
            L+R   DD Y +
Sbjct: 166 -LSRYVLDDEYTS 177

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 55.7 bits (134), Expect = 6e-09
 Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 12/148 (8%)

Query: 70  SFYTLYKGFC---QERL-ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLET 125
              T+         E + +  +  +A    M       +  +    H          +  
Sbjct: 39  DLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD 98

Query: 126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVI 185
               +V  ++  GS  D I   H     +E  +      I + +  A+ Y+H       +
Sbjct: 99  NELWVVTSFMAYGSAKDLICT-HFMDGMNELAIAY----ILQGVLKALDYIH---HMGYV 150

Query: 186 FRDFKLSNILFNEENVAKLFDFSFSISI 213
            R  K S+IL + +    L     ++S+
Sbjct: 151 HRSVKASHILISVDGKVYLSGLRSNLSM 178

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 112 HRCFFKLIGCCLETQI-PI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
                K  G         + LV EY+  G L D ++ +H  +     LLL      +  I
Sbjct: 83  SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLL-----YSSQI 136

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              + YL     R  + RD    NIL   E   K+ DF  +  +P  +
Sbjct: 137 CKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 55.1 bits (133), Expect = 7e-09
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 11/112 (9%)

Query: 108 SQMIHRCFFKLIGCCLET-QIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
             + H    K  G C    +  + L+ EY+  GSL D ++ +H  +  H  LL       
Sbjct: 97  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQ-----Y 150

Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              I   + YL     +  I RD    NIL   EN  K+ DF  +  +P+ +
Sbjct: 151 TSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 55.4 bits (133), Expect = 7e-09
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
            ++  +   +L     +  +    H+ L+   RL++   +   +A LH      ++    
Sbjct: 182 FLYPRMQS-NLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYL 237

Query: 190 KLSNILFNEENVAKLFDFSFS 210
           +  +I+ ++     L  F   
Sbjct: 238 RPVDIVLDQRGGVFLTGFEHL 258

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 54.6 bits (132), Expect = 8e-09
 Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 108 SQMIHRCFFKLIGCCLETQI-PI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
             + H    K  G C       + L+ EY+  GSL D ++ +H  +  H  LL       
Sbjct: 66  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQ-----Y 119

Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              I   + YL     +  I RD    NIL   EN  K+ DF  +  +P+ +
Sbjct: 120 TSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 54.5 bits (132), Expect = 8e-09
 Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 29/132 (21%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            ++ H    K  G C +     +V EYI+ G L + +R  H    +   LL     ++  
Sbjct: 58  MKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR-SHGKGLEPSQLL-----EMCY 111

Query: 168 DIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFD 226
           D+   +A+L    F    I RD    N L + +   K+ DF                   
Sbjct: 112 DVCEGMAFLESHQF----IHRDLAARNCLVDRDLCVKVSDFG------------------ 149

Query: 227 LARLNEDDGYVA 238
           + R   DD YV+
Sbjct: 150 MTRYVLDDQYVS 161

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 11/108 (10%)

Query: 112 HRCFFKLIGCCLETQI-PI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
           H    K  G C E     I L+ E++  GSL + +  ++  +   +  L       A  I
Sbjct: 82  HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQLK-----YAVQI 135

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              + YL     R  + RD    N+L   E+  K+ DF  + +I   +
Sbjct: 136 CKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 17/113 (15%)

Query: 95  RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQH 154
           R ++  +                L           +  +     +L D +  +   + + 
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLY----------IQMQLCRKENLKDWMNGRCTIEERE 116

Query: 155 EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
             + L     I   IA A+ +LH    + ++ RD K SNI F  ++V K+ DF
Sbjct: 117 RSVCL----HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDF 162

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 39/165 (23%)

Query: 64  KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCIN--NIVYASQMIHRCFFKLIGC 121
           KV    SF        +E    V+K            +N  NIV           KL   
Sbjct: 40  KVFNNISFLRPVDVQMRE--FEVLKK-----------LNHKNIV-----------KLFAI 75

Query: 122 --CLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG 179
                T+  +L+ E+  CGSL   +    N     E       L + +D+   + +L   
Sbjct: 76  EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF----LIVLRDVVGGMNHLR-- 129

Query: 180 FPRPVIFRDFKLSNILF----NEENVAKLFDFSFSISIPEGELLT 220
               ++ R+ K  NI+     + ++V KL DF  +  + + E   
Sbjct: 130 -ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 54.9 bits (132), Expect = 1e-08
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 39/165 (23%)

Query: 64  KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCIN--NIVYASQMIHRCFFKLIGC 121
           KV    SF        +E    V+K            +N  NIV           KL   
Sbjct: 40  KVFNNISFLRPVDVQMRE--FEVLKK-----------LNHKNIV-----------KLFAI 75

Query: 122 --CLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG 179
                T+  +L+ E+  CGSL   +    N     E       L + +D+   + +L   
Sbjct: 76  EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF----LIVLRDVVGGMNHLR-- 129

Query: 180 FPRPVIFRDFKLSNILF----NEENVAKLFDFSFSISIPEGELLT 220
               ++ R+ K  NI+     + ++V KL DF  +  + + E   
Sbjct: 130 -ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
            + +    +L+G CL + + + + + +  G L D +R +H      + LL          
Sbjct: 73  SVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR-EHKDNIGSQYLL-----NWCVQ 125

Query: 169 IANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           IA  + YL         + RD    N+L       K+ DF  +  +   E
Sbjct: 126 IAKGMNYLEDRRL----VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 117 KLIGCCLETQ------IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
           KL+G  L ++      IP+++  ++  G L   +            L L   ++   DIA
Sbjct: 89  KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRIGENPFNLPLQTLVRFMVDIA 147

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             + YL     R  I RD    N +  E+    + DF  S
Sbjct: 148 CGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLS 184

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 117 KLIGCCLETQ-----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           +L+G C+E        P+++  ++  G L   +      +   + + L   LK   DIA 
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL-YSRLETGPKHIPLQTLLKFMVDIAL 158

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            + YL     R  + RD    N +  ++    + DF
Sbjct: 159 GMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADF 191

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 13/159 (8%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQE-RLISVMK----FDASKPRMYDCCINNIVYASQMIH 112
            N+  EK I +  F  +Y+  C    +   +K    FD    +    CI  I    Q+ H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 113 RCFFKLIGCCLETQIPILVFEYINCGSLADRI-RIQHNPQPQHEPLLLTHRLKIAKDIAN 171
               K     +E     +V E  + G L+  I   +   +   E  +     K    + +
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW----KYFVQLCS 147

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           A+ ++H    R V+ RD K +N+      V KL D    
Sbjct: 148 ALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLG 183

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 10/101 (9%)

Query: 117 KLIGCCLETQIPILVFEYINCGSL-----ADRIRIQHNPQPQHEPLLLTHR--LKIAKDI 169
            L+G C      +++ EY   G L          ++ +P         + R  L  +  +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           A  +A+L     +  I RD    N+L    +VAK+ DF  +
Sbjct: 174 AQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLA 211

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 53.3 bits (128), Expect = 3e-08
 Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 7/142 (4%)

Query: 66  IMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLET 125
           +         +            +  S P   D     I        +     +      
Sbjct: 74  LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPK 133

Query: 126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVI 185
               +  +     +L D +  + + + +   + L     I   IA A+ +LH    + ++
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL----HIFIQIAEAVEFLH---SKGLM 186

Query: 186 FRDFKLSNILFNEENVAKLFDF 207
            RD K SNI F  ++V K+ DF
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDF 208

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)

Query: 117 KLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
           +L+G  +E +  + +V EY+  GSL D +R            LL    K + D+  A+ Y
Sbjct: 78  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGRSVLGGDCLL----KFSLDVCEAMEY 132

Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           L        + RD    N+L +E+NVAK+ DF  +
Sbjct: 133 LE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 12/96 (12%)

Query: 117 KLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
            L+G CL ++   L V  Y+  G L + IR      P  + L     +     +A  + Y
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDL-----IGFGLQVAKGMKY 143

Query: 176 LH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           L    F    + RD    N + +E+   K+ DF  +
Sbjct: 144 LASKKF----VHRDLAARNCMLDEKFTVKVADFGLA 175

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 30/128 (23%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H    KLIG   E    I + E    G L   +  ++    +   L+L      +  I  
Sbjct: 72  HPHIVKLIGIIEEEPTWI-IMELYPYGELGHYLE-RNKNSLKVLTLVL-----YSLQICK 124

Query: 172 AIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARL 230
           A+AYL  +      + RD  + NIL       KL DF        G          L+R 
Sbjct: 125 AMAYLESINC----VHRDIAVRNILVASPECVKLGDF--------G----------LSRY 162

Query: 231 NEDDGYVA 238
            ED+ Y  
Sbjct: 163 IEDEDYYK 170

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 13/101 (12%)

Query: 117 KLIGCCLETQIPI-LVFEYINCGSLADRIR---------IQHNPQPQHEPLLLTHRLKIA 166
            L+G C +   P+ ++ E+   G+L+  +R                  + L L H +  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
             +A  + +L     R  I RD    NIL +E+NV K+ DF
Sbjct: 155 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDF 192

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 10/109 (9%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
            + HR   +L G  L   + + V E    GSL DR+R +H         LL    + A  
Sbjct: 77  SLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGH-----FLLGTLSRYAVQ 129

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +
Sbjct: 130 VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 17/156 (10%)

Query: 64  KVIMKRSFYTLYKGFCQERLISV----MKFDASKPRMYDCCINNIVYASQMIHRCFFKLI 119
             I + SF T+YKG   E  + V    ++                     + H    +  
Sbjct: 32  IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 91

Query: 120 GCCLETQIP----ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
                T       +LV E +  G+L   ++       + + + +       + I   + +
Sbjct: 92  DSWESTVKGKKCIVLVTELMTSGTLKTYLK-------RFKVMKIKVLRSWCRQILKGLQF 144

Query: 176 LHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFS 210
           LH   P P+I RD K  NI         K+ D   +
Sbjct: 145 LHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA 179

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 13/110 (11%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
           Q+ +    ++IG C      + V E    G L   ++       Q+  +   + +++   
Sbjct: 74  QLDNPYIVRMIGICEAESWML-VMEMAELGPLNKYLQ-------QNRHVKDKNIIELVHQ 125

Query: 169 IANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           ++  + YL    F    + RD    N+L   ++ AK+ DF  S ++   E
Sbjct: 126 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +  E+ + G+L   I  +   +   + L L    ++ + I   + Y+H    + +I RD 
Sbjct: 97  IQMEFCDKGTLEQWIE-KRRGEKLDKVLAL----ELFEQITKGVDYIH---SKKLINRDL 148

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLT 220
           K SNI   +    K+ DF    S+      T
Sbjct: 149 KPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT 179

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 12/100 (12%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIR---------IQHNPQPQHEPLLLTHRLKIAK 167
            L+G C +     ++ EY + G+L + +R              +   E +     +    
Sbjct: 105 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 164

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            +A  + YL     +  I RD    N+L  E NV K+ DF
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADF 201

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 29/187 (15%), Positives = 62/187 (33%), Gaps = 17/187 (9%)

Query: 36  RASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGF---CQERLISVMKFDAS 92
             S+G          + + +    Y   K I       +++      Q   I  +  + +
Sbjct: 6   HHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA 65

Query: 93  KPRMYDCCINNIVYASQMIHRCFF--KLIGCCLETQIPILVFEYINCGSLADRIRIQHNP 150
             +  D   N I Y +++        +L    +  Q   +V E  N   L   ++     
Sbjct: 66  DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWLK----- 119

Query: 151 QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             + + +    R    K++  A+  +H      ++  D K +N L  +  + KL DF  +
Sbjct: 120 --KKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIA 173

Query: 211 ISIPEGE 217
             +    
Sbjct: 174 NQMQPDT 180

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
            + H    +L+G C  + + + V +Y+  GSL D +R QH      + LL          
Sbjct: 71  SLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVR-QHRGALGPQLLL-----NWGVQ 123

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           IA  + YL       ++ R+    N+L    +  ++ DF  +  +P  +
Sbjct: 124 IAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 18/112 (16%)

Query: 103 NIV-YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRI-RIQHNPQPQHEPLLLT 160
           NIV Y     +          L      +V EY   G LA  I +     Q   E  +L 
Sbjct: 66  NIVRY-----YDRIIDRTNTTL-----YIVMEYCEGGDLASVITKGTKERQYLDEEFVL- 114

Query: 161 HRLKIAKDIANAIAYLH--VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
              ++   +  A+   H        V+ RD K +N+  + +   KL DF  +
Sbjct: 115 ---RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 13/108 (12%)

Query: 112 HRCFFKLIGCCLETQI-PI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
           H    K  GCC +     + LV EY+  GSL D +        +H  + L   L  A+ I
Sbjct: 92  HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP-------RHS-IGLAQLLLFAQQI 143

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              +AYLH    +  I RD    N+L + + + K+ DF  + ++PEG 
Sbjct: 144 CEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 12/100 (12%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIR---------IQHNPQPQHEPLLLTHRLKIAK 167
            L+G C +     ++ EY + G+L + +R              +   E +     +    
Sbjct: 151 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 210

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            +A  + YL     +  I RD    N+L  E NV K+ DF
Sbjct: 211 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADF 247

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 123 LETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
           +ET+  + L+ EY + G + D + + H    + E           + I +A+ Y H    
Sbjct: 83  IETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKE------ARSKFRQIVSAVQYCH---Q 132

Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
           + ++ RD K  N+L + +   K+ DF FS     G  L
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
            + +    +L+G CL + + + + + +  G L D +R +H      + LL          
Sbjct: 73  SVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR-EHKDNIGSQYLL-----NWCVQ 125

Query: 169 IANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           IA  + YL         + RD    N+L       K+ DF  +  +   E
Sbjct: 126 IAKGMNYLEDRRL----VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 13/101 (12%)

Query: 109 QMIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           Q  H    +L G     +   + V EY+  GSL   +R  H+ Q     L     + + +
Sbjct: 106 QFDHPNIIRLEGVVTRGR-LAMIVTEYMENGSLDTFLR-THDGQFTIMQL-----VGMLR 158

Query: 168 DIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            +   + YL  +G+    + RD    N+L +   V K+ DF
Sbjct: 159 GVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDF 195

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 12/96 (12%)

Query: 117 KLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
            L+G CL ++   L V  Y+  G L + IR      P  + L     +     +A  + +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDL-----IGFGLQVAKGMKF 207

Query: 176 L-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           L    F    + RD    N + +E+   K+ DF  +
Sbjct: 208 LASKKF----VHRDLAARNCMLDEKFTVKVADFGLA 239

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 12/100 (12%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIR---------IQHNPQPQHEPLLLTHRLKIAK 167
            L+G C +     ++ EY + G+L + ++           +      E L     +  A 
Sbjct: 139 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY 198

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            +A  + YL     +  I RD    N+L  E+NV K+ DF
Sbjct: 199 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADF 235

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 31/103 (30%), Positives = 39/103 (37%), Gaps = 12/103 (11%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLAD--RIRIQHNPQPQHEPLL-----LTHR--LKIAK 167
            L+G C       L  EY   G+L D  R        P           L+ +  L  A 
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           D+A  + YL     +  I RD    NIL  E  VAK+ DF  S
Sbjct: 150 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS 189

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
           E     LV EYI   +L++ I         H PL +   +     I + I + H      
Sbjct: 82  EDDCYYLVMEYIEGPTLSEYIE-------SHGPLSVDTAINFTNQILDGIKHAH---DMR 131

Query: 184 VIFRDFKLSNILFNEENVAKLFDF 207
           ++ RD K  NIL +     K+FDF
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDF 155

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 12/103 (11%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLAD---------RIRIQHNPQPQHEPLLLTHRLKIAK 167
           K  G C +    I+VFEY+  G L            I +   P+     L L+  L IA 
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            IA+ + YL     +  + RD    N L     + K+ DF  S
Sbjct: 141 QIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMS 180

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 34/157 (21%), Positives = 54/157 (34%), Gaps = 20/157 (12%)

Query: 56  ATNNYDSEKVIMKRSFYTLYKGFCQ-ERLISVMKFDASKPRMYDCCINNIVYASQMIHRC 114
           A +     +  +KR      +      + +  MK  +  P        NIV   Q     
Sbjct: 47  AQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHP--------NIV---QFCSAA 95

Query: 115 FFKLIGCCLETQIPILVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
                         +L+ E   C G L + +           PL     LKI      A+
Sbjct: 96  SIGKEESDTGQAEFLLLTEL--CKGQLVEFL----KKMESRGPLSCDTVLKIFYQTCRAV 149

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            ++H   P P+I RD K+ N+L + +   KL DF  +
Sbjct: 150 QHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSA 185

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 13/173 (7%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC---QERL-ISVMKFDASKPRMYDCCINNIVYASQMIHR 113
           ++Y+ ++VI   +   +   +C   +E++ I  +  +  +  M +  +  I   SQ  H 
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHP 73

Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA---KDIA 170
                    +      LV + ++ GS+ D I+     + +H+  +L     IA   +++ 
Sbjct: 74  NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIV-AKGEHKSGVLDES-TIATILREVL 131

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLR 223
             + YLH       I RD K  NIL  E+   ++ DF  S  +  G  +T  +
Sbjct: 132 EGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 181

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 32/132 (24%), Positives = 45/132 (34%), Gaps = 30/132 (22%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            Q  H    KLIG   E  + I + E    G L   ++           L+       A 
Sbjct: 71  RQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQ-VRKYSLDLASLI-----LYAY 123

Query: 168 DIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFD 226
            ++ A+AYL    F    + RD    N+L +  +  KL DF        G          
Sbjct: 124 QLSTALAYLESKRF----VHRDIAARNVLVSSNDCVKLGDF--------G---------- 161

Query: 227 LARLNEDDGYVA 238
           L+R  ED  Y  
Sbjct: 162 LSRYMEDSTYYK 173

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 13/110 (11%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIR--------IQHNPQPQHEPLLLTHRLKIAKD 168
           +  G C E +  ++VFEY+  G L   +R        +         PL L   L +A  
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166

Query: 169 IANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           +A  + YL  + F    + RD    N L  +  V K+ DF  S  I   +
Sbjct: 167 VAAGMVYLAGLHF----VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 24/117 (20%)

Query: 96  MYDCCINNIV--YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ 153
           +++C    IV  Y +      F+       + +I I   E+++ GSL     +       
Sbjct: 85  LHECNSPYIVGFYGA------FYS------DGEISI-CMEHMDGGSLDQ---VLKKAGRI 128

Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            E +L     K++  +   + YL       ++ RD K SNIL N     KL DF  S
Sbjct: 129 PEQILG----KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 179

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 29/132 (21%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            Q  H    +L G   +++  ++V EY+  GSL   +R +H+ Q     L     + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQL-----VGMLR 154

Query: 168 DIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFD 226
            IA+ + YL  +G+    + RD    NIL N   V K+ DF        G          
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDF--------G---------- 192

Query: 227 LARLNEDDGYVA 238
           L R+ EDD   A
Sbjct: 193 LGRVLEDDPEAA 204

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 29/130 (22%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            Q  H    +L G   + +  +++ EY+  G+L   +R + + +     L     + + +
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQL-----VGMLR 154

Query: 168 DIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFD 226
            IA  + YL ++ +    + RD    NIL N   V K+ DF        G          
Sbjct: 155 GIAAGMKYLANMNY----VHRDLAARNILVNSNLVCKVSDF--------G---------- 192

Query: 227 LARLNEDDGY 236
           L+R+ EDD  
Sbjct: 193 LSRVLEDDPE 202

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 32/149 (21%), Positives = 48/149 (32%), Gaps = 40/149 (26%)

Query: 78  FCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC 137
           F  E    ++         ++    NIV           + IG  L++    ++ E +  
Sbjct: 80  FLME--ALIIS-------KFNH--QNIV-----------RCIGVSLQSLPRFILMELMAG 117

Query: 138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL------HVGFPRPVIFRDFKL 191
           G L   +R       Q   L +   L +A+DIA    YL      H         RD   
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH---------RDIAA 168

Query: 192 SNIL---FNEENVAKLFDFSFSISIPEGE 217
            N L        VAK+ DF  +  I    
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMARDIYRAS 197

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 12/111 (10%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            Q+ +    +LIG C    + + V E    G L   +      +     + +++  ++  
Sbjct: 65  HQLDNPYIVRLIGVCQAEALML-VMEMAGGGPLHKFLV-GKREE-----IPVSNVAELLH 117

Query: 168 DIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            ++  + YL    F    + RD    N+L    + AK+ DF  S ++   +
Sbjct: 118 QVSMGMKYLEEKNF----VHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 28/129 (21%)

Query: 117 KLIGCCLETQ-IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
            LIG  L  + +P ++  Y+  G L   IR      P  + L+          +A  + Y
Sbjct: 86  ALIGIMLPPEGLPHVLLPYMCHGDLLQFIR-SPQRNPTVKDLI-----SFGLQVARGMEY 139

Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDG 235
           L     +  + RD    N + +E    K+ DF        G          LAR   D  
Sbjct: 140 LAE---QKFVHRDLAARNCMLDESFTVKVADF--------G----------LARDILDRE 178

Query: 236 YVALRDHVK 244
           Y +++ H  
Sbjct: 179 YYSVQQHRH 187

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 14/95 (14%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           LVF+ +  G L D +  +           L+ +   KI + +   I  LH      ++ R
Sbjct: 101 LVFDLMKKGELFDYL-TEKVT--------LSEKETRKIMRALLEVICALH---KLNIVHR 148

Query: 188 DFKLSNILFNEENVAKLFDFSFSISIPEGELLTGL 222
           D K  NIL +++   KL DF FS  +  GE L  +
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 183

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 9/104 (8%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +  EY   G+L D I  ++  Q + E        ++ + I  A++Y+H    + +I RD 
Sbjct: 92  IQMEYCENGTLYDLIHSENLNQQRDE------YWRLFRQILEALSYIH---SQGIIHRDL 142

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNED 233
           K  NI  +E    K+ DF  + ++     +  L + +L   +++
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 33/144 (22%), Positives = 49/144 (34%), Gaps = 30/144 (20%)

Query: 78  FCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC 137
           F  E    ++         ++    NIV           + IG  L++    ++ E +  
Sbjct: 121 FLME--ALIIS-------KFNH--QNIV-----------RCIGVSLQSLPRFILLELMAG 158

Query: 138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL-HVGFPRPVIFRDFKLSNILF 196
           G L   +R       Q   L +   L +A+DIA    YL    F    I RD    N L 
Sbjct: 159 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF----IHRDIAARNCLL 214

Query: 197 N---EENVAKLFDFSFSISIPEGE 217
                  VAK+ DF  +  I    
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAG 238

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 14/105 (13%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIR-----------IQHNPQPQHEPLLLTHRLKI 165
            L+G C      +++ EY   G L + +R                +     L L   L  
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           +  +A  +A+L     +  I RD    NIL     + K+ DF  +
Sbjct: 151 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLA 192

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 16/155 (10%)

Query: 60  YDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
           +   + I K SF  ++KG      +   I ++  + ++  + D     I   SQ      
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYV 82

Query: 116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
            K  G  L+     ++ EY+  GS  D +     P P  E  + T    I ++I   + Y
Sbjct: 83  TKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT----ILREILKGLDY 134

Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           LH       I RD K +N+L +E    KL DF  +
Sbjct: 135 LH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 166

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 15/96 (15%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           ++ E +  G L  RI+       +      T R   +I +DI  AI +LH      +  R
Sbjct: 103 IIMECMEGGELFSRIQ-------ERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHR 152

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISIPEGELLT 220
           D K  N+L+    ++ V KL DF F+    +  L T
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT 188

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 49.9 bits (119), Expect = 5e-07
 Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 12/110 (10%)

Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
           Q+ +    +LIG C    + + V E    G L   +      +     + +++  ++   
Sbjct: 392 QLDNPYIVRLIGVCQAEALML-VMEMAGGGPLHKFLV-GKREE-----IPVSNVAELLHQ 444

Query: 169 IANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           ++  + YL    F    + R+    N+L    + AK+ DF  S ++   +
Sbjct: 445 VSMGMKYLEEKNF----VHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 10/84 (11%)

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP 183
              +P +V EY++  +L D +           P+     +++  D   A+ + H      
Sbjct: 87  AGPLPYIVMEYVDGVTLRDIVH-------TEGPMTPKRAIEVIADACQALNFSH---QNG 136

Query: 184 VIFRDFKLSNILFNEENVAKLFDF 207
           +I RD K +NI+ +  N  K+ DF
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDF 160

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 48.9 bits (117), Expect = 7e-07
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 14/95 (14%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           LVF+ +  G L D +  +           L+ +    I + +  A+++LH      ++ R
Sbjct: 177 LVFDLMRKGELFDYL-TEKVA--------LSEKETRSIMRSLLEAVSFLHA---NNIVHR 224

Query: 188 DFKLSNILFNEENVAKLFDFSFSISIPEGELLTGL 222
           D K  NIL ++    +L DF FS  +  GE L  L
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL 259

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 48.8 bits (117), Expect = 8e-07
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 10/78 (12%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +    IN   LA  +R       +  PL     + I + I +A+   H         RD 
Sbjct: 111 VDMRLINGVDLAAMLR-------RQGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDV 160

Query: 190 KLSNILFNEENVAKLFDF 207
           K  NIL + ++ A L DF
Sbjct: 161 KPENILVSADDFAYLVDF 178

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 48.9 bits (117), Expect = 8e-07
 Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 17/165 (10%)

Query: 58  NNYDSEKVIMKRSFYTLYKGF---CQERLISVMKFDASKPRMYDCCINNIVYASQMIHRC 114
             Y   K I       +++      Q   I  +  + +  +  D   N I Y +++    
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 115 FF--KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANA 172
               +L    +  Q   +V E  N   L   ++       + + +    R    K++  A
Sbjct: 69  DKIIRLYDYEITDQYIYMVMECGN-IDLNSWLK-------KKKSIDPWERKSYWKNMLEA 120

Query: 173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           +  +H      ++  D K +N L  +  + KL DF  +  +    
Sbjct: 121 VHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDT 161

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 8/90 (8%)

Query: 119 IGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHV 178
           +G   E     +  E +  GSL+  +R +  P   +E  +        K I   + YLH 
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI----GFYTKQILEGLKYLH- 139

Query: 179 GFPRPVIFRDFKLSNILFNEEN-VAKLFDF 207
                ++ RD K  N+L N  + V K+ DF
Sbjct: 140 --DNQIVHRDIKGDNVLINTYSGVLKISDF 167

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 17/174 (9%)

Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKGF---CQERLISVMKFDASKPRMYDCCINNIV 105
           + + + +    Y   K I       +++      Q   I  +  + +  +  D   N I 
Sbjct: 47  ANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 106

Query: 106 YASQMIHRCFF--KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
           Y +++        +L    +  Q   +V E  N   L   ++       + + +    R 
Sbjct: 107 YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWLK-------KKKSIDPWERK 158

Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              K++  A+  +H      ++  D K +N L  +  + KL DF  +  +    
Sbjct: 159 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDT 208

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 12/111 (10%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            Q  H    KLIG   E  + I + E    G L   ++           L+       A 
Sbjct: 446 RQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQ-VRKFSLDLASLI-----LYAY 498

Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            ++ A+AYL    F    + RD    N+L +  +  KL DF  S  + +  
Sbjct: 499 QLSTALAYLESKRF----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 15/84 (17%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA---KDIANAIAYLHVGFPRPVIF 186
           +V EY   GS++D IR+++    + E         IA   +     + YLH       I 
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDE---------IATILQSTLKGLEYLH---FMRKIH 148

Query: 187 RDFKLSNILFNEENVAKLFDFSFS 210
           RD K  NIL N E  AKL DF  +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA 172

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 17/103 (16%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           LVFE +  GS+   I  + +                 + +D+A+A+ +LH    + +  R
Sbjct: 88  LVFEKMRGGSILSHIHKRRH---------FNELEASVVVQDVASALDFLH---NKGIAHR 135

Query: 188 DFKLSNILF-NEENVA--KLFDFSFSISIPEGELLTGLRAFDL 227
           D K  NIL  +   V+  K+ DF     I      + +   +L
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 17/94 (18%)

Query: 130 LVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
           +  E   C  +L + +  +       EP+       + +   + +A+LH      ++ RD
Sbjct: 95  IAIEL--CAATLQEYVEQKDFAHLGLEPI------TLLQQTTSGLAHLH---SLNIVHRD 143

Query: 189 FKLSNILFNEEN-----VAKLFDFSFSISIPEGE 217
            K  NIL +  N      A + DF     +  G 
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 25/108 (23%), Positives = 35/108 (32%), Gaps = 20/108 (18%)

Query: 117 KLIGCCLETQIPILVFEYINCGSL-----------------ADRIRIQHNPQPQHEPLLL 159
           KL G C +    +L+ EY   GSL                            P    L +
Sbjct: 90  KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149

Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
              +  A  I+  + YL       ++ RD    NIL  E    K+ DF
Sbjct: 150 GDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDF 194

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 14/101 (13%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLAD---------RIRIQHNPQPQHEPLLLTHRLKIAK 167
            L+G   + Q   ++F Y + G L +          +    + +     L     + +  
Sbjct: 76  CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135

Query: 168 DIANAIAYL-HVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
            IA  + YL         + +D    N+L  ++   K+ D 
Sbjct: 136 QIAAGMEYLSSHHV----VHKDLATRNVLVYDKLNVKISDL 172

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 13/130 (10%)

Query: 93  KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQ 151
           KP   +     I     + H+      G   E    + +V E     SL +  +      
Sbjct: 81  KPHQREKMSMEISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHK------ 133

Query: 152 PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 211
            + + L         + I     YLH      VI RD KL N+  NE+   K+ DF  + 
Sbjct: 134 -RRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT 189

Query: 212 SI-PEGELLT 220
            +  +GE   
Sbjct: 190 KVEYDGERKK 199

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 15/96 (15%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           +V E ++ G L  RI+              T R   +I K I  AI YLH      +  R
Sbjct: 136 IVMECLDGGELFSRIQ-------DRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHR 185

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISIPEGELLT 220
           D K  N+L+       + KL DF F+        LT
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 29/117 (24%), Positives = 40/117 (34%), Gaps = 24/117 (20%)

Query: 96  MYDCCINNIV--YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ 153
           +       IV  + +      F         T + I   E +   +       +    P 
Sbjct: 78  LKSHDCPYIVQCFGT------FIT------NTDVFI-AMELMGTCAEKL---KKRMQGPI 121

Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            E +L     K+   I  A+ YL       VI RD K SNIL +E    KL DF  S
Sbjct: 122 PERILG----KMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
            F K     ++ Q+ + V E+   GS+ D I+         E  +      I ++I   +
Sbjct: 89  AFIKKNPPGMDDQLWL-VMEFCGAGSVTDLIKN-TKGNTLKEEWIAY----ICREILRGL 142

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           ++LH      VI RD K  N+L  E    KL DF  S
Sbjct: 143 SHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 13/98 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           +V E    G L +RI +    + +     L+     ++ K + NA+AY H    + V+ +
Sbjct: 97  IVMETCEGGELLERI-VSAQARGKA----LSEGYVAELMKQMMNALAYFH---SQHVVHK 148

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           D K  NILF   +  +  K+ DF  +      E  T  
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA 186

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 20/108 (18%)

Query: 117 KLIGCCLETQIPILVFEYINCGSL-----------------ADRIRIQHNPQPQHEPLLL 159
           KL+G C   +   L+FEY+  G L                 +D         P   PL  
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173

Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF 207
             +L IA+ +A  +AYL     R  + RD    N L  E  V K+ DF
Sbjct: 174 AEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADF 218

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 13/130 (10%)

Query: 93  KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQ 151
           KP   +     I     + H+      G   E    + +V E     SL +  +      
Sbjct: 55  KPHQREKMSMEISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHK------ 107

Query: 152 PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 211
            + + L         + I     YLH      VI RD KL N+  NE+   K+ DF  + 
Sbjct: 108 -RRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT 163

Query: 212 SI-PEGELLT 220
            +  +GE   
Sbjct: 164 KVEYDGERKK 173

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 13/96 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LV E    G L D I I      + +        +I + + + I Y+H      ++ RD 
Sbjct: 103 LVGEVYTGGELFDEI-ISRKRFSEVDAA------RIIRQVLSGITYMH---KNKIVHRDL 152

Query: 190 KLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           K  N+L    +++   ++ DF  S      + +   
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 13/153 (8%)

Query: 60  YDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFK 117
           Y   + I + +  T+Y        + +++ + +  +    +  IN I+   +  +     
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLH 177
            +   L      +V EY+  GSL D +          E  +      + ++   A+ +LH
Sbjct: 82  YLDSYLVGDELWVVMEYLAGGSLTDVVT----ETCMDEGQIAA----VCRECLQALEFLH 133

Query: 178 VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
                 VI RD K  NIL   +   KL DF F 
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 10/91 (10%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LV E  + G +   ++ +  P  ++E             I   + YLH      ++ RD 
Sbjct: 88  LVLEMCHNGEMNRYLKNRVKPFSENEAR------HFMHQIITGMLYLH---SHGILHRDL 138

Query: 190 KLSNILFNEENVAKLFDFSFSISI-PEGELL 219
            LSN+L       K+ DF  +  +    E  
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 13/96 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LV E+   G L ++I I  +   + +         I K I + I YLH      ++ RD 
Sbjct: 123 LVTEFYEGGELFEQI-INRHKFDECDAA------NIMKQILSGICYLH---KHNIVHRDI 172

Query: 190 KLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           K  NIL    N     K+ DF  S    +   L   
Sbjct: 173 KPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           S++ H+      G C+     ILV E++  GSL   ++ ++              L++AK
Sbjct: 67  SKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWK-----LEVAK 120

Query: 168 DIANAIAYL-HVGFPRPVIFRDFKLSNIL--------FNEENVAKLFDFSFSISIPEGE 217
            +A A+ +L         I  +    NIL               KL D   SI++   +
Sbjct: 121 QLAAAMHFLEENTL----IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           L+ EY   G++   ++       +              ++ANA++Y H    + VI RD 
Sbjct: 86  LILEYAPLGTVYRELQ-------KLSKFDEQRTATYITELANALSYCH---SKRVIHRDI 135

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLT 220
           K  N+L       K+ DF +S+  P      
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRTD 166

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 46.4 bits (111), Expect = 4e-06
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 10/91 (10%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           L+ E+   G L   ++       +H            +++A+A+ Y H    R VI RD 
Sbjct: 91  LMLEFAPRGELYKELQ-------KHGRFDEQRSATFMEELADALHYCH---ERKVIHRDI 140

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLT 220
           K  N+L   +   K+ DF +S+  P     T
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRT 171

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 19/110 (17%)

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIR--------------IQHNPQPQHEPLLLTHR 162
            L+G C  +    L+FEY   G L + +R               Q   + + +  +LT  
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172

Query: 163 --LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
             L  A  +A  + +L     +  + RD    N+L     V K+ DF  +
Sbjct: 173 DLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLA 219

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 13/96 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LV E    G L D I I      + +         I K + + + YLH      ++ RD 
Sbjct: 113 LVMECYKGGELFDEI-IHRMKFNEVDAA------VIIKQVLSGVTYLH---KHNIVHRDL 162

Query: 190 KLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           K  N+L     ++ + K+ DF  S      + +   
Sbjct: 163 KPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 46.0 bits (110), Expect = 5e-06
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 11/98 (11%)

Query: 123 LETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
           + T     +V EY++ G L D I  +H    + E        ++ + I +A+ Y H    
Sbjct: 80  ISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEME------ARRLFQQILSAVDYCH---R 129

Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
             V+ RD K  N+L +    AK+ DF  S  + +GE L
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H C  K+           +V E +  G L D++ + +    +    L          +  
Sbjct: 199 HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKV-VGNKRLKEATCKLYF------YQMLL 250

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           A+ YLH      +I RD K  N+L     E+ + K+ DF  S  + E  L+  L
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 12/90 (13%)

Query: 130 LVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
           L  E   C  SL           P  E  +        +D   A+A+LH    + ++  D
Sbjct: 134 LQTEL--CGPSLQQHCEAWGASLP--EAQVW----GYLRDTLLALAHLH---SQGLVHLD 182

Query: 189 FKLSNILFNEENVAKLFDFSFSISIPEGEL 218
            K +NI        KL DF   + +     
Sbjct: 183 VKPANIFLGPRGRCKLGDFGLLVELGTAGA 212

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 21/117 (17%)

Query: 96  MYDCCINNIV--YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ 153
           M        V  Y +       F+      E  + I   E ++        ++    Q  
Sbjct: 60  MRTVDCPFTVTFYGA------LFR------EGDVWI-CMELMDTSLDKFYKQVIDKGQTI 106

Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            E +L     KIA  I  A+ +LH      VI RD K SN+L N     K+ DF  S
Sbjct: 107 PEDILG----KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGIS 157

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +VFE +N G + +       P  + +           +D+   I YLH    + +I RD 
Sbjct: 115 MVFELVNQGPVMEVP--TLKPLSEDQAR------FYFQDLIKGIEYLHY---QKIIHRDI 163

Query: 190 KLSNILFNEENVAKLFDFSFS-ISIPEGELL 219
           K SN+L  E+   K+ DF  S        LL
Sbjct: 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALL 194

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 18/97 (18%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           LV E +N G L +RI+ + +          +      I + + +A++++H      V+ R
Sbjct: 83  LVMELLNGGELFERIKKKKH---------FSETEASYIMRKLVSAVSHMH---DVGVVHR 130

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISI-PEGELLT 220
           D K  N+LF   N+    K+ DF F+    P+ + L 
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 45.8 bits (109), Expect = 8e-06
 Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 13/153 (8%)

Query: 60  YDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFK 117
            DS   I + S   +     +   R ++V   D  K +  +   N +V      H    +
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106

Query: 118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLH 177
           +    L  +   ++ E++  G+L D +         +E  + T    + + +  A+AYLH
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVS----QVRLNEEQIAT----VCEAVLQALAYLH 158

Query: 178 VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
               + VI RD K  +IL   +   KL DF F 
Sbjct: 159 ---AQGVIHRDIKSDSILLTLDGRVKLSDFGFC 188

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 45.8 bits (109), Expect = 8e-06
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           ++ E+   G++   +      +   EP +      + + +  A+ +LH    + +I RD 
Sbjct: 93  IMIEFCPGGAVDAIML--ELDRGLTEPQIQV----VCRQMLEALNFLH---SKRIIHRDL 143

Query: 190 KLSNILFNEENVAKLFDFSFS 210
           K  N+L   E   +L DF  S
Sbjct: 144 KAGNVLMTLEGDIRLADFGVS 164

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 17/132 (12%), Positives = 29/132 (21%), Gaps = 27/132 (20%)

Query: 124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLH-VGFPR 182
                ++V E+I  GSL +                    ++  + +A A    H  G   
Sbjct: 102 TRAGGLVVAEWIRGGSLQEVAD---------TSPSPVGAIRAMQSLAAAADAAHRAG--- 149

Query: 183 PVIFRDFKLSNILFNEENVAKLFDFS-----------FSISIPEGELLTGLRAFDLARLN 231
            V       S +  + +    L   +             I      LL            
Sbjct: 150 -VALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRGIGASLYALLVNRWPLP--EAG 206

Query: 232 EDDGYVALRDHV 243
              G        
Sbjct: 207 VRSGLAPAERDT 218

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 28/119 (23%), Positives = 38/119 (31%), Gaps = 24/119 (20%)

Query: 96  MYDCCINNIV--YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLAD--RIRIQHNPQ 151
           M       IV  Y +       F+      E    I   E ++  S     +        
Sbjct: 75  MRSSDCPYIVQFYGA------LFR------EGDCWI-CMELMS-TSFDKFYKYVYSVLDD 120

Query: 152 PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
              E +L     KI      A+ +L       +I RD K SNIL +     KL DF  S
Sbjct: 121 VIPEEILG----KITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 13/96 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +V E    G L D I I+     +H+        +I K + + I Y+H      ++ RD 
Sbjct: 98  IVGELYTGGELFDEI-IKRKRFSEHDAA------RIIKQVFSGITYMH---KHNIVHRDL 147

Query: 190 KLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           K  NIL     ++   K+ DF  S    +   +   
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 130 LVFEYINC--GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR 187
           LVFE+++       D   + + P+     L+          +   +A+ H      ++ R
Sbjct: 80  LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY----FQWQLLQGLAFCH---ENKILHR 132

Query: 188 DFKLSNILFNEENVAKLFDF 207
           D K  N+L N+    KL DF
Sbjct: 133 DLKPQNLLINKRGQLKLGDF 152

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 17/98 (17%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           +V E    G L D I  +            +     +I K + + I Y+H      ++ R
Sbjct: 98  IVGELYTGGELFDEIIKRKR---------FSEHDAARIIKQVFSGITYMHK---HNIVHR 145

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           D K  NIL     ++   K+ DF  S    +   +   
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 14/99 (14%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL--KIAKDIANAIAYLHVGFPRPVIFR 187
           +VFE+++   L   I      +      + +  +     + I  A+ Y H      +I R
Sbjct: 103 MVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHR 154

Query: 188 DFKLSNILF-NEENVA--KLFDFSFSISIPE-GELLTGL 222
           D K   +L  ++EN A  KL  F  +I + E G +  G 
Sbjct: 155 DVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR 193

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 38/176 (21%), Positives = 61/176 (34%), Gaps = 41/176 (23%)

Query: 54  EIATNNYDSEKVIMKRSFYTLYKGFCQERL---ISVMKFDASKPRMYDCCINNIVYASQM 110
           E +T    + K I KR   +  +G  +E +   +S++K +   P        N++     
Sbjct: 32  EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK-EIQHP--------NVI----- 77

Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKD 168
                  L          IL+ E +  G L D +  +           LT     +  K 
Sbjct: 78  ------TLHEVYENKTDVILILELVAGGELFDFL-AEKES--------LTEEEATEFLKQ 122

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA----KLFDFSFSISIPEGELLT 220
           I N + YLH      +   D K  NI+  + NV     K+ DF  +  I  G    
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 11/98 (11%)

Query: 123 LETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
           + T   I +V EY++ G L D I  ++    + E        ++ + I + + Y H    
Sbjct: 85  ISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESR------RLFQQILSGVDYCH---R 134

Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
             V+ RD K  N+L +    AK+ DF  S  + +GE L
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 8/77 (10%)

Query: 133 EYINCGSLADRIRIQH-NPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKL 191
           EY N GSLAD I   +       E  L      +   +   + Y+H      ++  D K 
Sbjct: 91  EYCNGGSLADAISENYRIMSYFKEAEL----KDLLLQVGRGLRYIH---SMSLVHMDIKP 143

Query: 192 SNILFNEENVAKLFDFS 208
           SNI  +  ++       
Sbjct: 144 SNIFISRTSIPNAASEE 160

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 17/98 (17%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           LVF+ +  G L + I  +            +        + I  +IAY H      ++ R
Sbjct: 82  LVFDLVTGGELFEDIVAREF---------YSEADASHCIQQILESIAYCH---SNGIVHR 129

Query: 188 DFKLSNILF--NEENVA-KLFDFSFSISIPEGELLTGL 222
           + K  N+L     +  A KL DF  +I + + E   G 
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 17/96 (17%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           LV E    G L +R+  +                  +I KD+ +A+AY H      V  R
Sbjct: 83  LVMELCTGGELFERVVHKRV---------FRESDAARIMKDVLSAVAYCHK---LNVAHR 130

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISIPEGELLT 220
           D K  N LF   + ++  KL DF  +     G+++ 
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 19/98 (19%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           +V E +  G L D+I  Q            + R    +   I   + YLH    + V+ R
Sbjct: 93  VVTELMKGGELLDKILRQKF---------FSEREASAVLFTITKTVEYLH---AQGVVHR 140

Query: 188 DFKLSNILF--NEENVA--KLFDFSFSISI-PEGELLT 220
           D K SNIL+     N    ++ DF F+  +  E  LL 
Sbjct: 141 DLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 17/101 (16%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +  E  N  +L D +  ++      +     + + + + IA+ +A+LH      +I RD 
Sbjct: 86  IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDL 141

Query: 190 KLSNILFNEENV-------------AKLFDFSFSISIPEGE 217
           K  NIL +  +                + DF     +  G+
Sbjct: 142 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 50/207 (24%)

Query: 84  ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
           ++  K     P+  +     +    ++ H    +L     + Q   LV E  + G L D+
Sbjct: 59  MNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDK 118

Query: 144 IRIQHNPQPQHEPLLLTHRL---------------------------------KIAKDIA 170
           + +  +       + +                                      I + I 
Sbjct: 119 LNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILF--NEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
           +A+ YLH    + +  RD K  N LF  N+    KL DF  S    +            A
Sbjct: 179 SALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA 235

Query: 229 RLNEDDG---YVA---LRDHVKKYFEE 249
                 G   +VA   L    + Y  +
Sbjct: 236 ------GTPYFVAPEVLNTTNESYGPK 256

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 17/98 (17%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           LVF+ +  G L + I +             +        + I  +IAY H      ++ R
Sbjct: 105 LVFDLVTGGELFEDI-VAREF--------YSEADASHCIQQILESIAYCH---SNGIVHR 152

Query: 188 DFKLSNILF--NEENVA-KLFDFSFSISIPEGELLTGL 222
           + K  N+L     +  A KL DF  +I + + E   G 
Sbjct: 153 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 41/178 (23%)

Query: 54  EIATNNYDSEKVIMKRSFYTLYKGFCQERL---ISVMKFDASKPRMYDCCINNIVYASQM 110
           E +T    + K I KR      +G  +E +   +S+++              N++     
Sbjct: 33  EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR-QVLHH--------NVI----- 78

Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKD 168
                  L          +L+ E ++ G L D +  + +         L+        K 
Sbjct: 79  ------TLHDVYENRTDVVLILELVSGGELFDFLAQKES---------LSEEEATSFIKQ 123

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA----KLFDFSFSISIPEGELLTGL 222
           I + + YLH    + +   D K  NI+  ++N+     KL DF  +  I +G     +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 41/178 (23%)

Query: 54  EIATNNYDSEKVIMKRSFYTLYKGFCQERL---ISVMKFDASKPRMYDCCINNIVYASQM 110
           +  T    + K I KR   +  +G  +E +   +++++ +   P        NI+     
Sbjct: 26  QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR-EIRHP--------NII----- 71

Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKD 168
                  L          +L+ E ++ G L D +  +           LT     +  K 
Sbjct: 72  ------TLHDIFENKTDVVLILELVSGGELFDFL-AEKES--------LTEDEATQFLKQ 116

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILF----NEENVAKLFDFSFSISIPEGELLTGL 222
           I + + YLH    + +   D K  NI+           KL DF  +  I  G     +
Sbjct: 117 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 171

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 12/94 (12%)

Query: 129 ILVFEY-INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR 187
           +LV E  +    L D I  +  P  +        R      +  AI + H    R V+ R
Sbjct: 114 MLVLERPLPAQDLFDYI-TEKGPLGEGPS-----R-CFFGQVVAAIQHCH---SRGVVHR 163

Query: 188 DFKLSNILFNEE-NVAKLFDFSFSISIPEGELLT 220
           D K  NIL +     AKL DF     + +     
Sbjct: 164 DIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD 197

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
           + +A+ YL     + +I RD K  NI+  E+   KL DF  +  +  G+L 
Sbjct: 139 LVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF 186

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 37/157 (23%), Positives = 60/157 (38%), Gaps = 17/157 (10%)

Query: 60  YDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINN-IVYASQMIHRC 114
           +   + I   SF  +Y        +   I  M +   +       I   + +  ++ H  
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 115 FFKLIGCCLETQIPILVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
             +  GC L      LV EY  C GS +D + +  + +P  E  +      +       +
Sbjct: 116 TIQYRGCYLREHTAWLVMEY--CLGSASDLLEV--HKKPLQEVEIAA----VTHGALQGL 167

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
           AYLH      +I RD K  NIL +E  + KL DF  +
Sbjct: 168 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA 201

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 15/96 (15%)

Query: 129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIF 186
           +LV EY++ G L DRI          E   LT    +   K I   I ++H      ++ 
Sbjct: 162 VLVMEYVDGGELFDRI--------IDESYNLTELDTILFMKQICEGIRHMH---QMYILH 210

Query: 187 RDFKLSNILF--NEENVAKLFDFSFSISIPEGELLT 220
            D K  NIL    +    K+ DF  +      E L 
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 43.7 bits (103), Expect = 5e-05
 Identities = 16/96 (16%), Positives = 42/96 (43%), Gaps = 15/96 (15%)

Query: 129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIF 186
           ++++E+++ G L +++  +HN         ++    ++  + +   + ++H       + 
Sbjct: 230 VMIYEFMSGGELFEKVADEHN--------KMSEDEAVEYMRQVCKGLCHMH---ENNYVH 278

Query: 187 RDFKLSNILF--NEENVAKLFDFSFSISIPEGELLT 220
            D K  NI+F     N  KL DF  +  +   + + 
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 15/96 (15%)

Query: 129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIF 186
           +L+ E+++ G L DRI          E   ++    +   +     + ++H      ++ 
Sbjct: 124 VLILEFLSGGELFDRI--------AAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVH 172

Query: 187 RDFKLSNILF--NEENVAKLFDFSFSISIPEGELLT 220
            D K  NI+    + +  K+ DF  +  +   E++ 
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 36/178 (20%), Positives = 65/178 (36%), Gaps = 41/178 (23%)

Query: 54  EIATNNYDSEKVIMKRSFYTLYKGFCQERL---ISVMKFDASKPRMYDCCINNIVYASQM 110
           E +T    + K I KR      +G C+E +   +S+++     P        NI+     
Sbjct: 33  EKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR-QVLHP--------NII----- 78

Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKD 168
                  L          +L+ E ++ G L D +  + +         L+        K 
Sbjct: 79  ------TLHDVYENRTDVVLILELVSGGELFDFLAQKES---------LSEEEATSFIKQ 123

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA----KLFDFSFSISIPEGELLTGL 222
           I + + YLH    + +   D K  NI+  ++N+     KL DF  +  I +G     +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 12/98 (12%)

Query: 123 LETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
           + T   I +V EY   G L D I ++     + E        +  + I  AI Y H    
Sbjct: 78  ITTPTDIVMVIEYAG-GELFDYI-VEKKRMTEDE------GRRFFQQIICAIEYCH---R 126

Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
             ++ RD K  N+L ++    K+ DF  S  + +G  L
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL 164

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 13/96 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           +V E +  G L D++ + +    +    L          +  A+ YLH      +I RD 
Sbjct: 91  IVLELMEGGELFDKV-VGNKRLKEATCKLYF------YQMLLAVQYLHE---NGIIHRDL 140

Query: 190 KLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           K  N+L     E+ + K+ DF  S  + E  L+  L
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 17/98 (17%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           LV E +  G L DRI ++            + R      K I  A+AYLH      ++ R
Sbjct: 125 LVLELVTGGELFDRI-VEKGY--------YSERDAADAVKQILEAVAYLH---ENGIVHR 172

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
           D K  N+L+     +   K+ DF  S  +    L+  +
Sbjct: 173 DLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV 210

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 42.8 bits (101), Expect = 8e-05
 Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 30/171 (17%)

Query: 49  SAKELEIATNNYDSEKVIMKRSFYTLYKGFCQE--RLISV--MKFDASKPR----MYDCC 100
              E     +    +  + + SF  +++   ++     +V  ++ +  +           
Sbjct: 49  VDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLS 108

Query: 101 INNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLT 160
              IV            L G   E     +  E +  GSL   I+ Q    P  E   L 
Sbjct: 109 SPRIV-----------PLYGAVREGPWVNIFMELLEGGSLGQLIK-QMGCLP--EDRALY 154

Query: 161 HRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-NVAKLFDFSFS 210
                       + YLH    R ++  D K  N+L + + + A L DF  +
Sbjct: 155 ----YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA 198

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 14/95 (14%)

Query: 129 ILVFEYIN-CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR 187
           +L+ E       L D I  +     +        R      +  A+ + H      V+ R
Sbjct: 124 VLILERPEPVQDLFDFI-TERGALQEELA-----R-SFFWQVLEAVRHCH---NCGVLHR 173

Query: 188 DFKLSNILFNEE--NVAKLFDFSFSISIPEGELLT 220
           D K  NIL +     + KL DF     + +     
Sbjct: 174 DIKDENILIDLNRGEL-KLIDFGSGALLKDTVYTD 207

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 24/108 (22%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LVF++       D   +  N         L+   ++ + + N + Y+H      ++ RD 
Sbjct: 101 LVFDFCEH----DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDM 150

Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGL-RAFDLARLNEDDGY 236
           K +N+L   + V KL DF             GL RAF LA+ ++ + Y
Sbjct: 151 KAANVLITRDGVLKLADF-------------GLARAFSLAKNSQPNRY 185

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 15/99 (15%)

Query: 129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIF 186
           IL+ EY   G +     +    +      +++    +++ K I   + YLH      ++ 
Sbjct: 105 ILILEYAAGGEIFSLC-LPELAE------MVSENDVIRLIKQILEGVYYLH---QNNIVH 154

Query: 187 RDFKLSNILF---NEENVAKLFDFSFSISIPEGELLTGL 222
            D K  NIL          K+ DF  S  I     L  +
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI 193

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 15/96 (15%)

Query: 129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIF 186
           +++FE+I+   + +RI      +       L  R  +     +  A+ +LH      +  
Sbjct: 77  VMIFEFISGLDIFERI-NTSAFE-------LNEREIVSYVHQVCEALQFLH---SHNIGH 125

Query: 187 RDFKLSNILF--NEENVAKLFDFSFSISIPEGELLT 220
            D +  NI++     +  K+ +F  +  +  G+   
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 17/96 (17%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL--KIAKDIANAIAYLHVGFPRPVIFR 187
           LV + ++ G L DRI  +            T +    + + + +A+ YLH      ++ R
Sbjct: 83  LVMQLVSGGELFDRILERGV---------YTEKDASLVIQQVLSAVKYLH---ENGIVHR 130

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISIPEGELLT 220
           D K  N+L+    E +   + DF  S     G + T
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
           +  A+ YL     + +I RD K  NIL +E     + DF+ +  +P    +T
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 11/79 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
            V EY N G L   +          E +    R +    +I +A+ YLH    + V++RD
Sbjct: 225 FVMEYANGGELFFHL--------SRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRD 274

Query: 189 FKLSNILFNEENVAKLFDF 207
            KL N++ +++   K+ DF
Sbjct: 275 LKLENLMLDKDGHIKITDF 293

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 18/91 (19%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
           +V E ++ G L  RI+              T R   +I K I  AI YLH      +  R
Sbjct: 92  IVMECLDGGELFSRIQ-------DRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHR 141

Query: 188 DFKLSNILF---NEENVAKLFDFSFSISIPE 215
           D K  N+L+       + KL DF F+    E
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFA---KE 169

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 39.4 bits (93), Expect = 8e-04
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 10/78 (12%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LVFE+ +     D  +   +       L           +   + + H    R V+ RD 
Sbjct: 78  LVFEFCDQ----DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDL 127

Query: 190 KLSNILFNEENVAKLFDF 207
           K  N+L N     KL +F
Sbjct: 128 KPQNLLINRNGELKLANF 145

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 39.5 bits (93), Expect = 9e-04
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 12/87 (13%)

Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
           LVFE+++  ++ D + +  N            ++       N I + H      +I RD 
Sbjct: 101 LVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQI------INGIGFCHS---HNIIHRDI 150

Query: 190 KLSNILFNEENVAKLFDFSFS--ISIP 214
           K  NIL ++  V KL DF F+  ++ P
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTLAAP 177

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	309
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.98
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.93
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.93
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.88
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.81
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.56
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.41
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.38
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	99.08
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.92
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.85
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.8
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.79
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.72
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.65
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.5
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.47
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.22
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.16
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.13
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.85
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.83
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.76
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.74
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.71
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.71
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.6
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.55
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.32
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.05
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.93
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.23
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	93.99
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	93.78
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	92.66
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	90.11
1cja_A	342	Protein (actin-fragmin kinase); transferase; HET:	84.39

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2e-51  Score=357.19  Aligned_cols=246  Identities=19%  Similarity=0.266  Sum_probs=198.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++|...+.||+|+||+||+|.+       ++..||||+++.......++|.+|+.+|++++|||||+++|+|.+++..+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            5677888999999999999987       367899999988776677889999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhC------CCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          131 VFEYINCGSLADRIRIQH------NPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~------~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                      |||||++|+|.++|..++      ........++|.+++.|+.|||.||+|||   +++||||||||+|||+++++++||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence            999999999999996432      11224567999999999999999999999   899999999999999999999999


Q ss_pred             eecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cc------cccccccccccCCCC
Q 045682          205 FDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEIIDPLIMGDRS  265 (309)
Q Consensus       205 ~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~~~  265 (309)
                      +|||+|+......      ...|+..|.+|+...      ..+.|+++..+|+++. +.      +..+++..+..|..+
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~  249 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL  249 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            9999998765433      223555566666433      2356777777777764 32      223455566666654


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .. |..+++++.+|+.+||+.||++||||.+|.+.|+++.++
T Consensus       250 ~~-p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          250 QR-PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             CC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CC-CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            43 346788999999999999999999999999999998765

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.1e-50  Score=357.22  Aligned_cols=246  Identities=18%  Similarity=0.229  Sum_probs=193.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .+|...+.||+|+||+||+|.+       ++..||||+++.......++|.+|+.+|++++|||||+++|+|.+++..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            4567778899999999999986       368899999987776677889999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCC--------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          131 VFEYINCGSLADRIRIQHNP--------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      ||||+++|+|.++|..+...        .....+++|.+++.|+.|||.||+|||   +.+||||||||+||||++++++
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence            99999999999998643211        112457999999999999999999999   8999999999999999999999


Q ss_pred             EEeecccccccCCCc------cccccccccccccccC------CCcccHHHHHHHHhh-cc------cccccccccccCC
Q 045682          203 KLFDFSFSISIPEGE------LLTGLRAFDLARLNED------DGYVALRDHVKKYFE-ED------RLNEIIDPLIMGD  263 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~  263 (309)
                      ||+|||+|+......      ...|...|.+|+....      .+.|+++..+|+++. +.      ...++++.+..|.
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~  277 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR  277 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            999999998764432      2345666777765432      345667777777764 22      2234555555565


Q ss_pred             CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          264 RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       264 ~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+.. +..+++++.+|+.+||+.||++||||.||++.|+.+.++
T Consensus       278 ~~~~-p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          278 ELER-PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             CCCC-CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CCCC-cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            4433 346788999999999999999999999999999998764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.2e-50  Score=349.72  Aligned_cols=242  Identities=15%  Similarity=0.203  Sum_probs=192.2

Q ss_pred             CCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++...+.||+|+||+||+|.+       +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            355577899999999999997       35789999997653 3445789999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc
Q 045682          131 VFEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV  201 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~  201 (309)
                      |||||++|+|.++|......         ......++|.+++.|+.|||.||+|||   +.+||||||||+||||+++++
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence            99999999999999633210         112356999999999999999999999   899999999999999999999


Q ss_pred             EEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cc------cccccccccccC
Q 045682          202 AKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEIIDPLIMG  262 (309)
Q Consensus       202 ~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g  262 (309)
                      +||+|||+|+......      ...|...|.+|+...      ..+.|+++..+|+++. +.      ...+++..+..|
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~  263 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR  263 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999998664322      234555666666432      3356777777777764 32      223455555556


Q ss_pred             CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          263 DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       263 ~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      ..++. +..++.++.+|+.+||+.||++||||.+|++.|+.+
T Consensus       264 ~~~~~-p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          264 QVLPC-PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             CCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCC-cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            55443 347889999999999999999999999999999864

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-49  Score=346.55  Aligned_cols=245  Identities=20%  Similarity=0.244  Sum_probs=192.5

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      |+...+++...+.||+|+||+||+|++.+ .||||.++...  ....+.|.+|+.++++++|||||+++|++.+ +..+|
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i  108 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI  108 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence            34456778888999999999999999865 48999986543  3455789999999999999999999999865 56899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |||||++|+|.++|.      .....++|.+++.|+.|||.||+|||   +.+||||||||+||||++++++||+|||+|
T Consensus       109 VmEy~~gGsL~~~l~------~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  179 (307)
T 3omv_A          109 VTQWCEGSSLYKHLH------VQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA  179 (307)
T ss_dssp             EEECCSSCBHHHHHH------TSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred             EEEcCCCCCHHHHHh------hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCc
Confidence            999999999999986      13467999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCC------cccccccccccccccc---------CCCcccHHHHHHHHhhccccc-------ccccccccCCCCC--
Q 045682          211 ISIPEG------ELLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSC--  266 (309)
Q Consensus       211 ~~~~~~------~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~--  266 (309)
                      +.....      ....|...|.+|+...         ..+.|+++..+|+++.+....       .+......+...+  
T Consensus       180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~  259 (307)
T 3omv_A          180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL  259 (307)
T ss_dssp             BC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCS
T ss_pred             eecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCc
Confidence            875432      2346788888887542         235666777777776554321       1112222232221  


Q ss_pred             -CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          267 -SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       267 -~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                       ..+..++.++.+|+.+||+.||++||||.+|++.|+.|..++
T Consensus       260 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence             123467789999999999999999999999999999887654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=6.4e-49  Score=348.69  Aligned_cols=257  Identities=18%  Similarity=0.273  Sum_probs=201.6

Q ss_pred             cccHHHHHHHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCCc-hhHHHHHHHHHHHhhcc-CCccee
Q 045682           47 TFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASKP-RMYDCCINNIVYASQMI-HRCFFK  117 (309)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~  117 (309)
                      ++..++|+...++|+..+.||+|+||+||+|.+.       ++.||||.+..... ...+.|.+|+.+|.++. |||||+
T Consensus        53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            3566788888899999999999999999999972       26799999977543 34567999999999995 599999


Q ss_pred             eeeeeeeC-CceEEEEEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeC
Q 045682          118 LIGCCLET-QIPILVFEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR  187 (309)
Q Consensus       118 l~g~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~  187 (309)
                      ++|+|.++ +..+||||||++|+|.++|+.....         ......+++..++.++.|||.||.|||   +++||||
T Consensus       133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHR  209 (353)
T 4ase_A          133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR  209 (353)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred             EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecC
Confidence            99999764 5689999999999999999643211         112456999999999999999999999   9999999


Q ss_pred             CCCCCCeeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-ccc-c-
Q 045682          188 DFKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR-L-  252 (309)
Q Consensus       188 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~-~-  252 (309)
                      ||||+|||+++++++||+|||+|+....+.      ...|+..|.+|+...      ..+.|+++..+|+++. +.. + 
T Consensus       210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~  289 (353)
T 4ase_A          210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  289 (353)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence            999999999999999999999998764432      233555566666432      3356777777777764 221 1 


Q ss_pred             ----cc-cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          253 ----NE-IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       253 ----~~-~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                          .+ +...+..|..+ ..|..+++++.+|+.+||+.||++||||.+|++.|+++.++
T Consensus       290 ~~~~~~~~~~~i~~g~~~-~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          290 GVKIDEEFCRRLKEGTRM-RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             TCCCSHHHHHHHHHTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCC-CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence                12 22233334433 33446788999999999999999999999999999998865

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=5.4e-48  Score=337.25  Aligned_cols=240  Identities=17%  Similarity=0.181  Sum_probs=182.8

Q ss_pred             CCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC----ceEEEEEe
Q 045682           59 NYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ----IPILVFEY  134 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~----~~~lv~e~  134 (309)
                      +|...+.||+|+||+||+|+++|+.||||++..... ....+..|+..+.+++|||||+++|+|.+++    ..+|||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            466778999999999999999999999999965431 1122344666667889999999999998754    57999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG-----FPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +++|+|.++|.        ...++|..+.+++.|+|.||+|||+.     ...+||||||||+||||+.++++||+|||+
T Consensus        83 ~~~gsL~~~l~--------~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl  154 (303)
T 3hmm_A           83 HEHGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             CTTCBHHHHHH--------HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             CCCCcHHHHHH--------hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence            99999999996        34699999999999999999999932     123999999999999999999999999999


Q ss_pred             ccccCCCc--------ccccccccccccccc------------CCCcccHHHHHHHHhhccccc----------------
Q 045682          210 SISIPEGE--------LLTGLRAFDLARLNE------------DDGYVALRDHVKKYFEEDRLN----------------  253 (309)
Q Consensus       210 a~~~~~~~--------~~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~----------------  253 (309)
                      |+......        ...|+..|.+|+...            ..+.|+++..+|+++.+....                
T Consensus       155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~  234 (303)
T 3hmm_A          155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred             CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence            98764332        235777888887543            235677777777776543211                


Q ss_pred             -----ccccccccCCCCCCc-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          254 -----EIIDPLIMGDRSCSG-----KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       254 -----~~~~~~~~g~~~~~~-----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                           ++......+...+..     ...++..+.+|+.+||+.||++||||.||++.|+++.++
T Consensus       235 ~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence                 111111112211111     124667899999999999999999999999999998764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.9e-48  Score=343.58  Aligned_cols=233  Identities=17%  Similarity=0.194  Sum_probs=187.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+..+.||+|+||+||+|++  +++.||||++....  ....+.+.+|+.+|++++|||||++++++.+++..|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5788999999999999999998  78999999997643  3455779999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      ||++|+|.++|...     ....+++..++.|+.||+.||.|||   +++||||||||+||||+.+|.+||+|||+|+..
T Consensus       104 y~~gg~L~~~i~~~-----~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  175 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ-----KGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL  175 (350)
T ss_dssp             CCTTCBHHHHHHHT-----TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred             CCCCCcHHHHHHHc-----CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceee
Confidence            99999999998622     3456899999999999999999999   999999999999999999999999999999987


Q ss_pred             CCCc----cccccccccccccccCCC------cccHHHHHHHHhhc------ccccccccccccCCCCCCchHHHHHHHH
Q 045682          214 PEGE----LLTGLRAFDLARLNEDDG------YVALRDHVKKYFEE------DRLNEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ....    ...|...|.+|+...+..      .|+++..+++++.+      .+..+++..+..+..+... ...+.++.
T Consensus       176 ~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~-~~~s~~~~  254 (350)
T 4b9d_A          176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS-LHYSYDLR  254 (350)
T ss_dssp             CHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCC-TTSCHHHH
T ss_pred             cCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCC-ccCCHHHH
Confidence            6542    345888888888655432      34444444444333      3444556666666665433 36678899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +|+.+||+.||++|||+.|+++
T Consensus       255 ~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          255 SLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999999975

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=7.5e-48  Score=339.30  Aligned_cols=231  Identities=18%  Similarity=0.213  Sum_probs=188.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ..|+..+.||+|+||+||+|++  +|+.||||++........+.+.+|+.+|++++|||||++++++.+++..|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            5688889999999999999999  78999999997665555567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++.        ...+++..+..++.||+.||+|||   +++||||||||+||||+.+|.+||+|||+|+....
T Consensus       154 ~gg~L~~~l~--------~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  222 (346)
T 4fih_A          154 EGGALTDIVT--------HTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  222 (346)
T ss_dssp             TTEEHHHHHH--------HSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             CCCcHHHHHH--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence            9999999986        346999999999999999999999   99999999999999999999999999999987644


Q ss_pred             C----ccccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCC-CCchHHHHHHHHH
Q 045682          216 G----ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRS-CSGKEQQLQAYAH  278 (309)
Q Consensus       216 ~----~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~-~~~~~~~~~~l~~  278 (309)
                      .    ....|...|.+|+.....      +.|+++..+++++.+.      ...+++..+..+..+ .......++++.+
T Consensus       223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~d  302 (346)
T 4fih_A          223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG  302 (346)
T ss_dssp             SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHH
T ss_pred             CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHH
Confidence            3    245688888888765433      3444555555554433      222333333333221 2233466788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      |+.+||+.||++|||+.|+++
T Consensus       303 li~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          303 FLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=9.2e-48  Score=337.76  Aligned_cols=235  Identities=15%  Similarity=0.151  Sum_probs=188.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +.|...+.||+|+||.||+|++  +|+.||||+++....     ..+|+.+++.++|||||++++++.+++..||||||+
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            4567778899999999999998  789999999976532     247999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeecccccccC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSISIP  214 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~  214 (309)
                      ++|+|.++|.       ..+.+++..+..++.||+.||.|||   +++||||||||+||||+.+| .+||+|||+|+...
T Consensus       133 ~gg~L~~~l~-------~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~  202 (336)
T 4g3f_A          133 EGGSLGQLIK-------QMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ  202 (336)
T ss_dssp             TTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred             CCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence            9999999997       4567999999999999999999999   99999999999999999988 59999999998765


Q ss_pred             CCc---------cccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCC-CchHHH
Q 045682          215 EGE---------LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSC-SGKEQQ  272 (309)
Q Consensus       215 ~~~---------~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~-~~~~~~  272 (309)
                      .+.         ...|...|.+|+...+.      +.|+++..+++++.+.      ...+++..+..+..+. ..+..+
T Consensus       203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  282 (336)
T 4g3f_A          203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC  282 (336)
T ss_dssp             -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTS
T ss_pred             CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccC
Confidence            432         24588888888865543      3455555555554443      2233333444443322 123366


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ++++.+|+.+||+.||.+|||+.||++.|......
T Consensus       283 s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          283 APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence            78899999999999999999999999998887654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.7e-47  Score=329.24  Aligned_cols=229  Identities=16%  Similarity=0.223  Sum_probs=181.4

Q ss_pred             CccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeee----CCceEEEE
Q 045682           61 DSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE----TQIPILVF  132 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv~  132 (309)
                      ...+.||+|+||+||+|.+  ++..||+|.+...  .....+.|.+|+.+|++++|||||++++++.+    ++..+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4456799999999999999  7899999998654  33445679999999999999999999999865    34589999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeCCCCCCCeeec-CCCcEEEeeccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP--VIFRDFKLSNILFN-EENVAKLFDFSF  209 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--iiH~dlkp~Nill~-~~~~~kl~Dfg~  209 (309)
                      |||++|+|.+++.       ....+++..+..++.||+.||+|||   +++  ||||||||+||||+ .++.+||+|||+
T Consensus       109 Ey~~gg~L~~~l~-------~~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGl  178 (290)
T 3fpq_A          109 ELMTSGTLKTYLK-------RFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             ECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTG
T ss_pred             eCCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcC
Confidence            9999999999997       4567999999999999999999999   777  99999999999997 479999999999


Q ss_pred             ccccCCCc--cccccccccccccccC-----CCcccHHHHHHHHhhcccc-------cccccccccCCCCCCchHHHHHH
Q 045682          210 SISIPEGE--LLTGLRAFDLARLNED-----DGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       210 a~~~~~~~--~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      |+......  ...|...|.+|+....     .+.|+++..+++++.+...       ..+...+..+..+...+...+++
T Consensus       179 a~~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  258 (290)
T 3fpq_A          179 ATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE  258 (290)
T ss_dssp             GGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred             CEeCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHH
Confidence            98654432  4568888888886542     1334445455555443321       22333444444444444455678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||+.||++|||+.|+++
T Consensus       259 ~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          259 VKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.2e-47  Score=327.14  Aligned_cols=229  Identities=19%  Similarity=0.257  Sum_probs=177.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||+||+|.+  +++.||+|.+....   ......+.+|+.+|++++|||||++++++.+++..|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6799999999999999999998  78999999987542   234567999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+ +|+|.+++.       ....+++..+..++.||+.||+|||   +++|+||||||+|||++.++++||+|||+|+.
T Consensus        93 Ey~-~g~L~~~l~-------~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~  161 (275)
T 3hyh_A           93 EYA-GNELFDYIV-------QRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI  161 (275)
T ss_dssp             ECC-CEEHHHHHH-------HSCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred             eCC-CCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCee
Confidence            999 579999986       4567999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc---cccccccccccccccCCCcccHHHHHHHH-------hh------cccccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNEDDGYVALRDHVKKY-------FE------EDRLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      .....   ...|+..|.+|+...+..+.....++|++       +.      +.+..+++..+..+..+.+  ...++++
T Consensus       162 ~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p--~~~s~~~  239 (275)
T 3hyh_A          162 MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP--KFLSPGA  239 (275)
T ss_dssp             -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--TTSCHHH
T ss_pred             cCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHH
Confidence            65433   45688888888876554444444555544       33      2333444455555544332  3567889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||++|||+.|+++
T Consensus       240 ~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          240 AGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHc
Confidence            99999999999999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=9.4e-47  Score=340.18  Aligned_cols=231  Identities=18%  Similarity=0.213  Sum_probs=188.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +.|+..+.||+|+||.||+|.+  +|+.||||++........+.+.+|+.+|+.++|||||++++++.+++..|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            5688899999999999999999  78999999998766566677999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++.        ...+++.++..|+.||+.||+|||   +++||||||||+||||+.+|.+||+|||+|+....
T Consensus       231 ~gG~L~~~i~--------~~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~  299 (423)
T 4fie_A          231 EGGALTDIVT--------HTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  299 (423)
T ss_dssp             TTEEHHHHHH--------HSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred             CCCcHHHHHh--------ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence            9999999985        346999999999999999999999   99999999999999999999999999999987644


Q ss_pred             C----ccccccccccccccccCC------CcccHHHHHHHHhhccc------ccccccccccCCCC-CCchHHHHHHHHH
Q 045682          216 G----ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDR------LNEIIDPLIMGDRS-CSGKEQQLQAYAH  278 (309)
Q Consensus       216 ~----~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~-~~~~~~~~~~l~~  278 (309)
                      .    ....|...|.+|+.....      +.|+++..+++++.+..      ..+++..+..+..+ .......+.++.+
T Consensus       300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~d  379 (423)
T 4fie_A          300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG  379 (423)
T ss_dssp             SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHH
T ss_pred             CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHH
Confidence            3    245688888888765433      34555555555544432      22333333322221 1222356688999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      |+.+||+.||++|||+.|+++
T Consensus       380 li~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          380 FLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.9e-47  Score=332.00  Aligned_cols=229  Identities=18%  Similarity=0.198  Sum_probs=189.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||+||+|++  +++.||||.+...   .....+.+.+|+++|++++|||||++++++.+++..||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5699999999999999999998  7899999998653   2234577999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ..+.+++..+..++.||+.||.|||   +++||||||||+|||++.++.+||+|||+|+.
T Consensus       112 Ey~~gG~L~~~i~-------~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~  181 (311)
T 4aw0_A          112 SYAKNGELLKYIR-------KIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV  181 (311)
T ss_dssp             CCCTTEEHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ecCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCcee
Confidence            9999999999997       4567999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCC------ccccccccccccccccCCC------cccHHHHHHHHhh------cccccccccccccCCCCCCchHHHHH
Q 045682          213 IPEG------ELLTGLRAFDLARLNEDDG------YVALRDHVKKYFE------EDRLNEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       213 ~~~~------~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      ....      ...+|...|.+|+...+..      .|+++..++.++.      +.+..+++..+..+....+  ...++
T Consensus       182 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p--~~~s~  259 (311)
T 4aw0_A          182 LSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP--EKFFP  259 (311)
T ss_dssp             CCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--TTCCH
T ss_pred             cCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--cccCH
Confidence            6432      2456888888888654432      3333333444433      3344455566666655433  35678


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      ++.+|+.+||+.||++|||+.|+.
T Consensus       260 ~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          260 KARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHHHHHccCCHhHCcChHHHc
Confidence            899999999999999999999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.5e-45  Score=320.71  Aligned_cols=234  Identities=14%  Similarity=0.192  Sum_probs=172.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc-------
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI-------  127 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-------  127 (309)
                      ++|+..+.||+|+||+||+|++  +++.||||++.... ....+.+.+|+.+|++++|||||++++++.+.+.       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4588899999999999999998  78999999987654 3344679999999999999999999999876442       


Q ss_pred             -----eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          128 -----PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       128 -----~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                           .|+|||||++|+|.+++...    ......++..++.++.||+.||+|||   +++||||||||+|||++.++.+
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~----~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~v  157 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGR----CTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVV  157 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTC----CSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCE
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhc----CCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcE
Confidence                 68999999999999998621    12233566778899999999999999   9999999999999999999999


Q ss_pred             EEeecccccccCCCc----------------cccccccccccccccCC------CcccHHHHHHHHhhccc----ccccc
Q 045682          203 KLFDFSFSISIPEGE----------------LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDR----LNEII  256 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~----------------~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~----~~~~~  256 (309)
                      ||+|||+|+....+.                ...|+..|.+|+...+.      +.|+++..+++++....    ....+
T Consensus       158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~~~  237 (299)
T 4g31_A          158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTL  237 (299)
T ss_dssp             EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHH
T ss_pred             EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHHHH
Confidence            999999998765432                23588888888765432      34555555555542111    11122


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .....+..++ .....++.+.+|+.+||+.||++|||+.|+++
T Consensus       238 ~~~~~~~~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          238 TDVRNLKFPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHTTCCCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCCCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            2222333332 22345566789999999999999999999975

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3e-46  Score=324.26  Aligned_cols=225  Identities=16%  Similarity=0.158  Sum_probs=176.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++|+..+.||+|+||+||+|+.     +++.||||.+....  ......+.+|+.+|++++|||||++++++.+++..|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            5689999999999999999987     45789999987642  2233468899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++.       ....+++..+..++.||+.||+|||   +++||||||||+|||++.+|.+||+|||+|
T Consensus       104 vmEy~~gg~L~~~l~-------~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla  173 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLS-------KEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS  173 (304)
T ss_dssp             EECCCTTCEEHHHHH-------HHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEE
T ss_pred             EEEcCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccc
Confidence            999999999999997       4567999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCC----ccccccccccccccccCC------CcccHHHHHHHHhhc------ccccccccccccCCCCCCchHHHHH
Q 045682          211 ISIPEG----ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEE------DRLNEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       211 ~~~~~~----~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      +.....    ....|+..|.+|+.....      +.|+++..+++++.+      .+..+++..+..+..+.  +...++
T Consensus       174 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~--p~~~s~  251 (304)
T 3ubd_A          174 KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM--PQFLSP  251 (304)
T ss_dssp             EC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTSCH
T ss_pred             eeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC--CCcCCH
Confidence            865332    245688888888765433      344555555555443      33344555555555433  235678


Q ss_pred             HHHHHHHHcccCCCCCCCCH
Q 045682          275 AYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~  294 (309)
                      ++.+|+.+||+.||++|||+
T Consensus       252 ~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          252 EAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             HHHHHHHHHTCSSGGGSTTC
T ss_pred             HHHHHHHHHcccCHHHCCCC
Confidence            89999999999999999995

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.9e-43  Score=316.59  Aligned_cols=231  Identities=15%  Similarity=0.161  Sum_probs=177.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee------CCc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE------TQI  127 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~------~~~  127 (309)
                      ++|+..+.||+|+||+||+|++  +|+.||||++....  ....+.+.+|+.+|+.++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5688899999999999999998  79999999997643  3345678999999999999999999998764      357


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .||||||++ |+|.+++.       ....+++..+..++.||+.||.|||   +.+||||||||+|||++.++.+||+||
T Consensus       134 ~~ivmE~~~-g~L~~~i~-------~~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DF  202 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIH-------SSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDF  202 (398)
T ss_dssp             EEEEEECCS-EEHHHHHT-------SSSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCC
T ss_pred             EEEEEeCCC-CCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeec
Confidence            899999996 68999986       5678999999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCC--------ccccccccccccccccCCCc-------ccHHHHHHHHhhccccc------cccccccc--CCC
Q 045682          208 SFSISIPEG--------ELLTGLRAFDLARLNEDDGY-------VALRDHVKKYFEEDRLN------EIIDPLIM--GDR  264 (309)
Q Consensus       208 g~a~~~~~~--------~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~~~~--g~~  264 (309)
                      |+|+.....        ....|...|.+|+...+..+       |+++..+++++.+....      +.+..+..  |..
T Consensus       203 Gla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p  282 (398)
T 4b99_A          203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP  282 (398)
T ss_dssp             TTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             ceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            999876332        24568888888886544333       44444444444333211      11111100  000


Q ss_pred             -----------------------CCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 -----------------------SCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 -----------------------~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                             .....    ...+.++.+|+.+||+.||++|||+.|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                   00000    123567899999999999999999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.1e-42  Score=305.50  Aligned_cols=145  Identities=17%  Similarity=0.226  Sum_probs=130.9

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCce
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  128 (309)
                      ...+.|+..+.||+|+||+||+|+.     +++.||+|.+....  ...++.+|+++|..+ +||||+++++++.+++..
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            3567899999999999999999986     36889999987653  345688999999998 799999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-CcEEEeec
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-NVAKLFDF  207 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Df  207 (309)
                      ++||||+++|+|.+++.          .+++.++..++.||+.||+|||   +.+||||||||+|||++.+ +.+||+||
T Consensus        96 ~lvmE~~~g~~L~~~~~----------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DF  162 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN----------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDF  162 (361)
T ss_dssp             EEEEECCCCCCHHHHHT----------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             EEEEeCCCcccHHHHHc----------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcC
Confidence            99999999999999974          4899999999999999999999   9999999999999999877 89999999


Q ss_pred             ccccccC
Q 045682          208 SFSISIP  214 (309)
Q Consensus       208 g~a~~~~  214 (309)
                      |+|+...
T Consensus       163 Gla~~~~  169 (361)
T 4f9c_A          163 GLAQGTH  169 (361)
T ss_dssp             TTCEECT
T ss_pred             CCCcccC
Confidence            9997654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.1e-41  Score=319.07  Aligned_cols=233  Identities=14%  Similarity=0.190  Sum_probs=190.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ++|+..+.||+|+||.||+|.+  +|+.||+|.+........+.+.+|+.+|+.++|||||++++++.+++..+||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            6789999999999999999999  78999999998776666678999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC--CcEEEeeccccccc
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE--NVAKLFDFSFSISI  213 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~a~~~  213 (309)
                      ++|+|.++|.      .....+++.++..++.||+.||.|||   +++|+||||||+|||++.+  +.+||+|||+|+..
T Consensus       237 ~gg~L~~~i~------~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          237 SGGELFEKVA------DEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             CCCBHHHHHT------CTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred             CCCcHHHHHH------HhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence            9999999985      23467999999999999999999999   9999999999999999854  89999999999987


Q ss_pred             CCCc---cccccccccccccccCCC------cccHHHHHHHHhhcc------cccccccccccCCCCCC--chHHHHHHH
Q 045682          214 PEGE---LLTGLRAFDLARLNEDDG------YVALRDHVKKYFEED------RLNEIIDPLIMGDRSCS--GKEQQLQAY  276 (309)
Q Consensus       214 ~~~~---~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~--~~~~~~~~l  276 (309)
                      ....   ..+|...|.+|+...+..      .|+++..++.++.+.      ...+.+..+..+.....  .....+.++
T Consensus       308 ~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  387 (573)
T 3uto_A          308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG  387 (573)
T ss_dssp             CTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHH
T ss_pred             cCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            6554   446888888877655433      233444444444333      22344444444444332  223567889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||.+|||+.|+++
T Consensus       388 ~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          388 KDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999999999975

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=9.7e-41  Score=294.00  Aligned_cols=256  Identities=24%  Similarity=0.315  Sum_probs=200.9

Q ss_pred             ccccHHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee
Q 045682           46 CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE  124 (309)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  124 (309)
                      ..+++.++...+++|...+.||+|+||.||+|.+ +++.||+|++........+.+.+|+.+++.++||||+++++++..
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  106 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE  106 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            3456666777889999999999999999999999 789999999887766677889999999999999999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEE
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL  204 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl  204 (309)
                      ++..++||||+++|+|.+++....   .....+++..++.++.|++.||.|||   +.+++||||||+||+++.++.+||
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl  180 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSD---LPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKI  180 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSC---CCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEE
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccC---CCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEE
Confidence            999999999999999999985221   12346999999999999999999999   899999999999999999999999


Q ss_pred             eecccccccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhhcccccc------c-----------
Q 045682          205 FDFSFSISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE------I-----------  255 (309)
Q Consensus       205 ~Dfg~a~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~-----------  255 (309)
                      +|||++.......      ...|...|.+|+..      ...+.|+++..++.++.+.....      .           
T Consensus       181 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~  260 (321)
T 2qkw_B          181 TDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH  260 (321)
T ss_dssp             CCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHH
T ss_pred             eecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcc
Confidence            9999997653221      22355555555532      22355666666676665432110      0           


Q ss_pred             ----ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          256 ----IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       256 ----~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                          +............+...+..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             TTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             ccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence                0111111112223457889999999999999999999999999999988753

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.1e-40  Score=292.28  Aligned_cols=242  Identities=17%  Similarity=0.209  Sum_probs=190.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ++|...+.||+|+||+||+|.+  ++..||+|.+........+.+.+|+.++.+++||||+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            5688899999999999999999  68999999997776677788999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++..      ....+++..++.++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus        90 ~~~~L~~~l~~------~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  160 (310)
T 3s95_A           90 KGGTLRGIIKS------MDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD  160 (310)
T ss_dssp             TTCBHHHHHHH------CCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred             CCCcHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence            99999999862      2467999999999999999999999   89999999999999999999999999999987643


Q ss_pred             Cc------------------ccccccccccccccc------CCCcccHHHHHHHHhhcccccccccccccC-------CC
Q 045682          216 GE------------------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEIIDPLIMG-------DR  264 (309)
Q Consensus       216 ~~------------------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~  264 (309)
                      ..                  ...|...|.+|+...      ..+.|+++..++.++.+.....-.......       ..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~  240 (310)
T 3s95_A          161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL  240 (310)
T ss_dssp             -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH
T ss_pred             ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc
Confidence            32                  234555666665432      234556666666665443221110000000       00


Q ss_pred             CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          265 SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       265 ~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ....+..++.++.+|+.+||+.||++|||+.++++.|+.+...+
T Consensus       241 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          241 DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             HHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence            00001234467999999999999999999999999999998764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.2e-39  Score=283.34  Aligned_cols=257  Identities=24%  Similarity=0.332  Sum_probs=202.6

Q ss_pred             CCcccccHHHHHHHhcCCCcc------CceeecCCeEEEEEEeCCeEEEEEEecCCC----chhHHHHHHHHHHHhhccC
Q 045682           43 NPYCTFSAKELEIATNNYDSE------KVIMKRSFYTLYKGFCQERLISVMKFDASK----PRMYDCCINNIVYASQMIH  112 (309)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h  112 (309)
                      .+...|++.++..++++|+..      +.||+|+||.||+|.+++..||+|.+....    ....+.+.+|+.++.+++|
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            345779999999999999887      889999999999999999999999986532    3345779999999999999


Q ss_pred             CcceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCC
Q 045682          113 RCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLS  192 (309)
Q Consensus       113 ~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~  192 (309)
                      |||+++++++.+.+..++||||+++|+|.+++....    ....+++..++.++.|++.||.|||   +.+++|+||||+
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~  162 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD----GTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSA  162 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG----GCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGG
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc----CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHH
Confidence            999999999999999999999999999999986321    2456999999999999999999999   899999999999


Q ss_pred             CeeecCCCcEEEeecccccccCCCc------ccccccccccccccc-----CCCcccHHHHHHHHhhccccccc------
Q 045682          193 NILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE-----DDGYVALRDHVKKYFEEDRLNEI------  255 (309)
Q Consensus       193 Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------  255 (309)
                      ||+++.++.+||+|||++.......      ...|...|.+|+...     ..+.|+++..++.++.+.....-      
T Consensus       163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  242 (307)
T 2nru_A          163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL  242 (307)
T ss_dssp             GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB
T ss_pred             HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHH
Confidence            9999999999999999987654321      234555565555322     23556666666666554322110      


Q ss_pred             c--------------cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          256 I--------------DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       256 ~--------------~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +              ........ ...+...+..+.+++.+||+.||.+|||+.+|++.|+++..|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s  307 (307)
T 2nru_A          243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS  307 (307)
T ss_dssp             TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred             HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence            0              00011111 122347788899999999999999999999999999998754

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=2.6e-40  Score=291.77  Aligned_cols=256  Identities=23%  Similarity=0.386  Sum_probs=199.9

Q ss_pred             CCCcccccHHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeee
Q 045682           42 YNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLI  119 (309)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~  119 (309)
                      ......|++.++....++|...+.||+|+||.||+|.+ +++.||||++..... .....+.+|+.++..++||||++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   93 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR   93 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred             cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence            34466799999999999999999999999999999998 789999999876532 2234689999999999999999999


Q ss_pred             eeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC---CeEeCCCCCCCeee
Q 045682          120 GCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR---PVIFRDFKLSNILF  196 (309)
Q Consensus       120 g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~---~iiH~dlkp~Nill  196 (309)
                      +++...+..++||||+++|+|.+++....   .....+++..+..++.|++.||.|||   +.   +|+||||||+|||+
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~  167 (326)
T 3uim_A           94 GFCMTPTERLLVYPYMANGSVASCLRERP---ESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILL  167 (326)
T ss_dssp             EEECCSSCCEEEEECCTTCBHHHHHHCCS---TTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEE
T ss_pred             EEEecCCceEEEEEeccCCCHHHHHHhcc---ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEE
Confidence            99999999999999999999999986321   23456999999999999999999999   67   99999999999999


Q ss_pred             cCCCcEEEeecccccccCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhhcccccc-----------
Q 045682          197 NEENVAKLFDFSFSISIPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE-----------  254 (309)
Q Consensus       197 ~~~~~~kl~Dfg~a~~~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----------  254 (309)
                      +.++.+||+|||++.......     ...|...|.+|+...      ..+.|+++..++.++.+.....           
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  247 (326)
T 3uim_A          168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM  247 (326)
T ss_dssp             CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSB
T ss_pred             CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchh
Confidence            999999999999998764322     223555555555322      2345566666666655433221           


Q ss_pred             ------------cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          255 ------------IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       255 ------------~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                                  .+............+...+..+.+++.+||+.||.+|||+.+|++.|+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             HHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence                        0111111122223345778899999999999999999999999999974

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=8.6e-41  Score=292.96  Aligned_cols=253  Identities=17%  Similarity=0.236  Sum_probs=187.8

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeC
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLET  125 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  125 (309)
                      +...++....++|...+.||+|+||.||+|.+++..||||.+....  ....+.+.+|+.++.+++||||+++++++.+.
T Consensus        27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  106 (309)
T 3p86_A           27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP  106 (309)
T ss_dssp             -----CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             CCcccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            3344444556788999999999999999999999999999987654  33446799999999999999999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeCCCCCCCeeecCCCcEE
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP--VIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--iiH~dlkp~Nill~~~~~~k  203 (309)
                      +..++||||+++|+|.+++...    .....+++..++.++.|++.||+|||   +.+  |+||||||+|||++.++.+|
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~k  179 (309)
T 3p86_A          107 PNLSIVTEYLSRGSLYRLLHKS----GAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVK  179 (309)
T ss_dssp             TCCEEEEECCTTCBHHHHHHST----THHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEE
T ss_pred             CceEEEEecCCCCcHHHHHhhc----CCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEE
Confidence            9999999999999999998611    01123999999999999999999999   888  99999999999999999999


Q ss_pred             EeecccccccCCC----cccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCC
Q 045682          204 LFDFSFSISIPEG----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCS  267 (309)
Q Consensus       204 l~Dfg~a~~~~~~----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~  267 (309)
                      |+|||+++.....    ....|...|.+|+...      ..+.|+++..++.++.+....      +.............
T Consensus       180 L~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~  259 (309)
T 3p86_A          180 VCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE  259 (309)
T ss_dssp             ECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC
T ss_pred             ECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence            9999999765433    2344555565555432      335667777777776543321      11221111222222


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+...+.++.+|+.+||+.||.+|||+.+|++.|+.+.++
T Consensus       260 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          260 IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            2335668899999999999999999999999999998765

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=7.3e-41  Score=315.17  Aligned_cols=229  Identities=14%  Similarity=0.156  Sum_probs=180.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHH---HHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCI---NNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~---~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++|+..++||+|+||.||+|+.  +|+.||||.+....   ......+.   .++.+++.++|||||++++++.+.+..|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            6789999999999999999999  88999999986431   11222233   3466777789999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      |||||++||+|.++|.       ..+.+++..+..++.||+.||.|||   +.+||||||||+||||+.+|.+||+|||+
T Consensus       269 lVmEy~~GGdL~~~l~-------~~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGl  338 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLS-------QHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL  338 (689)
T ss_dssp             EEECCCCSCBHHHHHH-------HHCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEecCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccce
Confidence            9999999999999997       4567999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCc--cccccccccccccccCC-------CcccHHHHHHHHhhccccc---------ccccccccCCCCCCchHH
Q 045682          210 SISIPEGE--LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLN---------EIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~--~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~  271 (309)
                      |+......  ..+|...|.+|+.....       +.|+++..+++++.+....         ++......+....  +..
T Consensus       339 A~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~--p~~  416 (689)
T 3v5w_A          339 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL--PDS  416 (689)
T ss_dssp             CEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCC--CTT
T ss_pred             eeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC--Ccc
Confidence            98775543  46799999988865432       3344555555554443221         1222223333222  235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCC-----HHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPT-----MVDVA  298 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt-----~~~l~  298 (309)
                      .++++.+|+..||+.||.+|++     +.+|.
T Consensus       417 ~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            6788999999999999999998     56664

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=4e-40  Score=290.31  Aligned_cols=241  Identities=18%  Similarity=0.215  Sum_probs=187.8

Q ss_pred             HhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc----eEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI----PILV  131 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~----~~lv  131 (309)
                      ..++|...+.||+|+||.||+|.+.++.||||++.... .....+..|+.++.+++||||+++++++.....    .++|
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEECCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            34678999999999999999999999999999986553 333456679999999999999999999987543    6999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC----------CeEeCCCCCCCeeecCCCc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR----------PVIFRDFKLSNILFNEENV  201 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~----------~iiH~dlkp~Nill~~~~~  201 (309)
                      |||+++|+|.+++.        ...+++..++.++.|++.||.|||   +.          +|+||||||+|||++.++.
T Consensus       101 ~e~~~~g~L~~~l~--------~~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~  169 (322)
T 3soc_A          101 TAFHEKGSLSDFLK--------ANVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLT  169 (322)
T ss_dssp             EECCTTCBHHHHHH--------HCCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCC
T ss_pred             EecCCCCCHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCe
Confidence            99999999999986        245999999999999999999999   88          9999999999999999999


Q ss_pred             EEEeecccccccCCCc------cccccccccccccccC-----------CCcccHHHHHHHHhhccccc-----------
Q 045682          202 AKLFDFSFSISIPEGE------LLTGLRAFDLARLNED-----------DGYVALRDHVKKYFEEDRLN-----------  253 (309)
Q Consensus       202 ~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-----------  253 (309)
                      +||+|||+++......      ...|...|.+|+....           .+.|+++..+++++.+....           
T Consensus       170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~  249 (322)
T 3soc_A          170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF  249 (322)
T ss_dssp             EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTT
T ss_pred             EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccch
Confidence            9999999997654332      2346666766665432           15566666666666542211           


Q ss_pred             -----------ccccccccCCCCCC-----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          254 -----------EIIDPLIMGDRSCS-----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       254 -----------~~~~~~~~g~~~~~-----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                                 .+.+....+...+.     .....+.++.+|+.+||+.||++|||+.+|++.|+++.+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~  320 (322)
T 3soc_A          250 EEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT  320 (322)
T ss_dssp             HHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             hhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence                       01111111111111     11245677999999999999999999999999999998753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.7e-40  Score=292.05  Aligned_cols=231  Identities=19%  Similarity=0.268  Sum_probs=186.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|++...  .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            46799999999999999999998  8899999998654  3345567899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        94 e~~~~~~L~~~l~-------~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  163 (328)
T 3fe3_A           94 EYASGGEVFDYLV-------AHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNE  163 (328)
T ss_dssp             CCCTTCBHHHHHH-------HHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGG
T ss_pred             ECCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCcee
Confidence            9999999999986       3467999999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCc---cccccccccccccccCCC-------cccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNEDDG-------YVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      .....   ...|...|.+|+...+..       .|+++..++.++.+.      ...++...+..+....+  ...+.++
T Consensus       164 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~  241 (328)
T 3fe3_A          164 FTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMSTDC  241 (328)
T ss_dssp             GSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHH
T ss_pred             cCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCHHH
Confidence            65433   345677777776544333       344444444444332      22333444444443322  2456789


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||.+|||+.++++
T Consensus       242 ~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          242 ENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHCCCChhHCcCHHHHhc
Confidence            99999999999999999999974

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.5e-39  Score=299.20  Aligned_cols=242  Identities=18%  Similarity=0.250  Sum_probs=190.9

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-ceEEEEE
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-IPILVFE  133 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e  133 (309)
                      ...++|...+.||+|+||.||+|.++++.||||.++...  ..+.|.+|+.++++++||||+++++++.... ..++|||
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            345678888999999999999999999999999997653  4578999999999999999999999987755 7899999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++|+|.+++...     ....+++..++.++.||+.||+|||   +.+++||||||+|||++.++.+||+|||+++..
T Consensus       268 ~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          268 YMAKGSLVDYLRSR-----GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             CCTTCBHHHHHHHH-----CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ecCCCcHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence            99999999999733     2345799999999999999999999   899999999999999999999999999999865


Q ss_pred             CCCc-ccccccccccccccc------CCCcccHHHHHHHHhh-cc------cccccccccccCCCCCCchHHHHHHHHHH
Q 045682          214 PEGE-LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       214 ~~~~-~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      .... ...+...|.+|+...      ..+.|+++..+|+++. +.      ...++...+..|... ..+..++.++.+|
T Consensus       340 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-~~p~~~~~~l~~l  418 (450)
T 1k9a_A          340 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-DAPDGCPPAVYDV  418 (450)
T ss_dssp             C------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC-CCCTTCCHHHHHH
T ss_pred             cccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCcCCHHHHHH
Confidence            4322 122333444444322      2355666666677664 32      222333344444332 2334677899999


Q ss_pred             HHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          280 IFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      |.+||+.||++|||+.+|++.|+.+...
T Consensus       419 i~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          419 MKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.5e-39  Score=291.96  Aligned_cols=247  Identities=16%  Similarity=0.256  Sum_probs=191.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe---------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeC
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC---------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLET  125 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~---------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~  125 (309)
                      .++|...+.||+|+||.||+|.+         ++..||+|.+.... ......+.+|+.+++.+ +||||+++++++..+
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            46688889999999999999986         23579999997653 33456799999999999 899999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF  196 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill  196 (309)
                      +..++||||+++|+|.+++......         ......+++..++.++.||+.||.|||   +.+|+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence            9999999999999999999743211         112346899999999999999999999   8999999999999999


Q ss_pred             cCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cc------ccccccc
Q 045682          197 NEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEIID  257 (309)
Q Consensus       197 ~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~  257 (309)
                      +.++.+||+|||+++......      ...+...|.+|+...      ..+.|+++..+++++. +.      ...+++.
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~  316 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  316 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            999999999999998664332      122333455555322      2345666666666654 32      2223333


Q ss_pred             ccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          258 PLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       258 ~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ....+..+ ..+..++.++.+|+..||+.||.+|||+.+|++.|+.+..-
T Consensus       317 ~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~  365 (370)
T 2psq_A          317 LLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  365 (370)
T ss_dssp             HHHTTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhcCCCC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            33333322 22336678899999999999999999999999999998764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=2.4e-40  Score=287.92  Aligned_cols=242  Identities=19%  Similarity=0.242  Sum_probs=184.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~  129 (309)
                      ++|...+.||+|+||.||+|++      +++.||||++........+.+.+|+.++.+++||||+++++++..  ....+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5688889999999999999984      679999999987776667889999999999999999999999865  35689


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        90 lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~  160 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQK------HKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGL  160 (295)
T ss_dssp             EEEECCTTCBHHHHHHH------CGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred             EEEEeCCCCCHHHHHHh------cccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcc
Confidence            99999999999999862      2345999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc-------ccccccccccccccc------CCCcccHHHHHHHHhhccccc----------------------c
Q 045682          210 SISIPEGE-------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN----------------------E  254 (309)
Q Consensus       210 a~~~~~~~-------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----------------------~  254 (309)
                      +.......       ...+...|.+|+...      ..+.|+++..++.++.+....                      .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T 3ugc_A          161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH  240 (295)
T ss_dssp             CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence            98764432       111222244444321      234555666666655432110                      1


Q ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 045682          255 IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSCA  309 (309)
Q Consensus       255 ~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~~  309 (309)
                      +......+.. .+.+..++.++.+|+..||+.||++|||+.+|++.|+.+.+.++
T Consensus       241 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~  294 (295)
T 3ugc_A          241 LIELLKNNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA  294 (295)
T ss_dssp             HHHHHHTTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             HHHHHhccCc-CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence            1111112222 22234667889999999999999999999999999999988753

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=5.3e-40  Score=295.69  Aligned_cols=248  Identities=19%  Similarity=0.266  Sum_probs=193.4

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      .+.+....++|...+.||+|+||.||+|.+  +++.||||.+.... ......|.+|+.++++++||||++++|++..++
T Consensus       106 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  185 (377)
T 3cbl_A          106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ  185 (377)
T ss_dssp             CCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             ccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC
Confidence            344455567788899999999999999999  68999999987653 233456889999999999999999999999999


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++||||+++|+|.+++..      ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|
T Consensus       186 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~D  256 (377)
T 3cbl_A          186 PIYIVMELVQGGDFLTFLRT------EGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISD  256 (377)
T ss_dssp             SCEEEEECCTTCBHHHHHHH------HGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             CcEEEEEcCCCCCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECc
Confidence            99999999999999999862      2346899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCccc------ccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCC
Q 045682          207 FSFSISIPEGELL------TGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCS  267 (309)
Q Consensus       207 fg~a~~~~~~~~~------~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~  267 (309)
                      ||+++........      .+...+.+|+...      ..+.|+++..+|+++. +...      .++......+... +
T Consensus       257 fG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~  335 (377)
T 3cbl_A          257 FGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL-P  335 (377)
T ss_dssp             GGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCC-C
T ss_pred             CCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-C
Confidence            9999875443211      1222344444322      2356666667776664 3221      1222222233322 2


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+..++.++.+|+.+||+.||++|||+.+|++.|+++.+.
T Consensus       336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            2335678899999999999999999999999999999764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=286.73  Aligned_cols=240  Identities=17%  Similarity=0.253  Sum_probs=186.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--C---CeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--Q---ERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...+.||+|+||.||+|.+  +   +..||||.+... .....+.+.+|+.++..++||||+++++++.+++..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            5577789999999999999998  2   356999999775 334456799999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++.      .....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus       129 ~e~~~~~~L~~~l~------~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  199 (325)
T 3kul_A          129 TEYMENGSLDTFLR------THDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSR  199 (325)
T ss_dssp             EECCTTCBHHHHHH------TTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             eeCCCCCcHHHHHH------hcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence            99999999999986      13457999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCc----cc---ccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          212 SIPEGE----LL---TGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       212 ~~~~~~----~~---~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      ......    ..   .+...|.+|+...      ..+.|+++..++.++. +...      .++......+... +.+..
T Consensus       200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~  278 (325)
T 3kul_A          200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL-PAPMG  278 (325)
T ss_dssp             ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC-CCCTT
T ss_pred             ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCC-CCCCC
Confidence            764432    11   1122244444322      2355666666666554 2211      2233333333222 22336


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ++..+.+|+..||+.||.+|||+.+|++.|+.+.++
T Consensus       279 ~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            678899999999999999999999999999999865

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.5e-39  Score=282.14  Aligned_cols=232  Identities=17%  Similarity=0.233  Sum_probs=185.3

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|...+.||+|+||+||+|.+  +++.||+|.+........+.+.+|+.++..++||||+++++++..++..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46799999999999999999997  7899999998766555567899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++|+|.+++.        ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        99 ~~~~~L~~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (297)
T 3fxz_A           99 LAGGSLTDVVT--------ETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (297)
T ss_dssp             CTTCBHHHHHH--------HSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCCCHHHHHh--------hcCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            99999999986        346899999999999999999999   8999999999999999999999999999988765


Q ss_pred             CCc----ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------ccccc-ccCCCCCCchHHHHHHHH
Q 045682          215 EGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPL-IMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~g~~~~~~~~~~~~~l~  277 (309)
                      ...    ...|...|.+|+...      ..+.|+++..++.++.+.....      ..... ..+......+...+..+.
T Consensus       168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (297)
T 3fxz_A          168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR  247 (297)
T ss_dssp             STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHH
T ss_pred             CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHH
Confidence            432    334566666665432      2245566666666655432211      11111 112222233446678899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +|+.+||+.||++|||+.++++
T Consensus       248 ~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          248 DFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHccCChhHCcCHHHHhh
Confidence            9999999999999999999975

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.1e-39  Score=291.51  Aligned_cols=260  Identities=16%  Similarity=0.237  Sum_probs=195.2

Q ss_pred             ccccHHHHHHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcce
Q 045682           46 CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFF  116 (309)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv  116 (309)
                      ..+...+++...++|...+.||+|+||.||+|.+       +++.||||++.... ....+.+.+|+.++.++ +||||+
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv   89 (359)
T 3vhe_A           10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   89 (359)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence            3467778888889999999999999999999984       45889999997754 33446799999999999 899999


Q ss_pred             eeeeeeeeCC-ceEEEEEeccCCChhhhhhhhCCCC--------------------------------------------
Q 045682          117 KLIGCCLETQ-IPILVFEYINCGSLADRIRIQHNPQ--------------------------------------------  151 (309)
Q Consensus       117 ~l~g~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------  151 (309)
                      ++++++.+.+ ..++||||+++|+|.+++.......                                            
T Consensus        90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (359)
T 3vhe_A           90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE  169 (359)
T ss_dssp             CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred             eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence            9999998755 4899999999999999986432100                                            


Q ss_pred             ---------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          152 ---------------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       152 ---------------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                                     .....+++..++.++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++......
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  246 (359)
T 3vhe_A          170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD  246 (359)
T ss_dssp             --------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred             ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence                           00223899999999999999999999   899999999999999999999999999999865332


Q ss_pred             c------ccccccccccccccc------CCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHHHH
Q 045682          217 E------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       217 ~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      .      ...|...|.+|+...      ..+.|+++..++.++. +....      +.+............+...+.++.
T Consensus       247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  326 (359)
T 3vhe_A          247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY  326 (359)
T ss_dssp             TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHH
T ss_pred             ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHH
Confidence            2      222333455554322      2345555656666553 32211      111111111112222235567899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      +++..||+.||.+|||+.+|++.|+++.++.
T Consensus       327 ~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          327 QTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999998764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.2e-39  Score=277.15  Aligned_cols=240  Identities=20%  Similarity=0.274  Sum_probs=188.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .++|...+.||+|+||.||+|.+ ++..||+|++..... ..+.+.+|+.++.+++||||+++++++.+++..++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            35688889999999999999999 889999999976542 3467999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++.      .....+++..++.++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus        88 ~~~~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           88 EHGCLSDYLR------TQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  158 (269)
T ss_dssp             TTCBHHHHHH------TTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             CCCcHHHHHH------hcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence            9999999986      13456999999999999999999999   89999999999999999999999999999986644


Q ss_pred             Cc-----ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHH
Q 045682          216 GE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       216 ~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ..     ...+...+.+|+...      ..+.|+++..++.++. +...      .++......+... ..+...+..+.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  237 (269)
T 4hcu_A          159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL-YKPRLASTHVY  237 (269)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-CCCTTSCHHHH
T ss_pred             cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccC-CCCCcCCHHHH
Confidence            32     122223344444322      2245555555565554 2211      1222222222222 22234567899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +++..||+.||++|||+.++++.|+++.++
T Consensus       238 ~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          238 QIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            999999999999999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-39  Score=289.86  Aligned_cols=247  Identities=18%  Similarity=0.211  Sum_probs=190.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .++|...+.||+|+||.||+|.+       ++..||||++.... ......+.+|+.++.+++||||+++++++..++..
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            46688889999999999999995       45789999997653 34456789999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC---cEEEe
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN---VAKLF  205 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~---~~kl~  205 (309)
                      ++||||+++|+|.+++............+++..++.++.||+.||.|||   +.+|+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence            9999999999999999765443344567999999999999999999999   89999999999999998554   59999


Q ss_pred             ecccccccCC------Ccccccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCC
Q 045682          206 DFSFSISIPE------GELLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSC  266 (309)
Q Consensus       206 Dfg~a~~~~~------~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~  266 (309)
                      |||+++....      .....|...|.+|+...      ..+.|+++..+++++. +..      ..++...+..+....
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~  306 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD  306 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999975421      12233344455554321      2355666666666664 321      122333333333222


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                       .+..++..+.+|+.+||+.||.+|||+.+|++.|+.+...
T Consensus       307 -~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          307 -PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence             2235667899999999999999999999999999988653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=4.6e-40  Score=303.04  Aligned_cols=249  Identities=18%  Similarity=0.256  Sum_probs=195.3

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      +..++++...++|...+.||+|+||.||+|.+ ++..||||.+.... ...+.|.+|+.++++++||||+++++++. .+
T Consensus       178 ~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~  255 (454)
T 1qcf_A          178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KE  255 (454)
T ss_dssp             CCTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             ccccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence            44556667778899999999999999999999 68899999997654 34678999999999999999999999987 56


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++||||+++|+|.+++...     ....+++..++.++.||+.||+|||   +.+|+||||||+|||++.++.+||+|
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~D  327 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSD-----EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIAD  327 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSH-----HHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECS
T ss_pred             ccEEEEeecCCCcHHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEee
Confidence            789999999999999998622     2246889999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCcc-----cccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCc
Q 045682          207 FSFSISIPEGEL-----LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSG  268 (309)
Q Consensus       207 fg~a~~~~~~~~-----~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~  268 (309)
                      ||+++.......     ..+...+.+|+...      ..+.|+++..+|+++. +..      ..+++..+..+.... .
T Consensus       328 FG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-~  406 (454)
T 1qcf_A          328 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP-R  406 (454)
T ss_dssp             TTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC-C
T ss_pred             CCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-C
Confidence            999987654321     12223344444322      2355666666666664 322      123333333343322 2


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +..++.++.+|+.+||+.||++|||+.+|++.|+++..+
T Consensus       407 ~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          407 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            346678899999999999999999999999999987654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=3.3e-39  Score=290.01  Aligned_cols=241  Identities=17%  Similarity=0.246  Sum_probs=178.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .++|+..+.||+|+||.||+|.+     ++..||||.+.... ....+.|.+|+.++.+++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            35788899999999999999987     35779999997653 3445679999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++..      ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       124 v~e~~~~~sL~~~l~~------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  194 (373)
T 2qol_A          124 VTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLG  194 (373)
T ss_dssp             EEECCTTCBHHHHHHT------TTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             EEeCCCCCcHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccc
Confidence            9999999999999861      3457999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCcc-------cccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchH
Q 045682          211 ISIPEGEL-------LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       211 ~~~~~~~~-------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~  270 (309)
                      +.......       ..+...|.+|+...      ..+.|+++..+++++. +...      .++...+..+... +.+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~-~~~~  273 (373)
T 2qol_A          195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-PPPM  273 (373)
T ss_dssp             -------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC-CCCT
T ss_pred             cccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCc
Confidence            87644321       11122344444322      2345666666666543 2211      1222222222111 1223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .++.++.+|+.+||+.||.+|||+.+|++.|+.+...
T Consensus       274 ~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            5668899999999999999999999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.1e-38  Score=279.23  Aligned_cols=243  Identities=18%  Similarity=0.206  Sum_probs=191.3

Q ss_pred             ccccHHHHHHHhcC----------CCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC
Q 045682           46 CTFSAKELEIATNN----------YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHR  113 (309)
Q Consensus        46 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~  113 (309)
                      ..|+++++..++..          |+..+.||+|+||.||+|.+  +++.||||.+........+.+.+|+.++..++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            35788888777754          56667899999999999998  7899999999877666677899999999999999


Q ss_pred             cceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       114 niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      ||+++++++...+..++||||+++|+|.+++.        ...+++..+..++.|++.||.|||   +.+|+||||||+|
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--------~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~N  171 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS--------QVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDS  171 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT--------TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGG
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHH
Confidence            99999999999999999999999999999985        356999999999999999999999   8999999999999


Q ss_pred             eeecCCCcEEEeecccccccCCC----ccccccccccccccccC------CCcccHHHHHHHHhhccccc------cccc
Q 045682          194 ILFNEENVAKLFDFSFSISIPEG----ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLN------EIID  257 (309)
Q Consensus       194 ill~~~~~~kl~Dfg~a~~~~~~----~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~  257 (309)
                      ||++.++.+||+|||++......    ....|...|.+|+....      .+.|+++..++.++.+....      +.+.
T Consensus       172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~  251 (321)
T 2c30_A          172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK  251 (321)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred             EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999999999998876443    23346666666654322      34556666666665543221      1112


Q ss_pred             ccccCCCC-CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 PLIMGDRS-CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 ~~~~g~~~-~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ....+..+ .......+.++.+++.+||+.||++|||+.++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          252 RLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            22222111 1122345678999999999999999999999975

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=7e-39  Score=274.79  Aligned_cols=240  Identities=15%  Similarity=0.147  Sum_probs=189.3

Q ss_pred             cCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  133 (309)
                      ++|...+.||+|+||.||+|.+++..||+|.+....  ....+.+.+|+.++.+++||||+++++++.+.  +..++|||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH   89 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence            568889999999999999999999999999987653  34456799999999999999999999999876  78899999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP--VIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |+++|+|.+++..     .....+++..++.++.|++.||.|||   +.+  ++|+||||+||+++.++.++|+|||++.
T Consensus        90 ~~~~~~L~~~l~~-----~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~  161 (271)
T 3kmu_A           90 WMPYGSLYNVLHE-----GTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKF  161 (271)
T ss_dssp             CCTTCBHHHHHHS-----CSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred             ccCCCcHHHHHhh-----cccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEecccee
Confidence            9999999999872     12336999999999999999999999   888  9999999999999999999999998876


Q ss_pred             ccCCCccccccccccccccccC---------CCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHH
Q 045682          212 SIPEGELLTGLRAFDLARLNED---------DGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       212 ~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ..... ...|...|.+|+....         .+.|+++..++.++.+....      +...........+..+...+.++
T Consensus       162 ~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (271)
T 3kmu_A          162 SFQSP-GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHV  240 (271)
T ss_dssp             TTSCT-TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHH
T ss_pred             eeccc-CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHH
Confidence            54332 2344555555554321         35566666666666543321      12222222222233334567889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      .+++..||+.||++|||+.++++.|+++.+
T Consensus       241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            999999999999999999999999998864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.8e-38  Score=275.33  Aligned_cols=237  Identities=17%  Similarity=0.240  Sum_probs=180.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhh--ccCCcceeeeeeeeeC----CceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQ--MIHRCFFKLIGCCLET----QIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~g~~~~~----~~~~l  130 (309)
                      .++|...+.||+|+||+||+|.++++.||||++...   ....+..|.+++..  ++||||+++++++...    ...++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            467899999999999999999999999999998654   34556677777776  7999999999987653    45899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG-----FPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-----~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ||||+++|+|.+++.        ...+++..++.++.|++.||.|||+.     .+.+|+||||||+|||++.++.+||+
T Consensus        84 v~e~~~~g~L~~~l~--------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           84 ITHYHEMGSLYDYLQ--------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EECCCTTCBHHHHHT--------TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred             ehhhccCCCHHHHHh--------hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence            999999999999985        45799999999999999999999932     15799999999999999999999999


Q ss_pred             ecccccccCCCc--------cccccccccccccccC------------CCcccHHHHHHHHhhcc-----------cccc
Q 045682          206 DFSFSISIPEGE--------LLTGLRAFDLARLNED------------DGYVALRDHVKKYFEED-----------RLNE  254 (309)
Q Consensus       206 Dfg~a~~~~~~~--------~~~g~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-----------~~~~  254 (309)
                      |||+++......        ...|...|.+|+....            .+.|+++..+++++.+.           .+..
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence            999997653322        1256666666664332            24556666666665441           1100


Q ss_pred             c---------c-ccccc-CCCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          255 I---------I-DPLIM-GDRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       255 ~---------~-~~~~~-g~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .         + ..... +..+..+    ....+.++.+|+.+||+.||++|||+.+|++.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          236 VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            0         0 00000 1111111    235778899999999999999999999999999986

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.9e-39  Score=282.41  Aligned_cols=250  Identities=20%  Similarity=0.276  Sum_probs=190.4

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeC
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLET  125 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  125 (309)
                      ....++|...+.||+|+||.||+|.+       ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.++
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   98 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD   98 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence            33457788899999999999999986       23789999997653 34457799999999999999999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCC-----------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCC
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNP-----------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD  188 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~d  188 (309)
                      +..++||||+++|+|.+++......                 ......+++..++.++.||+.||.|||   +.+++|||
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~d  175 (314)
T 2ivs_A           99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRD  175 (314)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred             CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccc
Confidence            9999999999999999999743210                 001245899999999999999999999   89999999


Q ss_pred             CCCCCeeecCCCcEEEeecccccccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhh-ccc----
Q 045682          189 FKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR----  251 (309)
Q Consensus       189 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~----  251 (309)
                      |||+||+++.++.+||+|||++.......      ...+...|.+|+..      ...+.|+++..++.++. +..    
T Consensus       176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  255 (314)
T 2ivs_A          176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG  255 (314)
T ss_dssp             CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999998664432      12222334444422      22355666666666664 321    


Q ss_pred             --ccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          252 --LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       252 --~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                        ..++......+... ..+...+.++.+|+.+||+.||++|||+.+|++.|+++...
T Consensus       256 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          256 IPPERLFNLLKTGHRM-ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             CCGGGHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHhhcCCcC-CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence              12222222223222 22235678899999999999999999999999999998764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.5e-39  Score=280.50  Aligned_cols=240  Identities=18%  Similarity=0.278  Sum_probs=187.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CC-------eEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QE-------RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      .++|...+.||+|+||.||+|.+  ++       ..||+|.+........+.+.+|+.++.+++||||+++++++.+++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            35688889999999999999998  33       5799999977666667889999999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc------
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV------  201 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~------  201 (309)
                      .++||||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.      
T Consensus        87 ~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~  157 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKK------NKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNP  157 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHH------TGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred             CEEEEECCCCCCHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCccccccc
Confidence            9999999999999999862      2344999999999999999999999   899999999999999998887      


Q ss_pred             --EEEeecccccccCCCccccccccccccccccC-------CCcccHHHHHHHHhhcc-ccccccc-----ccccCCCCC
Q 045682          202 --AKLFDFSFSISIPEGELLTGLRAFDLARLNED-------DGYVALRDHVKKYFEED-RLNEIID-----PLIMGDRSC  266 (309)
Q Consensus       202 --~kl~Dfg~a~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~g~~~~  266 (309)
                        +||+|||++..........|..+|.+|+....       .+.|+++..++.++.+. ......+     ........ 
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~-  236 (289)
T 4fvq_A          158 PFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ-  236 (289)
T ss_dssp             CEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-
T ss_pred             ceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCC-
Confidence              99999999987766666667777777665433       23445555555555421 1111000     00000100 


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                       .+...+.++.+|+..||+.||.+|||+.++++.|+++..+
T Consensus       237 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          237 -LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             -CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             -CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence             0112246689999999999999999999999999987654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-38  Score=278.63  Aligned_cols=242  Identities=17%  Similarity=0.221  Sum_probs=186.2

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc--cCCcceeeeeeeeeC----C
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM--IHRCFFKLIGCCLET----Q  126 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~g~~~~~----~  126 (309)
                      -....++|...+.||+|+||.||+|.++++.||||++....   ...+..|.+++..+  +||||+++++++...    .
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            33455789999999999999999999999999999986442   34455566666555  999999999999887    6


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC--------CeEeCCCCCCCeeecC
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR--------PVIFRDFKLSNILFNE  198 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~--------~iiH~dlkp~Nill~~  198 (309)
                      ..++||||+++|+|.+++.        ...+++..++.++.|++.||.|||   +.        +|+||||||+|||++.
T Consensus       109 ~~~lv~e~~~~g~L~~~l~--------~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~  177 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLK--------STTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKK  177 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHH--------HCCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred             ceEEEEeccCCCcHHHHhh--------ccCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECC
Confidence            7899999999999999986        346999999999999999999999   77        9999999999999999


Q ss_pred             CCcEEEeecccccccCCCc--------cccccccccccccccC------------CCcccHHHHHHHHhhccccc-----
Q 045682          199 ENVAKLFDFSFSISIPEGE--------LLTGLRAFDLARLNED------------DGYVALRDHVKKYFEEDRLN-----  253 (309)
Q Consensus       199 ~~~~kl~Dfg~a~~~~~~~--------~~~g~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~-----  253 (309)
                      ++.+||+|||++.......        ...|...|.+|+....            .+.|+++..+++++.+....     
T Consensus       178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~  257 (337)
T 3mdy_A          178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE  257 (337)
T ss_dssp             TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred             CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence            9999999999997654332        2346666766664322            36667777777776552111     


Q ss_pred             ------cc----------ccccccCCCCCC-----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          254 ------EI----------IDPLIMGDRSCS-----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       254 ------~~----------~~~~~~g~~~~~-----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                            ..          ............     ....++.++.+|+.+||+.||.+|||+.+|++.|+.+.++.
T Consensus       258 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          258 YQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             CCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             ccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence                  00          000000111111     12377888999999999999999999999999999998763

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=4.9e-39  Score=299.10  Aligned_cols=246  Identities=16%  Similarity=0.250  Sum_probs=192.9

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      +.++....+|...+.||+|+||.||+|.+  ++..||||.+.... ...+.|.+|+.++++++||||++++++|...+..
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence            33444566788889999999999999999  58999999997654 3457899999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|.+++...     ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       292 ~lv~E~~~~g~L~~~l~~~-----~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG  363 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLREC-----NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFG  363 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHS-----CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTT
T ss_pred             EEEEEccCCCCHHHHHHhc-----CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecc
Confidence            9999999999999999632     3456899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCccc-----ccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchH
Q 045682          209 FSISIPEGELL-----TGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       209 ~a~~~~~~~~~-----~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~  270 (309)
                      +++........     .+...|.+|+...      ..+.|+++..+|+++. +..      ..++...+..+ .....+.
T Consensus       364 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~  442 (495)
T 1opk_A          364 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPE  442 (495)
T ss_dssp             CEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCCCCCT
T ss_pred             cceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCC
Confidence            99876543311     1223344444322      2356666666676664 321      12222222222 2222334


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      .++.++.+|+.+||+.||++|||+.+|++.|+.+..
T Consensus       443 ~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          443 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            667889999999999999999999999999987643

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=287.41  Aligned_cols=250  Identities=17%  Similarity=0.247  Sum_probs=191.3

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEeC---------CeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeee
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFCQ---------ERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCC  122 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~  122 (309)
                      ....++|...+.||+|+||.||+|.+.         +..||+|++.... ......+.+|+.++..+ +||||+++++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            344577888999999999999999962         2679999997753 34457799999999999 999999999999


Q ss_pred             eeCCceEEEEEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          123 LETQIPILVFEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      ..++..++||||+++|+|.+++......         ......+++..++.++.||+.||.|||   +.+|+||||||+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN  221 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcce
Confidence            9999999999999999999999743210         112356999999999999999999999   8999999999999


Q ss_pred             eeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccc
Q 045682          194 ILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNE  254 (309)
Q Consensus       194 ill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~  254 (309)
                      ||++.++.+||+|||+++......      ...+...+.+|+...      ..+.|+++..++.++. +..      ..+
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~  301 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE  301 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999998664322      122233355554322      2345556666665554 221      122


Q ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          255 IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       255 ~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +...+..+.... .+..++.++.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus       302 ~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          302 LFKLLKEGHRMD-KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             HHHHHHTTCCCC-CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCC-CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            333333332222 2235668899999999999999999999999999998765

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.3e-39  Score=299.86  Aligned_cols=247  Identities=19%  Similarity=0.251  Sum_probs=190.3

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .+.++...++|...+.||+|+||.||+|.+ .+..||||.+.... ...+.|.+|+.++++++||||+++++++.+ +..
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence            445556677788899999999999999999 56789999997654 335679999999999999999999999876 678


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|.+++...     ....+++..++.++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       254 ~iv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG  325 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG  325 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHH-----HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             EEEehhhcCCCHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCc
Confidence            9999999999999998622     2346899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCcc-----cccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchH
Q 045682          209 FSISIPEGEL-----LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       209 ~a~~~~~~~~-----~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~  270 (309)
                      +++.......     ..+...+.+|+...      ..+.|+++..+|+++. +..      ..+++..+..+.... .+.
T Consensus       326 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-~~~  404 (452)
T 1fmk_A          326 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPP  404 (452)
T ss_dssp             TTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-CCT
T ss_pred             cceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-CCC
Confidence            9987654321     12233455554321      2355666666777665 321      123344444443332 233


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .++..+.+|+.+||+.||++|||+.+|++.|+++..+
T Consensus       405 ~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          405 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            6778899999999999999999999999999987654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=8.6e-39  Score=274.61  Aligned_cols=237  Identities=19%  Similarity=0.259  Sum_probs=175.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCc----hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKP----RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .++|...+.||+|+||.||+|.+++..||+|.+.....    ...+.+.+|+.+++.++||||+++++++..++..++||
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            35788899999999999999999999999999866432    23467899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC---eEeCCCCCCCeeecC--------CCc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP---VIFRDFKLSNILFNE--------ENV  201 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~---iiH~dlkp~Nill~~--------~~~  201 (309)
                      ||+++++|.+++.        ...+++..++.++.|++.||.|||   +.+   ++||||||+||+++.        ++.
T Consensus        86 e~~~~~~L~~~~~--------~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~  154 (271)
T 3dtc_A           86 EFARGGPLNRVLS--------GKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKI  154 (271)
T ss_dssp             ECCTTEEHHHHHT--------SSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred             EcCCCCCHHHHhh--------cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcc
Confidence            9999999999984        457999999999999999999999   677   999999999999986        778


Q ss_pred             EEEeecccccccCCCc--ccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCC
Q 045682          202 AKLFDFSFSISIPEGE--LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCS  267 (309)
Q Consensus       202 ~kl~Dfg~a~~~~~~~--~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~  267 (309)
                      +||+|||++.......  ...|...|.+|+...      ..+.|+++..++.++.+....      ........+.....
T Consensus       155 ~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  234 (271)
T 3dtc_A          155 LKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP  234 (271)
T ss_dssp             EEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC
T ss_pred             eEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC
Confidence            9999999997654332  234555555555322      224455555555555443221      11122222232333


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .+..++..+.+++.+||+.||.+|||+.++++.|++|
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          235 IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            3345668899999999999999999999999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.5e-38  Score=277.02  Aligned_cols=232  Identities=18%  Similarity=0.207  Sum_probs=177.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--------------------------hhHHHHHHHHHHHh
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--------------------------RMYDCCINNIVYAS  108 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~  108 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            36788899999999999999998  789999999865421                          12356889999999


Q ss_pred             hccCCcceeeeeeeee--CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 045682          109 QMIHRCFFKLIGCCLE--TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF  186 (309)
Q Consensus       109 ~l~h~niv~l~g~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH  186 (309)
                      +++||||+++++++.+  .+..++||||+++++|.+++.        ...+++..+..++.|++.||.|||   +.+|+|
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH  160 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--------LKPLSEDQARFYFQDLIKGIEYLH---YQKIIH  160 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--------SSCCCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence            9999999999999986  567899999999999998753        467999999999999999999999   899999


Q ss_pred             CCCCCCCeeecCCCcEEEeecccccccCCCc----cccccccccccccccCC---------CcccHHHHHHHHhhcccc-
Q 045682          187 RDFKLSNILFNEENVAKLFDFSFSISIPEGE----LLTGLRAFDLARLNEDD---------GYVALRDHVKKYFEEDRL-  252 (309)
Q Consensus       187 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-  252 (309)
                      |||||+|||++.++.+||+|||++.......    ...|...|.+|+.....         +.|+++..++.++.+... 
T Consensus       161 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  240 (298)
T 2zv2_A          161 RDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF  240 (298)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence            9999999999999999999999998765432    23466667777654322         445555555555544322 


Q ss_pred             -----cccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          253 -----NEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       253 -----~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                           ..+......+....+.....+.++.+|+.+||+.||++|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          241 MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             CCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence                 11122222222222222345678999999999999999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=8.2e-39  Score=283.28  Aligned_cols=229  Identities=17%  Similarity=0.206  Sum_probs=181.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.+++.++||||+++++++...+..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            6788899999999999999998  88999999986531   223357889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+ +|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        89 E~~-~g~l~~~l~-------~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~  157 (336)
T 3h4j_B           89 EYA-GGELFDYIV-------EKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNI  157 (336)
T ss_dssp             CCC-CEEHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBT
T ss_pred             ECC-CCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEecccee
Confidence            999 679999986       3467999999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCc---cccccccccccccccCCCcccHHHHH-------HHHhhcc------cccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNEDDGYVALRDHV-------KKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      .....   ...|...|.+|+...+..+.....++       +.++.+.      ...++......+...  .+...+.++
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~  235 (336)
T 3h4j_B          158 MTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV--MPDFLSPGA  235 (336)
T ss_dssp             TTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCC--CCTTSCHHH
T ss_pred             ccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCC--CcccCCHHH
Confidence            65543   34566777777765443333344444       4444332      222333333333322  223456889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||.+|||+.|+++
T Consensus       236 ~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          236 QSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHcCCChhHCcCHHHHHh
Confidence            99999999999999999999974

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=5e-39  Score=285.26  Aligned_cols=252  Identities=22%  Similarity=0.281  Sum_probs=192.4

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEeCC-------eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeee
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFCQE-------RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCL  123 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~  123 (309)
                      .+....++|...+.||+|+||.||+|.+.+       +.||+|.+.... ......+.+|+.++..++||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            344456889999999999999999999832       889999997653 334567999999999999999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNPQ-----------------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF  186 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH  186 (309)
                      .++..++||||+++|+|.+++.......                 .....+++..++.++.||+.||.|||   +.+|+|
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH  197 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH  197 (343)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence            9999999999999999999997432100                 01267999999999999999999999   899999


Q ss_pred             CCCCCCCeeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-ccc--
Q 045682          187 RDFKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR--  251 (309)
Q Consensus       187 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~--  251 (309)
                      |||||+|||++.++.+||+|||++.......      ...|...|.+|+...      ..+.|+++..++.++. +..  
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            9999999999999999999999987653322      122333344444321      2355666666666664 321  


Q ss_pred             ----ccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          252 ----LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       252 ----~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                          ..++...+..+..+. .+..++.++.+|+..||+.||.+|||+.+|++.|+++...
T Consensus       278 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          278 YGMAHEEVIYYVRDGNILA-CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             TTSCHHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             CCCChHHHHHHHhCCCcCC-CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence                122333333333322 2235668899999999999999999999999999998754

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-38  Score=277.31  Aligned_cols=233  Identities=12%  Similarity=0.159  Sum_probs=184.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.... .....+.+|+.++..++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            46788899999999999999999  78999999987553 4456788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC--CCcEEEeecccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE--ENVAKLFDFSFSIS  212 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~  212 (309)
                      +++|+|.+++.      .....+++..++.++.|++.||.|||   +.+|+||||||+|||++.  ++.+||+|||++..
T Consensus        83 ~~g~~L~~~l~------~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~  153 (321)
T 1tki_A           83 ISGLDIFERIN------TSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             CCCCBHHHHHT------SSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             CCCCCHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence            99999999985      12357999999999999999999999   899999999999999987  78999999999988


Q ss_pred             cCCCc---cccccccccccccccC------CCcccHHHHHHHHhhccc------ccccccccccCCCCCCch--HHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGK--EQQLQA  275 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~--~~~~~~  275 (309)
                      .....   ...|...|.+|+....      .+.|+++..++.++.+..      ..+++..+..+...+...  ...+.+
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  233 (321)
T 1tki_A          154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE  233 (321)
T ss_dssp             CCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred             CCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHH
Confidence            75543   3345555666654322      234555555555544432      223334444444433321  234678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||+.||.+|||+.++++
T Consensus       234 ~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          234 AMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999999986

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.5e-38  Score=281.86  Aligned_cols=233  Identities=16%  Similarity=0.182  Sum_probs=186.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .+.|...+.||+|+||.||+|.+  +++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            46788999999999999999999  789999999876432      1346799999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC----cEEE
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN----VAKL  204 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~----~~kl  204 (309)
                      ++||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++    .+||
T Consensus        91 ~lv~e~~~gg~L~~~l~-------~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl  160 (361)
T 2yab_A           91 VLILELVSGGELFDFLA-------QKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (361)
T ss_dssp             EEEEECCCSCBHHHHHT-------TCSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEEEEcCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEE
Confidence            99999999999999986       5567999999999999999999999   89999999999999998777    7999


Q ss_pred             eecccccccCCCc---cccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCch
Q 045682          205 FDFSFSISIPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       205 ~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~  269 (309)
                      +|||++.......   ...|...|.+|+....      .+.|+++..++.++.+...      .+.+..+..+...+...
T Consensus       161 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  240 (361)
T 2yab_A          161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE  240 (361)
T ss_dssp             CCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHH
T ss_pred             EecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCch
Confidence            9999998775542   3446666666664332      2445555555655544322      23333444444433221


Q ss_pred             --HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          270 --EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       270 --~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                        ...+.++.+|+..||+.||.+|||+.++++
T Consensus       241 ~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          241 FFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              234678999999999999999999999874

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=9.6e-39  Score=281.32  Aligned_cols=250  Identities=17%  Similarity=0.252  Sum_probs=177.1

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe--CCe---EEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC--QER---LISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET  125 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  125 (309)
                      +....++|...+.||+|+||.||+|.+  ++.   .||+|.+...  .....+.+.+|+.++++++||||+++++++...
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   97 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS   97 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence            344567899999999999999999998  332   7999998764  345567899999999999999999999999876


Q ss_pred             Cce------EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          126 QIP------ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       126 ~~~------~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                      ...      ++||||+++|+|.+++..... ......+++..++.++.|++.||.|||   +.+|+||||||+|||++.+
T Consensus        98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A           98 RAKGRLPIPMVILPFMKHGDLHAFLLASRI-GENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAED  173 (323)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHHHC----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTT
T ss_pred             ccccCCCccEEEEEeccCCcHHHHHHhhhc-cccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCC
Confidence            654      999999999999999864321 112346999999999999999999999   8999999999999999999


Q ss_pred             CcEEEeecccccccCCCcc------ccccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccc
Q 045682          200 NVAKLFDFSFSISIPEGEL------LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLI  260 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~~------~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~  260 (309)
                      +.+||+|||+++.......      ..+...+.+|+..      ...+.|+++..++.++. +...      .++.....
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~  253 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI  253 (323)
T ss_dssp             SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh
Confidence            9999999999987644321      1222234444422      12345566666666554 2221      22222233


Q ss_pred             cCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          261 MGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       261 ~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+... ..+...+.++.+|+.+||+.||.+|||+.++++.|+++...
T Consensus       254 ~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          254 GGNRL-KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             TTCCC-CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCCCC-CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            23222 22235668899999999999999999999999999998764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.1e-38  Score=273.64  Aligned_cols=239  Identities=17%  Similarity=0.238  Sum_probs=187.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .++|...+.||+|+||.||+|.+ ++..||+|.+..... ..+.+.+|+.++.+++||||+++++++.+++..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            46688899999999999999999 677899999976542 3467999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.....
T Consensus        86 ~~~~L~~~l~~------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  156 (268)
T 3sxs_A           86 SNGCLLNYLRS------HGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD  156 (268)
T ss_dssp             TTCBHHHHHHH------HGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred             CCCcHHHHHHH------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence            99999999862      2346999999999999999999999   89999999999999999999999999999987654


Q ss_pred             Cccc-----ccccccccccc------ccCCCcccHHHHHHHHhh-ccccc------ccccccccCCCCCCchHHHHHHHH
Q 045682          216 GELL-----TGLRAFDLARL------NEDDGYVALRDHVKKYFE-EDRLN------EIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       216 ~~~~-----~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ....     .+...|.+|+.      ....+.|+++..++.++. +....      +.......+..... +...++.+.
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~  235 (268)
T 3sxs_A          157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR-PHLASDTIY  235 (268)
T ss_dssp             TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC-CTTSCHHHH
T ss_pred             hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCC-CCcChHHHH
Confidence            4321     12222444432      223466777777777764 33221      12222222322222 224567899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      +++..||+.||.+|||+.++++.|+.+.+
T Consensus       236 ~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          236 QIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            99999999999999999999999988754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-38  Score=282.30  Aligned_cols=252  Identities=15%  Similarity=0.186  Sum_probs=186.2

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeee
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCL  123 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  123 (309)
                      ++...++|...+.||+|+||.||+|.+       ++..||+|.+.... ....+.+.+|+.++.++ +||||+++++++.
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            444567899999999999999999996       34689999997642 33457799999999999 9999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCC----------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeC
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNP----------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR  187 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~  187 (309)
                      ..+..++||||+++|+|.+++......                ......+++..++.++.||+.||.|||   +.+|+||
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~  196 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHR  196 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred             eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence            999999999999999999998632210                001234899999999999999999999   8999999


Q ss_pred             CCCCCCeeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-ccccc-
Q 045682          188 DFKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRLN-  253 (309)
Q Consensus       188 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~-  253 (309)
                      ||||+|||++.++.+||+|||++.......      ...|...|.+|+...      ..+.|+++..++.++. +.... 
T Consensus       197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  276 (344)
T 1rjb_A          197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP  276 (344)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence            999999999999999999999997654332      122233455554321      2355666666666664 32211 


Q ss_pred             -----ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          254 -----EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       254 -----~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                           ..+............+...+.++.+|+.+||+.||.+|||+.+|++.|+.+..+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          277 GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             TCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             cCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence                 111112222222222335568899999999999999999999999999998765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=8.5e-39  Score=276.44  Aligned_cols=243  Identities=17%  Similarity=0.238  Sum_probs=186.1

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ....++|...+.||+|+||.||+|.+ ++..||+|.+..... ..+.+.+|+.++..++||||+++++++.+++..++||
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   98 (283)
T 3gen_A           20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT   98 (283)
T ss_dssp             BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence            33456788899999999999999999 778899999976542 3467999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..
T Consensus        99 e~~~~~~L~~~l~~------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~  169 (283)
T 3gen_A           99 EYMANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY  169 (283)
T ss_dssp             CCCTTCBHHHHHHC------GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred             eccCCCcHHHHHHH------hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccc
Confidence            99999999999861      2456999999999999999999999   89999999999999999999999999999986


Q ss_pred             cCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHH
Q 045682          213 IPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       213 ~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      .....     ...+...|.+|+...      ..+.|+++..++.++. +...      .+.......+... ..+...+.
T Consensus       170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~  248 (283)
T 3gen_A          170 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL-YRPHLASE  248 (283)
T ss_dssp             BCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC-CCCTTCCH
T ss_pred             ccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCC-CCCCcCCH
Confidence            64432     112222344444322      2345566666666654 3221      1122222222221 12234467


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+.+|+.+||+.+|.+|||+.++++.|.++.+.
T Consensus       249 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          249 KVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            899999999999999999999999999998764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.1e-38  Score=279.51  Aligned_cols=233  Identities=17%  Similarity=0.201  Sum_probs=179.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            36788999999999999999998  789999999865432 233568899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        86 ~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  155 (323)
T 3tki_A           86 YCSGGELFDRIE-------PDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVF  155 (323)
T ss_dssp             CCTTEEGGGGSB-------TTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCCCcHHHHHh-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeecccee
Confidence            999999999986       5567999999999999999999999   899999999999999999999999999999765


Q ss_pred             CCC------ccccccccccccccccCC-------CcccHHHHHHHHhhcccccc-------cccccccCCCCCCchHHHH
Q 045682          214 PEG------ELLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNE-------IIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       214 ~~~------~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~  273 (309)
                      ...      ....|...|.+|+.....       +.|+++..++.++.+.....       ..................+
T Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (323)
T 3tki_A          156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID  235 (323)
T ss_dssp             EETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSC
T ss_pred             ccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCC
Confidence            322      134566666666654333       33444445555544432211       1111111122222223566


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.+|+.+||+.||++|||+.|+++
T Consensus       236 ~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          236 SAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhh
Confidence            88999999999999999999999864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.9e-38  Score=273.03  Aligned_cols=241  Identities=16%  Similarity=0.215  Sum_probs=177.3

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-C----CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-Q----ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ..++|...+.||+|+||.||+|.+ .    +..||+|.+.... ....+.+.+|+.++.+++||||+++++++. ++..+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence            446788899999999999999998 2    3579999987643 344567999999999999999999999985 46789


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+
T Consensus        92 lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  162 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQV------RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGL  162 (281)
T ss_dssp             EEEECCTTEEHHHHHHH------TTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---
T ss_pred             EEEecCCCCCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccc
Confidence            99999999999999862      2346999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          210 SISIPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      ++......     ...+...|.+|+...      ..+.|+++..++.++. +...      .+.+..+..+.... .+..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~  241 (281)
T 1mp8_A          163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN  241 (281)
T ss_dssp             ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC-CCTT
T ss_pred             ccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCC-CCCC
Confidence            98764432     122233344444322      2345666666666553 3211      22222333333222 2235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+..+.+++..||+.||++|||+.+|++.|+++.+.
T Consensus       242 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          242 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            678899999999999999999999999999998764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.1e-38  Score=277.64  Aligned_cols=252  Identities=16%  Similarity=0.227  Sum_probs=190.7

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASKP-RMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      ....++|...+.||+|+||.||+|.+       ++..||+|.+..... ...+.+.+|+.++.++ +||||+++++++..
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   98 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence            34557788999999999999999985       458899999976543 3457799999999999 99999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNP-----------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      ++..++||||+++|+|.+++......           ......+++..++.++.|++.||.|||   +.+++||||||+|
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~N  175 (313)
T 1t46_A           99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARN  175 (313)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccce
Confidence            99999999999999999998643210           011335899999999999999999999   8999999999999


Q ss_pred             eeecCCCcEEEeecccccccCCCcc------cccccccccccccc------CCCcccHHHHHHHHhh-ccccc------c
Q 045682          194 ILFNEENVAKLFDFSFSISIPEGEL------LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRLN------E  254 (309)
Q Consensus       194 ill~~~~~~kl~Dfg~a~~~~~~~~------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~------~  254 (309)
                      |+++.++.+||+|||++........      ..|...|.+|+...      ..+.|+++..++.++. +....      .
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  255 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS  255 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence            9999999999999999987654331      12223355554321      2345666666666654 32211      1


Q ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          255 IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       255 ~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .+............+...+.++.+|+.+||+.||.+|||+.++++.|+++...+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          256 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence            111111111122222355688999999999999999999999999999998764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.7e-38  Score=278.13  Aligned_cols=241  Identities=19%  Similarity=0.235  Sum_probs=187.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC--ceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ--IPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--~~~  129 (309)
                      ++|...+.||+|+||.||+|.+      +++.||+|++........+.+.+|+.++..++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            5578889999999999999984      67999999998876667788999999999999999999999987644  789


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++++|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+
T Consensus       121 lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~  191 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQK------HKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGL  191 (326)
T ss_dssp             EEECCCTTCBHHHHHHH------STTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred             EEEECCCCCCHHHHHHh------cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence            99999999999999862      2356999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCcc-------ccccccccccccc------cCCCcccHHHHHHHHhhcccccc----------------------
Q 045682          210 SISIPEGEL-------LTGLRAFDLARLN------EDDGYVALRDHVKKYFEEDRLNE----------------------  254 (309)
Q Consensus       210 a~~~~~~~~-------~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----------------------  254 (309)
                      +........       ..+...+.+|+..      ...+.|+++..++.++.+.....                      
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (326)
T 2w1i_A          192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH  271 (326)
T ss_dssp             CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence            987654321       1222234444432      12355666666666654321110                      


Q ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          255 IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       255 ~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      +......+.. .+.+..++.++.+|+.+||+.||++|||+.+|++.|+++..++
T Consensus       272 ~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l  324 (326)
T 2w1i_A          272 LIELLKNNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM  324 (326)
T ss_dssp             HHHHHHTTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            1111111211 2223356788999999999999999999999999999998875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=3.2e-38  Score=275.21  Aligned_cols=239  Identities=15%  Similarity=0.204  Sum_probs=182.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--Cce
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIP  128 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~  128 (309)
                      ..|...+.||+|+||.||+|.+      +++.||+|.+.... ......+.+|+.++..++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4478889999999999999993      67999999997643 34457799999999999999999999999876  668


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|.+++..      ....+++..++.++.|++.||+|||   +.+|+|+||||+||+++.++.+||+|||
T Consensus       101 ~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg  171 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPK------NKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFG  171 (302)
T ss_dssp             EEEEECCTTCBHHHHHHH------HTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             EEEEEeCCCCcHHHHHHh------ccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccc
Confidence            999999999999999852      3456999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCc-------ccccccccccccccc------CCCcccHHHHHHHHhhcccc---------------------cc
Q 045682          209 FSISIPEGE-------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL---------------------NE  254 (309)
Q Consensus       209 ~a~~~~~~~-------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---------------------~~  254 (309)
                      ++.......       ...|...+.+|+...      ..+.|+++..++.++.+...                     ..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  251 (302)
T 4e5w_A          172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR  251 (302)
T ss_dssp             TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred             ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence            998765432       122333344444221      23455666666665543211                     11


Q ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          255 IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       255 ~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      +......+. ....+...+.++.+|+.+||+.||.+|||+.++++.|+++.+
T Consensus       252 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          252 LVNTLKEGK-RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             HHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HHHHHhccC-CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence            111111122 222223566889999999999999999999999999998863

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1.9e-38  Score=280.18  Aligned_cols=238  Identities=18%  Similarity=0.250  Sum_probs=178.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe----EEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER----LISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++|...+.||+|+||.||+|.+  +++    +||+|.+... .....+.+.+|+.++.+++||||+++++++..+. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            5688889999999999999998  443    4688887654 2345578999999999999999999999998754 789


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |+||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus        94 v~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a  164 (327)
T 3poz_A           94 ITQLMPFGCLLDYVRE------HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLA  164 (327)
T ss_dssp             EEECCTTCBHHHHHHH------STTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred             EEEecCCCcHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcce
Confidence            9999999999999862      2467999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          211 ISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      +......      ...+...|.+|+...      ..+.|+++..++.++. +...      .++......+... ..+..
T Consensus       165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~  243 (327)
T 3poz_A          165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL-PQPPI  243 (327)
T ss_dssp             HHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-CCCTT
T ss_pred             eEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCC-CCCcc
Confidence            8764432      112223344444321      2355666666666654 3221      1222222222222 22335


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ++.++.+|+.+||+.||.+|||+.+|++.|+.+..
T Consensus       244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            67889999999999999999999999999998865

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-37  Score=270.36  Aligned_cols=239  Identities=17%  Similarity=0.227  Sum_probs=182.3

Q ss_pred             CCccCceeecCCeEEEEEEe--CC---eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce-EEEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QE---RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP-ILVF  132 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~-~lv~  132 (309)
                      |...+.||+|+||.||+|.+  ++   ..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+.. ++||
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            55568899999999999997  32   379999987654 34457799999999999999999999999865554 9999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+.+|+|.+++.      .....+++..++.++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++..
T Consensus       103 e~~~~~~L~~~~~------~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~  173 (298)
T 3pls_A          103 PYMCHGDLLQFIR------SPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARD  173 (298)
T ss_dssp             CCCTTCBHHHHHH------CTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred             ecccCCCHHHHHh------ccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence            9999999999986      23567899999999999999999999   89999999999999999999999999999976


Q ss_pred             cCCCc--------ccccccccccccccc------CCCcccHHHHHHHHhhcc-cc------cccccccccCCCCCCchHH
Q 045682          213 IPEGE--------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEED-RL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       213 ~~~~~--------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      .....        ...+...+.+++...      ..+.|+++..++.++.+. ..      .++......+.. ...+..
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  252 (298)
T 3pls_A          174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR-LPQPEY  252 (298)
T ss_dssp             TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC-CCCCTT
T ss_pred             ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC-CCCCcc
Confidence            54332        122233344443322      224455555656555522 21      122222222222 222335


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .+..+.+|+.+||+.||.+|||+.++++.|+++.+++
T Consensus       253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          253 CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999998764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=4.1e-38  Score=290.61  Aligned_cols=230  Identities=17%  Similarity=0.199  Sum_probs=184.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||||.+....   ......+.+|+.+++.++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            6788899999999999999998  78999999986542   223467899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        96 E~~~gg~L~~~l~-------~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~  165 (476)
T 2y94_A           96 EYVSGGELFDYIC-------KNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNM  165 (476)
T ss_dssp             ECCSSEEHHHHTT-------SSSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             eCCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhh
Confidence            9999999999986       5567999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc---cccccccccccccccCC-------CcccHHHHHHHHhhccc------ccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      .....   ...|...|.+|+...+.       +.|+++..++.++.+..      ...+...+..+....  +...+.++
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--p~~~s~~~  243 (476)
T 2y94_A          166 MSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYT--PQYLNPSV  243 (476)
T ss_dssp             CCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCC--CTTCCHHH
T ss_pred             ccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCC--CccCCHHH
Confidence            75543   34566677777654433       33444444444444332      222333333333322  22455789


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||.+|||+.++++
T Consensus       244 ~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          244 ISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHcCCCchhCcCHHHHHh
Confidence            99999999999999999999985

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=9.9e-39  Score=276.60  Aligned_cols=246  Identities=16%  Similarity=0.251  Sum_probs=191.8

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++....++|...+.||+|+||.||+|.+  ++..||+|.+.... ...+.+.+|+.++++++||||+++++++.+++..+
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            3344567788899999999999999999  58999999987654 45578999999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++++|.+++...     ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+
T Consensus        86 ~v~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~  157 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLREC-----NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL  157 (288)
T ss_dssp             EEEECCTTEEHHHHHHHC-----CTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred             EEEEcCCCCcHHHHHHhc-----ccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCcc
Confidence            999999999999998632     3466999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCcc-----cccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          210 SISIPEGEL-----LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~~-----~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      +........     ..+...+.+|+...      ..+.|+++..++.++. +...      ..+...... ......+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~  236 (288)
T 3kfa_A          158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEG  236 (288)
T ss_dssp             GGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-TCCCCCCTT
T ss_pred             ceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-cCCCCCCCC
Confidence            987654331     12222344444322      2345556666666654 3211      122222222 222222335


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+..+.+|+..||+.||.+|||+.++++.|+.+...
T Consensus       237 ~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            668899999999999999999999999999998764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.5e-38  Score=283.22  Aligned_cols=232  Identities=20%  Similarity=0.287  Sum_probs=186.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      +.|...+.||+|+||.||+|..  +++.||||++....   ....+.+.+|+.++.+++||||+++++++..++..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588888999999999999997  78999999987543   233467899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+. |+|.+++..      ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus       134 e~~~-g~l~~~l~~------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~  203 (348)
T 1u5q_A          134 EYCL-GSASDLLEV------HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASI  203 (348)
T ss_dssp             ECCS-EEHHHHHHH------HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred             ecCC-CCHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCcee
Confidence            9998 588888752      2467999999999999999999999   89999999999999999999999999999988


Q ss_pred             cCCCcccccccccccccccc---------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHH
Q 045682          213 IPEGELLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       213 ~~~~~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ........|...|.+|+...         ..+.|+++..+++++.+...      .+.+.....+..+...+...+..+.
T Consensus       204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  283 (348)
T 1u5q_A          204 MAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFR  283 (348)
T ss_dssp             SSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHH
T ss_pred             cCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Confidence            77666667777777776431         23456666666666554432      1122222333333333335668899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +|+..||+.||++|||+.++++
T Consensus       284 ~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          284 NFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHcccChhhCcCHHHHhh
Confidence            9999999999999999999874

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.6e-38  Score=268.83  Aligned_cols=240  Identities=19%  Similarity=0.262  Sum_probs=188.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      .++|...+.||+|+||.||+|.+ ++..||+|.+..... ..+.+.+|+.++..++||||+++++++.+++..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            35688889999999999999999 888999999987643 3467999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++++|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.....
T Consensus        86 ~~~~L~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A           86 EHGCLSDYLRT------QRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             TTCBHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             CCCcHHHHHhh------CcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence            99999999862      2356899999999999999999999   89999999999999999999999999999986643


Q ss_pred             Cc-----ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHH
Q 045682          216 GE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       216 ~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ..     ...+...+.+|+...      ..+.|+++..++.++. +...      .+.......+.... .+...+.++.
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~  235 (267)
T 3t9t_A          157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRLASTHVY  235 (267)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-CCTTSCHHHH
T ss_pred             ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC-CCccCcHHHH
Confidence            32     122223344444322      2345566666666654 2221      12222222232222 2234567899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +++.+||+.||++|||+.++++.|+++.++
T Consensus       236 ~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          236 QIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=6.2e-38  Score=274.62  Aligned_cols=245  Identities=19%  Similarity=0.239  Sum_probs=183.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|...+.||+|+||.||+|..  ++..||+|.+...   .......+.+|+.++..++||||+++++++..++..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35688899999999999999998  7899999998753   234456789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++.....   ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.
T Consensus       111 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~  184 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKK---QKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGR  184 (310)
T ss_dssp             EECCCSCBHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred             EecCCCCCHHHHHHHhcc---cccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence            999999999999863211   3466899999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCc----ccccccccccccccc------CCCcccHHHHHHHHhhccccc--------ccccccccCCCCCCchHHHH
Q 045682          212 SIPEGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN--------EIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       212 ~~~~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~  273 (309)
                      ......    ...|...+.+|+...      ..+.|+++..++.++.+....        .+......+..+.......+
T Consensus       185 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (310)
T 2wqm_A          185 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS  264 (310)
T ss_dssp             --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSC
T ss_pred             eecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccC
Confidence            654322    233455555555332      224455555666655443211        12222333333333334566


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .++.+|+..||+.||.+|||+.+|++.|+++...
T Consensus       265 ~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          265 EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            8899999999999999999999999999999865

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=3.9e-38  Score=271.77  Aligned_cols=247  Identities=19%  Similarity=0.278  Sum_probs=189.5

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++++...++|...+.||+|+||.||+|.+ ++..||+|.+.... ...+.+.+|+.++..++||||+++++++.. +..+
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   83 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIY   83 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcE
Confidence            34445567788999999999999999999 67889999987654 345779999999999999999999999874 5689


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++++|.+++...     ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+
T Consensus        84 ~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  155 (279)
T 1qpc_A           84 IITEYMENGSLVDFLKTP-----SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGL  155 (279)
T ss_dssp             EEEECCTTCBHHHHTTSH-----HHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEecCCCCCHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcc
Confidence            999999999999998511     1236999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCcc-----cccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          210 SISIPEGEL-----LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~~-----~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      +........     ..+...+.+|+...      ..+.|+++..++.++. +...      .+++.....+... ..+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~  234 (279)
T 1qpc_A          156 ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDN  234 (279)
T ss_dssp             CEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-CCCTT
T ss_pred             cccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC-CCccc
Confidence            987654432     12223344444321      2355666666666654 3211      1222222222221 22235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .+.++.+|+..||+.||++|||+.+|++.|+++..+.
T Consensus       235 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence            5688999999999999999999999999999998653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=3.5e-38  Score=278.34  Aligned_cols=240  Identities=18%  Similarity=0.217  Sum_probs=184.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe------CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeee--eCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL--ETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~--~~~~~~  129 (309)
                      ++|...+.||+|+||.||+|.+      ++..||+|++........+.+.+|+.++.+++||||+++++++.  +....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5688889999999999999984      67899999998877666778999999999999999999999987  455689


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++++|.+++...      ...+++..++.++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||+
T Consensus       103 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  173 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRH------RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGL  173 (327)
T ss_dssp             EEEECCTTCBHHHHHHHH------GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred             EEEeecCCCCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEccccc
Confidence            999999999999998632      346999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc-------ccccccccccccccc------CCCcccHHHHHHHHhhcccc---------------------ccc
Q 045682          210 SISIPEGE-------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL---------------------NEI  255 (309)
Q Consensus       210 a~~~~~~~-------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---------------------~~~  255 (309)
                      +.......       ...|...|.+|+...      ..+.|+++..++.++.+...                     ..+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  253 (327)
T 3lxl_A          174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL  253 (327)
T ss_dssp             CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred             ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence            98765432       122333344444321      23455555555555543211                     111


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ......+. ....+..++.++.+|+..||+.||.+|||+.+|++.|+.++.+
T Consensus       254 ~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          254 LELLEEGQ-RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             HHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             HHHhhccc-CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            11111122 1222335668899999999999999999999999999988754

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1e-37  Score=276.24  Aligned_cols=248  Identities=16%  Similarity=0.255  Sum_probs=187.7

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe---------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC---------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~---------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      ..++|...+.||+|+||.||+|.+         ++..||+|.+.... ......+.+|+.++..+ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            457789999999999999999986         24679999997653 34457799999999999 99999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCee
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQ---------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL  195 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nil  195 (309)
                      .+..++||||+++|+|.+++.......         .....+++..++.++.||+.||.|||   +.+|+|+||||+||+
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL  189 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEE
Confidence            999999999999999999987332100         01235899999999999999999999   899999999999999


Q ss_pred             ecCCCcEEEeecccccccCCCc------cccccccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccc
Q 045682          196 FNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEII  256 (309)
Q Consensus       196 l~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~  256 (309)
                      ++.++.+||+|||++.......      ...+...|.+|+..      ...+.|+++..++.++. +..      ..++.
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  269 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  269 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence            9999999999999998765432      12222334444422      12345666666666654 221      12222


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .....+.... .+..++.++.+++..||+.||.+|||+.+|++.|+.+...
T Consensus       270 ~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          270 KLLKEGHRMD-KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             HHHHHTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCC-CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            2222232222 2235568899999999999999999999999999998764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=9e-38  Score=286.34  Aligned_cols=234  Identities=16%  Similarity=0.158  Sum_probs=184.9

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ..++|...+.||+|+||.||+|..  +++.+|+|.+....  ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            346688999999999999999998  88999999987654  23446789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec---CCCcEEEeecc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN---EENVAKLFDFS  208 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg  208 (309)
                      |||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++   .++.+||+|||
T Consensus        89 ~E~~~gg~L~~~i~-------~~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG  158 (444)
T 3soa_A           89 FDLVTGGELFEDIV-------AREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFG  158 (444)
T ss_dssp             ECCCBCCBHHHHHH-------HCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCS
T ss_pred             EEeCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCc
Confidence            99999999999986       4567999999999999999999999   89999999999999998   56889999999


Q ss_pred             cccccCCCc----cccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCc--hH
Q 045682          209 FSISIPEGE----LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSG--KE  270 (309)
Q Consensus       209 ~a~~~~~~~----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~--~~  270 (309)
                      ++.......    ...|...|.+|+....      .+.|+++..++.++.+...      .++...+..+....+.  ..
T Consensus       159 ~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  238 (444)
T 3soa_A          159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD  238 (444)
T ss_dssp             SCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTT
T ss_pred             eeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccc
Confidence            998765432    2356666766665432      2445555555555544322      2333444444433322  12


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..++++.+|+..||+.||.+|||+.++++
T Consensus       239 ~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          239 TVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            55688999999999999999999999975

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.3e-37  Score=269.52  Aligned_cols=237  Identities=19%  Similarity=0.273  Sum_probs=182.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchh-------HHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRM-------YDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+.......       .+.+.+|+.++.+++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36788899999999999999999  78999999986543211       167899999999999999999999986654 


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeCCCCCCCeeecCCCc----
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP--VIFRDFKLSNILFNEENV----  201 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--iiH~dlkp~Nill~~~~~----  201 (309)
                       ++||||+++|+|.+++.      .....+++..++.++.|++.||.|||   +.+  ++||||||+|||++.++.    
T Consensus        97 -~lv~e~~~~~~L~~~l~------~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~  166 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPV  166 (287)
T ss_dssp             -EEEEECCTTCBHHHHHH------CTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSC
T ss_pred             -eEEEEecCCCCHHHHHh------cccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCce
Confidence             79999999999999885      23557999999999999999999999   888  999999999999988776    


Q ss_pred             -EEEeecccccccCCCc-ccccccccccccccc--------CCCcccHHHHHHHHhhcccccc--------cccccccCC
Q 045682          202 -AKLFDFSFSISIPEGE-LLTGLRAFDLARLNE--------DDGYVALRDHVKKYFEEDRLNE--------IIDPLIMGD  263 (309)
Q Consensus       202 -~kl~Dfg~a~~~~~~~-~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~  263 (309)
                       +||+|||+++...... ...|...|.+|+...        ..+.|+++..++.++.+.....        .........
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  246 (287)
T 4f0f_A          167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG  246 (287)
T ss_dssp             CEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC
T ss_pred             eEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC
Confidence             9999999998654432 344566666666532        1234555555555554432211        011112222


Q ss_pred             CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          264 RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       264 ~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .....+..+++++.+|+..||+.||.+|||+.++++.|++|
T Consensus       247 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          247 LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            22333346678899999999999999999999999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=9.1e-38  Score=270.03  Aligned_cols=236  Identities=15%  Similarity=0.175  Sum_probs=184.3

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+...  .......+.+|+..+..+ +||||+++++++.+++..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            46688899999999999999999  7899999998764  234556788999999999 999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC------------
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE------------  199 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~------------  199 (309)
                      |||+++++|.+++.....   ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.+            
T Consensus        90 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYR---IMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             EECCTTCBHHHHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC--------------
T ss_pred             EEecCCCcHHHHHHhhcc---cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            999999999999963211   1256899999999999999999999   8999999999999999844            


Q ss_pred             -------CcEEEeecccccccCCCccccccccccccccccCCCcccHHHHHH-------HHhhccccc---ccccccccC
Q 045682          200 -------NVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVK-------KYFEEDRLN---EIIDPLIMG  262 (309)
Q Consensus       200 -------~~~kl~Dfg~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~g  262 (309)
                             ..+||+|||++..........|...+.+|+............++|       .++.+..+.   ........+
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~  243 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG  243 (289)
T ss_dssp             ------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTT
T ss_pred             ccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcC
Confidence                   479999999999887777777888888777654332333344444       444333221   111122222


Q ss_pred             CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+. .+...+.++.+|+.+||+.||++|||+.++++
T Consensus       244 ~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          244 RLPR-IPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             CCCC-CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCC-CCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            2222 12245688999999999999999999999975

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=5.4e-39  Score=301.45  Aligned_cols=248  Identities=19%  Similarity=0.251  Sum_probs=193.8

Q ss_pred             cHHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           49 SAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        49 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      ..+.++...++|...+.||+|+||.||+|.+ .+..||||.+.... ...+.|.+|+.+|++++||||+++++++.+ +.
T Consensus       258 ~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~  335 (535)
T 2h8h_A          258 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP  335 (535)
T ss_dssp             STTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             CccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-cc
Confidence            3455566677888899999999999999999 56789999997654 335679999999999999999999999876 67


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+++|+|.++|...     ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DF  407 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF  407 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHH-----HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCT
T ss_pred             ceEeeehhcCCcHHHHHhhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEccc
Confidence            89999999999999998622     2346899999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCcc-----ccccccccccccc------cCCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCch
Q 045682          208 SFSISIPEGEL-----LTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       208 g~a~~~~~~~~-----~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~  269 (309)
                      |+++.......     ..+...|.+++..      ...+.|+++..+|+++. +..      ..++++.+..+.... .+
T Consensus       408 G~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-~~  486 (535)
T 2h8h_A          408 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CP  486 (535)
T ss_dssp             TSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCC-CC
T ss_pred             ccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-CC
Confidence            99987654321     1222334444432      12356667777777765 221      123344444443322 23


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..++.++.+||.+||+.||++|||+.+|++.|+.+..+
T Consensus       487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            36678899999999999999999999999999987654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.5e-37  Score=272.48  Aligned_cols=249  Identities=19%  Similarity=0.302  Sum_probs=181.5

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC-
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ-  126 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-  126 (309)
                      ...++|...+.||+|+||.||+|.+     ++..||+|.+....  ....+.+.+|+.++.+++||||+++++++...+ 
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  110 (313)
T 3brb_A           31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS  110 (313)
T ss_dssp             CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred             cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence            3456788889999999999999987     23589999987643  344567999999999999999999999998754 


Q ss_pred             ----ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          127 ----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       127 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                          ..++||||+++|+|.+++..... ......+++..++.++.|++.||.|||   +.+|+||||||+||+++.++.+
T Consensus       111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~  186 (313)
T 3brb_A          111 QGIPKPMVILPFMKYGDLHTYLLYSRL-ETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTV  186 (313)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHTTB-TTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCE
T ss_pred             cCCcccEEEEecccCCCHHHHHHHhhh-hcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcE
Confidence                35999999999999999843221 124567999999999999999999999   9999999999999999999999


Q ss_pred             EEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCC
Q 045682          203 KLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGD  263 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~  263 (309)
                      ||+|||++.......      ...+...+.+|+...      ..+.|+++..++.++. +..      ..++......+.
T Consensus       187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  266 (313)
T 3brb_A          187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH  266 (313)
T ss_dssp             EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred             EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC
Confidence            999999998764332      222333344444322      2245566666666654 321      122223333333


Q ss_pred             CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          264 RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       264 ~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .+ ..+...+.++.+|+.+||+.||.+|||+.+|++.|+++.+++
T Consensus       267 ~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          267 RL-KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             CC-CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CC-CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            22 223356688999999999999999999999999999998875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1e-36  Score=270.27  Aligned_cols=250  Identities=16%  Similarity=0.169  Sum_probs=191.7

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhh--ccCCcceeeeeeeeeC
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQ--MIHRCFFKLIGCCLET  125 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~g~~~~~  125 (309)
                      .+..--....++|...+.||+|+||.||+|.++++.||+|.+...   ....+.+|++++..  ++||||+++++++...
T Consensus        32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~  108 (342)
T 1b6c_B           32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD  108 (342)
T ss_dssp             SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred             CceeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence            333333445678999999999999999999999999999998653   34667889999888  6999999999999876


Q ss_pred             C----ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeCCCCCCCeee
Q 045682          126 Q----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG-----FPRPVIFRDFKLSNILF  196 (309)
Q Consensus       126 ~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-----~~~~iiH~dlkp~Nill  196 (309)
                      .    ..++||||+++|+|.+++.        ...+++..++.++.|++.||.|||..     .+.+|+||||||+|||+
T Consensus       109 ~~~~~~~~lv~e~~~~g~L~~~l~--------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll  180 (342)
T 1b6c_B          109 NGTWTQLWLVSDYHEHGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  180 (342)
T ss_dssp             CSSCCCEEEEECCCTTCBHHHHHH--------HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred             CCccceeEEEEeecCCCcHHHHHh--------ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence            5    7899999999999999986        24699999999999999999999931     14689999999999999


Q ss_pred             cCCCcEEEeecccccccCCCc--------cccccccccccccccC------------CCcccHHHHHHHHhhccc-----
Q 045682          197 NEENVAKLFDFSFSISIPEGE--------LLTGLRAFDLARLNED------------DGYVALRDHVKKYFEEDR-----  251 (309)
Q Consensus       197 ~~~~~~kl~Dfg~a~~~~~~~--------~~~g~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-----  251 (309)
                      +.++.+||+|||++.......        ...|...|.+|+....            .+.|+++..++.++.+..     
T Consensus       181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~  260 (342)
T 1b6c_B          181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  260 (342)
T ss_dssp             CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred             CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence            999999999999997654332        2345666666664332            355666666666665421     


Q ss_pred             ------ccc----------cccccccCCCCCCc-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          252 ------LNE----------IIDPLIMGDRSCSG-----KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       252 ------~~~----------~~~~~~~g~~~~~~-----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                            +..          +......+......     ....+..+.+|+.+||+.||++|||+.+|++.|+++.+..
T Consensus       261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             cccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence                  111          11111111111111     1266788999999999999999999999999999998753

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=296.24  Aligned_cols=233  Identities=15%  Similarity=0.208  Sum_probs=182.7

Q ss_pred             ceeecCCeEEEEEEe----CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           65 VIMKRSFYTLYKGFC----QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      .||+|+||.||+|.+    ++..||||.++... ....+.|.+|+.++++++||||+++++++.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            699999999999987    34679999997653 3456789999999999999999999999976 56899999999999


Q ss_pred             hhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc--
Q 045682          140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE--  217 (309)
Q Consensus       140 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--  217 (309)
                      |.+++.      .....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......  
T Consensus       422 L~~~l~------~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~  492 (613)
T 2ozo_A          422 LHKFLV------GKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY  492 (613)
T ss_dssp             HHHHHT------TCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred             HHHHHh------hccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence            999985      23456999999999999999999999   8999999999999999999999999999998764332  


Q ss_pred             -----ccccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHHHHH
Q 045682          218 -----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       218 -----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                           ..++...|.+|+...      ..+.|+++..+|+++. +..      ..+++..+..|.... .+..++.++.+|
T Consensus       493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~-~p~~~~~~l~~l  571 (613)
T 2ozo_A          493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME-CPPECPPELYAL  571 (613)
T ss_dssp             ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCC-CCTTCCHHHHHH
T ss_pred             eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC-CCCcCCHHHHHH
Confidence                 111223344444322      2356667777777664 322      223344444444332 233677899999


Q ss_pred             HHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          280 IFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       280 i~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      |..||+.||++|||+.+|++.|+.+..++
T Consensus       572 i~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          572 MSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             HHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999988764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2e-37  Score=274.32  Aligned_cols=237  Identities=18%  Similarity=0.208  Sum_probs=177.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHH--HhhccCCcceeeeeeeee-----CCceE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVY--ASQMIHRCFFKLIGCCLE-----TQIPI  129 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~g~~~~-----~~~~~  129 (309)
                      .++|...+.||+|+||.||+|.++++.||||++....   ...+..|..+  +..++||||+++++.+..     ....+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            4678889999999999999999999999999986543   2344444444  445799999999986542     33578


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC---------CeEeCCCCCCCeeecCCC
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR---------PVIFRDFKLSNILFNEEN  200 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~---------~iiH~dlkp~Nill~~~~  200 (309)
                      +||||+++|+|.+++.        ....++..++.++.||+.||.|||   +.         +|+||||||+|||++.++
T Consensus        89 lv~e~~~~g~L~~~l~--------~~~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~  157 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLS--------LHTSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDG  157 (336)
T ss_dssp             EEECCCTTCBHHHHHH--------HCCBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTS
T ss_pred             EEEecCCCCcHHHHHh--------hcccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCC
Confidence            9999999999999986        234589999999999999999999   78         999999999999999999


Q ss_pred             cEEEeecccccccCCCc------------cccccccccccccccC-------------CCcccHHHHHHHHhhccccc--
Q 045682          201 VAKLFDFSFSISIPEGE------------LLTGLRAFDLARLNED-------------DGYVALRDHVKKYFEEDRLN--  253 (309)
Q Consensus       201 ~~kl~Dfg~a~~~~~~~------------~~~g~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~--  253 (309)
                      .+||+|||+++......            ...|...|.+|+....             .+.|+++..+++++.+....  
T Consensus       158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            99999999998764322            2346666766665432             25566666666665432110  


Q ss_pred             -----ccc---------------------cccccCCC--CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          254 -----EII---------------------DPLIMGDR--SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       254 -----~~~---------------------~~~~~g~~--~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                           +..                     ........  .+......+.++.+|+.+||+.||++|||+.++++.|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence                 000                     00000000  11112356778999999999999999999999999999998


Q ss_pred             Hh
Q 045682          306 RS  307 (309)
Q Consensus       306 ~~  307 (309)
                      ..
T Consensus       318 ~~  319 (336)
T 3g2f_A          318 MI  319 (336)
T ss_dssp             HC
T ss_pred             HH
Confidence            64

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.5e-38  Score=281.99  Aligned_cols=239  Identities=15%  Similarity=0.246  Sum_probs=176.8

Q ss_pred             CCccCceeecCCeEEEEEEe--C-C--eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeee-CCceEEEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--Q-E--RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLE-TQIPILVF  132 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~-~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv~  132 (309)
                      |...+.||+|+||.||+|.+  + +  ..||+|.+.... ....+.|.+|+.++++++||||+++++++.. ++..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            45567899999999999997  2 2  468999987643 3556789999999999999999999998754 56789999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.      .....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       171 e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~  241 (373)
T 3c1x_A          171 PYMKHGDLRNFIR------NETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARD  241 (373)
T ss_dssp             ECCTTCBHHHHHH------CTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             ECCCCCCHHHHHh------hcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccc
Confidence            9999999999986      23456899999999999999999999   89999999999999999999999999999986


Q ss_pred             cCCCc--------ccccccccccccccc------CCCcccHHHHHHHHhhc-cc------ccccccccccCCCCCCchHH
Q 045682          213 IPEGE--------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEE-DR------LNEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       213 ~~~~~--------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~g~~~~~~~~~  271 (309)
                      .....        ...+...|.+|+...      ..+.|+++..+|+++.+ ..      ..++......+.... .+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~-~p~~  320 (373)
T 3c1x_A          242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL-QPEY  320 (373)
T ss_dssp             ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCC-CCTT
T ss_pred             ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCC-CCCC
Confidence            54322        112223344444321      23556666666666652 21      112222333333322 2235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ++..+.+++.+||+.||++|||+.++++.|+++..++
T Consensus       321 ~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          321 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            6788999999999999999999999999999998764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=9.6e-38  Score=275.59  Aligned_cols=232  Identities=16%  Similarity=0.162  Sum_probs=182.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      +.|...+.||+|+||.||+|.+  ++..||+|.+.....      ...+.+.+|+.++..++||||+++++++.+.+..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            5588899999999999999999  689999999866432      13577999999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC----cEEEe
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN----VAKLF  205 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~----~~kl~  205 (309)
                      +||||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++    .+||+
T Consensus        91 lv~e~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~  160 (326)
T 2y0a_A           91 LILELVAGGELFDFLA-------EKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKII  160 (326)
T ss_dssp             EEEECCCSCBHHHHHT-------TSSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred             EEEEcCCCCCHHHHHH-------hcCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence            9999999999999986       4567999999999999999999999   89999999999999999887    89999


Q ss_pred             ecccccccCCCc---cccccccccccccccC------CCcccHHHHHHHHhhccccc------ccccccccCCCCCCc--
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSG--  268 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~--  268 (309)
                      |||++.......   ...|...|.+|+....      .+.|+++..++.++.+....      +.+.....+......  
T Consensus       161 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  240 (326)
T 2y0a_A          161 DFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY  240 (326)
T ss_dssp             CCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred             ECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccc
Confidence            999998765332   3346666666654322      24455555555555443221      222222222222221  


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ....+..+.+|+.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1234577999999999999999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=7.8e-38  Score=276.00  Aligned_cols=235  Identities=16%  Similarity=0.196  Sum_probs=178.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI------  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~------  127 (309)
                      .++|+..+.||+|+||.||+|++  +++.||||++.... ....+.+.+|+.++++++||||+++++++.+...      
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            35688899999999999999999  78999999987543 3455789999999999999999999999866442      


Q ss_pred             ---------------------------------------------------eEEEEEeccCCChhhhhhhhCCCCCCCCC
Q 045682          128 ---------------------------------------------------PILVFEYINCGSLADRIRIQHNPQPQHEP  156 (309)
Q Consensus       128 ---------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~~~~~~~~  156 (309)
                                                                         .++||||+++|+|.+++...    .....
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~  160 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR----CSLED  160 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC----CSGGG
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc----cCccc
Confidence                                                               79999999999999998632    12344


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc----------------ccc
Q 045682          157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE----------------LLT  220 (309)
Q Consensus       157 l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~----------------~~~  220 (309)
                      .++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......                ...
T Consensus       161 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (332)
T 3qd2_B          161 REHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV  237 (332)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred             hhhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence            677788999999999999999   8999999999999999999999999999998765432                223


Q ss_pred             ccccccccccccC------CCcccHHHHHHHHhhccccc----ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCC
Q 045682          221 GLRAFDLARLNED------DGYVALRDHVKKYFEEDRLN----EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVD  290 (309)
Q Consensus       221 g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~  290 (309)
                      |...|.+|+....      .+.|+++..++.++.+....    ........+..+ ......++++.+|+.+||+.||++
T Consensus       238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~  316 (332)
T 3qd2_B          238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFP-LLFTQKYPQEHMMVQDMLSPSPTE  316 (332)
T ss_dssp             -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCC-HHHHHHCHHHHHHHHHHHCSSGGG
T ss_pred             CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCC-cccccCChhHHHHHHHHccCCCCc
Confidence            5566666554322      24555565666655433211    112222222222 122355677899999999999999


Q ss_pred             CCCHHHHHH
Q 045682          291 RPTMVDVAK  299 (309)
Q Consensus       291 RPt~~~l~~  299 (309)
                      |||+.++++
T Consensus       317 Rps~~~~l~  325 (332)
T 3qd2_B          317 RPEATDIIE  325 (332)
T ss_dssp             SCCHHHHHH
T ss_pred             CCCHHHHhh
Confidence            999999985

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1.4e-38  Score=274.43  Aligned_cols=241  Identities=18%  Similarity=0.237  Sum_probs=180.9

Q ss_pred             HhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeC-CceEEEEEe
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLET-QIPILVFEY  134 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e~  134 (309)
                      ..++|...+.||+|+||.||+|.++++.||+|.+....  ..+.+.+|+.++.+++||||+++++++... +..++||||
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            34678889999999999999999999999999987653  457799999999999999999999997654 578999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++++|.+++...     ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++....
T Consensus        97 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           97 MAKGSLVDYLRSR-----GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             CTTEEHHHHHHHH-----HHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             CCCCCHHHHHHhc-----ccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            9999999998632     1234889999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCc-ccccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHHHHHH
Q 045682          215 EGE-LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAYAHLI  280 (309)
Q Consensus       215 ~~~-~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~li  280 (309)
                      ... ...+...+.+|+...      ..+.|+++..++.++. +..      ..++......+.. ...+...+.++.+++
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li  247 (278)
T 1byg_A          169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-MDAPDGCPPAVYEVM  247 (278)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC-CCCCTTCCHHHHHHH
T ss_pred             ccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-CCCcccCCHHHHHHH
Confidence            332 223334444444321      2355666666666654 321      1222222223322 222335678899999


Q ss_pred             HHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          281 FECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       281 ~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..||+.||.+|||+.++++.|+++...
T Consensus       248 ~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          248 KNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            999999999999999999999998753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2e-37  Score=269.83  Aligned_cols=241  Identities=15%  Similarity=0.248  Sum_probs=182.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe-C----CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeee-eCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-Q----ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCL-ETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~-~~~~~~l  130 (309)
                      ..|...+.||+|+||.||+|.+ .    ...||+|.+.... ....+.+.+|+.++++++||||+++++++. .++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            4577788999999999999997 1    2368999987654 344577999999999999999999999865 4567899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++.      .....+++..++.++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++
T Consensus       105 v~e~~~~~~L~~~l~------~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a  175 (298)
T 3f66_A          105 VLPYMKHGDLRNFIR------NETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA  175 (298)
T ss_dssp             EEECCTTCBHHHHHH------CTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred             EEeCCCCCCHHHHHH------hcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccc
Confidence            999999999999986      23456899999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCcc--------cccccccccccccc------CCCcccHHHHHHHHhhcc-cc------cccccccccCCCCCCch
Q 045682          211 ISIPEGEL--------LTGLRAFDLARLNE------DDGYVALRDHVKKYFEED-RL------NEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       211 ~~~~~~~~--------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~g~~~~~~~  269 (309)
                      ........        ..|...+.+|+...      ..+.|+++..++.++.+. ..      .+.......+.... .+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  254 (298)
T 3f66_A          176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL-QP  254 (298)
T ss_dssp             CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC-CC
T ss_pred             ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCC-CC
Confidence            86644321        12222344443221      224555555556555422 11      12222222232222 22


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ...+..+.+++..||+.||.+|||+.++++.|+++..++
T Consensus       255 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          255 EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            345678999999999999999999999999999998764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.6e-38  Score=285.98  Aligned_cols=238  Identities=11%  Similarity=0.053  Sum_probs=173.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHH---HHHhhccCCcceeee-------eee
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNI---VYASQMIHRCFFKLI-------GCC  122 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~l~-------g~~  122 (309)
                      ++|...+.||+|+||.||+|.+  +++.||||++...   .....+.+.+|+   .++++++||||++++       +++
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~  152 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  152 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred             ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence            5577788999999999999997  6899999998743   334567899999   555566899999998       555


Q ss_pred             eeCC-----------------ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 045682          123 LETQ-----------------IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVI  185 (309)
Q Consensus       123 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ii  185 (309)
                      ..++                 ..++||||+ +|+|.+++............+++..++.++.||+.||+|||   +.+|+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv  228 (377)
T 3byv_A          153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV  228 (377)
T ss_dssp             ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred             hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence            4443                 278999999 57999999743221122344566889999999999999999   89999


Q ss_pred             eCCCCCCCeeecCCCcEEEeecccccccCCC-ccccccccccccccccC-----------------CCcccHHHHHHHHh
Q 045682          186 FRDFKLSNILFNEENVAKLFDFSFSISIPEG-ELLTGLRAFDLARLNED-----------------DGYVALRDHVKKYF  247 (309)
Q Consensus       186 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~g~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~  247 (309)
                      ||||||+|||++.++.+||+|||+++..... ....| ..|.+|+....                 .+.|+++..++.++
T Consensus       229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell  307 (377)
T 3byv_A          229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW  307 (377)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence            9999999999999999999999999865432 23345 55555554332                 24455555555555


Q ss_pred             hccccc------ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHHHH
Q 045682          248 EEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK--KLKQMYR  306 (309)
Q Consensus       248 ~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~--~L~~l~~  306 (309)
                      .+....      ........+.      ...+.++.+|+.+||+.||++|||+.++++  .+.++..
T Consensus       308 tg~~Pf~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~  368 (377)
T 3byv_A          308 CADLPITKDAALGGSEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT  368 (377)
T ss_dssp             HSSCCC------CCSGGGGSSC------CCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred             HCCCCCcccccccchhhhhhhc------cCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHH
Confidence            443221      1122222111      134578999999999999999999999985  4554443

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=5e-38  Score=281.17  Aligned_cols=232  Identities=16%  Similarity=0.178  Sum_probs=175.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|...+.||+|+||.||++..  +++.||+|.+.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            46799999999999999999999  78999999997654 2336688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc--EEEeecccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV--AKLFDFSFSIS  212 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~a~~  212 (309)
                      +++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.  +||+|||+++.
T Consensus        98 ~~~~~L~~~l~-------~~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A           98 ASGGELYERIC-------NAGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS  167 (361)
T ss_dssp             CCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred             CCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence            99999999986       3457999999999999999999999   899999999999999987765  99999999875


Q ss_pred             cCCC---ccccccccccccccccCC-------CcccHHHHHHHHhhccccc----------ccccccccCCCCCCchHHH
Q 045682          213 IPEG---ELLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLN----------EIIDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       213 ~~~~---~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~  272 (309)
                      ....   ....|...|.+|+.....       +.|+++..++.++.+....          ..+..........+.....
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
T 3uc3_A          168 SVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRI  247 (361)
T ss_dssp             -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCC
T ss_pred             ccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCC
Confidence            4322   234466666666643332       3444555555554443221          1122222223222222245


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+|+.+||+.||.+|||+.++++
T Consensus       248 s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          248 SPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            678999999999999999999999975

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.4e-37  Score=272.04  Aligned_cols=237  Identities=20%  Similarity=0.296  Sum_probs=182.9

Q ss_pred             CCccCceeecCCeEEEEEEe------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeC--CceEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLET--QIPIL  130 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  130 (309)
                      |...+.||+|+||.||++.+      +++.||||++.... ......+.+|+.+++.++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            47888999999999998875      67899999998754 34456799999999999999999999999874  56899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++.        ...+++..++.++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++
T Consensus       113 v~e~~~~~~L~~~l~--------~~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a  181 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLP--------RHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLA  181 (318)
T ss_dssp             EECCCTTCBHHHHGG--------GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred             EEecccCCcHHHHHh--------hCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccc
Confidence            999999999999985        345999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCc-------ccccccccccccccc------CCCcccHHHHHHHHhhcccccc---------------------cc
Q 045682          211 ISIPEGE-------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE---------------------II  256 (309)
Q Consensus       211 ~~~~~~~-------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------------------~~  256 (309)
                      .......       ...|...|.+|+...      ..+.|+++..++.++.+.....                     +.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  261 (318)
T 3lxp_A          182 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT  261 (318)
T ss_dssp             EECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             ccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHH
Confidence            8775432       112222344443322      2245556666666554321110                     11


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .....+. ....+..++.++.+|+.+||+.||.+|||+.++++.|+.+.+.+
T Consensus       262 ~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          262 ELLERGE-RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             HHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHhccc-CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence            1111121 22223356688999999999999999999999999999998753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=9e-38  Score=271.24  Aligned_cols=240  Identities=18%  Similarity=0.253  Sum_probs=184.1

Q ss_pred             HhcCCCccC-ceeecCCeEEEEEEe----CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           56 ATNNYDSEK-VIMKRSFYTLYKGFC----QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        56 ~~~~~~~~~-~lg~G~~g~V~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      ..++|...+ .||+|+||.||+|.+    .+..||+|.+....  ....+.+.+|+.++..++||||+++++++ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            345677777 899999999999965    46889999987653  33457799999999999999999999999 56778


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||
T Consensus        93 ~lv~e~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg  162 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQ-------QNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFG  162 (291)
T ss_dssp             EEEEECCTTEEHHHHHH-------HCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             EEEEEeCCCCCHHHHHH-------hCcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCC
Confidence            99999999999999987       4456999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCcc-------cccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCc
Q 045682          209 FSISIPEGEL-------LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSG  268 (309)
Q Consensus       209 ~a~~~~~~~~-------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~  268 (309)
                      ++........       ..+...+.+|+...      ..+.|+++..++.++. +...      .++......+..+ ..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~~  241 (291)
T 1xbb_A          163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM-GC  241 (291)
T ss_dssp             TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-CC
T ss_pred             cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-CC
Confidence            9987654321       11223344444321      2355666666666654 3322      1122222223222 22


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +...+.++.+++..||+.||.+|||+.+|++.|+++..+
T Consensus       242 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          242 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            235668899999999999999999999999999998765

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=4.9e-38  Score=273.48  Aligned_cols=239  Identities=17%  Similarity=0.224  Sum_probs=184.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....   ....+.+.+|+.++.+++||||+++++++.+++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            35688899999999999999998  78999999985532   33456789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++.       ...++++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.
T Consensus        90 ~e~~~g~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~  159 (294)
T 4eqm_A           90 MEYIEGPTLSEYIE-------SHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAK  159 (294)
T ss_dssp             EECCCSCBHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSST
T ss_pred             EeCCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcc
Confidence            99999999999987       4457999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------cccccccCCCCCC---chHH
Q 045682          212 SIPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSCS---GKEQ  271 (309)
Q Consensus       212 ~~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~---~~~~  271 (309)
                      ......     ...|...|.+|+...      ..+.|+++..++.++.+.....      .......+..+..   .+..
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
T 4eqm_A          160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKD  239 (294)
T ss_dssp             TC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTT
T ss_pred             ccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccC
Confidence            664332     234556666555322      2356667777777665443211      1111111111111   0123


Q ss_pred             HHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRP-TMVDVAKKLKQMY  305 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RP-t~~~l~~~L~~l~  305 (309)
                      .+..+.+++.+||+.||.+|| ++.++.+.|+.+.
T Consensus       240 ~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          240 IPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            457899999999999999998 8999999888764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=6.8e-38  Score=275.12  Aligned_cols=246  Identities=13%  Similarity=0.133  Sum_probs=188.2

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee----CCce
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE----TQIP  128 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~  128 (309)
                      ...++|...+.||+|+||.||++..  +++.||+|++........+.+.+|+.++..++||||+++++++..    ....
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            3457799999999999999999998  789999999877666667789999999999999999999999873    3478


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|.+++.....   ....+++..++.++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg  179 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKD---KGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLG  179 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred             EEEEEeCCCCcHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecC
Confidence            999999999999999864321   3567999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCc-------------ccccccccccccccc---------CCCcccHHHHHHHHhhcccccc-------ccccc
Q 045682          209 FSISIPEGE-------------LLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLNE-------IIDPL  259 (309)
Q Consensus       209 ~a~~~~~~~-------------~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  259 (309)
                      ++.......             ...|...|.+|+...         ..+.|+++..++.++.+.....       .+...
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  259 (317)
T 2buj_A          180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA  259 (317)
T ss_dssp             SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH
T ss_pred             cchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH
Confidence            887653211             122345555555432         2355666666666665443211       11111


Q ss_pred             ccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          260 IMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       260 ~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      .......+.....+.++.+|+.+||+.||.+|||+.+|++.|+.+..
T Consensus       260 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          260 VQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             HHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             hhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            11122222223556889999999999999999999999999998754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.6e-37  Score=269.73  Aligned_cols=232  Identities=13%  Similarity=0.165  Sum_probs=174.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|...+.||+|+||+||+|.+  +++.||+|++....  ......+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4688889999999999999999  78999999987543  3345778999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++ ++.+++..      ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        82 ~~~~-~l~~~~~~------~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~  151 (292)
T 3o0g_A           82 FCDQ-DLKKYFDS------CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAF  151 (292)
T ss_dssp             CCSE-EHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cCCC-CHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            9986 56555531      3567999999999999999999999   899999999999999999999999999999865


Q ss_pred             CCC----ccccccccccccccccCC-------CcccHHHHHHHHhhcccc-------ccccccccc--C-----------
Q 045682          214 PEG----ELLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRL-------NEIIDPLIM--G-----------  262 (309)
Q Consensus       214 ~~~----~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--g-----------  262 (309)
                      ...    ....|...+.+|+.....       +.|+++..++.++.+...       .+.+..+..  +           
T Consensus       152 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             CSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             CCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhc
Confidence            432    123445556666543322       345555555555432211       000000000  0           


Q ss_pred             --------------CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 --------------DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 --------------~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    ..........+.++.+|+.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                          0000001134577899999999999999999999975

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.5e-38  Score=275.93  Aligned_cols=258  Identities=17%  Similarity=0.265  Sum_probs=192.8

Q ss_pred             cccHHHHHHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCCc-hhHHHHHHHHHHHhhc-cCCccee
Q 045682           47 TFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASKP-RMYDCCINNIVYASQM-IHRCFFK  117 (309)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~  117 (309)
                      ++...++....++|...+.||+|+||.||+|.+       +++.||+|.+..... .....+.+|+.++.++ +||||++
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~   95 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   95 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence            356667777788999999999999999999984       458899999977543 3446799999999999 7999999


Q ss_pred             eeeeeeeCC-ceEEEEEeccCCChhhhhhhhCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeC
Q 045682          118 LIGCCLETQ-IPILVFEYINCGSLADRIRIQHNPQ---------PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR  187 (309)
Q Consensus       118 l~g~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~  187 (309)
                      +++++...+ ..++||||+++|+|.+++.......         .....+++..++.++.|++.||.|||   +.+|+||
T Consensus        96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~  172 (316)
T 2xir_A           96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR  172 (316)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred             EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence            999987754 5899999999999999986321100         00223899999999999999999999   8999999


Q ss_pred             CCCCCCeeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-ccccc-
Q 045682          188 DFKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRLN-  253 (309)
Q Consensus       188 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~-  253 (309)
                      ||||+||+++.++.+||+|||+++......      ...|...|.+|+...      ..+.|+++..++.++. +.... 
T Consensus       173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~  252 (316)
T 2xir_A          173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  252 (316)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence            999999999999999999999998664332      122333455554321      2345566666666654 32211 


Q ss_pred             ------ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          254 ------EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       254 ------~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                            .+......+.. ...+...+.++.+++.+||+.||.+|||+.+|++.|+++.++.
T Consensus       253 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          253 GVKIDEEFCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             TCCCSHHHHHHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHhccCcc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence                  11111111221 1222345678999999999999999999999999999998763

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.9e-37  Score=269.13  Aligned_cols=239  Identities=15%  Similarity=0.192  Sum_probs=185.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC--ceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ--IPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv~  132 (309)
                      +.|...+.||+|+||.||+|.+  +++.||||++.... ....+.+.+|+.++.+++||||+++++++...+  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            5688899999999999999999  58999999987643 234567889999999999999999999998755  679999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee----cCCCcEEEeecc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF----NEENVAKLFDFS  208 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg  208 (309)
                      ||+++|+|.+++....    ....+++..++.++.|++.||.|||   +.+|+||||||+|||+    +.++.+||+|||
T Consensus        89 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPS----NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             ECCTTCBHHHHHHSGG----GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             eCCCCCCHHHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence            9999999999987221    2234999999999999999999999   8999999999999999    788889999999


Q ss_pred             cccccCCCc---cccccccccccccc--------------cCCCcccHHHHHHHHhhcccccc----------ccccccc
Q 045682          209 FSISIPEGE---LLTGLRAFDLARLN--------------EDDGYVALRDHVKKYFEEDRLNE----------IIDPLIM  261 (309)
Q Consensus       209 ~a~~~~~~~---~~~g~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  261 (309)
                      +++......   ...|...+.+|+..              ...+.|+++..++.++.+.....          ++.....
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  241 (319)
T 4euu_A          162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (319)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred             CceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence            998765443   23355555555432              23466777777777765532211          1111111


Q ss_pred             CC-----------------------CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          262 GD-----------------------RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       262 g~-----------------------~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      +.                       .+.......+..+.+++.+||+.||++|||+.|+++...+
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence            11                       1112335778889999999999999999999999987765

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.4e-38  Score=276.67  Aligned_cols=232  Identities=17%  Similarity=0.129  Sum_probs=176.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||+||+|.+  +++.||||++....  ......+..|+..+..+ +||||+++++++.+++..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            5688889999999999999999  78999999986643  23334566677666666 9999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+ +++|.+++...      ...+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus       137 e~~-~~~L~~~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~  206 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAW------GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE  206 (311)
T ss_dssp             ECC-CCBHHHHHHHH------CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred             ecc-CCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeee
Confidence            999 56999998632      456999999999999999999999   89999999999999999999999999999877


Q ss_pred             cCCCc---cccccccccccccccC-----CCcccHHHHHHHHhhccccc---ccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNED-----DGYVALRDHVKKYFEEDRLN---EIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                      .....   ...|...|.+|+...+     .+.|+++..+++++.+....   ...+....+..+...+...+.++.+|+.
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  286 (311)
T 3p1a_A          207 LGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLV  286 (311)
T ss_dssp             CC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHH
T ss_pred             cccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHH
Confidence            64432   3345666666664332     24455555556655543221   1112222232222222345688999999


Q ss_pred             HcccCCCCCCCCHHHHHH
Q 045682          282 ECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~  299 (309)
                      .||+.||++|||+.++++
T Consensus       287 ~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          287 MMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHSCSSTTTSCCHHHHHT
T ss_pred             HHcCCChhhCcCHHHHHh
Confidence            999999999999999975

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=9.7e-38  Score=276.59  Aligned_cols=230  Identities=17%  Similarity=0.203  Sum_probs=184.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|..  +++.||+|.+...   .......+.+|+.++..++||||+++++++.+.+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            5688899999999999999998  7899999998653   2234567889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus        85 E~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~  154 (337)
T 1o6l_A           85 EYANGGELFFHLS-------RERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE  154 (337)
T ss_dssp             ECCTTCBHHHHHH-------HHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             eCCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhh
Confidence            9999999999986       4467899999999999999999999   89999999999999999999999999999986


Q ss_pred             cCCC----ccccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEG----ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~----~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....    ....|...|.+|+....      .+.|+++..+++++.+...      .++...+..+....  +...+.++
T Consensus       155 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~--p~~~s~~~  232 (337)
T 1o6l_A          155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEA  232 (337)
T ss_dssp             SCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTSCHHH
T ss_pred             cccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHH
Confidence            4321    24456777777765432      3456666666666554322      22233333333322  23456889


Q ss_pred             HHHHHHcccCCCCCCC-----CHHHHHH
Q 045682          277 AHLIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      .+|+.+||+.||.+||     ++.+|++
T Consensus       233 ~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          233 KSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            9999999999999999     8888864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-37  Score=266.75  Aligned_cols=240  Identities=15%  Similarity=0.215  Sum_probs=185.4

Q ss_pred             cCCCccC-ceeecCCeEEEEEEe----CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEK-VIMKRSFYTLYKGFC----QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~-~lg~G~~g~V~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...+ .||+|+||.||+|.+    ++..||+|.+.... ....+.+.+|+.++..++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            4455555 899999999999986    56889999998753 34567799999999999999999999999 55678999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++.      .....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.
T Consensus        88 ~e~~~~~~L~~~l~------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  158 (287)
T 1u59_A           88 MEMAGGGPLHKFLV------GKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSK  158 (287)
T ss_dssp             EECCTTEEHHHHHT------TCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             EEeCCCCCHHHHHH------hCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECccccee
Confidence            99999999999985      23466999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCc-------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          212 SIPEGE-------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       212 ~~~~~~-------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      ......       ...|...|.+|+...      ..+.|+++..++.++. +...      .++...+..+..+. .+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~  237 (287)
T 1u59_A          159 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME-CPPE  237 (287)
T ss_dssp             ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC-CCTT
T ss_pred             eeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCC-CCCC
Confidence            764332       112233344444321      2345666666666664 3321      12222222333222 2235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .+.++.+++..||+.||++|||+.++++.|+++..+.
T Consensus       238 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  274 (287)
T 1u59_A          238 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  274 (287)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            6788999999999999999999999999999998763

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-37  Score=278.90  Aligned_cols=234  Identities=15%  Similarity=0.187  Sum_probs=184.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .+.|...+.||+|+||.||+|..  +++.||+|.+..........+.+|+.++..++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            46788999999999999999998  7899999999876555567799999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC--CCcEEEeecccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE--ENVAKLFDFSFSIS  212 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~  212 (309)
                      +++|+|.+++.      .....+++..++.++.||+.||.|||   +.+|+||||||+|||++.  ++.+||+|||++..
T Consensus       130 ~~gg~L~~~l~------~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          130 LSGGELFDRIA------AEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATK  200 (387)
T ss_dssp             CCCCBHHHHTT------CTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             CCCCcHHHHHH------hhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEeccccee
Confidence            99999999985      13347999999999999999999999   899999999999999974  57899999999988


Q ss_pred             cCCCc---cccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCC--CchHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSC--SGKEQQLQA  275 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~--~~~~~~~~~  275 (309)
                      .....   ...|...|.+|+....      .+.|+++..++.++.+...      .+.+..+..+....  ......+.+
T Consensus       201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  280 (387)
T 1kob_A          201 LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE  280 (387)
T ss_dssp             CCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHH
T ss_pred             cCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHH
Confidence            76543   3456666766665432      2345555555555544322      12222222222211  112245678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+..||+.||.+|||+.++++
T Consensus       281 ~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          281 AKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhh
Confidence            999999999999999999999975

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.2e-37  Score=278.77  Aligned_cols=234  Identities=18%  Similarity=0.208  Sum_probs=186.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||+|.+....  ....+.+.+|+.++..++||||+++++++.+++..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            356799999999999999999998  78999999997653  34456789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC---CcEEEeecc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE---NVAKLFDFS  208 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg  208 (309)
                      |||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.+   +.+||+|||
T Consensus       107 ~e~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG  176 (362)
T 2bdw_A          107 FDLVTGGELFEDIV-------AREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFG  176 (362)
T ss_dssp             ECCCCSCBHHHHHT-------TCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             EecCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecC
Confidence            99999999999986       4567999999999999999999999   8999999999999999765   459999999


Q ss_pred             cccccCCCc---cccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCC--chHH
Q 045682          209 FSISIPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCS--GKEQ  271 (309)
Q Consensus       209 ~a~~~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~--~~~~  271 (309)
                      ++.......   ...|...|.+|+....      .+.|+++..++.++.+...      .++...+..+....+  ....
T Consensus       177 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  256 (362)
T 2bdw_A          177 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT  256 (362)
T ss_dssp             TCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGG
T ss_pred             cceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccC
Confidence            998775443   2456666666664332      2445566666666554322      223333334433322  2235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+.++.+|+.+||+.||++|||+.++++
T Consensus       257 ~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          257 VTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            5788999999999999999999999874

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.8e-37  Score=270.36  Aligned_cols=241  Identities=20%  Similarity=0.285  Sum_probs=179.0

Q ss_pred             cCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      ++|+..+.||+|+||.||+|.+.++.||+|.+...  ...+.+.+|+.++++++||||+++++++.+  ..++||||+++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~   83 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG   83 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence            56788899999999999999999999999998654  345779999999999999999999998874  48999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc-EEEeecccccccCCC
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV-AKLFDFSFSISIPEG  216 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~-~kl~Dfg~a~~~~~~  216 (309)
                      |+|.+++...    .....+++..++.++.|++.||.|||+....+|+||||||+|||++.++. +||+|||++......
T Consensus        84 ~~L~~~l~~~----~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~  159 (307)
T 2eva_A           84 GSLYNVLHGA----EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH  159 (307)
T ss_dssp             CBHHHHHHCS----SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred             CCHHHHHhcc----CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence            9999998621    11234788999999999999999999321189999999999999998886 799999999765432


Q ss_pred             -cccccccccccccccc------CCCcccHHHHHHHHhhcccccc--------cccccccCCCCCCchHHHHHHHHHHHH
Q 045682          217 -ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE--------IIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       217 -~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                       ....|...|.+|+...      ..+.|+++..++.++.+.....        +......+..+. .+...+..+.+|+.
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~  238 (307)
T 2eva_A          160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-LIKNLPKPIESLMT  238 (307)
T ss_dssp             -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCC-CBTTCCHHHHHHHH
T ss_pred             cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCC-cccccCHHHHHHHH
Confidence             2234555565555432      2345566666666655443221        111112222222 22355678999999


Q ss_pred             HcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          282 ECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +||+.||.+|||+.++++.|+.+.+.
T Consensus       239 ~~l~~dp~~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          239 RCWSKDPSQRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred             HHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.9e-37  Score=271.89  Aligned_cols=233  Identities=15%  Similarity=0.160  Sum_probs=174.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||+||+|.+ +++.||+|++....  ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            46788999999999999999999 88999999987543  2334678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++ +|.+++.      .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus       100 ~~~~-~l~~~~~------~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A          100 FMEK-DLKKVLD------ENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAF  169 (311)
T ss_dssp             CCSE-EHHHHHH------TCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred             CCCC-CHHHHHH------hccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceec
Confidence            9985 8888875      13456999999999999999999999   899999999999999999999999999999875


Q ss_pred             CCC----ccccccccccccccccC-------CCcccHHHHHHHHhhcccccc------ccccccc--CCCC---------
Q 045682          214 PEG----ELLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNE------IIDPLIM--GDRS---------  265 (309)
Q Consensus       214 ~~~----~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--g~~~---------  265 (309)
                      ...    ....|...|.+|+....       .+.|+++..++.++.+.....      .+..+..  +...         
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  249 (311)
T 3niz_A          170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE  249 (311)
T ss_dssp             TSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTT
T ss_pred             CCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhc
Confidence            422    12344555655554332       234555555555554432111      0000000  0000         


Q ss_pred             -------------CCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          266 -------------CSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       266 -------------~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                   ...    ....+.++.+|+.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                         000    0123467899999999999999999999985

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3e-37  Score=273.18  Aligned_cols=240  Identities=19%  Similarity=0.251  Sum_probs=180.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--C----CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--Q----ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ..|...+.||+|+||.||+|.+  +    +..||+|.+.... ......+.+|+.++..++||||+++++++...+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            4566678999999999999988  2    2459999997653 3345678999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++
T Consensus       124 v~e~~~~~~L~~~l~~------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  194 (333)
T 1mqb_A          124 ITEYMENGALDKFLRE------KDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLS  194 (333)
T ss_dssp             EEECCTTEEHHHHHHH------TTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             EEeCCCCCcHHHHHHh------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcc
Confidence            9999999999999862      2457999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCcc-------cccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchH
Q 045682          211 ISIPEGEL-------LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       211 ~~~~~~~~-------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~  270 (309)
                      ........       ..+...|.+|+...      ..+.|+++..++.++. +...      .+++..+..+.... .+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~-~~~  273 (333)
T 1mqb_A          195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP-TPM  273 (333)
T ss_dssp             ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-CCT
T ss_pred             hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCC-Ccc
Confidence            87643321       11222344444322      2345566666666554 3211      22333333332222 223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .++..+.+|+.+||+.||.+|||+.+|++.|+++...
T Consensus       274 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            5668899999999999999999999999999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.1e-37  Score=267.62  Aligned_cols=240  Identities=13%  Similarity=0.099  Sum_probs=183.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+....  ....+.+|+.++..+ +|+|++++++++..+...++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            35688999999999999999997  88999999986543  234578899999999 89999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc-----EEEeecc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV-----AKLFDFS  208 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg  208 (309)
                      |+ +++|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.     +||+|||
T Consensus        87 ~~-~~~L~~~l~~------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg  156 (298)
T 1csn_A           87 LL-GPSLEDLLDL------CGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  156 (298)
T ss_dssp             CC-CCBHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             ec-CCCHHHHHHH------hccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence            99 8899999862      2346999999999999999999999   999999999999999987776     9999999


Q ss_pred             cccccCCC-----------ccccccccccccccccC------CCcccHHHHHHHHhhcccccccc---------cccccC
Q 045682          209 FSISIPEG-----------ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEII---------DPLIMG  262 (309)
Q Consensus       209 ~a~~~~~~-----------~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g  262 (309)
                      ++......           ....|...|.+|+....      .+.|+++..++.++.+.....-.         .....+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (298)
T 1csn_A          157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK  236 (298)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence            99866432           23345566666654332      23444444445444433221110         000000


Q ss_pred             CCCCCch---HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          263 DRSCSGK---EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       263 ~~~~~~~---~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ..+...+   ...+.++.+|+..||+.||++|||+.+|++.|+++.+.+
T Consensus       237 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          237 KQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             HHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence            0000000   133578999999999999999999999999999998765

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=4.6e-38  Score=277.48  Aligned_cols=238  Identities=18%  Similarity=0.247  Sum_probs=179.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe----EEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER----LISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++|...+.||+|+||.||+|.+  ++.    +||+|.+.... ......+.+|+.++.+++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            5688889999999999999998  444    38888875543 233456788999999999999999999886 456899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus        92 v~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a  162 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQ------HRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVA  162 (325)
T ss_dssp             EEECCTTCBSHHHHHS------SGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGG
T ss_pred             EEEeCCCCCHHHHHHH------ccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcc
Confidence            9999999999999861      2457999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          211 ISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      +......      ...|...|.+++...      ..+.|+++..++.++. +...      .++.+....+.... .+..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~  241 (325)
T 3kex_A          163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLA-QPQI  241 (325)
T ss_dssp             GGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCC-CCTT
T ss_pred             cccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC-CCCc
Confidence            8764432      122333344444322      2345666666666554 3221      22222222222222 2224


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ++.++.+|+..||+.||.+|||+.++++.|+.+.+
T Consensus       242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          242 CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            55678999999999999999999999999998864

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2e-37  Score=295.67  Aligned_cols=233  Identities=18%  Similarity=0.254  Sum_probs=182.1

Q ss_pred             CceeecCCeEEEEEEe----CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC----QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||.||+|.+    .+..||||+++...  ....+.+.+|+.++.+++||||+++++++.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            3699999999999976    45789999997642  3445789999999999999999999999964 558999999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      |+|.+++.       ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus       454 g~L~~~l~-------~~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          454 GPLNKYLQ-------QNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             EEHHHHHH-------HCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred             CCHHHHHh-------hCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence            99999996       4567999999999999999999999   8999999999999999999999999999998764432


Q ss_pred             -------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHHHHHHHH
Q 045682          218 -------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       218 -------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                             ...+...|.+|+...      ..+.|+++..+++++. +...      .++...+..+.... .+..++.++.
T Consensus       524 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~-~p~~~~~~l~  602 (635)
T 4fl3_A          524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG-CPAGCPREMY  602 (635)
T ss_dssp             -----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-CCTTCCHHHH
T ss_pred             cccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCCHHHH
Confidence                   111223344444322      2355666666666664 3221      22333333443332 2336678999


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      +|+..||+.||++|||+.+|++.|+++..++
T Consensus       603 ~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l  633 (635)
T 4fl3_A          603 DLMNLCWTYDVENRPGFAAVELRLRNYYYDV  633 (635)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999998764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1e-37  Score=275.85  Aligned_cols=253  Identities=15%  Similarity=0.194  Sum_probs=188.8

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEe--CC-----eEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeee
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFC--QE-----RLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCC  122 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~  122 (309)
                      +++...++|...+.||+|+||.||+|.+  ++     ..||+|.+.... ....+.+.+|+.++..+ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            3455668899999999999999999998  33     479999997654 33456799999999999 899999999999


Q ss_pred             eeCCceEEEEEeccCCChhhhhhhhCCC-------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCee
Q 045682          123 LETQIPILVFEYINCGSLADRIRIQHNP-------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL  195 (309)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nil  195 (309)
                      ..++..++||||+++|+|.+++......       ......+++..++.++.|++.||.|||   +.+|+||||||+|||
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEE
Confidence            9999999999999999999998643110       001346899999999999999999999   899999999999999


Q ss_pred             ecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc-c-----ccc
Q 045682          196 FNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL-N-----EII  256 (309)
Q Consensus       196 l~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~-~-----~~~  256 (309)
                      ++.++.+||+|||++.......      ...|...|.+|+...      ..+.|+++..++.++. +... .     ..+
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~  276 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF  276 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred             ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence            9999999999999998653322      112223344444321      2345566666666654 3211 1     111


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ............+...+..+.+|+..||+.||.+|||+.+|++.|+++...
T Consensus       277 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          277 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            111111122222234567899999999999999999999999999988764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.4e-37  Score=268.02  Aligned_cols=233  Identities=19%  Similarity=0.175  Sum_probs=185.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|...+.||+|+||.||+|.+  ++..||+|++........+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            45688899999999999999999  6789999998776555667899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee---cCCCcEEEeeccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSI  211 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~  211 (309)
                      +++++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||||+||++   +.++.+||+|||++.
T Consensus        88 ~~~~~L~~~~~-------~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~  157 (277)
T 3f3z_A           88 CTGGELFERVV-------HKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA  157 (277)
T ss_dssp             CCSCBHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             cCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence            99999999986       3456999999999999999999999   8999999999999999   788999999999998


Q ss_pred             ccCCCc---cccccccccccccc-----cCCCcccHHHHHHHHhhcccc------cccccccccCCCCCCch--HHHHHH
Q 045682          212 SIPEGE---LLTGLRAFDLARLN-----EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGK--EQQLQA  275 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~--~~~~~~  275 (309)
                      ......   ...|...+.+|+..     ...+.|+++..++.++.+...      .+.......+....+..  ...+..
T Consensus       158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (277)
T 3f3z_A          158 RFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQ  237 (277)
T ss_dssp             ECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHH
T ss_pred             eccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHH
Confidence            765433   23355555555432     233556666666666554322      22233333343333221  134678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||+.||.+|||+.++++
T Consensus       238 ~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          238 AESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999999974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.6e-37  Score=270.66  Aligned_cols=232  Identities=19%  Similarity=0.184  Sum_probs=174.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|++.....  ...+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            5688899999999999999999  689999999866532  334668899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++...
T Consensus        83 ~~~~~~l~~~~~-------~~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  152 (311)
T 4agu_A           83 YCDHTVLHELDR-------YQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLL  152 (311)
T ss_dssp             CCSEEHHHHHHH-------TSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             eCCCchHHHHHh-------hhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhc
Confidence            999999999976       5567999999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCc----ccccccccccccccc-------CCCcccHHHHHHHHhhcccccccc------c-------------------
Q 045682          214 PEGE----LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEII------D-------------------  257 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~-------------------  257 (309)
                      ....    ...|...+.+|+...       ..+.|+++..++.++.+.....-.      .                   
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (311)
T 4agu_A          153 TGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST  232 (311)
T ss_dssp             C------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHT
T ss_pred             cCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccc
Confidence            4322    223444455554322       224455555556555443211000      0                   


Q ss_pred             -ccccCCC-CCC---c-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 -PLIMGDR-SCS---G-----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 -~~~~g~~-~~~---~-----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       ....+.. +..   .     ....+.++.+|+..||+.||.+|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence             0000000 000   0     0134567899999999999999999999974

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.5e-37  Score=273.24  Aligned_cols=239  Identities=15%  Similarity=0.131  Sum_probs=182.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||.||+|..  +++.||||.+.....  ...+.+|+.++..+ +||||+++++++..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            36788899999999999999997  889999999875532  24588999999999 99999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc-----EEEeecc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV-----AKLFDFS  208 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg  208 (309)
                      |+ +++|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.     +||+|||
T Consensus        86 ~~-~~~L~~~~~~------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg  155 (330)
T 2izr_A           86 LL-GPSLEDLFDL------CDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA  155 (330)
T ss_dssp             CC-CCBHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred             eC-CCCHHHHHHH------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence            99 8899999862      2467999999999999999999999   899999999999999998887     9999999


Q ss_pred             cccccCCC-----------ccccccccccccccccC------CCcccHHHHHHHHhhccccccc---------ccccccC
Q 045682          209 FSISIPEG-----------ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEI---------IDPLIMG  262 (309)
Q Consensus       209 ~a~~~~~~-----------~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g  262 (309)
                      +++.....           ....|...|.+|+....      .+.|+++..++.++.+.....-         +..+..+
T Consensus       156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~  235 (330)
T 2izr_A          156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT  235 (330)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH
T ss_pred             cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh
Confidence            99865332           23456666666664433      2344555555555443322111         0111000


Q ss_pred             CCCCCch---HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          263 DRSCSGK---EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       263 ~~~~~~~---~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ..+.+..   ...+ ++.+|+..||+.||.+||++.+|.+.|+++.+..
T Consensus       236 ~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          236 KRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            0000000   0123 8999999999999999999999999999987653

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.6e-37  Score=272.77  Aligned_cols=246  Identities=20%  Similarity=0.235  Sum_probs=183.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEE--EEEEecCC-CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLI--SVMKFDAS-KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~v--avK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...+.||+|+||.||+|.+  ++..+  |+|.+... .......+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            5688899999999999999998  66644  99988754 233446789999999999 999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCC---------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          132 FEYINCGSLADRIRIQHN---------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~---------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      |||+++|+|.+++.....         .......+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence            999999999999862210         0012347999999999999999999999   8999999999999999999999


Q ss_pred             EEeecccccccCCC---ccccccccccccccc------cCCCcccHHHHHHHHhh-cccc------cccccccccCCCCC
Q 045682          203 KLFDFSFSISIPEG---ELLTGLRAFDLARLN------EDDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSC  266 (309)
Q Consensus       203 kl~Dfg~a~~~~~~---~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~  266 (309)
                      ||+|||+++.....   ....+...+.+|+..      ...+.|+++..++.++. +...      .++......+... 
T Consensus       182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~-  260 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL-  260 (327)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCC-
T ss_pred             EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCC-
Confidence            99999998744321   122233334444422      22355666666666654 3221      2223333333222 


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..+...+.++.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus       261 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          261 EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            22235568899999999999999999999999999998764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.5e-37  Score=270.45  Aligned_cols=232  Identities=18%  Similarity=0.194  Sum_probs=180.3

Q ss_pred             cCCCc-cCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDS-EKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~-~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +.|.. .+.||+|+||.||+|..  +++.||||.+..........+.+|+.++.++ +||||+++++++.+++..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            45766 47899999999999998  7899999999776656667899999999996 89999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc---EEEeecccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV---AKLFDFSFS  210 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~a  210 (309)
                      |+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.   +||+|||++
T Consensus        92 ~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~  161 (316)
T 2ac3_A           92 KMRGGSILSHIH-------KRRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLG  161 (316)
T ss_dssp             CCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred             cCCCCcHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence            999999999987       3457899999999999999999999   899999999999999988776   999999998


Q ss_pred             cccCCCc-----------cccccccccccccc-----------cCCCcccHHHHHHHHhhcccccc--------------
Q 045682          211 ISIPEGE-----------LLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLNE--------------  254 (309)
Q Consensus       211 ~~~~~~~-----------~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~--------------  254 (309)
                      .......           ...|...|.+|+..           ...+.|+++..++.++.+.....              
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  241 (316)
T 2ac3_A          162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA  241 (316)
T ss_dssp             C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred             cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence            7653211           22356666665532           23466777777777765543221              


Q ss_pred             -------cccccccCCCCCCch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          255 -------IIDPLIMGDRSCSGK--EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       255 -------~~~~~~~g~~~~~~~--~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                             +...+..+....+..  ...+.++.+|+.+||+.||.+|||+.++++
T Consensus       242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence                   122222233322211  134578999999999999999999999986

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=3.9e-37  Score=278.04  Aligned_cols=235  Identities=13%  Similarity=0.142  Sum_probs=178.4

Q ss_pred             hcCCCccCceeec--CCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           57 TNNYDSEKVIMKR--SFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G--~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .++|...+.||+|  +||.||+|.+  +++.||||++....  ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4679999999999  9999999999  68999999987643  3445678899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++...     ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       104 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~  175 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTH-----FMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSN  175 (389)
T ss_dssp             EEECCTTCBHHHHHHHT-----CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred             EEEccCCCCHHHHHhhh-----cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccc
Confidence            99999999999998632     2356999999999999999999999   899999999999999999999999999987


Q ss_pred             cccCCC-----------ccccccccccccccccC--------CCcccHHHHHHHHhhccccc------ccccccccCCCC
Q 045682          211 ISIPEG-----------ELLTGLRAFDLARLNED--------DGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRS  265 (309)
Q Consensus       211 ~~~~~~-----------~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~  265 (309)
                      ......           ....|..+|.+|+....        .+.|+++..++.++.+....      +.+.....+..+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  255 (389)
T 3gni_B          176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVP  255 (389)
T ss_dssp             EECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------
T ss_pred             eeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC
Confidence            644221           12345555666654332        24455555656555433211      111111111110


Q ss_pred             --------------------------------------------CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          266 --------------------------------------------CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       266 --------------------------------------------~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                                                  .+.+...+.++.+|+.+||+.||++|||+.++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                                                        0011234567999999999999999999999974

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.8e-37  Score=273.62  Aligned_cols=231  Identities=17%  Similarity=0.178  Sum_probs=183.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||.+.....        .....+.+|+.++.+++||||+++++++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            46789999999999999999998  889999999876531        12345778999999999999999999999999


Q ss_pred             ceEEEEEeccCC-ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          127 IPILVFEYINCG-SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       127 ~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ..++||||+.+| +|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~  172 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFID-------RHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLI  172 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHH-------TCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             EEEEEEEeCCCCccHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEe
Confidence            999999999777 9999987       5567999999999999999999999   8999999999999999999999999


Q ss_pred             ecccccccCCCc---cccccccccccccccCC-------CcccHHHHHHHHhhcccccccccccccCCCCCCchHHHHHH
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      |||++.......   ...|...|.+|+.....       +.|+++..++.++.+.....-..........  .+...+.+
T Consensus       173 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~--~~~~~~~~  250 (335)
T 3dls_A          173 DFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIH--PPYLVSKE  250 (335)
T ss_dssp             CCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCC--CSSCCCHH
T ss_pred             ecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccC--CCcccCHH
Confidence            999998765543   34466677766654332       3455555555555444332222222222211  12235678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+..||+.||++|||+.++++
T Consensus       251 l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          251 LMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999999986

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.9e-37  Score=267.67  Aligned_cols=232  Identities=17%  Similarity=0.142  Sum_probs=174.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|...+.||+|+||.||+|.. +++.||+|++....  ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            4688889999999999999999 78999999986653  22346788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++ +|.+++..      ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        82 ~~~-~l~~~~~~------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A           82 LDQ-DLKKLLDV------CEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG  151 (288)
T ss_dssp             CSE-EHHHHHHT------STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             cCC-CHHHHHHh------cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence            986 99999862      2467999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CC----ccccccccccccccccC-------CCcccHHHHHHHHhhccccccc------cccc------------------
Q 045682          215 EG----ELLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEI------IDPL------------------  259 (309)
Q Consensus       215 ~~----~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~~------------------  259 (309)
                      ..    ....|...|.+|+....       .+.|+++..++.++.+.....-      +...                  
T Consensus       152 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (288)
T 1ob3_A          152 IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL  231 (288)
T ss_dssp             C---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             ccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcc
Confidence            22    12234555555554322       2445555555555544322110      0000                  


Q ss_pred             ------ccCCCCCC---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 ------IMGDRSCS---GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ------~~g~~~~~---~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                            .....+.+   .....+.++.+|+.+||+.||++|||+.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                  00000000   00134577899999999999999999999975

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.3e-37  Score=273.24  Aligned_cols=239  Identities=18%  Similarity=0.244  Sum_probs=178.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCe----EEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QER----LISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      .++|...+.||+|+||.||+|.+  +++    +||+|.+... .......+.+|+.++..++||||+++++++..+. .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            36788899999999999999998  444    4688877554 3445678999999999999999999999998765 88


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +|+||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        93 ~v~~~~~~g~L~~~l~~------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~  163 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVRE------HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             EEECCCSSCBHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC
T ss_pred             EEEEecCCCcHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcc
Confidence            99999999999999862      2456999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchH
Q 045682          210 SISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       210 a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~  270 (309)
                      ++......      ...+...|.+|+...      ..+.|+++..++.++. +...      .++......+... ..+.
T Consensus       164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~  242 (327)
T 3lzb_A          164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL-PQPP  242 (327)
T ss_dssp             ----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-CCCT
T ss_pred             eeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-CCCc
Confidence            98764322      112222344444321      2345666666666554 3221      1222222222222 2233


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      .++.++.+|+..||+.||.+|||+.++++.|+.+..
T Consensus       243 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          243 ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            566789999999999999999999999999999874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.9e-37  Score=277.70  Aligned_cols=243  Identities=14%  Similarity=0.128  Sum_probs=176.5

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-C------CeEEEEEEecCCCchhH-----------HHHHHHHHHHhhccCCccee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-Q------ERLISVMKFDASKPRMY-----------DCCINNIVYASQMIHRCFFK  117 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-~------~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~  117 (309)
                      ..++|...+.||+|+||.||+|.+ .      ++.||||.+........           ..+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            345799999999999999999998 2      37899999876542111           12344556667778999999


Q ss_pred             eeeeeeeC----CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCC
Q 045682          118 LIGCCLET----QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSN  193 (309)
Q Consensus       118 l~g~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~N  193 (309)
                      +++++...    ...++||||+ +++|.+++..      ....+++..++.++.||+.||.|||   +.+|+||||||+|
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~------~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~N  182 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA------NAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASN  182 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH------TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGG
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHH
Confidence            99999774    4489999999 8899999862      3467999999999999999999999   8999999999999


Q ss_pred             eeec--CCCcEEEeecccccccCCCc-----------cccccccccccccccCC------CcccHHHHHHHHhhcccccc
Q 045682          194 ILFN--EENVAKLFDFSFSISIPEGE-----------LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRLNE  254 (309)
Q Consensus       194 ill~--~~~~~kl~Dfg~a~~~~~~~-----------~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  254 (309)
                      ||++  .++.+||+|||+++......           ...|...|.+|+.....      +.|+++..++.++.+.....
T Consensus       183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~  262 (364)
T 3op5_A          183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE  262 (364)
T ss_dssp             EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            9999  88999999999997664332           22366666666654332      34455555555544332111


Q ss_pred             c-c-cc-----cccCCCCCC--------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          255 I-I-DP-----LIMGDRSCS--------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       255 ~-~-~~-----~~~g~~~~~--------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      - . +.     ...+..+..        ....++.++.+++..||+.+|.+||++.+|++.|+++.+.+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~  331 (364)
T 3op5_A          263 DNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI  331 (364)
T ss_dssp             GGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence            0 0 00     000000000        00122578999999999999999999999999999998764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=4.2e-37  Score=274.21  Aligned_cols=237  Identities=15%  Similarity=0.157  Sum_probs=182.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-----CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-----KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      .+.|...+.||+|+||.||+|.+  +++.||+|.+...     .....+.+.+|+.++..++||||+++++++.+++..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            35688899999999999999998  7899999998542     1224577999999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc---EEEee
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV---AKLFD  206 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~---~kl~D  206 (309)
                      +||||+++|+|.+++.....   ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.   +||+|
T Consensus       103 lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~D  176 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRAD---AGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGG  176 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECC
T ss_pred             EEEeCCCCCCHHHHHHHhcc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEec
Confidence            99999999999988753211   2346899999999999999999999   899999999999999986654   99999


Q ss_pred             cccccccCCCc----cccccccccccccccC------CCcccHHHHHHHHhhcccc-----cccccccccCCCCCCch--
Q 045682          207 FSFSISIPEGE----LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL-----NEIIDPLIMGDRSCSGK--  269 (309)
Q Consensus       207 fg~a~~~~~~~----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~~~--  269 (309)
                      ||++.......    ...|...|.+|+....      .+.|+++..++.++.+...     .+++..+..+.......  
T Consensus       177 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~  256 (351)
T 3c0i_A          177 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQW  256 (351)
T ss_dssp             CTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHH
T ss_pred             CcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCcccc
Confidence            99998775543    2346666666664332      2445555555555544322     12233333343333221  


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...+.++.+|+.+||+.||++|||+.++++
T Consensus       257 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          257 SHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            134678999999999999999999999974

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.7e-37  Score=277.51  Aligned_cols=228  Identities=16%  Similarity=0.132  Sum_probs=175.0

Q ss_pred             cCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccCCCh
Q 045682           63 EKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      .+.||+|+||.||+|..  +++.||+|.+........+.+.+|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            56799999999999998  7899999999887656667899999999999999999999999999999999999999999


Q ss_pred             hhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee--cCCCcEEEeecccccccCCCc-
Q 045682          141 ADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF--NEENVAKLFDFSFSISIPEGE-  217 (309)
Q Consensus       141 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill--~~~~~~kl~Dfg~a~~~~~~~-  217 (309)
                      .+++..      ....+++..++.++.||+.||.|||   +.+|+||||||+|||+  +.++.+||+|||+++...... 
T Consensus       174 ~~~l~~------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~  244 (373)
T 2x4f_A          174 FDRIID------ESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK  244 (373)
T ss_dssp             HHHHHH------TGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred             HHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence            999852      3456999999999999999999999   8999999999999999  567899999999998765443 


Q ss_pred             --cccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCC--chHHHHHHHHHHHH
Q 045682          218 --LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCS--GKEQQLQAYAHLIF  281 (309)
Q Consensus       218 --~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~--~~~~~~~~l~~li~  281 (309)
                        ...|...|.+|+....      .+.|+++..++.++.+...      .+.+..+..+.....  .....+.++.+|+.
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  324 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS  324 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred             cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence              2346666666664322      2445555555555544322      122223332322221  11245688999999


Q ss_pred             HcccCCCCCCCCHHHHHH
Q 045682          282 ECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~  299 (309)
                      .||+.||.+|||+.++++
T Consensus       325 ~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          325 KLLIKEKSWRISASEALK  342 (373)
T ss_dssp             TTSCSSGGGSCCHHHHHH
T ss_pred             HHcCCChhhCCCHHHHhc
Confidence            999999999999999986

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=3.1e-37  Score=271.25  Aligned_cols=238  Identities=14%  Similarity=0.152  Sum_probs=165.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46788899999999999999998  68999999987643 3344678899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |++ |+|.+++..... ......+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        84 ~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTV-GNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             CCC-CBHHHHHHHHHS-SSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             ecC-CCHHHHHHhccc-cccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            998 599999864321 122356899999999999999999999   899999999999999999999999999999875


Q ss_pred             CCC----ccccccccccccccccC-------CCcccHHHHHHHHhhcccccc------ccccc-----------------
Q 045682          214 PEG----ELLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNE------IIDPL-----------------  259 (309)
Q Consensus       214 ~~~----~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~~-----------------  259 (309)
                      ...    ....|...|.+|+....       .+.|+++..++.++.+.....      .+..+                 
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  238 (317)
T 2pmi_A          159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK  238 (317)
T ss_dssp             TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred             CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence            422    12344555655554322       244555556666554432210      00000                 


Q ss_pred             -------ccCCCCCC--------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 -------IMGDRSCS--------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 -------~~g~~~~~--------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                             .....+..        .....+.++.+|+.+||+.||++|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                   00000000        00123467999999999999999999999874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=279.45  Aligned_cols=229  Identities=15%  Similarity=0.207  Sum_probs=183.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5688899999999999999998  78999999986532   234567889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+.+|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        95 e~~~gg~L~~~l~-------~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~  164 (384)
T 4fr4_A           95 DLLLGGDLRYHLQ-------QNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM  164 (384)
T ss_dssp             CCCTTEEHHHHHH-------TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ecCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence            9999999999987       5667999999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCc---ccccccccccccccc---------CCCcccHHHHHHHHhhcccccc---------cccccccCCCCCCchHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLNE---------IIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~  271 (309)
                      .....   ...|...|.+|+...         ..+.|+++..++.++.+.....         ++.........  .+..
T Consensus       165 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~p~~  242 (384)
T 4fr4_A          165 LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT--YPSA  242 (384)
T ss_dssp             CCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC--CCTT
T ss_pred             ccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC--CCCc
Confidence            65432   455777777776542         2345666666666665543221         11111111111  1234


Q ss_pred             HHHHHHHHHHHcccCCCCCCCC-HHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPT-MVDVA  298 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt-~~~l~  298 (309)
                      .+.++.+|+..||+.||.+||+ +.+|.
T Consensus       243 ~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          243 WSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             CCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            5688999999999999999998 66654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.7e-37  Score=268.06  Aligned_cols=241  Identities=20%  Similarity=0.299  Sum_probs=176.4

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ...++|...+.||+|+||.||+|.+.+ .||+|.+....  ....+.+.+|+.++++++||||+++++++ ..+..++||
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            345779999999999999999999755 49999987653  34457799999999999999999999965 455689999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++.      .....+++..++.++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++..
T Consensus        99 e~~~~~~L~~~l~------~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~  169 (289)
T 3og7_A           99 QWCEGSSLYHHLH------ASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE  169 (289)
T ss_dssp             ECCCEEEHHHHHT------TC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred             EecCCCcHHHHHh------hccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccc
Confidence            9999999999985      24567999999999999999999999   89999999999999999999999999999875


Q ss_pred             cCCC------cccccccccccccccc---------CCCcccHHHHHHHHhhccccc-------ccccccccCCCCCC---
Q 045682          213 IPEG------ELLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSCS---  267 (309)
Q Consensus       213 ~~~~------~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~---  267 (309)
                      ....      ....|...|.+|+...         ..+.|+++..++.++.+....       .+......+.....   
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  249 (289)
T 3og7_A          170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK  249 (289)
T ss_dssp             --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTS
T ss_pred             cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhh
Confidence            4321      1234555566555432         224455555555555443211       11111111221111   


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ....++.++.+|+..||+.||.+|||+.++++.|+++.+
T Consensus       250 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            122556889999999999999999999999999998764

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=277.90  Aligned_cols=226  Identities=17%  Similarity=0.252  Sum_probs=180.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  130 (309)
                      .++|+..+.||+|+||.||+|.+  +++.||+|.+...   .......+.+|..++..+ +||||+++++++.+.+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            47799999999999999999998  7899999998653   223446688999999998 79999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       102 v~E~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a  171 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQ-------KSRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC  171 (353)
T ss_dssp             EEECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEeCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccce
Confidence            999999999999987       4467999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCC----cccccccccccccccc------CCCcccHHHHHHHHhhccc------ccccccccccCCCCCCchHHHHH
Q 045682          211 ISIPEG----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       211 ~~~~~~----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      +.....    ....|...|.+|+...      ..+.|+++..+++++.+..      ..+++..+..+....+  ...+.
T Consensus       172 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~  249 (353)
T 3txo_A          172 KEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP--TWLHE  249 (353)
T ss_dssp             BCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--TTSCH
T ss_pred             eecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCH
Confidence            864322    2345666676666432      3355666666666655432      2333444444443332  24567


Q ss_pred             HHHHHHHHcccCCCCCCCCH
Q 045682          275 AYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~  294 (309)
                      .+.+|+..||+.||.+||++
T Consensus       250 ~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          250 DATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             HHHHHHHHHTCSSGGGSTTS
T ss_pred             HHHHHHHHHhhhCHHHccCC
Confidence            89999999999999999998

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=9.9e-38  Score=274.64  Aligned_cols=256  Identities=16%  Similarity=0.240  Sum_probs=193.8

Q ss_pred             ccccHHHHHHHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCccee
Q 045682           46 CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFK  117 (309)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~  117 (309)
                      ..+..+++....++|...+.||+|+||.||+|.+.       +..||+|.+.... ......+.+|+.+++.++||||++
T Consensus        13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   92 (322)
T 1p4o_A           13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR   92 (322)
T ss_dssp             SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             cccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEee
Confidence            34566677777889999999999999999999863       5789999987653 334467899999999999999999


Q ss_pred             eeeeeeeCCceEEEEEeccCCChhhhhhhhCC---CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          118 LIGCCLETQIPILVFEYINCGSLADRIRIQHN---PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       118 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                      +++++.+.+..++||||+++|+|.+++.....   .......+++..++.++.|++.||.|||   +.+|+||||||+||
T Consensus        93 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NI  169 (322)
T 1p4o_A           93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNC  169 (322)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGE
T ss_pred             eEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceE
Confidence            99999999999999999999999999863210   0112356799999999999999999999   89999999999999


Q ss_pred             eecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------ccc
Q 045682          195 LFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEI  255 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~  255 (309)
                      +++.++.+||+|||++.......      ...|...|.+|+...      ..+.|+++..++.++. +...      .++
T Consensus       170 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  249 (322)
T 1p4o_A          170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV  249 (322)
T ss_dssp             EECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred             EEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH
Confidence            99999999999999997654332      112223344444321      2345566666666654 2211      122


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                      ......+.... .+...+..+.+|+.+||+.||.+|||+.++++.|+++.
T Consensus       250 ~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          250 LRFVMEGGLLD-KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             HHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHHcCCcCC-CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            22223333222 22356688999999999999999999999999998753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=5.7e-37  Score=264.79  Aligned_cols=241  Identities=19%  Similarity=0.245  Sum_probs=182.7

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-C----CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-Q----ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ..++|...+.||+|+||.||+|.+ .    +..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+ +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            346788899999999999999997 2    2469999987653 3455779999999999999999999999865 4578


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++++|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+
T Consensus        89 ~v~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  159 (281)
T 3cc6_A           89 IIMELYPYGELGHYLER------NKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGL  159 (281)
T ss_dssp             EEEECCTTCBHHHHHHH------HTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred             EEEecCCCCCHHHHHHh------ccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCC
Confidence            99999999999999863      2356899999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCchHH
Q 045682          210 SISIPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      +.......     ...+...|.+|+...      ..+.|+++..++.++. +...      .+.......+.... .+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~  238 (281)
T 3cc6_A          160 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP-KPDL  238 (281)
T ss_dssp             GGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC-CCTT
T ss_pred             CcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC-CCCC
Confidence            98764432     222333444444322      2345566666666654 3321      11222222222222 2234


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .++.+.+++.+||+.||++|||+.++++.|+++...
T Consensus       239 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          239 CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence            567899999999999999999999999999998753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.1e-36  Score=262.00  Aligned_cols=233  Identities=17%  Similarity=0.198  Sum_probs=180.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|+..+.||+|+||.||+|.+  +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            35688899999999999999998  68999999986543 3445778999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++...
T Consensus        86 ~~~~~~L~~~l~-------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A           86 YCSGGELFDRIE-------PDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVF  155 (276)
T ss_dssp             CCTTEEGGGGSB-------TTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ecCCCcHHHHHh-------hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence            999999999986       4567999999999999999999999   899999999999999999999999999999765


Q ss_pred             CCC------ccccccccccccccccCCC-------cccHHHHHHHHhhccccccc-------ccccccCCCCCCchHHHH
Q 045682          214 PEG------ELLTGLRAFDLARLNEDDG-------YVALRDHVKKYFEEDRLNEI-------IDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       214 ~~~------~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~  273 (309)
                      ...      ....|...+.+|+......       .|+++..++.++.+......       .................+
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (276)
T 2yex_A          156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID  235 (276)
T ss_dssp             EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSC
T ss_pred             CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcC
Confidence            322      2334566666666544333       33444444444443322110       111111111112223556


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.+|+..||+.||++|||+.++++
T Consensus       236 ~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          236 SAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            78999999999999999999999874

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=3.1e-37  Score=274.80  Aligned_cols=232  Identities=15%  Similarity=0.134  Sum_probs=170.0

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ..+.|...+.||+|+||.||+|.+  +++.||+|.+....  ..+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            456788999999999999999999  67899999987653  34568899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEEeecccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKLFDFSFS  210 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~a  210 (309)
                      |+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|||++
T Consensus       129 ~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a  198 (349)
T 2w4o_A          129 LVTGGELFDRIV-------EKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLS  198 (349)
T ss_dssp             CCCSCBHHHHHT-------TCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred             eCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence            999999999986       4567999999999999999999999   899999999999999975   889999999999


Q ss_pred             cccCCCc---cccccccccccccccC------CCcccHHHHHHHHhhccccc-------ccccccccCCCCCC--chHHH
Q 045682          211 ISIPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSCS--GKEQQ  272 (309)
Q Consensus       211 ~~~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~--~~~~~  272 (309)
                      +......   ...|...|.+|+....      .+.|+++..++.++.+....       ..+..+..+.....  .....
T Consensus       199 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~  278 (349)
T 2w4o_A          199 KIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEV  278 (349)
T ss_dssp             --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTS
T ss_pred             cccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhC
Confidence            8764432   3446666666654332      34566666666665543221       12222222322211  11345


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+|+.+||+.||++|||+.++++
T Consensus       279 ~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          279 SLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            678999999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=1.1e-37  Score=269.38  Aligned_cols=235  Identities=17%  Similarity=0.236  Sum_probs=182.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee----------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE----------  124 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----------  124 (309)
                      .++|+..+.||+|+||.||+|.+  +++.||+|.+....    ..+.+|+.++..++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            35688899999999999999999  68999999987654    346789999999999999999998854          


Q ss_pred             ------CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC
Q 045682          125 ------TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE  198 (309)
Q Consensus       125 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~  198 (309)
                            ....++||||+++|+|.+++...     ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~  157 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKR-----RGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVD  157 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHG-----GGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEE
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcC
Confidence                  44579999999999999998632     2457999999999999999999999   899999999999999999


Q ss_pred             CCcEEEeecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhccccc----ccccccccCCCC
Q 045682          199 ENVAKLFDFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN----EIIDPLIMGDRS  265 (309)
Q Consensus       199 ~~~~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~  265 (309)
                      ++.+||+|||++.......   ...|...|.+|+...      ..+.|+++..++.++.+....    ........+..+
T Consensus       158 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T 2a19_B          158 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIIS  237 (284)
T ss_dssp             TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhccccc
Confidence            9999999999998765432   233555555555322      234566666666665433211    111111222222


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                          ...+..+.+++..||+.||.+|||+.++++.|..+.++
T Consensus       238 ----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          238 ----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             ----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence                13346789999999999999999999999999988765

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=7.1e-37  Score=269.96  Aligned_cols=247  Identities=17%  Similarity=0.202  Sum_probs=185.8

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      ..++|...+.||+|+||.||+|.+       ++..||+|.+.... ......+.+|+.++.+++||||+++++++.....
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            346799999999999999999984       45789999997543 3445679999999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEE
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKL  204 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl  204 (309)
                      .++||||+++|+|.+++............+++..++.++.|++.||.|||   +.+++||||||+|||++.   +..+||
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEE
Confidence            99999999999999999754433333466999999999999999999999   899999999999999984   456999


Q ss_pred             eecccccccCCC------cccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCC
Q 045682          205 FDFSFSISIPEG------ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRS  265 (309)
Q Consensus       205 ~Dfg~a~~~~~~------~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~  265 (309)
                      +|||++......      ....|...|.+|+...      ..+.|+++..++.++. +...      .++......+...
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~  264 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM  264 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC
Confidence            999998754222      1223344455554321      2345566666666654 3211      1222333333322


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      . .+..++..+.+|+..||+.||.+|||+.+|++.|+.+..
T Consensus       265 ~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          265 D-PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             C-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             C-CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            2 223566889999999999999999999999999998765

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=7.4e-37  Score=264.30  Aligned_cols=233  Identities=17%  Similarity=0.210  Sum_probs=182.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+...  .......+.+|+.++.+++||||+++++++..++..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46788999999999999999998  6899999998654  2344567889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc---EEEeeccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV---AKLFDFSF  209 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~  209 (309)
                      ||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.   +||+|||+
T Consensus        85 e~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~  154 (284)
T 3kk8_A           85 DLVTGGELFEDIV-------AREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGL  154 (284)
T ss_dssp             CCCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             ecCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeecee
Confidence            9999999999986       4467999999999999999999999   899999999999999976655   99999999


Q ss_pred             ccccCCCcc---ccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCC--chHHH
Q 045682          210 SISIPEGEL---LTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCS--GKEQQ  272 (309)
Q Consensus       210 a~~~~~~~~---~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~--~~~~~  272 (309)
                      +........   ..|...|.+|+....      .+.|+++..++.++.+...      .+.......+....+  .....
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T 3kk8_A          155 AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV  234 (284)
T ss_dssp             CEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred             eEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhccc
Confidence            977655432   345666666654332      3445555555555544322      122222222222211  11245


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++++.+|+..||+.||++|||+.++++
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          235 TPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            678999999999999999999999975

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=5.2e-37  Score=269.86  Aligned_cols=230  Identities=15%  Similarity=0.223  Sum_probs=184.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|..  +++.||+|.+....   ....+.+.+|..++..++||||+++++++.+.+..++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            5688899999999999999998  78999999986532   234467889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.+|.+||+|||+++.
T Consensus        86 e~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~  155 (318)
T 1fot_A           86 DYIEGGELFSLLR-------KSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKY  155 (318)
T ss_dssp             CCCCSCBHHHHHH-------HTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             eCCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCccee
Confidence            9999999999997       4567999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc-ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHH
Q 045682          213 IPEGE-LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       213 ~~~~~-~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..... ...|...|.+|+...      ..+.|+++..+++++.+...      .+....+..+....+  ...+.++.+|
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~l  233 (318)
T 1fot_A          156 VPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKDL  233 (318)
T ss_dssp             CSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHH
T ss_pred             cCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCHHHHHH
Confidence            65432 345666666665432      23566777777777654322      223333333333222  2456789999


Q ss_pred             HHHcccCCCCCCC-----CHHHHHH
Q 045682          280 IFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      +.+||+.||.+||     ++.+|++
T Consensus       234 i~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          234 LSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhccCHHHcCCCcCCCHHHHhc
Confidence            9999999999999     8888763

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=5e-37  Score=277.19  Aligned_cols=226  Identities=19%  Similarity=0.230  Sum_probs=177.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  130 (309)
                      .++|+..+.||+|+||.||+|++  +++.||+|++....   ......+..|..++.++ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            36788899999999999999998  78999999987542   23335578999999888 89999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       131 V~E~~~gg~L~~~l~-------~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla  200 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQ-------RQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC  200 (396)
T ss_dssp             EEECCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEcCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeeccee
Confidence            999999999999987       4467999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCC----CccccccccccccccccC------CCcccHHHHHHHHhhcccccc---------------cccccccCCCC
Q 045682          211 ISIPE----GELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNE---------------IIDPLIMGDRS  265 (309)
Q Consensus       211 ~~~~~----~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~g~~~  265 (309)
                      +....    .....|...|.+|+....      .+.|+++..+++++.+.....               +...+..+...
T Consensus       201 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~  280 (396)
T 4dc2_A          201 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR  280 (396)
T ss_dssp             BCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC
T ss_pred             eecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC
Confidence            86322    224456777777665433      245566666666655543321               11222222222


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~  294 (309)
                        .+...+.++.+|+..||+.||.+||++
T Consensus       281 --~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          281 --IPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             --CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             --CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence              123456789999999999999999996

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.1e-36  Score=268.26  Aligned_cols=233  Identities=16%  Similarity=0.180  Sum_probs=182.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .+.|...+.||+|+||.||+|.+  +++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            35688899999999999999998  689999999866432      1357799999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC----cEEE
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN----VAKL  204 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~----~~kl  204 (309)
                      ++||||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+++||||||+||+++.++    .+||
T Consensus        91 ~lv~e~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl  160 (321)
T 2a2a_A           91 VLILELVSGGELFDFLA-------QKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (321)
T ss_dssp             EEEECCCCSCBHHHHHH-------TCSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEEEEcCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEE
Confidence            99999999999999987       4567999999999999999999999   89999999999999999888    7999


Q ss_pred             eecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCc-
Q 045682          205 FDFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSG-  268 (309)
Q Consensus       205 ~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~-  268 (309)
                      +|||++.......   ...|...|.+|+...      ..+.|+++..++.++.+...      .+.+.....+....+. 
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (321)
T 2a2a_A          161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEE  240 (321)
T ss_dssp             CCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHH
T ss_pred             ccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChh
Confidence            9999998765432   234555566555432      23455566666665544322      1222222222222221 


Q ss_pred             -hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 -KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 -~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       ....+..+.+|+..||+.||++|||+.++++
T Consensus       241 ~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          241 FFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence             1234577999999999999999999999975

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=9.4e-37  Score=269.14  Aligned_cols=223  Identities=22%  Similarity=0.250  Sum_probs=167.3

Q ss_pred             cCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           63 EKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      .+.||+|+||.||+|.+  +++.||||.+...   ....+.+|+.++..+. ||||+++++++.++...++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            57899999999999999  6899999998653   3456789999999996 9999999999999999999999999999


Q ss_pred             hhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC---cEEEeecccccccCCC
Q 045682          140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN---VAKLFDFSFSISIPEG  216 (309)
Q Consensus       140 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~  216 (309)
                      |.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++   .+||+|||+++.....
T Consensus        93 L~~~l~-------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A           93 LFERIK-------KKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD  162 (325)
T ss_dssp             HHHHHH-------HCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred             HHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence            999987       4567999999999999999999999   89999999999999997765   8999999999865443


Q ss_pred             c----cccccccccccccccC------CCcccHHHHHHHHhhcccc-------------cccccccccCCCCCCch--HH
Q 045682          217 E----LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL-------------NEIIDPLIMGDRSCSGK--EQ  271 (309)
Q Consensus       217 ~----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~g~~~~~~~--~~  271 (309)
                      .    ...|...|.+|+....      .+.|+++..++.++.+...             .+++..+..+..+....  ..
T Consensus       163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  242 (325)
T 3kn6_A          163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN  242 (325)
T ss_dssp             ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHT
T ss_pred             CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccC
Confidence            2    2334555555554332      2445555555555544322             23344444555444332  23


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      .+.++.+|+..||+.||.+|||+.+++
T Consensus       243 ~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          243 VSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             SCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             CCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence            568899999999999999999999876

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=4.2e-37  Score=273.93  Aligned_cols=230  Identities=17%  Similarity=0.186  Sum_probs=185.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            5688899999999999999998  78999999986532   234567889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       121 e~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          121 EYVAGGEMFSHLR-------RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             ECCTTCBHHHHHH-------HHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             cCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEccccccee
Confidence            9999999999997       3456999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc-cccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHHHHHH
Q 045682          213 IPEGE-LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       213 ~~~~~-~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      ..... ...|...|.+|+....      .+.|+++..++.++.+...      .++...+..+....+  ...+.++.+|
T Consensus       191 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~l  268 (350)
T 1rdq_E          191 VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP--SHFSSDLKDL  268 (350)
T ss_dssp             CSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--TTCCHHHHHH
T ss_pred             ccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHH
Confidence            65432 4456666766664332      3455666666666554322      233334444443322  3456889999


Q ss_pred             HHHcccCCCCCCCC-----HHHHHH
Q 045682          280 IFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      +.+||+.||.+||+     +.+|++
T Consensus       269 i~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          269 LRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhhcCHHhccCCccCCHHHHHh
Confidence            99999999999998     777753

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2e-36  Score=274.10  Aligned_cols=242  Identities=16%  Similarity=0.204  Sum_probs=187.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC--ceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ--IPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv~  132 (309)
                      +.|...+.||+|+||.||+|.+  +++.||||.+.... ....+.+.+|+.++.+++||||+++++++...+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            5688899999999999999999  68999999987643 234567889999999999999999999998755  679999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee----cCCCcEEEeecc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF----NEENVAKLFDFS  208 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg  208 (309)
                      ||+++|+|.+++....    ....+++..++.++.|++.||+|||   +.+|+||||||+|||+    +.++.+||+|||
T Consensus        89 e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPS----NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             CCCTTEEHHHHTTSGG----GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             ecCCCCCHHHHHHhhh----cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence            9999999999986221    2233999999999999999999999   8999999999999999    778889999999


Q ss_pred             cccccCCCc---ccccccccccccccc--------------CCCcccHHHHHHHHhhccccc----------cccccccc
Q 045682          209 FSISIPEGE---LLTGLRAFDLARLNE--------------DDGYVALRDHVKKYFEEDRLN----------EIIDPLIM  261 (309)
Q Consensus       209 ~a~~~~~~~---~~~g~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~  261 (309)
                      +++......   ...|...|.+|+...              ..+.|+++..++.++.+....          +++.....
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~  241 (396)
T 4eut_A          162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (396)
T ss_dssp             GCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred             CceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence            998765543   233555565555321              235566666666665543221          11111111


Q ss_pred             CCC-----------------------CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          262 GDR-----------------------SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       262 g~~-----------------------~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      +..                       +.......+..+.+++.+||+.||++|||+.++++.+.++..
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            111                       112235778889999999999999999999999999988864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.4e-36  Score=267.04  Aligned_cols=248  Identities=17%  Similarity=0.244  Sum_probs=179.6

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeee-----
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCL-----  123 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~-----  123 (309)
                      .+.....+|...+.||+|+||.||+|.+  +++.||+|++..........+.+|+.++.++. ||||+++++++.     
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred             eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence            3334456788999999999999999998  88999999987766666678999999999995 999999999984     


Q ss_pred             ---eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeCCCCCCCeeecC
Q 045682          124 ---ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP--VIFRDFKLSNILFNE  198 (309)
Q Consensus       124 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--iiH~dlkp~Nill~~  198 (309)
                         .....++||||+. |+|.+++....    ....+++..++.++.||+.||.|||   +.+  |+||||||+|||++.
T Consensus       102 ~~~~~~~~~lv~e~~~-g~L~~~l~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~  173 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCK-GQLVEFLKKME----SRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSN  173 (337)
T ss_dssp             STTSSEEEEEEEECCS-EEHHHHHHHHH----TTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECT
T ss_pred             cccCCceEEEEEEecC-CCHHHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECC
Confidence               3345799999997 69999986321    3457999999999999999999999   888  999999999999999


Q ss_pred             CCcEEEeecccccccCCCc----------------ccccccccccccccc---------CCCcccHHHHHHHHhhccccc
Q 045682          199 ENVAKLFDFSFSISIPEGE----------------LLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLN  253 (309)
Q Consensus       199 ~~~~kl~Dfg~a~~~~~~~----------------~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      ++.+||+|||++.......                ...|...|.+|+...         ..+.|+++..++.++.+....
T Consensus       174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~  253 (337)
T 3ll6_A          174 QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF  253 (337)
T ss_dssp             TSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             CCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCC
Confidence            9999999999998764432                223555566665431         224455555556555443221


Q ss_pred             cc--ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          254 EI--IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       254 ~~--~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .-  ......+..........+..+.+|+..||+.||.+|||+.++++.|+.+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          254 EDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             ------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cchhHHHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            10  0111112222222234446689999999999999999999999999998765

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.3e-36  Score=278.29  Aligned_cols=148  Identities=18%  Similarity=0.269  Sum_probs=132.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----Cc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----QI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~  127 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||++...  .....+.+.+|+.+|..++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46799999999999999999998  7899999999764  234457799999999999999999999999776     56


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||++ |+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       105 ~~lv~e~~~-~~L~~~~~-------~~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DF  173 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFK-------TPIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDF  173 (432)
T ss_dssp             EEEEEECCS-EEHHHHHH-------SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             EEEEEecCC-cCHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccC
Confidence            899999987 49999987       5567999999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCC
Q 045682          208 SFSISIPE  215 (309)
Q Consensus       208 g~a~~~~~  215 (309)
                      |+++....
T Consensus       174 Gla~~~~~  181 (432)
T 3n9x_A          174 GLARTINS  181 (432)
T ss_dssp             TTCEEC--
T ss_pred             CCcccccc
Confidence            99987643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.8e-37  Score=276.11  Aligned_cols=233  Identities=13%  Similarity=0.178  Sum_probs=178.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+.... ....+.+.+|+.++..++||||+++++++..++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            35688899999999999999999  68999999987653 3445779999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |+++++|.+++.       ....+++..+..++.|++.||.|||   +. +|+|+||||+|||++.++.+||+|||++..
T Consensus       112 ~~~~~~L~~~l~-------~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  181 (360)
T 3eqc_A          112 HMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  181 (360)
T ss_dssp             CCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred             CCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcc
Confidence            999999999987       3457999999999999999999999   75 899999999999999999999999999865


Q ss_pred             cCC--CccccccccccccccccC------CCcccHHHHHHHHhhccccc-------------------------------
Q 045682          213 IPE--GELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLN-------------------------------  253 (309)
Q Consensus       213 ~~~--~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------------------------------  253 (309)
                      ...  .....|...|.+|+....      .+.|+++..++.++.+....                               
T Consensus       182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (360)
T 3eqc_A          182 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  261 (360)
T ss_dssp             HHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred             cccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence            422  123345555555554332      23455555555554443211                               


Q ss_pred             -----------------ccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          254 -----------------EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       254 -----------------~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                       +.++....+..+.......+.++.+|+.+||+.||++|||+.++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                             0111111122222222234678999999999999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=7.7e-37  Score=263.10  Aligned_cols=231  Identities=19%  Similarity=0.211  Sum_probs=175.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.+++.++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            36788899999999999999998  68999999986532   23346789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.
T Consensus        90 ~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~  159 (276)
T 2h6d_A           90 MEYVSGGELFDYIC-------KHGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSN  159 (276)
T ss_dssp             EECCCSCBHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGG
T ss_pred             EeccCCCcHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccc
Confidence            99999999999986       3456899999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCc---cccccccccccccccCC-------CcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHHH
Q 045682          212 SIPEGE---LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      ......   ...|...+.+|+.....       +.|+++..++.++.+...      .++......+....  +...+.+
T Consensus       160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~  237 (276)
T 2h6d_A          160 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI--PEYLNRS  237 (276)
T ss_dssp             CCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTSCHH
T ss_pred             ccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccC--chhcCHH
Confidence            765433   23455556666554332       334444444444443221      11222222222211  1234578


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+++.+||+.||.+|||+.++++
T Consensus       238 l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          238 VATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhhCCCHHHHHh
Confidence            999999999999999999999986

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5e-37  Score=272.67  Aligned_cols=244  Identities=15%  Similarity=0.142  Sum_probs=181.3

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-----CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-----KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET  125 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  125 (309)
                      +....++|...+.||+|+||.||+|.+  ++..||+|.+...     .....+.+.+|+.+++.++||||+++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            445567799999999999999999998  7789999998543     234557899999999999999999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCC---------------------------------CCCCCCCHHHHHHHHHHHHHH
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQ---------------------------------PQHEPLLLTHRLKIAKDIANA  172 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~---------------------------------~~~~~l~~~~~~~i~~~ia~~  172 (309)
                      +..++||||+++|+|.+++.......                                 .....+++..++.++.|++.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            99999999999999999984211000                                 012234677888999999999


Q ss_pred             HHHhhcCCCCCeEeCCCCCCCeeecCCC--cEEEeecccccccCCC--------cccccccccccccccc--------CC
Q 045682          173 IAYLHVGFPRPVIFRDFKLSNILFNEEN--VAKLFDFSFSISIPEG--------ELLTGLRAFDLARLNE--------DD  234 (309)
Q Consensus       173 l~yLH~~~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~--------~~~~g~~~~~~~~~~~--------~~  234 (309)
                      |.|||   +.+|+||||||+|||++.++  .+||+|||++......        ....|...|.+|+...        ..
T Consensus       181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  257 (345)
T 3hko_A          181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC  257 (345)
T ss_dssp             HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred             HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence            99999   89999999999999998776  8999999999764321        1334555566665432        22


Q ss_pred             CcccHHHHHHHHhhcccc------cccccccccCCCCCCc--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          235 GYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSG--KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~--~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.|+++..++.++.+...      .+.+.....+......  ....+.++.+|+.+||+.||.+|||+.++++
T Consensus       258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            455566566655544322      2222233333332222  2235688999999999999999999999985

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.3e-36  Score=280.45  Aligned_cols=147  Identities=16%  Similarity=0.285  Sum_probs=122.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----Cc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----QI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~  127 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||++...  .....+.+.+|+.+|..++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            36799999999999999999998  7899999998664  234557799999999999999999999999543     56


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+. |+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       132 ~~lv~e~~~-~~L~~~~~-------~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DF  200 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFR-------TPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDF  200 (458)
T ss_dssp             EEEEECCCS-EEHHHHHH-------SSCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCC
T ss_pred             EEEEEeccc-cchhhhcc-------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeeccc
Confidence            899999985 69999986       5567999999999999999999999   899999999999999999999999999


Q ss_pred             ccccccC
Q 045682          208 SFSISIP  214 (309)
Q Consensus       208 g~a~~~~  214 (309)
                      |+++...
T Consensus       201 Gla~~~~  207 (458)
T 3rp9_A          201 GLARTVD  207 (458)
T ss_dssp             TTCBCTT
T ss_pred             ccchhcc
Confidence            9998764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=8e-38  Score=283.73  Aligned_cols=238  Identities=13%  Similarity=0.157  Sum_probs=186.0

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeC
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLET  125 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  125 (309)
                      .++....++|...+.||+|+||.||+|.+  +++.||+|++....   ......+.+|+.++..++||||+++++++.++
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            34444567899999999999999999999  68999999986521   12234578999999999999999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      +..++||||+++|+|.+++.        ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~--------~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~  210 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMS--------NYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLA  210 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHH--------HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             CEEEEEEeCCCCCcHHHHHH--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEe
Confidence            99999999999999999986        245899999999999999999999   8999999999999999999999999


Q ss_pred             ecccccccCCCc-----ccccccccccccccc----------CCCcccHHHHHHHHhhcccc------cccccccccCC-
Q 045682          206 DFSFSISIPEGE-----LLTGLRAFDLARLNE----------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGD-  263 (309)
Q Consensus       206 Dfg~a~~~~~~~-----~~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~-  263 (309)
                      |||+++......     ...|...|.+|+...          ..+.|+++..+++++.+...      .+....+..+. 
T Consensus       211 DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~  290 (410)
T 3v8s_A          211 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN  290 (410)
T ss_dssp             CCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH
T ss_pred             ccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccc
Confidence            999998765443     445777777776432          23456666666666554322      22222222221 


Q ss_pred             -CCCCchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 045682          264 -RSCSGKEQQLQAYAHLIFECVNESPVD--RPTMVDVAK  299 (309)
Q Consensus       264 -~~~~~~~~~~~~l~~li~~Cl~~~P~~--RPt~~~l~~  299 (309)
                       ...+.....+.++.+|+.+||+.+|.+  ||++.+|++
T Consensus       291 ~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          291 SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence             111222245688999999999999988  999999874

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.1e-36  Score=264.19  Aligned_cols=230  Identities=16%  Similarity=0.219  Sum_probs=177.3

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeee----CCceEEE
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE----TQIPILV  131 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv  131 (309)
                      |...+.||+|+||.||+|.+  ++..||+|.+...  .....+.+.+|+.+++.++||||+++++++..    ....++|
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            56677899999999999998  7789999998654  33455779999999999999999999999875    3458999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeCCCCCCCeeec-CCCcEEEeecc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP--VIFRDFKLSNILFN-EENVAKLFDFS  208 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--iiH~dlkp~Nill~-~~~~~kl~Dfg  208 (309)
                      |||+++|+|.+++.       ....+++..++.++.|++.||.|||   +.+  ++|+||||+|||++ .++.+||+|||
T Consensus       108 ~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg  177 (290)
T 1t4h_A          108 TELMTSGTLKTYLK-------RFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLG  177 (290)
T ss_dssp             EECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred             EEecCCCCHHHHHH-------HccCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence            99999999999997       3467999999999999999999999   788  99999999999997 78999999999


Q ss_pred             cccccCCCc--ccccccccccccccc-----CCCcccHHHHHHHHhhcccc-------cccccccccCCCCCCchHHHHH
Q 045682          209 FSISIPEGE--LLTGLRAFDLARLNE-----DDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       209 ~a~~~~~~~--~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      ++.......  ...|...+.+|+...     ..+.|+++..++.++.+...       ..+......+..+...+...++
T Consensus       178 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (290)
T 1t4h_A          178 LATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP  257 (290)
T ss_dssp             GGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH
T ss_pred             CcccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCH
Confidence            997654432  334555666665432     22445555555555544321       1222222333333333334457


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+|+..||+.||.+|||+.++++
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          258 EVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhh
Confidence            8999999999999999999999975

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.3e-36  Score=265.53  Aligned_cols=233  Identities=15%  Similarity=0.163  Sum_probs=180.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|...+.||+|+||.||+|..  +++.||+|.+..........+.+|+.++..++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            35688899999999999999998  7899999999876544556789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee---cCCCcEEEeeccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSI  211 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~  211 (309)
                      +++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+||++   +.++.+||+|||++.
T Consensus        88 ~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~  157 (304)
T 2jam_A           88 VSGGELFDRIL-------ERGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK  157 (304)
T ss_dssp             CCSCBHHHHHH-------HHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred             CCCccHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence            99999999986       3457899999999999999999999   8999999999999999   788999999999997


Q ss_pred             ccCCCc--cccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCC--chHHHHHH
Q 045682          212 SIPEGE--LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCS--GKEQQLQA  275 (309)
Q Consensus       212 ~~~~~~--~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~--~~~~~~~~  275 (309)
                      ......  ...|...|.+|+....      .+.|+++..++.++.+...      .++...+..+.....  .....+.+
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  237 (304)
T 2jam_A          158 MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISES  237 (304)
T ss_dssp             CCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHH
T ss_pred             ecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHH
Confidence            654432  3346666666665432      2344455555555443321      122222333322221  12345688


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+++..||+.||++|||+.++++
T Consensus       238 ~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          238 AKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=4.4e-36  Score=260.69  Aligned_cols=235  Identities=18%  Similarity=0.189  Sum_probs=178.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +.|.....||+|+||.||+|.+  ++..||+|.+........+.+.+|+.++..++||||+++++++...+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            3455566899999999999998  78899999998776666678999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-CCcEEEeecccccccC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLFDFSFSISIP  214 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~  214 (309)
                      ++++|.+++....    ....+++..+..++.|++.||.|||   +.+++|+||||+||+++. ++.+||+|||++....
T Consensus       102 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A          102 PGGSLSALLRSKW----GPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             SEEEHHHHHHHTT----CCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred             CCCCHHHHHHhhc----cCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence            9999999986321    2345778999999999999999999   899999999999999987 8999999999998764


Q ss_pred             CC----cccccccccccccccc--------CCCcccHHHHHHHHhhccccccccc-------ccccCCCCCCchHHHHHH
Q 045682          215 EG----ELLTGLRAFDLARLNE--------DDGYVALRDHVKKYFEEDRLNEIID-------PLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       215 ~~----~~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~  275 (309)
                      ..    ....|...+.+|+...        ..+.|+++..++.++.+.....-..       ...........+...+.+
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (295)
T 2clq_A          175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAE  254 (295)
T ss_dssp             C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHH
T ss_pred             CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHH
Confidence            32    2334555565555322        2345566666666655432211100       000001111222355688


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||+.||++|||+.++++
T Consensus       255 ~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          255 AKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHccCChhhCCCHHHHhc
Confidence            999999999999999999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=3.3e-37  Score=272.47  Aligned_cols=234  Identities=13%  Similarity=0.161  Sum_probs=169.0

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ...++|...+.||+|+||.||+|.+  +++.||+|++....  ......+.+|+.++++++||||+++++++.+++..++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            3457799999999999999999998  78999999987653  2234567899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee-----cCCCcEEEe
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF-----NEENVAKLF  205 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill-----~~~~~~kl~  205 (309)
                      ||||+++ +|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||+     +.++.+||+
T Consensus       111 v~e~~~~-~L~~~~~-------~~~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~  179 (329)
T 3gbz_A          111 IFEYAEN-DLKKYMD-------KNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIG  179 (329)
T ss_dssp             EEECCSE-EHHHHHH-------HCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred             EEecCCC-CHHHHHh-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEEC
Confidence            9999985 9999986       4557999999999999999999999   8999999999999999     455569999


Q ss_pred             ecccccccCCC----ccccccccccccccccCC-------CcccHHHHHHHHhhcccccc------ccccccc--C----
Q 045682          206 DFSFSISIPEG----ELLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNE------IIDPLIM--G----  262 (309)
Q Consensus       206 Dfg~a~~~~~~----~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~~~~~--g----  262 (309)
                      |||++......    ....|...|.+|+.....       +.|+++..++.++.+.....      .+.....  +    
T Consensus       180 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  259 (329)
T 3gbz_A          180 DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDD  259 (329)
T ss_dssp             CTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCT
T ss_pred             cCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCch
Confidence            99999765422    123345555555543322       34455555555544332110      0000000  0    


Q ss_pred             --------------CCC---CC-----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 --------------DRS---CS-----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 --------------~~~---~~-----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    ..+   ..     .+...+.++.+|+.+||+.||.+|||+.|+++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence                          000   00     00113577899999999999999999999975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.9e-37  Score=274.34  Aligned_cols=232  Identities=16%  Similarity=0.231  Sum_probs=182.6

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCce
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  128 (309)
                      ...++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+..|..++..+ +||||+++++++.+.+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            3457899999999999999999999  78999999986532   23446688899999987 999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus        94 ~lv~E~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG  163 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQ-------SCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFG  163 (345)
T ss_dssp             EEEEECCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEeCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeECh
Confidence            99999999999999987       3457999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCC----CccccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHH
Q 045682          209 FSISIPE----GELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       209 ~a~~~~~----~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~  272 (309)
                      +++....    .....|...|.+|+....      .+.|+++..+++++.+...      .++...+..+....  +...
T Consensus       164 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~--p~~~  241 (345)
T 1xjd_A          164 MCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY--PRWL  241 (345)
T ss_dssp             TCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTS
T ss_pred             hhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCC--Cccc
Confidence            9986432    224456666776665432      2455666666666544322      22333333333222  2245


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHH-HHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMV-DVA  298 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~-~l~  298 (309)
                      +.++.+|+.+||+.||++||++. +|.
T Consensus       242 s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          242 EKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            67899999999999999999997 554

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=2.7e-36  Score=262.08  Aligned_cols=241  Identities=17%  Similarity=0.181  Sum_probs=177.5

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeee-eeCCceEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCC-LETQIPILVF  132 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~-~~~~~~~lv~  132 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||+|.+.....  ...+.+|+.++..++|++++..++.+ ..+...++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            457799999999999999999997  889999998655432  23578899999999888877777666 5677789999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee---cCCCcEEEeeccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSF  209 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~  209 (309)
                      ||+ +++|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||+
T Consensus        85 e~~-~~~L~~~~~~------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~  154 (296)
T 4hgt_A           85 ELL-GPSLEDLFNF------CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL  154 (296)
T ss_dssp             ECC-CCBHHHHHHH------TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred             Ecc-CCCHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence            999 8899999862      2456999999999999999999999   8999999999999999   7889999999999


Q ss_pred             ccccCCCc-----------cccccccccccccccC------CCcccHHHHHHHHhhcccccccccc---------cccCC
Q 045682          210 SISIPEGE-----------LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIIDP---------LIMGD  263 (309)
Q Consensus       210 a~~~~~~~-----------~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~  263 (309)
                      +.......           ...|...+.+|+....      .+.|+++..++.++.+.....-.+.         .....
T Consensus       155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  234 (296)
T 4hgt_A          155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK  234 (296)
T ss_dssp             CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred             ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc
Confidence            98664332           3456666666654332      2444555555555444322111100         00000


Q ss_pred             CCCCch---HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          264 RSCSGK---EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       264 ~~~~~~---~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      .+.+..   ...+.++.+|+..||+.||++|||+.+|++.|+++..+.
T Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence            000000   123578999999999999999999999999999998764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.2e-36  Score=270.54  Aligned_cols=225  Identities=19%  Similarity=0.238  Sum_probs=178.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...+.||+|+||.||+|++  +++.||+|.+...   .......+.+|..++.++ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            5688899999999999999998  6899999999764   233456688999999998 899999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus        89 ~e~~~gg~L~~~l~-------~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~  158 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQ-------RQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK  158 (345)
T ss_dssp             ECCCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCB
T ss_pred             EeCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccc
Confidence            99999999999986       3457999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCC----CccccccccccccccccC------CCcccHHHHHHHHhhcccccc---------------cccccccCCCCC
Q 045682          212 SIPE----GELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNE---------------IIDPLIMGDRSC  266 (309)
Q Consensus       212 ~~~~----~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~g~~~~  266 (309)
                      ....    .....|...|.+|+....      .+.|+++..+++++.+.....               +...+..+... 
T Consensus       159 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-  237 (345)
T 3a8x_A          159 EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-  237 (345)
T ss_dssp             CSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-
T ss_pred             cccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-
Confidence            6422    123456666766665432      245566666666655443221               11112222222 


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~  294 (309)
                       .+...+.++.+|+.+||+.||.+||++
T Consensus       238 -~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          238 -IPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             -CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence             123456789999999999999999996

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=2e-36  Score=271.24  Aligned_cols=235  Identities=18%  Similarity=0.245  Sum_probs=186.7

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--------hhHHHHHHHHHHHhhc-cCCcceeeeeeee
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--------RMYDCCINNIVYASQM-IHRCFFKLIGCCL  123 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  123 (309)
                      ...++|...+.||+|+||.||+|.+  +|+.||||.+.....        ...+.+.+|+.++.++ +||||+++++++.
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            3456788889999999999999998  689999999866431        1235678999999999 8999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEE
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~k  203 (309)
                      ..+..++||||+++++|.+++.       ....+++..+..++.||+.||.|||   +.+++|+||||+|||++.++.+|
T Consensus       171 ~~~~~~lv~e~~~g~~L~~~l~-------~~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ik  240 (365)
T 2y7j_A          171 SSSFMFLVFDLMRKGELFDYLT-------EKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIR  240 (365)
T ss_dssp             BSSEEEEEECCCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEE
T ss_pred             eCCEEEEEEEeCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEE
Confidence            9999999999999999999986       3467999999999999999999999   89999999999999999999999


Q ss_pred             EeecccccccCCCc---cccccccccccccc------------cCCCcccHHHHHHHHhhccccc------ccccccccC
Q 045682          204 LFDFSFSISIPEGE---LLTGLRAFDLARLN------------EDDGYVALRDHVKKYFEEDRLN------EIIDPLIMG  262 (309)
Q Consensus       204 l~Dfg~a~~~~~~~---~~~g~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g  262 (309)
                      |+|||++.......   ...|...|.+|+..            ...+.|+++..++.++.+....      ..+..+..+
T Consensus       241 l~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~  320 (365)
T 2y7j_A          241 LSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG  320 (365)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             EEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence            99999998765443   34456666666532            2345677777777776554321      122223334


Q ss_pred             CCCCCch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DRSCSGK--EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~~~~--~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ......+  ...+..+.+|+.+||+.||++|||+.++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            3333222  134567999999999999999999999975

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=5.7e-37  Score=264.51  Aligned_cols=231  Identities=17%  Similarity=0.243  Sum_probs=179.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            35688899999999999999998  67889999985532   22346688999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++.       ....+++..++.++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++.
T Consensus        88 ~e~~~~~~l~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~  157 (279)
T 3fdn_A           88 LEYAPLGTVYRELQ-------KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV  157 (279)
T ss_dssp             ECCCTTEEHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEES
T ss_pred             EecCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccc
Confidence            99999999999986       3457999999999999999999999   9999999999999999999999999999986


Q ss_pred             ccCCCc--ccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHH
Q 045682          212 SIPEGE--LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       212 ~~~~~~--~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ......  ...|...+.+|+...      ..+.|+++..++.++.+....      +...........  .+...+..+.
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  235 (279)
T 3fdn_A          158 HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR  235 (279)
T ss_dssp             CC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCTTSCHHHH
T ss_pred             cCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCC--CCCcCCHHHH
Confidence            654332  334555555554322      235566666666665543321      122222222221  1224557899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +|+.+||+.||.+|||+.++++
T Consensus       236 ~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          236 DLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhccChhhCCCHHHHhh
Confidence            9999999999999999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=261.47  Aligned_cols=231  Identities=16%  Similarity=0.264  Sum_probs=174.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|..  +++.||+|.+....   ......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            5688899999999999999998  78999999986532   223467899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++.      .....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..
T Consensus        91 e~~~~~~L~~~l~------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~  161 (278)
T 3cok_A           91 EMCHNGEMNRYLK------NRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQ  161 (278)
T ss_dssp             ECCTTEEHHHHHH------TCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ecCCCCcHHHHHh------hccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceee
Confidence            9999999999986      13467999999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCc----ccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      .....    ...|...+.+|+...      ..+.|+++..++.++.+....      +.+.........  .+...+.++
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  239 (278)
T 3cok_A          162 LKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE--MPSFLSIEA  239 (278)
T ss_dssp             CC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC--CCTTSCHHH
T ss_pred             ccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC--CccccCHHH
Confidence            54321    234555555555322      346677777777776554321      222222222221  223456789


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||++|||+.++++
T Consensus       240 ~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          240 KDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHcccCHhhCCCHHHHhc
Confidence            99999999999999999999975

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-36  Score=266.70  Aligned_cols=242  Identities=16%  Similarity=0.169  Sum_probs=184.4

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||+|.+....   ....+.+.+|+.++..++||||+++++++..++..++
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            347899999999999999999998  78999999987642   2334678999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++
T Consensus       112 v~e~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~  181 (309)
T 2h34_A          112 DMRLINGVDLAAMLR-------RQGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIA  181 (309)
T ss_dssp             EEECCCCEEHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-
T ss_pred             EEEecCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccC
Confidence            999999999999987       3457999999999999999999999   899999999999999999999999999998


Q ss_pred             cccCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhhcccccc-----cccccccCCCCC--CchHHH
Q 045682          211 ISIPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE-----IIDPLIMGDRSC--SGKEQQ  272 (309)
Q Consensus       211 ~~~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~--~~~~~~  272 (309)
                      .......     ...|...|.+|+...      ..+.|+++..++.++.+.....     .+........+.  ..+...
T Consensus       182 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (309)
T 2h34_A          182 SATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGI  261 (309)
T ss_dssp             ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTC
T ss_pred             ccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCC
Confidence            7664432     233555555555332      3466777777777766543211     111111111111  111245


Q ss_pred             HHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHHHh
Q 045682          273 LQAYAHLIFECVNESPVDRP-TMVDVAKKLKQMYRS  307 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RP-t~~~l~~~L~~l~~~  307 (309)
                      +.++.+|+.+||+.||++|| |+.++++.|+++...
T Consensus       262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          262 PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence            57899999999999999999 999999999876543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=3.7e-37  Score=269.99  Aligned_cols=239  Identities=15%  Similarity=0.228  Sum_probs=175.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc----
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI----  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~----  127 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.++.+++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46788999999999999999998  78999999997653   2334678999999999999999999999876554    


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        91 ~~lv~e~~~g~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df  160 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVH-------TEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDF  160 (311)
T ss_dssp             EEEEEECCCEEEHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCC
T ss_pred             cEEEEecCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeec
Confidence            399999999999999986       3457999999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCc-------cccccccccccccccC------CCcccHHHHHHHHhhccccc------ccccccccCCCCCCc
Q 045682          208 SFSISIPEGE-------LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSG  268 (309)
Q Consensus       208 g~a~~~~~~~-------~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~  268 (309)
                      |++.......       ...|...|.+|+....      .+.|+++..++.++.+....      +.......+...+..
T Consensus       161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~  240 (311)
T 3ork_A          161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS  240 (311)
T ss_dssp             SCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHH
T ss_pred             cCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcc
Confidence            9997654321       2335666666654332      24455555555555443221      111111222211110


Q ss_pred             --hHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHHHHH
Q 045682          269 --KEQQLQAYAHLIFECVNESPVDRPTMVDVA-KKLKQMY  305 (309)
Q Consensus       269 --~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~-~~L~~l~  305 (309)
                        ....+.++.+|+.+||+.||.+||+..+++ +.+..+.
T Consensus       241 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence              012467899999999999999999776655 4455443

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=4.3e-37  Score=271.85  Aligned_cols=232  Identities=22%  Similarity=0.274  Sum_probs=173.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|++....  ....+.+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            5688889999999999999999  68999999986543  2334568899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+|||++.++.+||+|||++...
T Consensus       105 ~~~~~~l~~~~~-------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  174 (331)
T 4aaa_A          105 FVDHTILDDLEL-------FPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL  174 (331)
T ss_dssp             CCSEEHHHHHHH-------STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             cCCcchHHHHHh-------hccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceee
Confidence            999999999875       4567999999999999999999999   899999999999999999999999999999765


Q ss_pred             CCCc----cccccccccccccccC-------CCcccHHHHHHHHhhccccccccc-------------------------
Q 045682          214 PEGE----LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEIID-------------------------  257 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  257 (309)
                      ....    ...|...|.+|+....       .+.|+++..++.++.+.....-.+                         
T Consensus       175 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T 4aaa_A          175 AAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK  254 (331)
T ss_dssp             ---------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             cCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhh
Confidence            4321    2334555555553322       245556666666554432211000                         


Q ss_pred             -ccccCCC-----CCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 -PLIMGDR-----SCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 -~~~~g~~-----~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       +...+..     ....    ....+..+.+|+.+||+.||.+|||+.|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence             0000000     0000    0133578999999999999999999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=5e-36  Score=260.51  Aligned_cols=240  Identities=17%  Similarity=0.176  Sum_probs=180.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeee-eeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCC-LETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+.....  ...+.+|+.++..++|++++..++++ ..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            46789999999999999999997  889999999866532  24688999999999888877666665 55677899999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee---cCCCcEEEeecccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFS  210 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a  210 (309)
                      |+ +++|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||++
T Consensus        86 ~~-~~~L~~~~~~------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  155 (296)
T 3uzp_A           86 LL-GPSLEDLFNF------CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             CC-CCBHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             ec-CCCHHHHHHh------hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence            99 8899999852      2457999999999999999999999   8999999999999999   48899999999999


Q ss_pred             cccCCC-----------ccccccccccccccccC------CCcccHHHHHHHHhhccccccccc---------ccccCCC
Q 045682          211 ISIPEG-----------ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIID---------PLIMGDR  264 (309)
Q Consensus       211 ~~~~~~-----------~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~g~~  264 (309)
                      ......           ....|...|.+|+....      .+.|+++..++.++.+.....-..         ....+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  235 (296)
T 3uzp_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM  235 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence            865433           23446666666654332      244555555555544432211110         0000000


Q ss_pred             CCCc---hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          265 SCSG---KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       265 ~~~~---~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ..+.   ....+.++.+|+.+||+.||.+|||+.+|++.|+++....
T Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence            0000   0133578999999999999999999999999999998764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.7e-37  Score=283.61  Aligned_cols=241  Identities=14%  Similarity=0.126  Sum_probs=187.0

Q ss_pred             cHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeee
Q 045682           49 SAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCL  123 (309)
Q Consensus        49 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~  123 (309)
                      .+.++....++|+..+.||+|+||.||+|.+  +++.||+|++....   ......+.+|..++..++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            3455555678899999999999999999999  67999999986531   122234889999999999999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEE
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~k  203 (309)
                      +++..++||||+++|+|.+++..      ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+|
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~------~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vk  215 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSK------FEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIR  215 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHT------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEE
T ss_pred             eCCEEEEEEecCCCCcHHHHHHH------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEE
Confidence            99999999999999999999961      2467999999999999999999999   99999999999999999999999


Q ss_pred             EeecccccccCCCc-----ccccccccccccccc-----------CCCcccHHHHHHHHhhcccc------ccccccccc
Q 045682          204 LFDFSFSISIPEGE-----LLTGLRAFDLARLNE-----------DDGYVALRDHVKKYFEEDRL------NEIIDPLIM  261 (309)
Q Consensus       204 l~Dfg~a~~~~~~~-----~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  261 (309)
                      |+|||+++......     ...|...|.+|+...           ..+.|+++..+++++.+...      .+....+..
T Consensus       216 L~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  295 (437)
T 4aw2_A          216 LADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN  295 (437)
T ss_dssp             ECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             EcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhh
Confidence            99999997764432     245777777776532           23556666666666554322      122222221


Q ss_pred             C----CCCCCchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 045682          262 G----DRSCSGKEQQLQAYAHLIFECVNESPVD--RPTMVDVAK  299 (309)
Q Consensus       262 g----~~~~~~~~~~~~~l~~li~~Cl~~~P~~--RPt~~~l~~  299 (309)
                      +    ..+.. ....++++.+|+.+||..+|+.  ||++.++++
T Consensus       296 ~~~~~~~p~~-~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          296 HKERFQFPTQ-VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHCCCCSS-CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             ccccccCCcc-cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            1    11111 1235678999999999888888  999999864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2e-36  Score=281.12  Aligned_cols=233  Identities=17%  Similarity=0.170  Sum_probs=183.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .+.|...+.||+|+||+||+|.+  +++.||||.+...  .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            35688899999999999999998  7899999998543  2234577899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec---CCCcEEEeeccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN---EENVAKLFDFSF  209 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~  209 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++   .++.+||+|||+
T Consensus       101 e~~~~~~L~~~~~-------~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~  170 (486)
T 3mwu_A          101 ELYTGGELFDEII-------KRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGL  170 (486)
T ss_dssp             CCCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred             EcCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCc
Confidence            9999999999986       3467999999999999999999999   89999999999999995   556899999999


Q ss_pred             ccccCCCc---cccccccccccccccC-----CCcccHHHHHHHHhhccc------ccccccccccCCCCCCc--hHHHH
Q 045682          210 SISIPEGE---LLTGLRAFDLARLNED-----DGYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSG--KEQQL  273 (309)
Q Consensus       210 a~~~~~~~---~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~--~~~~~  273 (309)
                      +.......   ...|...|.+|+...+     .+.|+++..++.++.+..      ..+++..+..+......  ....+
T Consensus       171 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  250 (486)
T 3mwu_A          171 STCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTIS  250 (486)
T ss_dssp             TTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSC
T ss_pred             CeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCC
Confidence            98665433   2346666666665432     133444444444444332      22344444445443332  23557


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .++.+|+..||+.||.+|||+.++++
T Consensus       251 ~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          251 DDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            88999999999999999999999985

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.8e-36  Score=262.45  Aligned_cols=236  Identities=15%  Similarity=0.150  Sum_probs=175.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      +.|...+.||+|+||.||+|..  ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            5588899999999999999998  68999999987653 34457899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee---cCCCcEEEeeccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSI  211 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~  211 (309)
                      +++|+|.+++.....   ....+++..++.++.|++.||.|||   +.+|+||||||+||++   +.++.+||+|||++.
T Consensus       102 ~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~  175 (285)
T 3is5_A          102 CEGGELLERIVSAQA---RGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE  175 (285)
T ss_dssp             CSCCBHHHHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred             CCCCcHHHHHHhhhh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence            999999999853211   2467999999999999999999999   8999999999999999   456889999999997


Q ss_pred             ccCCCc---ccccccccccccccc-----CCCcccHHHHHHHHhhcccc------cccccccccCCCCCC-chHHHHHHH
Q 045682          212 SIPEGE---LLTGLRAFDLARLNE-----DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCS-GKEQQLQAY  276 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~-~~~~~~~~l  276 (309)
                      ......   ...|...|.+|+...     ..+.|+++..++.++.+...      .++............ .....++++
T Consensus       176 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (285)
T 3is5_A          176 LFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQA  255 (285)
T ss_dssp             C----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHH
T ss_pred             ecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHH
Confidence            654432   334555555555432     12344455555555443221      111111111111111 111235778


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||++|||+.|+++
T Consensus       256 ~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          256 VDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999999999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=2.7e-36  Score=262.56  Aligned_cols=234  Identities=16%  Similarity=0.228  Sum_probs=184.0

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---------chhHHHHHHHHHHHhhcc-CCcceeeeeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---------PRMYDCCINNIVYASQMI-HRCFFKLIGCCL  123 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~  123 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||+|.+....         ....+.+.+|+.++.++. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            347789999999999999999999  78999999986643         122456889999999995 999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEE
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~k  203 (309)
                      .++..++||||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+|
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~k  164 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLT-------EKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIK  164 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEE
T ss_pred             cCCeEEEEEeccCCCcHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEE
Confidence            9999999999999999999987       3467999999999999999999999   89999999999999999999999


Q ss_pred             EeecccccccCCCc---cccccccccccccc------------cCCCcccHHHHHHHHhhcccc------cccccccccC
Q 045682          204 LFDFSFSISIPEGE---LLTGLRAFDLARLN------------EDDGYVALRDHVKKYFEEDRL------NEIIDPLIMG  262 (309)
Q Consensus       204 l~Dfg~a~~~~~~~---~~~g~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g  262 (309)
                      |+|||++.......   ...|...+.+|+..            ...+.|+++..++.++.+...      .+.......+
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  244 (298)
T 1phk_A          165 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG  244 (298)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             EecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC
Confidence            99999998765433   23355555555432            123556666666666654322      1122222223


Q ss_pred             CCCCC--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DRSCS--GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~~--~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .....  .....+..+.+|+.+||+.||.+|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            22221  22356788999999999999999999999974

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=7.7e-37  Score=271.63  Aligned_cols=231  Identities=13%  Similarity=0.181  Sum_probs=175.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccC--CcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASK--PRMYDCCINNIVYASQMIH--RCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~l~g~~~~~~~~~lv  131 (309)
                      .+.|...+.||+|+||.||+|.. +++.||+|++....  ....+.+.+|+.++..++|  |||+++++++..++..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            35688899999999999999998 88999999987543  3445778999999999976  9999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      || +.+|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++ ++.+||+|||+++
T Consensus        88 ~e-~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~  155 (343)
T 3dbq_A           88 ME-CGNIDLNSWLK-------KKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIAN  155 (343)
T ss_dssp             EC-CCSEEHHHHHH-------HSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred             Ee-CCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccc
Confidence            99 56779999987       4567999999999999999999999   89999999999999997 6889999999998


Q ss_pred             ccCCCc------ccccccccccccccc-----------------CCCcccHHHHHHHHhhccccc-cc------cccccc
Q 045682          212 SIPEGE------LLTGLRAFDLARLNE-----------------DDGYVALRDHVKKYFEEDRLN-EI------IDPLIM  261 (309)
Q Consensus       212 ~~~~~~------~~~g~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~  261 (309)
                      ......      ...|...|.+|+...                 ..+.|+++..++.++.+.... ..      +.....
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  235 (343)
T 3dbq_A          156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID  235 (343)
T ss_dssp             CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC
T ss_pred             ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc
Confidence            764332      234666666666532                 124555565666555443221 11      111111


Q ss_pred             CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .......+...+.++.+|+..||+.||.+|||+.++++
T Consensus       236 ~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          236 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            11111122233467999999999999999999999974

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.4e-36  Score=270.07  Aligned_cols=235  Identities=17%  Similarity=0.192  Sum_probs=181.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCch-----------------hHHHHHHHHHHHhhccCCcceeee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPR-----------------MYDCCINNIVYASQMIHRCFFKLI  119 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~e~~~l~~l~h~niv~l~  119 (309)
                      .++|...+.||+|+||.||+|.++++.||+|.+......                 ....+.+|+.++.+++||||++++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            467999999999999999999999999999998653211                 117899999999999999999999


Q ss_pred             eeeeeCCceEEEEEeccCCChhhh------hhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCC
Q 045682          120 GCCLETQIPILVFEYINCGSLADR------IRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLS  192 (309)
Q Consensus       120 g~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~  192 (309)
                      +++.+.+..++||||+++|+|.++      +.     ......+++..++.++.|++.||.|||   + .+++|+||||+
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~-----~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~  181 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLD-----KNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPS  181 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSC-----SSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGG
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhh-----hccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChH
Confidence            999999999999999999999999      53     112578999999999999999999999   7 99999999999


Q ss_pred             CeeecCCCcEEEeecccccccCCC--ccccccccccccccccCC--------CcccHHHHHHHHhhcccc-------ccc
Q 045682          193 NILFNEENVAKLFDFSFSISIPEG--ELLTGLRAFDLARLNEDD--------GYVALRDHVKKYFEEDRL-------NEI  255 (309)
Q Consensus       193 Nill~~~~~~kl~Dfg~a~~~~~~--~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-------~~~  255 (309)
                      ||+++.++.+||+|||++......  ....|...+.+|+.....        +.|+++..++.++.+...       .++
T Consensus       182 Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  261 (348)
T 2pml_X          182 NILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL  261 (348)
T ss_dssp             GEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred             hEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence            999999999999999999875433  233455566666654433        334444444444443322       222


Q ss_pred             ccccccCCCCCCc-----------------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          256 IDPLIMGDRSCSG-----------------KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       256 ~~~~~~g~~~~~~-----------------~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ......+....+.                 ....+.++.+|+.+||+.||.+|||+.++++
T Consensus       262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            2223333222221                 0345688999999999999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.5e-36  Score=274.32  Aligned_cols=230  Identities=13%  Similarity=0.179  Sum_probs=176.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCC--chhHHHHHHHHHHHhhcc--CCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASK--PRMYDCCINNIVYASQMI--HRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ..|...+.||+|+||.||+|.. +++.||||.+....  ......+.+|+.++..++  ||||+++++++..++..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            4588899999999999999998 78999999986543  344577999999999995  599999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      | +.+++|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++ ++.+||+|||+++.
T Consensus       136 E-~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~  203 (390)
T 2zmd_A          136 E-CGNIDLNSWLK-------KKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQ  203 (390)
T ss_dssp             E-CCSEEHHHHHH-------HCSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCC
T ss_pred             e-cCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccc
Confidence            9 56789999987       4457899999999999999999999   99999999999999995 68999999999987


Q ss_pred             cCCCc------cccccccccccccccC-----------------CCcccHHHHHHHHhhcccccc-------cccccccC
Q 045682          213 IPEGE------LLTGLRAFDLARLNED-----------------DGYVALRDHVKKYFEEDRLNE-------IIDPLIMG  262 (309)
Q Consensus       213 ~~~~~------~~~g~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g  262 (309)
                      .....      ...|...|.+|+....                 .+.|+++..++.++.+.....       .+.....+
T Consensus       204 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~  283 (390)
T 2zmd_A          204 MQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP  283 (390)
T ss_dssp             C---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCT
T ss_pred             ccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCc
Confidence            64332      3346677777665322                 245556656666554432211       11112222


Q ss_pred             CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ......+...+.++.+|+..||+.||.+|||+.++++
T Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          284 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            2221122233577999999999999999999999974

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.1e-36  Score=282.62  Aligned_cols=233  Identities=16%  Similarity=0.173  Sum_probs=186.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .+.|...+.||+|+||.||+|..  +++.||||.+....   ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            35688899999999999999999  78999999986542   34567799999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee---cCCCcEEEeecc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFS  208 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg  208 (309)
                      |||+.+|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||+   +.++.+||+|||
T Consensus       105 ~e~~~~~~L~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  174 (484)
T 3nyv_A          105 GEVYTGGELFDEII-------SRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFG  174 (484)
T ss_dssp             ECCCCSCBHHHHHH-------TCSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred             EecCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence            99999999999986       5667999999999999999999999   8999999999999999   567899999999


Q ss_pred             cccccCCCc---ccccccccccccccc-----CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCc--hHHH
Q 045682          209 FSISIPEGE---LLTGLRAFDLARLNE-----DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSG--KEQQ  272 (309)
Q Consensus       209 ~a~~~~~~~---~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~--~~~~  272 (309)
                      ++.......   ...|...|.+|+...     ..+.|+++..++.++.+...      .+++..+..+......  ....
T Consensus       175 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  254 (484)
T 3nyv_A          175 LSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV  254 (484)
T ss_dssp             HHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGS
T ss_pred             eeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccC
Confidence            998765443   234555565555432     22455666666666544322      2334444445443332  2356


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++++.+|+.+||+.||.+|||+.++++
T Consensus       255 s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          255 SESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            788999999999999999999999974

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=8.3e-37  Score=264.79  Aligned_cols=241  Identities=20%  Similarity=0.273  Sum_probs=176.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe---CC--eEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC---QE--RLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~---~~--~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .++|...+.||+|+||.||+|.+   ++  ..||+|.+...   .....+.+.+|+.++.+++||||+++++++..+. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            35688899999999999999987   22  36899998754   2345678999999999999999999999998765 8


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++++|.+++...      ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||
T Consensus        96 ~~v~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg  166 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFG  166 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH------GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred             eeeEecccCCCHHHHHHhc------cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccc
Confidence            9999999999999998622      356899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCc-------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCc
Q 045682          209 FSISIPEGE-------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSG  268 (309)
Q Consensus       209 ~a~~~~~~~-------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~  268 (309)
                      ++.......       ...+...|.+|+...      ..+.|+++..++.++. +...      .+++..........+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  246 (291)
T 1u46_A          167 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR  246 (291)
T ss_dssp             TCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC
T ss_pred             ccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC
Confidence            998765432       122233344444322      2345566666666654 3221      1222222223223333


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +...+.++.+++.+||+.||.+|||+.++++.|+++...
T Consensus       247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence            345678899999999999999999999999999988654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.8e-37  Score=283.02  Aligned_cols=231  Identities=15%  Similarity=0.182  Sum_probs=174.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|+..+.||+|+||.||+|..  +++.||||.+...   .......+.+|+.++..++||||+++++++...+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            36688899999999999999998  7899999998653   233446688999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP-RPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |||+++|+|.+++.       ....+++..+..++.||+.||+|||   + .+|+||||||+|||++.++.+||+|||++
T Consensus       227 ~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a  296 (446)
T 4ejn_A          227 MEYANGGELFFHLS-------RERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLC  296 (446)
T ss_dssp             ECCCSSCBHHHHHH-------HHSCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCC
T ss_pred             EeeCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCc
Confidence            99999999999986       4467999999999999999999999   7 89999999999999999999999999999


Q ss_pred             cccCCC----cccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHHH
Q 045682          211 ISIPEG----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       211 ~~~~~~----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      +.....    ....|...|.+|+...      ..+.|+++..++.++.+...      .++...+..+....  +...+.
T Consensus       297 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~--p~~~~~  374 (446)
T 4ejn_A          297 KEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF--PRTLGP  374 (446)
T ss_dssp             CTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTSCH
T ss_pred             eeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCC--CccCCH
Confidence            864322    2345666666665432      22455666666666544321      22233333333222  224567


Q ss_pred             HHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      ++.+|+.+||+.||.+||     |+.++++
T Consensus       375 ~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          375 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            899999999999999999     9999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.9e-36  Score=274.08  Aligned_cols=234  Identities=16%  Similarity=0.153  Sum_probs=174.3

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--------chhHHHHHHHHHHHhhccCCcceeeeeeeee
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--------PRMYDCCINNIVYASQMIHRCFFKLIGCCLE  124 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  124 (309)
                      ...++|...+.||+|+||.||+|.+  +++.||+|.+....        ......+.+|+.++++++||||+++++++..
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            3467899999999999999999998  77999999986532        1112347899999999999999999999754


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC---Cc
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE---NV  201 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~---~~  201 (309)
                       +..++||||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.+   +.
T Consensus       212 -~~~~lv~e~~~~g~L~~~l~-------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~  280 (419)
T 3i6u_A          212 -EDYYIVLELMEGGELFDKVV-------GNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCL  280 (419)
T ss_dssp             -SEEEEEEECCTTCBGGGGTS-------SSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCC
T ss_pred             -CceEEEEEcCCCCcHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcce
Confidence             55899999999999999986       5567999999999999999999999   8999999999999999654   45


Q ss_pred             EEEeecccccccCCCc---ccccccccccccccc---------CCCcccHHHHHHHHhhccccc-------ccccccccC
Q 045682          202 AKLFDFSFSISIPEGE---LLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLN-------EIIDPLIMG  262 (309)
Q Consensus       202 ~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g  262 (309)
                      +||+|||+++......   ...|...|.+|+...         ..+.|+++..++.++.+....       .+.+....+
T Consensus       281 ~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~  360 (419)
T 3i6u_A          281 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG  360 (419)
T ss_dssp             EEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTT
T ss_pred             EEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcC
Confidence            9999999998765443   345666777776542         123445555555555443221       112222333


Q ss_pred             CCCCCch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DRSCSGK--EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~~~~--~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .....+.  ...+..+.+|+.+||+.||.+|||+.++++
T Consensus       361 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          361 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            3332211  134678999999999999999999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.2e-36  Score=265.22  Aligned_cols=235  Identities=14%  Similarity=0.194  Sum_probs=179.6

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ..+.|...+.||+|+||.||+|.+  ++..||+|.+..........+.+|+.++..++||||+++++++..++..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            446788899999999999999999  689999999987766667889999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++..      ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++...
T Consensus        97 ~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  167 (302)
T 2j7t_A           97 FCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN  167 (302)
T ss_dssp             CCTTEEHHHHHHH------HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred             eCCCCcHHHHHHh------hccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence            9999999999862      2456999999999999999999999   899999999999999999999999999987532


Q ss_pred             C----CCccccccccccccccc-----------cCCCcccHHHHHHHHhhcccccc------cccccccCCCC-CCchHH
Q 045682          214 P----EGELLTGLRAFDLARLN-----------EDDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRS-CSGKEQ  271 (309)
Q Consensus       214 ~----~~~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~-~~~~~~  271 (309)
                      .    ......|...+.+|+..           ...+.|+++..++.++.+.....      .+.....+..+ ...+..
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (302)
T 2j7t_A          168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK  247 (302)
T ss_dssp             HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGG
T ss_pred             cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccc
Confidence            1    11223455555555432           12355666666666655443221      11112222221 123345


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+.++.+|+.+||+.||.+|||+.++++
T Consensus       248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          248 WSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             SCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            6788999999999999999999999874

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.7e-36  Score=267.74  Aligned_cols=231  Identities=14%  Similarity=0.181  Sum_probs=172.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC----chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK----PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      .++|...+.||+|+||.||+|..     +++.||+|.+....    ......+.+|+.++..++||||+++++++..++.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46788999999999999999987     57899999987642    2334567899999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        96 ~~lv~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Df  165 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLE-------REGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDF  165 (327)
T ss_dssp             EEEEEECCTTEEHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCC
T ss_pred             EEEEEeCCCCCcHHHHHH-------hCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeC
Confidence            999999999999999986       3457899999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCC----ccccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHH
Q 045682          208 SFSISIPEG----ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       208 g~a~~~~~~----~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~  271 (309)
                      |+++.....    ....|...|.+|+....      .+.|+++..++.++.+...      .+.+..+..+....  +..
T Consensus       166 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~--p~~  243 (327)
T 3a62_A          166 GLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL--PPY  243 (327)
T ss_dssp             SCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC--CTT
T ss_pred             CcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC--CCC
Confidence            998764322    13346666666654322      2455666666666554322      12233333333222  124


Q ss_pred             HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      .+.++.+|+.+||+.||.+||     ++.++++
T Consensus       244 ~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            567899999999999999999     6667754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.6e-36  Score=282.24  Aligned_cols=233  Identities=14%  Similarity=0.146  Sum_probs=179.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .+.|...+.||+|+||+||+|.+  ++..||+|.+....  ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            34688899999999999999999  78999999987643  334577899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEEeeccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKLFDFSF  209 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~  209 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.   ++.+||+|||+
T Consensus       116 e~~~~g~L~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~  185 (494)
T 3lij_A          116 ECYKGGELFDEII-------HRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGL  185 (494)
T ss_dssp             ECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             ecCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCC
Confidence            9999999999986       4467999999999999999999999   899999999999999976   45599999999


Q ss_pred             ccccCCCc---ccccccccccccccc-----CCCcccHHHHHHHHhhccc------ccccccccccCCCCCCch--HHHH
Q 045682          210 SISIPEGE---LLTGLRAFDLARLNE-----DDGYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGK--EQQL  273 (309)
Q Consensus       210 a~~~~~~~---~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~--~~~~  273 (309)
                      +.......   ...|...|.+|+...     ..+.|+++..++.++.+..      ..+++..+..+......+  ...+
T Consensus       186 a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  265 (494)
T 3lij_A          186 SAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS  265 (494)
T ss_dssp             CEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSC
T ss_pred             CeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCC
Confidence            98765432   234556666665432     2244555555555554432      233444444444433322  2456


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .++.+|+.+||+.||.+|||+.++++
T Consensus       266 ~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          266 EGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHCCCChhhCccHHHHhc
Confidence            88999999999999999999999974

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2.7e-36  Score=281.41  Aligned_cols=234  Identities=17%  Similarity=0.128  Sum_probs=182.2

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-------------hhHHHHHHHHHHHhhccCCcceeeee
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-------------RMYDCCINNIVYASQMIHRCFFKLIG  120 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~g  120 (309)
                      ..+.|...+.||+|+||+||+|.+  ++..||+|.+.....             ...+.+.+|+.++++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            457799999999999999999998  678999999865421             23467899999999999999999999


Q ss_pred             eeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC
Q 045682          121 CCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN  200 (309)
Q Consensus       121 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~  200 (309)
                      ++.+++..++||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~-------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~  183 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQII-------NRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKN  183 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHH-------HHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTT
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCC
Confidence            9999999999999999999999986       3467999999999999999999999   89999999999999998776


Q ss_pred             ---cEEEeecccccccCCCc---ccccccccccccccc-----CCCcccHHHHHHHHhhccc------ccccccccccCC
Q 045682          201 ---VAKLFDFSFSISIPEGE---LLTGLRAFDLARLNE-----DDGYVALRDHVKKYFEEDR------LNEIIDPLIMGD  263 (309)
Q Consensus       201 ---~~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~  263 (309)
                         .+||+|||++.......   ...|...|.+|+...     ..+.|+++..++.++.+..      ..+++..+..+.
T Consensus       184 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  263 (504)
T 3q5i_A          184 SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGK  263 (504)
T ss_dssp             CCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred             CCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence               69999999998765442   334555666665432     2244555555555544332      233444444454


Q ss_pred             CCCCch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 RSCSGK--EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 ~~~~~~--~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .....+  ...+.++.+|+..||+.||.+|||+.++++
T Consensus       264 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          264 YYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            433322  234688999999999999999999999874

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-36  Score=274.63  Aligned_cols=147  Identities=24%  Similarity=0.346  Sum_probs=123.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCC--ce
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQ--IP  128 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~--~~  128 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||||++...  .......+.+|+.++..+. ||||+++++++...+  ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            457799999999999999999998  7899999998653  3345567889999999996 999999999997544  68


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||++ |+|.+++.        ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus        87 ~lv~e~~~-~~L~~~~~--------~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG  154 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIR--------ANILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFG  154 (388)
T ss_dssp             EEEEECCS-EEHHHHHH--------HTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEecccC-cCHHHHHH--------cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCc
Confidence            99999998 59999986        347899999999999999999999   8999999999999999999999999999


Q ss_pred             cccccC
Q 045682          209 FSISIP  214 (309)
Q Consensus       209 ~a~~~~  214 (309)
                      +|+...
T Consensus       155 ~a~~~~  160 (388)
T 3oz6_A          155 LSRSFV  160 (388)
T ss_dssp             TCEESS
T ss_pred             cccccc
Confidence            998653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.5e-36  Score=271.30  Aligned_cols=196  Identities=15%  Similarity=0.137  Sum_probs=159.0

Q ss_pred             cccccHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-----CCccee
Q 045682           45 YCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-----HRCFFK  117 (309)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~  117 (309)
                      ...+++.+.....++|...+.||+|+||.||+|.+  +++.||||.+.... .....+..|+.++..+.     ||||++
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            34466666666778999999999999999999999  78999999987542 44466788999999986     999999


Q ss_pred             eeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec
Q 045682          118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN  197 (309)
Q Consensus       118 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~  197 (309)
                      +++++...+..++||||+ +++|.+++...     ....+++..+..++.||+.||.|||   +.+|+||||||+|||++
T Consensus       101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  171 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRN-----NYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLD  171 (360)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHT-----TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred             ccceeeECCeeEEEEcCC-CCCHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEc
Confidence            999999999999999999 88999998632     3346999999999999999999999   99999999999999997


Q ss_pred             C-------------------------CCcEEEeecccccccCCC-cccccccccccccccc------CCCcccHHHHHHH
Q 045682          198 E-------------------------ENVAKLFDFSFSISIPEG-ELLTGLRAFDLARLNE------DDGYVALRDHVKK  245 (309)
Q Consensus       198 ~-------------------------~~~~kl~Dfg~a~~~~~~-~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~  245 (309)
                      .                         ++.+||+|||++...... ....|...|.+|+...      ..+.|+++..++.
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  251 (360)
T 3llt_A          172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE  251 (360)
T ss_dssp             CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             cccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence            5                         789999999999865432 2345566666665432      2355666666666


Q ss_pred             Hhhcc
Q 045682          246 YFEED  250 (309)
Q Consensus       246 ~~~~~  250 (309)
                      ++.+.
T Consensus       252 ll~g~  256 (360)
T 3llt_A          252 LYTGS  256 (360)
T ss_dssp             HHHSS
T ss_pred             HHHCC
Confidence            65543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.2e-37  Score=273.78  Aligned_cols=249  Identities=15%  Similarity=0.227  Sum_probs=185.0

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeC
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLET  125 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  125 (309)
                      ...+++....++|...+.||+|+||.||+|.+.+ .+|+|.+....  ....+.+.+|+.++.+++||||+++++++.+.
T Consensus        23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  101 (319)
T 2y4i_B           23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP  101 (319)
T ss_dssp             CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred             cccccccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            4455666677889999999999999999999855 48999986542  23345678899999999999999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      +..++||||+++++|.+++.      .....+++..++.++.|++.||.|||   +.+++|+||||+||+++ ++.+||+
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~------~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~  171 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVR------DAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVIT  171 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTT------SSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEEC
T ss_pred             CceEEEeecccCCcHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEe
Confidence            99999999999999999985      12346999999999999999999999   89999999999999998 7899999


Q ss_pred             ecccccccCCC---------cccccccccccccccc---------------CCCcccHHHHHHHHhhcccc------ccc
Q 045682          206 DFSFSISIPEG---------ELLTGLRAFDLARLNE---------------DDGYVALRDHVKKYFEEDRL------NEI  255 (309)
Q Consensus       206 Dfg~a~~~~~~---------~~~~g~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~------~~~  255 (309)
                      |||++......         ....|...+.+|+...               ..+.|+++..++.++.+...      ..+
T Consensus       172 Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  251 (319)
T 2y4i_B          172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI  251 (319)
T ss_dssp             CCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH
T ss_pred             ecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            99997654211         1233555555555432               22445555555555544322      122


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ......+..+.......+.++.+|+..||+.||++|||+.+|++.|+++.+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          252 IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             HHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            2223333333322224557799999999999999999999999999987754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.5e-36  Score=270.62  Aligned_cols=227  Identities=16%  Similarity=0.210  Sum_probs=180.0

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  129 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+..|..++..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            346799999999999999999999  57899999986531   23456788999999988 8999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|+|.+++.       ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        98 lv~E~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~  167 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQ-------QVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGM  167 (353)
T ss_dssp             EEEECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEeCCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCc
Confidence            9999999999999987       3457999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCC----CccccccccccccccccC------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCchHHHH
Q 045682          210 SISIPE----GELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       210 a~~~~~----~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      ++....    .....|...|.+|+....      .+.|+++..+++++.+...      .++...+..+....+  ...+
T Consensus       168 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s  245 (353)
T 2i0e_A          168 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP--KSMS  245 (353)
T ss_dssp             CBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--TTSC
T ss_pred             ccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC--CCCC
Confidence            986422    224456777777664332      2455666666666544322      233333343433222  3556


Q ss_pred             HHHHHHHHHcccCCCCCCCCH
Q 045682          274 QAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~  294 (309)
                      .++.+|+.+||+.||.+||++
T Consensus       246 ~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          246 KEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             HHHHHHHHHHTCSCTTSCTTC
T ss_pred             HHHHHHHHHHhhcCHHHcCCC
Confidence            889999999999999999964

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=2.5e-36  Score=270.09  Aligned_cols=242  Identities=15%  Similarity=0.162  Sum_probs=175.3

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCc-----------hhHHHHHHHHHHHhhccCCcc
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKP-----------RMYDCCINNIVYASQMIHRCF  115 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~h~ni  115 (309)
                      ....++....++|...+.||+|+||.||+|.. ++..||||++.....           ...+.+.+|+.++.+++||||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            45677888899999999999999999999998 889999999855321           123679999999999999999


Q ss_pred             eeeeeeeee-----CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCC
Q 045682          116 FKLIGCCLE-----TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFK  190 (309)
Q Consensus       116 v~l~g~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlk  190 (309)
                      +++++++..     ....++||||++ |+|.+++.      .....+++..+..++.||+.||.|||   +.+|+|||||
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk  161 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIH------DQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLH  161 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHH------CTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHH------hcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCC
Confidence            999999854     235799999998 58888875      23457999999999999999999999   8999999999


Q ss_pred             CCCeeecCCCcEEEeecccccccCCCc---cccccccccccccccC-------CCcccHHHHHHHHhhcccccc------
Q 045682          191 LSNILFNEENVAKLFDFSFSISIPEGE---LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNE------  254 (309)
Q Consensus       191 p~Nill~~~~~~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------  254 (309)
                      |+|||++.++.+||+|||++.......   ...|...|.+|+....       .+.|+++..++.++.+.....      
T Consensus       162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  241 (362)
T 3pg1_A          162 PGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN  241 (362)
T ss_dssp             GGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             hHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence            999999999999999999997554332   2345555555554322       244555555555554432111      


Q ss_pred             cccccc--------------------------cCCCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          255 IIDPLI--------------------------MGDRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       255 ~~~~~~--------------------------~g~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+....                          ....+...    ....++.+.+|+..||+.||.+|||+.++++
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            000000                          00000000    0122467899999999999999999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.5e-36  Score=266.41  Aligned_cols=235  Identities=17%  Similarity=0.183  Sum_probs=170.6

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-----hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-----RMYDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      ...++|...+.||+|+||.||+|.+  +++.||+|.+.....     .....+.+|+.++..++||||+++++++...+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            3457799999999999999999998  689999999875321     112468899999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+++ +|.+++.      .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        87 ~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Df  156 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIK------DNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADF  156 (346)
T ss_dssp             CEEEEECCSE-EHHHHHT------TCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             eEEEEEcCCC-CHHHHHH------hcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEec
Confidence            9999999986 8998875      23456899999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCc----cccccccccccccccCC-------CcccHHHHHHHHhhcccccc------ccccc-----------
Q 045682          208 SFSISIPEGE----LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNE------IIDPL-----------  259 (309)
Q Consensus       208 g~a~~~~~~~----~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~~~-----------  259 (309)
                      |+++......    ...|...|.+|+...+.       +.|+++..++.++.+.....      .+..+           
T Consensus       157 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~  236 (346)
T 1ua2_A          157 GLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ  236 (346)
T ss_dssp             GGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred             ccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhh
Confidence            9998764322    23455556666543322       34455555555554332210      00000           


Q ss_pred             -----------ccCCCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 -----------IMGDRSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 -----------~~g~~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                 ..+..+..+.    ...+.++.+|+..||+.||++|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence                       0000010000    133578999999999999999999999975

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=5.8e-36  Score=261.25  Aligned_cols=232  Identities=20%  Similarity=0.280  Sum_probs=181.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .+.|...+.||+|+||.||+|..  +++.||+|.+.... ....+.+.+|+.++..++||||+++++++..++..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35688899999999999999998  78999999987653 3456789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++.        ...+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++...
T Consensus       101 ~~~~~~L~~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  169 (303)
T 3a7i_A          101 YLGGGSALDLLE--------PGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL  169 (303)
T ss_dssp             CCTTEEHHHHHT--------TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             eCCCCcHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceec
Confidence            999999999985        457999999999999999999999   899999999999999999999999999999766


Q ss_pred             CCCc----ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------cccccccCCCCCCchHHHHHHHH
Q 045682          214 PEGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ....    ...|...|.+|+...      ..+.|+++..++.++.+.....      .......+..+ ..+...+..+.
T Consensus       170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~  248 (303)
T 3a7i_A          170 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP-TLEGNYSKPLK  248 (303)
T ss_dssp             BTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-CCCSSCCHHHH
T ss_pred             CccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC-CCccccCHHHH
Confidence            4332    234555555554432      2245566666666655433211      11111112111 11224557899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAKK  300 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~  300 (309)
                      +|+..||+.||.+|||+.++++.
T Consensus       249 ~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          249 EFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHcCCChhhCcCHHHHhhC
Confidence            99999999999999999999753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.4e-36  Score=261.93  Aligned_cols=238  Identities=15%  Similarity=0.173  Sum_probs=181.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~l  130 (309)
                      .++|...+.||+|+||.||+|..  +++.||+|.+....  ....+.+.+|+.++++++||||+++++++..  .+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35788899999999999999999  78999999987643  3445679999999999999999999998854  567899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-----eEeCCCCCCCeeecCCCcEEEe
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP-----VIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-----iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      ||||+++++|.+++.....   ....+++..++.++.|++.||.|||   +.+     ++|+||||+||+++.++.+||+
T Consensus        85 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~  158 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTK---ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLG  158 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEEC
T ss_pred             EEeCCCCCCHHHHHHhhcc---cCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEe
Confidence            9999999999999864321   2455999999999999999999999   777     9999999999999999999999


Q ss_pred             ecccccccCCCc----ccccccccccccccc------CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCch
Q 045682          206 DFSFSISIPEGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       206 Dfg~a~~~~~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~  269 (309)
                      |||++.......    ...|...+.+|+...      ..+.|+++..++.++.+...      .++...+..+..+.. +
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~-~  237 (279)
T 2w5a_A          159 DFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI-P  237 (279)
T ss_dssp             CCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-C
T ss_pred             cCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccC-C
Confidence            999998765432    234555555555332      23455666666666544322      122233333333222 2


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKL  301 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L  301 (309)
                      ...+.++.+++.+||+.||.+|||+.+|++.+
T Consensus       238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          238 YRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             cccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            25568899999999999999999999998654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.7e-36  Score=262.22  Aligned_cols=231  Identities=18%  Similarity=0.204  Sum_probs=180.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+...   .....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            35688899999999999999999  6789999998654   234456789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.
T Consensus        94 ~e~~~~~~L~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  163 (294)
T 2rku_A           94 LELCRRRSLLELHK-------RRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  163 (294)
T ss_dssp             EECCTTCBHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EecCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCce
Confidence            99999999999986       3457999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCC----cccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHH
Q 045682          212 SIPEG----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       212 ~~~~~----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .....    ....|...+.+++...      ..+.|+++..++.++.+....      +.......+...  .+...+..
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~  241 (294)
T 2rku_A          164 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPV  241 (294)
T ss_dssp             ECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC--CCTTSCHH
T ss_pred             ecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCC--CccccCHH
Confidence            75422    2334555555555432      234455555556555443221      111112222221  12245578


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||+.||++|||+.++++
T Consensus       242 ~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          242 AASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHcccChhhCcCHHHHhh
Confidence            999999999999999999999975

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.2e-36  Score=270.10  Aligned_cols=230  Identities=20%  Similarity=0.214  Sum_probs=178.0

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||+|.+......    ..+|+.++.++ +||||+++++++.+++..++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            346688999999999999999999  7899999999765422    35688888888 8999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC----CcEEEeecc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE----NVAKLFDFS  208 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg  208 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||+..+    +.+||+|||
T Consensus        96 E~~~gg~L~~~i~-------~~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg  165 (342)
T 2qr7_A           96 ELMKGGELLDKIL-------RQKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFG  165 (342)
T ss_dssp             CCCCSCBHHHHHH-------TCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred             eCCCCCcHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence            9999999999986       4567999999999999999999999   8999999999999998433    359999999


Q ss_pred             cccccCCCc----ccccccccccccccc------CCCcccHHHHHHHHhhcccc---------cccccccccCCCCCCc-
Q 045682          209 FSISIPEGE----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRL---------NEIIDPLIMGDRSCSG-  268 (309)
Q Consensus       209 ~a~~~~~~~----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~g~~~~~~-  268 (309)
                      +++......    ...|...|.+|+...      ..+.|+++..++.++.+...         .+++..+..+...... 
T Consensus       166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  245 (342)
T 2qr7_A          166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG  245 (342)
T ss_dssp             TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCST
T ss_pred             CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcc
Confidence            998654322    234455555555322      22455566666665544322         2233333334433221 


Q ss_pred             -hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 -KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 -~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       ....+.++.+|+..||+.||++|||+.++++
T Consensus       246 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          246 YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence             1245688999999999999999999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=270.80  Aligned_cols=238  Identities=12%  Similarity=0.128  Sum_probs=178.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-C---------CeEEEEEEecCCCchhHHHHHHHHHHHhhccCCccee---------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-Q---------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFK---------  117 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~---------  117 (309)
                      .++|...+.||+|+||.||+|.+ .         ++.||+|.+...     ..+.+|+.++.+++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            36788999999999999999998 2         688999998755     35789999999999999998         


Q ss_pred             ------eeeeeee-CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCC
Q 045682          118 ------LIGCCLE-TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFK  190 (309)
Q Consensus       118 ------l~g~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlk  190 (309)
                            +++++.. ++..++||||+ +++|.+++...     ....+++..++.++.||+.||.|||   +.+|+|||||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dik  186 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-----PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVT  186 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-----GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCC
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-----CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCC
Confidence                  5666665 67889999999 89999999721     2367999999999999999999999   8999999999


Q ss_pred             CCCeeecCCC--cEEEeecccccccCCCc-----------cccccccccccccccC------CCcccHHHHHHHHhhccc
Q 045682          191 LSNILFNEEN--VAKLFDFSFSISIPEGE-----------LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDR  251 (309)
Q Consensus       191 p~Nill~~~~--~~kl~Dfg~a~~~~~~~-----------~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  251 (309)
                      |+|||++.++  .+||+|||+++......           ...|...|.+|+....      .+.|+++..++.++.+..
T Consensus       187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  266 (352)
T 2jii_A          187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL  266 (352)
T ss_dssp             GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999998  99999999997654322           2245555555554322      244555555555544432


Q ss_pred             cccccc--------c---cccCCCC----CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          252 LNEIID--------P---LIMGDRS----CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       252 ~~~~~~--------~---~~~g~~~----~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ...-..        .   .......    .......+.++.+|+..||+.||++|||+.+|++.|+++.+..
T Consensus       267 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  338 (352)
T 2jii_A          267 PWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL  338 (352)
T ss_dssp             TTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             CcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence            111100        0   0000000    0000123588999999999999999999999999999998764

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=4.2e-36  Score=287.64  Aligned_cols=244  Identities=16%  Similarity=0.224  Sum_probs=186.3

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      .....++|...+.||+|+||.||+|.+     .+..||+|.+.... ....+.+.+|+.++.+++||||++++|++. ++
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~  463 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN  463 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence            334456788889999999999999998     23679999987653 344477999999999999999999999985 45


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++||||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~------~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~D  534 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQV------RKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD  534 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHH------TTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC
T ss_pred             ceEEEEEcCCCCcHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEe
Confidence            68999999999999999862      2346899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCcc-----cccccccccccccc------CCCcccHHHHHHHHhh-cccc------cccccccccCCCCCCc
Q 045682          207 FSFSISIPEGEL-----LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------NEIIDPLIMGDRSCSG  268 (309)
Q Consensus       207 fg~a~~~~~~~~-----~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~g~~~~~~  268 (309)
                      ||+++.......     ..+...|.+|+...      ..+.|+++..+++++. +...      .+++..+..+.... .
T Consensus       535 FG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~-~  613 (656)
T 2j0j_A          535 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-M  613 (656)
T ss_dssp             CCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC-C
T ss_pred             cCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC-C
Confidence            999987654331     22333455554322      2355666666666553 3211      12223333333322 2


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +..++..+.+|+.+||+.||++|||+.+|++.|+++...
T Consensus       614 ~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            235668899999999999999999999999999998754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=5.1e-36  Score=258.92  Aligned_cols=238  Identities=15%  Similarity=0.180  Sum_probs=181.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            4588889999999999999999  689999999865421      23577999999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC----cEEEe
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN----VAKLF  205 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~----~~kl~  205 (309)
                      +||||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++    .+||+
T Consensus        85 lv~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~  154 (283)
T 3bhy_A           85 LILELVSGGELFDFLA-------EKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLI  154 (283)
T ss_dssp             EEEECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred             EEEeecCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEE
Confidence            9999999999999986       3457999999999999999999999   89999999999999998877    89999


Q ss_pred             ecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCc--
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSG--  268 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~--  268 (309)
                      |||++.......   ...|...+.+|+...      ..+.|+++..++.++.+....      +.+.....+......  
T Consensus       155 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T 3bhy_A          155 DFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY  234 (283)
T ss_dssp             CCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHH
T ss_pred             ecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchh
Confidence            999998764432   223555555555332      234555665666655443221      112222222222111  


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK--KLKQMY  305 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~--~L~~l~  305 (309)
                      ....+..+.+|+.+||+.||++|||+.++++  .++.+.
T Consensus       235 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          235 FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            1234577999999999999999999999986  455544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3.4e-36  Score=260.32  Aligned_cols=230  Identities=17%  Similarity=0.210  Sum_probs=181.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|..  ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            5688899999999999999999  67899999986532   223467899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++..
T Consensus        94 e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~  163 (284)
T 2vgo_A           94 EFAPRGELYKELQ-------KHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVH  163 (284)
T ss_dssp             CCCTTEEHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EeCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEeccccccc
Confidence            9999999999987       3456899999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCC--cccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHHHHH
Q 045682          213 IPEG--ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       213 ~~~~--~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ....  ....|...+.+|+...      ..+.|+++..++.++.+....      +.......+....  +...+..+.+
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  241 (284)
T 2vgo_A          164 APSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF--PPFLSDGSKD  241 (284)
T ss_dssp             CSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC--CTTSCHHHHH
T ss_pred             CcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCC--CCcCCHHHHH
Confidence            5432  2334555555554322      335566666666665543221      1112222222211  1245578999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++..||+.||.+|||+.++++
T Consensus       242 li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          242 LISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhhcCHhhCCCHHHHhh
Confidence            999999999999999999985

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=267.83  Aligned_cols=232  Identities=16%  Similarity=0.147  Sum_probs=169.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch-hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR-MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+...... ....+.+|+.+++.++||||+++++++..++..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            4688889999999999999999  7899999998764322 122456799999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++ +|.+++..      ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        82 ~~~-~l~~~~~~------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           82 LDK-DLKQYLDD------CGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKS  151 (324)
T ss_dssp             CSE-EHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred             ccc-CHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence            984 99999862      3456999999999999999999999   8999999999999999999999999999997654


Q ss_pred             CCc----cccccccccccccccC-------CCcccHHHHHHHHhhcccccc------ccccccc--CCC-----------
Q 045682          215 EGE----LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNE------IIDPLIM--GDR-----------  264 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--g~~-----------  264 (309)
                      ...    ...|...|.+|+...+       .+.|+++..++.++.+.....      .+..+..  +..           
T Consensus       152 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  231 (324)
T 3mtl_A          152 IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN  231 (324)
T ss_dssp             -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             CCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcc
Confidence            221    2234555555554322       244555555555554432110      0000000  000           


Q ss_pred             --------C---CC----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 --------S---CS----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 --------~---~~----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                              +   ..    .....+.++.+|+.+||+.||.+|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                    0   00    00123467899999999999999999999975

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=7.2e-36  Score=270.65  Aligned_cols=229  Identities=15%  Similarity=0.169  Sum_probs=169.7

Q ss_pred             cCCCcc-CceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeee----CCceE
Q 045682           58 NNYDSE-KVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE----TQIPI  129 (309)
Q Consensus        58 ~~~~~~-~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~----~~~~~  129 (309)
                      ++|... +.||+|+||+||+|.+  +++.||||++...     ..+.+|+.++.++ +||||+++++++..    ....+
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            445544 6899999999999999  7899999998643     4567888887555 89999999999875    56789


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEEee
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKLFD  206 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl~D  206 (309)
                      +||||+++|+|.+++..     .....+++..+..++.||+.||.|||   +.+|+||||||+|||++.   ++.+||+|
T Consensus       136 lv~E~~~gg~L~~~l~~-----~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~D  207 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD  207 (400)
T ss_dssp             EEEECCCSEEHHHHHHC-----C---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred             EEEEeCCCCcHHHHHHH-----hCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEe
Confidence            99999999999999861     12346999999999999999999999   899999999999999987   78999999


Q ss_pred             cccccccCCCc---cccccccccccccccC------CCcccHHHHHHHHhhcccccc----------cccccccCCCCCC
Q 045682          207 FSFSISIPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNE----------IIDPLIMGDRSCS  267 (309)
Q Consensus       207 fg~a~~~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~  267 (309)
                      ||+++......   ...|...|.+++....      .+.|+++..++.++.+.....          ....+..+....+
T Consensus       208 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~  287 (400)
T 1nxk_A          208 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP  287 (400)
T ss_dssp             CTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC
T ss_pred             cccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC
Confidence            99998765432   3345555666665432      245566666666655433211          1112222333222


Q ss_pred             c--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          268 G--KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       268 ~--~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .  ....+.++.+|+.+||+.||++|||+.++++
T Consensus       288 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1  1345688999999999999999999999985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.6e-37  Score=269.11  Aligned_cols=244  Identities=18%  Similarity=0.221  Sum_probs=183.8

Q ss_pred             cccHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeee
Q 045682           47 TFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCL  123 (309)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  123 (309)
                      .++..++....+.|...+.||+|+||.||+|.+  +++.||+|.+.... .....+.+|+.++.++ +||||+++++++.
T Consensus        13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            345555556778899999999999999999999  78999999987653 3346789999999999 8999999999997


Q ss_pred             e------CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec
Q 045682          124 E------TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN  197 (309)
Q Consensus       124 ~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~  197 (309)
                      .      .+..++||||+++|+|.+++...     ....+++..++.++.||+.||.|||   +.+++|+||||+||+++
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~  163 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-----KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLT  163 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTEEHHHHHHHS-----GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEC
T ss_pred             eccCccccceEEEEEEcCCCCcHHHHHHhc-----ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEc
Confidence            6      46789999999999999998632     2357899999999999999999999   89999999999999999


Q ss_pred             CCCcEEEeecccccccCCC----cccccccccccccccc-----------CCCcccHHHHHHHHhhcccccc------cc
Q 045682          198 EENVAKLFDFSFSISIPEG----ELLTGLRAFDLARLNE-----------DDGYVALRDHVKKYFEEDRLNE------II  256 (309)
Q Consensus       198 ~~~~~kl~Dfg~a~~~~~~----~~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~------~~  256 (309)
                      .++.+||+|||++......    ....|...|.+|+...           ..+.|+++..++.++.+.....      ..
T Consensus       164 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  243 (326)
T 2x7f_A          164 ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL  243 (326)
T ss_dssp             TTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             CCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            9999999999998765432    2334555555555422           2356777777777765543211      11


Q ss_pred             cccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          257 DPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       257 ~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .....+..+.......+..+.+|+.+||+.||.+|||+.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          244 FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            1111122222222245678999999999999999999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1e-35  Score=262.67  Aligned_cols=226  Identities=14%  Similarity=0.155  Sum_probs=172.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeeee--CCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLE--TQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~--~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+....   .+.+.+|+.++..+. ||||+++++++.+  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            6688899999999999999988  78999999987543   467899999999996 9999999999987  66789999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeeccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSI  211 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~  211 (309)
                      ||+++++|.+++.          .+++..+..++.|++.||.|||   +.+|+||||||+|||++.++ .+||+|||++.
T Consensus       113 e~~~~~~l~~~~~----------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~  179 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ----------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  179 (330)
T ss_dssp             ECCCCCCHHHHGG----------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eccCchhHHHHHH----------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence            9999999999974          4889999999999999999999   89999999999999999776 89999999998


Q ss_pred             ccCCCc---cccccccccccccccC-------CCcccHHHHHHHHhhccccc-c-------------------ccccccc
Q 045682          212 SIPEGE---LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLN-E-------------------IIDPLIM  261 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~  261 (309)
                      ......   ...|...+.+|+....       .+.|+++..++.++.+.... .                   ..+....
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  259 (330)
T 3nsz_A          180 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK  259 (330)
T ss_dssp             ECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence            664432   3345555555554332       24455555555554433211 0                   0000000


Q ss_pred             CC----------------------CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 GD----------------------RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 g~----------------------~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..                      .....+...+.++.+|+..||+.||.+|||+.++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00                      000111124678999999999999999999999985

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.6e-36  Score=267.34  Aligned_cols=231  Identities=18%  Similarity=0.209  Sum_probs=181.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|...+.||+|+||.||++.+  +++.||+|.+...   .....+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            46788899999999999999999  6789999998654   234456789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++.
T Consensus       120 ~e~~~~~~L~~~~~-------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  189 (335)
T 2owb_A          120 LELCRRRSLLELHK-------RRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  189 (335)
T ss_dssp             ECCCTTCBHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EecCCCCCHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCce
Confidence            99999999999986       3467999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCC----cccccccccccccccc------CCCcccHHHHHHHHhhccccc------ccccccccCCCCCCchHHHHHH
Q 045682          212 SIPEG----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       212 ~~~~~----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .....    ....|...|.+++...      ..+.|+++..++.++.+....      +.......+....  +...+.+
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~  267 (335)
T 2owb_A          190 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI--PKHINPV  267 (335)
T ss_dssp             ECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CTTSCHH
T ss_pred             ecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCC--CccCCHH
Confidence            76422    2334555555555322      234556666666665543221      1111222222211  2244577


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||+.||++|||+.++++
T Consensus       268 ~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          268 AASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999999975

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=5.3e-36  Score=263.84  Aligned_cols=232  Identities=16%  Similarity=0.151  Sum_probs=176.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc--------hhHHHHHHHHHHHhhccCCcceeeeeeeeeCC
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP--------RMYDCCINNIVYASQMIHRCFFKLIGCCLETQ  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  126 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||.+.....        .....+.+|+.++.+++||||+++++++..+.
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            45688899999999999999998  689999999865421        12245889999999999999999999987655


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc---EE
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV---AK  203 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~---~k  203 (309)
                       .++||||+++++|.+++.       ....+++..+..++.||+.||.|||   +.+++||||||+|||++.++.   +|
T Consensus        89 -~~lv~e~~~~~~L~~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~k  157 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVV-------GNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIK  157 (322)
T ss_dssp             -EEEEEECCTTEETHHHHS-------TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEE
T ss_pred             -eEEEEecCCCCcHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEE
Confidence             899999999999999986       4567999999999999999999999   899999999999999987654   99


Q ss_pred             EeecccccccCCCc---cccccccccccccc---------cCCCcccHHHHHHHHhhccccc-------ccccccccCCC
Q 045682          204 LFDFSFSISIPEGE---LLTGLRAFDLARLN---------EDDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDR  264 (309)
Q Consensus       204 l~Dfg~a~~~~~~~---~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~  264 (309)
                      |+|||++.......   ...|...|.+|+..         ...+.|+++..++.++.+....       .+.+....+..
T Consensus       158 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  237 (322)
T 2ycf_A          158 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY  237 (322)
T ss_dssp             ECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC
T ss_pred             EccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc
Confidence            99999998776543   23455666666542         1234566666666665543321       11222222333


Q ss_pred             CCCc--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 SCSG--KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 ~~~~--~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...+  ....+..+.+|+.+||+.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            2221  1234678999999999999999999999974

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=8.1e-36  Score=275.11  Aligned_cols=230  Identities=15%  Similarity=0.166  Sum_probs=169.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  126 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||++...  .....+.+.+|+.+++.++||||+++++++....      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46788899999999999999998  7899999999764  3345577899999999999999999999997543      


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++||||+++ +|.+.+.         ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       141 ~~~lv~E~~~~-~l~~~~~---------~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~D  207 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQ---------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD  207 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHT---------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred             eEEEEEeCCCC-CHHHHHh---------hcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEE
Confidence            56999999986 5666653         34899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------ccccccc--C-------
Q 045682          207 FSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLIM--G-------  262 (309)
Q Consensus       207 fg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--g-------  262 (309)
                      ||+++......   ...|...|.+|+...      ..+.|+++..+++++.+.....      .+..+..  |       
T Consensus       208 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~  287 (464)
T 3ttj_A          208 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM  287 (464)
T ss_dssp             CCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred             EEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            99998765442   234555566655432      2355666666666654432211      0000000  0       


Q ss_pred             ------------------CC-----------CC--CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 ------------------DR-----------SC--SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ------------------~~-----------~~--~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                        ..           +.  ......+.++.+|+.+||+.||++|||+.|+++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                              00           00  001122677999999999999999999999975

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.7e-37  Score=279.57  Aligned_cols=242  Identities=17%  Similarity=0.137  Sum_probs=186.3

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeee
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCC  122 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~  122 (309)
                      +.+.++....++|+..+.||+|+||.||+|..  +++.||+|++....   ......+.+|..++..++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            34555556678899999999999999999999  78999999986532   12234588999999999999999999999


Q ss_pred             eeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          123 LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      .+.+..++||||+++|+|.+++...      ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~------~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~v  201 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKF------GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHI  201 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHH------SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCE
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCE
Confidence            9999999999999999999999622      347999999999999999999999   8999999999999999999999


Q ss_pred             EEeecccccccCCCc-----ccccccccccccccc-------------CCCcccHHHHHHHHhhcccc------cccccc
Q 045682          203 KLFDFSFSISIPEGE-----LLTGLRAFDLARLNE-------------DDGYVALRDHVKKYFEEDRL------NEIIDP  258 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~-----~~~g~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~------~~~~~~  258 (309)
                      ||+|||+++......     ...|...|.+|+...             ..+.|+++..+++++.+...      .+....
T Consensus       202 kL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~  281 (412)
T 2vd5_A          202 RLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGK  281 (412)
T ss_dssp             EECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             EEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999998765432     245777777766432             23556666666666544322      122222


Q ss_pred             cccCC--CCCC-chHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 045682          259 LIMGD--RSCS-GKEQQLQAYAHLIFECVNESPVDR---PTMVDVAK  299 (309)
Q Consensus       259 ~~~g~--~~~~-~~~~~~~~l~~li~~Cl~~~P~~R---Pt~~~l~~  299 (309)
                      +..+.  ...+ .+...+.++.+|+.+||. +|.+|   |++.+|++
T Consensus       282 i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          282 IVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             HHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             HHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            22111  1111 112456889999999999 99998   58888863

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=3.2e-36  Score=260.97  Aligned_cols=236  Identities=14%  Similarity=0.158  Sum_probs=168.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-hh-HHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-RM-YDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~-~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .++|+..+.||+|+||.||+|.+  +++.||+|++..... .. ...+.++...++.++||||+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46788899999999999999999  889999999976532 22 233455555677889999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      ||+++ +|.+++.....   ....+++..++.++.|++.||.|||   +. +++||||||+||+++.++.+||+|||++.
T Consensus        86 e~~~~-~l~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVID---KGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISG  158 (290)
T ss_dssp             ECCSE-EHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred             ehhcc-chHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcc
Confidence            99985 88888753211   3567999999999999999999999   87 99999999999999999999999999997


Q ss_pred             ccCCCc---ccccccccccccccc----------CCCcccHHHHHHHHhhcccccc-------cccccccCCCCCCchHH
Q 045682          212 SIPEGE---LLTGLRAFDLARLNE----------DDGYVALRDHVKKYFEEDRLNE-------IIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~  271 (309)
                      ......   ...|...+.+|+...          ..+.|+++..++.++.+.....       .+........+......
T Consensus       159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (290)
T 3fme_A          159 YLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK  238 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTT
T ss_pred             cccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCccccc
Confidence            664432   234666666666531          1234455555555544332111       11112222222222335


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+.++.+|+.+||+.||++|||+.++++
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          239 FSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            6688999999999999999999999975

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=9e-36  Score=261.24  Aligned_cols=233  Identities=20%  Similarity=0.258  Sum_probs=177.7

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ..+.|+..+.||+|+||.||+|.+  +++.||+|.+....  ....+.+|+.++..++||||+++++++...+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            456788899999999999999999  68999999987653  34678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+++++|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++...
T Consensus       105 ~~~~~~L~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  175 (314)
T 3com_A          105 YCGAGSVSDIIRL------RNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL  175 (314)
T ss_dssp             CCTTEEHHHHHHH------HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCCCCHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence            9999999999852      2457899999999999999999999   899999999999999999999999999999765


Q ss_pred             CCC----cccccccccccccccc------CCCcccHHHHHHHHhhccccccccc------ccccC-CCCCCchHHHHHHH
Q 045682          214 PEG----ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEIID------PLIMG-DRSCSGKEQQLQAY  276 (309)
Q Consensus       214 ~~~----~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g-~~~~~~~~~~~~~l  276 (309)
                      ...    ....|...|.+|+...      ..+.|+++..++.++.+.....-.+      ....+ ......+...+..+
T Consensus       176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (314)
T 3com_A          176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNF  255 (314)
T ss_dssp             BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred             hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHH
Confidence            432    1234555555555322      3356667777777665543221111      00111 11112233456889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+..||+.||.+|||+.++++
T Consensus       256 ~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          256 TDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHccCChhhCcCHHHHHh
Confidence            99999999999999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.2e-36  Score=267.74  Aligned_cols=231  Identities=13%  Similarity=0.128  Sum_probs=170.0

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  126 (309)
                      .+.|...+.||+|+||.||+|.+  +++.||||++...  .....+.+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46788899999999999999998  7899999998654  2344567899999999999999999999997653      


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++||||+ +++|.+++.        ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       104 ~~~lv~e~~-~~~L~~~~~--------~~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~D  171 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMK--------HEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILD  171 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHH--------HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             eEEEEEecC-CCCHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEe
Confidence            469999999 779999986        246899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc-ccccccccccccccc-------CCCcccHHHHHHHHhhcccccc------ccccccc--CCCC-----
Q 045682          207 FSFSISIPEGE-LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNE------IIDPLIM--GDRS-----  265 (309)
Q Consensus       207 fg~a~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--g~~~-----  265 (309)
                      ||+++...... ...|...|.+|+...       ..+.|+++..++.++.+.....      .+..+..  |..+     
T Consensus       172 fg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~  251 (367)
T 1cm8_A          172 FGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ  251 (367)
T ss_dssp             CTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             eecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            99998764432 234455555554322       2355666666666655433211      0000000  0000     


Q ss_pred             ------------------C----CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          266 ------------------C----SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       266 ------------------~----~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                        .    ......+..+.+|+.+||+.||.+|||+.++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence                              0    000133577999999999999999999999975

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=6.4e-36  Score=260.29  Aligned_cols=233  Identities=15%  Similarity=0.233  Sum_probs=174.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee----------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE----------  124 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----------  124 (309)
                      .++|+..+.||+|+||.||+|..  +++.||+|.+... ....+.+.+|+.++.+++||||+++++++.+          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            45688899999999999999998  7899999998653 2445778999999999999999999998865          


Q ss_pred             ---CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc
Q 045682          125 ---TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV  201 (309)
Q Consensus       125 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~  201 (309)
                         .+..++||||+++|+|.+++..      ....+++..++.++.|++.||.|||   +.+++|+||||+|||++.++.
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~  154 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHS------ENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRN  154 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHH------SCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhc------cccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCC
Confidence               3568999999999999999862      2456888999999999999999999   899999999999999999999


Q ss_pred             EEEeecccccccCCC------------------ccccccccccccccccC-------CCcccHHHHHHHHhhccc----c
Q 045682          202 AKLFDFSFSISIPEG------------------ELLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDR----L  252 (309)
Q Consensus       202 ~kl~Dfg~a~~~~~~------------------~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~----~  252 (309)
                      +||+|||++......                  ....|...+.+|+....       .+.|+++..++.++....    .
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~  234 (303)
T 1zy4_A          155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMER  234 (303)
T ss_dssp             EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH
T ss_pred             EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhH
Confidence            999999999765421                  12234555555554322       244555555555543211    1


Q ss_pred             cccccccccC--CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          253 NEIIDPLIMG--DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       253 ~~~~~~~~~g--~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+........  ..+...+...+..+.+|+.+||+.||.+|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            1111111111  1122222345677999999999999999999999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.5e-35  Score=256.95  Aligned_cols=235  Identities=15%  Similarity=0.198  Sum_probs=171.7

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-----chhHHHHHHHHHHHhhcc---CCcceeeeeeeeeC
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-----PRMYDCCINNIVYASQMI---HRCFFKLIGCCLET  125 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~~  125 (309)
                      ..++|...+.||+|+||+||+|.+  +++.||+|.+....     ......+.+|+.++..+.   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357899999999999999999997  78999999986432     122346777888877774   99999999999875


Q ss_pred             C-----ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC
Q 045682          126 Q-----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN  200 (309)
Q Consensus       126 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~  200 (309)
                      .     ..++||||+. |+|.+++...     ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~  157 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKA-----PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGG  157 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTC-----CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTS
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCC
Confidence            5     4799999998 5999998621     3344999999999999999999999   89999999999999999999


Q ss_pred             cEEEeecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhccccc------cccccccc----
Q 045682          201 VAKLFDFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIM----  261 (309)
Q Consensus       201 ~~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~----  261 (309)
                      .+||+|||+++......   ...|...|.+|+...      ..+.|+++..++.++.+....      +.+..+..    
T Consensus       158 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  237 (308)
T 3g33_A          158 TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL  237 (308)
T ss_dssp             CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             CEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            99999999998664432   334555565555322      234566666666665443211      00000000    


Q ss_pred             --------------CCCC---CCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 --------------GDRS---CSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 --------------g~~~---~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    +..+   ...    ....+.++.+|+.+||+.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence                          0000   000    0123577899999999999999999999975

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=3.3e-36  Score=270.31  Aligned_cols=233  Identities=7%  Similarity=-0.076  Sum_probs=160.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHHHhhc--cCCcceeee-------eee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVYASQM--IHRCFFKLI-------GCC  122 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l--~h~niv~l~-------g~~  122 (309)
                      ..+|...+.||+|+||.||+|.+  +++.||+|++.....   ...+.+.+|+.++..+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            34588899999999999999998  789999999987542   3345677886555555  699988755       344


Q ss_pred             eeC-----------------CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHH------HHHHHHHHHHHHHhhcC
Q 045682          123 LET-----------------QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR------LKIAKDIANAIAYLHVG  179 (309)
Q Consensus       123 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~------~~i~~~ia~~l~yLH~~  179 (309)
                      ...                 ...++||||++ |+|.+++...      ...+.+..+      +.++.||+.||+|||  
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~------~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH--  211 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL------DFVYVFRGDEGILALHILTAQLIRLAANLQ--  211 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH------HHSCCCCHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh------ccccchhhhhhhhhHHHHHHHHHHHHHHHH--
Confidence            332                 23799999999 7999999733      223455555      788899999999999  


Q ss_pred             CCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc-cccccccccccccccC--------CCcccHHHHHHHHhhcc
Q 045682          180 FPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-LLTGLRAFDLARLNED--------DGYVALRDHVKKYFEED  250 (309)
Q Consensus       180 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  250 (309)
                       +.+|+||||||+|||++.++.+||+|||+++...... ...+...|.+|+....        .+.|+++..++.++.+.
T Consensus       212 -~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~  290 (371)
T 3q60_A          212 -SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF  290 (371)
T ss_dssp             -HTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred             -HCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence             8999999999999999999999999999998776544 3344455666554432        23455555555555443


Q ss_pred             cccccc--------c-----ccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          251 RLNEII--------D-----PLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       251 ~~~~~~--------~-----~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ....-.        .     .........+.....+..+.+|+.+||+.||++|||+.++++
T Consensus       291 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          291 LPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            221111        0     000111122222355688999999999999999999999973

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.1e-35  Score=266.32  Aligned_cols=232  Identities=12%  Similarity=0.138  Sum_probs=175.7

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----Cc
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----QI  127 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~  127 (309)
                      ..++|...+.||+|+||.||+|.+  ++..||+|++.... ......+.+|+.++.+++||||+++++++...     ..
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            356799999999999999999998  78999999997643 33447789999999999999999999999754     36


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+.+ +|.+++.        ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       105 ~~iv~e~~~~-~L~~~l~--------~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Df  172 (364)
T 3qyz_A          105 VYIVQDLMET-DLYKLLK--------TQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF  172 (364)
T ss_dssp             EEEEEECCSE-EHHHHHH--------HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             EEEEEcccCc-CHHHHHH--------hCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeC
Confidence            8999999985 9999985        346999999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCc-------ccccccccccccccc-------CCCcccHHHHHHHHhhccccc------cccccccc--CCC-
Q 045682          208 SFSISIPEGE-------LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLN------EIIDPLIM--GDR-  264 (309)
Q Consensus       208 g~a~~~~~~~-------~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--g~~-  264 (309)
                      |++.......       ...|...|.+|+...       ..+.|+++..++.++.+....      +.+..+..  |.. 
T Consensus       173 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  252 (364)
T 3qyz_A          173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS  252 (364)
T ss_dssp             TTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCC
T ss_pred             cceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            9998765432       224555566665322       224455555556555443221      11111000  000 


Q ss_pred             ----------------------CCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 ----------------------SCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 ----------------------~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                            ....    ....+.++.+|+.+||+.||++|||+.++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                                  0000    0123467899999999999999999999975

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=269.77  Aligned_cols=238  Identities=15%  Similarity=0.139  Sum_probs=170.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCCchh-----------HHHHHHHHHHHhhccCCcceeeee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASKPRM-----------YDCCINNIVYASQMIHRCFFKLIG  120 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~l~g  120 (309)
                      .++|...+.||+|+||.||+|.+     ++..+|+|.+.......           ...+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            35688899999999999999998     35789999987654221           123668888999999999999999


Q ss_pred             eeee----CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee
Q 045682          121 CCLE----TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF  196 (309)
Q Consensus       121 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill  196 (309)
                      ++..    ....++||||+ +++|.+++.       ....+++..++.++.||+.||.|||   +.+|+||||||+|||+
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll  184 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISG-------QNGTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLL  184 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCB-------GGGBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEE
Confidence            9987    67899999999 889999986       3448999999999999999999999   8999999999999999


Q ss_pred             cCCC--cEEEeecccccccCCC-----------ccccccccccccccccC------CCcccHHHHHHHHhhccccc-ccc
Q 045682          197 NEEN--VAKLFDFSFSISIPEG-----------ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLN-EII  256 (309)
Q Consensus       197 ~~~~--~~kl~Dfg~a~~~~~~-----------~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~  256 (309)
                      +.++  .+||+|||+++.....           ....|...|.+|+....      .+.|+++..++.++.+.... ...
T Consensus       185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~  264 (345)
T 2v62_A          185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL  264 (345)
T ss_dssp             ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT
T ss_pred             ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence            8887  9999999999765332           12345556666554322      24455555555554433221 100


Q ss_pred             -c-----c---cccCCCCCC-----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          257 -D-----P---LIMGDRSCS-----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       257 -~-----~---~~~g~~~~~-----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                       +     .   ......+..     .....+.++.+++..||+.||++|||+.+|++.|+++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          265 KDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             TCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             cccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence             0     0   000000000     00033468999999999999999999999999997653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=8e-36  Score=265.76  Aligned_cols=232  Identities=16%  Similarity=0.176  Sum_probs=171.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee--------C
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE--------T  125 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--------~  125 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|++....  ......+.+|+.++..++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5688899999999999999999  78999999986543  2334678899999999999999999999987        3


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      +..++||||+++ +|.+.+.      .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~------~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~  166 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLS------NVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLA  166 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHH------CTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             ceEEEEEeccCC-CHHHHHh------hccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEc
Confidence            468999999986 7777775      23456999999999999999999999   8999999999999999999999999


Q ss_pred             ecccccccCCC--------ccccccccccccccccC-------CCcccHHHHHHHHhhccccccccc------cc--ccC
Q 045682          206 DFSFSISIPEG--------ELLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEIID------PL--IMG  262 (309)
Q Consensus       206 Dfg~a~~~~~~--------~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~g  262 (309)
                      |||+++.....        ....|...|.+|+...+       .+.|+++..++.++.+.....-.+      .+  ..+
T Consensus       167 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  246 (351)
T 3mi9_A          167 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG  246 (351)
T ss_dssp             CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             cchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence            99999765421        12234555555554322       234555555555544332211000      00  000


Q ss_pred             CCCC-----------------------CchH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DRSC-----------------------SGKE-----QQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~-----------------------~~~~-----~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.                       ....     ..++.+.+|+.+||+.||++|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            0000                       0000     01456889999999999999999999975

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=7.2e-36  Score=262.08  Aligned_cols=231  Identities=17%  Similarity=0.177  Sum_probs=167.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeee-----------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL-----------  123 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~-----------  123 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+........+.+.+|+.++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            36788899999999999999999  58999999998776666788999999999999999999998873           


Q ss_pred             ---eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec-CC
Q 045682          124 ---ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN-EE  199 (309)
Q Consensus       124 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~-~~  199 (309)
                         +....++||||++ |+|.+++.        ...+++..++.++.|++.||+|||   +.+|+||||||+||+++ .+
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLE--------QGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHT--------TCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTT
T ss_pred             cccccCceeEEeeccC-CCHHHHhh--------cCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCC
Confidence               3467899999998 59999985        457899999999999999999999   89999999999999997 56


Q ss_pred             CcEEEeecccccccCCCc-------cccccccccccccccC-------CCcccHHHHHHHHhhccccccc------cccc
Q 045682          200 NVAKLFDFSFSISIPEGE-------LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEI------IDPL  259 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~-------~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~~  259 (309)
                      +.+||+|||++.......       ...+...+.+|+....       .+.|+++..++.++.+.....-      +...
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  237 (320)
T 2i6l_A          158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI  237 (320)
T ss_dssp             TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            799999999998754321       2223344444443222       2445555555555544322110      0000


Q ss_pred             ccC------------------------CCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 IMG------------------------DRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ~~g------------------------~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...                        ..+...    ....+.++.+|+.+||+.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            000                        000000    0124578999999999999999999999975

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.4e-35  Score=257.34  Aligned_cols=232  Identities=13%  Similarity=0.167  Sum_probs=175.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC----chhHHHHHHHHHHHhhccCCcceeeeeeee--eCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK----PRMYDCCINNIVYASQMIHRCFFKLIGCCL--ETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~--~~~~~  128 (309)
                      .++|...+.||+|+||.||+|.+  ++..||+|.+....    ......+.+|+.++..++||||+++++++.  +....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            46899999999999999999998  78899999986542    234567999999999999999999999984  45678


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||++++ |.+++...     ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||
T Consensus        84 ~lv~e~~~~~-l~~~~~~~-----~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg  154 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSV-----PEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALG  154 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHS-----TTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EEEehhccCC-HHHHHHhC-----cccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccc
Confidence            9999999975 77776522     3467999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCC------ccccccccccccccccC--------CCcccHHHHHHHHhhcccc------cccccccccCCCCCCc
Q 045682          209 FSISIPEG------ELLTGLRAFDLARLNED--------DGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSG  268 (309)
Q Consensus       209 ~a~~~~~~------~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~  268 (309)
                      ++......      ....|...+.+|+....        .+.|+++..++.++.+...      .+....+..+....  
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--  232 (305)
T 2wtk_C          155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI--  232 (305)
T ss_dssp             TCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--
T ss_pred             cccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCC--
Confidence            99876432      12335555666554322        2444555555555543321      12222222232221  


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +..++..+.+|+.+||+.||.+|||+.++++
T Consensus       233 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          233 PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            2245678999999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.1e-35  Score=264.86  Aligned_cols=231  Identities=15%  Similarity=0.151  Sum_probs=173.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----Cce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----QIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  128 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||.+.... ......+.+|+.++..++||||+++++++..+     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46788999999999999999998  68999999997543 33456788999999999999999999988764     678


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+. |+|.+++.        ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus        90 ~lv~e~~~-~~L~~~~~--------~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  157 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIS--------TQMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFG  157 (353)
T ss_dssp             EEEECCCS-EEHHHHHH--------HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEEeccC-ccHHHHHh--------hcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecc
Confidence            99999998 59999985        346999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCc--------------cccccccccccccccC-------CCcccHHHHHHHHhhcccccccccc------c--
Q 045682          209 FSISIPEGE--------------LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEIIDP------L--  259 (309)
Q Consensus       209 ~a~~~~~~~--------------~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~--  259 (309)
                      ++.......              ...|...|.+|+....       .+.|+++..++.++.+.....-.+.      .  
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  237 (353)
T 2b9h_A          158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG  237 (353)
T ss_dssp             TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence            998764321              1234555666654322       2344555555555443322110000      0  


Q ss_pred             ccC------------------------CCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 IMG------------------------DRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ~~g------------------------~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..|                        ..+...    ....+.++.+|+.+||+.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            000                        000000    0134577899999999999999999999975

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=2.7e-35  Score=255.18  Aligned_cols=220  Identities=10%  Similarity=0.009  Sum_probs=175.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.++.+++||||+++++++..++..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            6699999999999999999999  58999999997653   233477999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++.       . + .....+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+++|+.. 
T Consensus       111 e~~~g~~L~~~l~-------~-~-~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~-  177 (286)
T 3uqc_A          111 EWIRGGSLQEVAD-------T-S-PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMP-  177 (286)
T ss_dssp             ECCCEEEHHHHHT-------T-C-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCT-
T ss_pred             EecCCCCHHHHHh-------c-C-CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccC-
Confidence            9999999999985       2 2 355678899999999999999   8999999999999999999999999776542 


Q ss_pred             cCCCccccccccccccccccCCCcccHHHHHHHHhhcccccccc---------cccccCCCCCC--chHHHHHHHHHHHH
Q 045682          213 IPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEII---------DPLIMGDRSCS--GKEQQLQAYAHLIF  281 (309)
Q Consensus       213 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~--~~~~~~~~l~~li~  281 (309)
                                      ......+.|+++..++.++.+.....-.         .....+..+..  .....+.++.+|+.
T Consensus       178 ----------------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  241 (286)
T 3uqc_A          178 ----------------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAA  241 (286)
T ss_dssp             ----------------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHH
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHH
Confidence                            1122337788888888887654332111         11112222111  11245678999999


Q ss_pred             HcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          282 ECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +||+.||++| |+.++++.|+.+...
T Consensus       242 ~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          242 RSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             HHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             HHcccCCccC-CHHHHHHHHHHHhcc
Confidence            9999999999 999999999987643

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=9.3e-36  Score=262.94  Aligned_cols=243  Identities=16%  Similarity=0.120  Sum_probs=182.0

Q ss_pred             cHHHHHHHhcCCCcc-CceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhc-cCCcceeeeeee
Q 045682           49 SAKELEIATNNYDSE-KVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQM-IHRCFFKLIGCC  122 (309)
Q Consensus        49 ~~~~~~~~~~~~~~~-~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~g~~  122 (309)
                      .++..+...+.|... +.||+|+||.||+|..  +++.||+|.+....  ......+.+|+.++..+ .||||+++++++
T Consensus        19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            333444455667666 7899999999999998  68999999987642  33457799999999999 679999999999


Q ss_pred             eeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---C
Q 045682          123 LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---E  199 (309)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~  199 (309)
                      ...+..++||||+++|+|.+++.     ......+++..++.++.|++.||.|||   +.+|+||||||+|||++.   +
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~  170 (327)
T 3lm5_A           99 ENTSEIILILEYAAGGEIFSLCL-----PELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPL  170 (327)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGGS-----SCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTB
T ss_pred             EeCCeEEEEEEecCCCcHHHHHH-----HhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCC
Confidence            99999999999999999999985     123467999999999999999999999   899999999999999987   7


Q ss_pred             CcEEEeecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhccccc------cccccccc--C
Q 045682          200 NVAKLFDFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLN------EIIDPLIM--G  262 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--g  262 (309)
                      +.+||+|||++.......   ...|...|.+|+...      ..+.|+++..++.++.+....      +.......  .
T Consensus       171 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  250 (327)
T 3lm5_A          171 GDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV  250 (327)
T ss_dssp             CCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             CcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc
Confidence            899999999998765432   234555666655432      224556666666665543221      11111111  1


Q ss_pred             CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..+.......+..+.+|+..||+.||.+|||+.++++
T Consensus       251 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          251 DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            1222222355678999999999999999999999874

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.7e-36  Score=268.42  Aligned_cols=236  Identities=16%  Similarity=0.145  Sum_probs=168.9

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC----
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ----  126 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~----  126 (309)
                      ++...++|...+.||+|+||.||+|.+  +++.||+|++......    ..+|+.+++.++||||+++++++...+    
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            345667899999999999999999998  7899999998665322    237999999999999999999985432    


Q ss_pred             ----------------------------------ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHH
Q 045682          127 ----------------------------------IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANA  172 (309)
Q Consensus       127 ----------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~  172 (309)
                                                        ..++||||+++ +|.+.+....   .....+++..+..++.||+.|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~---~~~~~l~~~~~~~i~~qi~~a  153 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFI---RSGRSIPMNLISIYIYQLFRA  153 (383)
T ss_dssp             --------------------------------CCEEEEEECCCSE-EHHHHHHHHH---HTTCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHH---hcCCCCCHHHHHHHHHHHHHH
Confidence                                              37899999995 8777765221   145679999999999999999


Q ss_pred             HHHhhcCCCCCeEeCCCCCCCeeec-CCCcEEEeecccccccCCCc---cccccccccccccccCC-------CcccHHH
Q 045682          173 IAYLHVGFPRPVIFRDFKLSNILFN-EENVAKLFDFSFSISIPEGE---LLTGLRAFDLARLNEDD-------GYVALRD  241 (309)
Q Consensus       173 l~yLH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~~-------~~~~~~~  241 (309)
                      |.|||   +.+|+||||||+|||++ .++.+||+|||+++......   ...|...|.+|+...+.       +.|+++.
T Consensus       154 L~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~  230 (383)
T 3eb0_A          154 VGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC  230 (383)
T ss_dssp             HHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred             HHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence            99999   99999999999999997 68999999999998764433   33445555555543322       3455555


Q ss_pred             HHHHHhhcccccc------ccccccc--C-----------------CCCC---C-----chHHHHHHHHHHHHHcccCCC
Q 045682          242 HVKKYFEEDRLNE------IIDPLIM--G-----------------DRSC---S-----GKEQQLQAYAHLIFECVNESP  288 (309)
Q Consensus       242 ~~~~~~~~~~~~~------~~~~~~~--g-----------------~~~~---~-----~~~~~~~~l~~li~~Cl~~~P  288 (309)
                      .++.++.+.....      .+..+..  |                 ..+.   .     .+...+.++.+|+.+||+.||
T Consensus       231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  310 (383)
T 3eb0_A          231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP  310 (383)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence            5555544332111      0000000  0                 0000   0     011245679999999999999


Q ss_pred             CCCCCHHHHHH
Q 045682          289 VDRPTMVDVAK  299 (309)
Q Consensus       289 ~~RPt~~~l~~  299 (309)
                      .+|||+.|+++
T Consensus       311 ~~R~t~~e~l~  321 (383)
T 3eb0_A          311 DLRINPYEAMA  321 (383)
T ss_dssp             GGSCCHHHHHT
T ss_pred             hhCCCHHHHhc
Confidence            99999999974

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.4e-36  Score=264.78  Aligned_cols=243  Identities=17%  Similarity=0.255  Sum_probs=166.2

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      ....++|...+.||+|+||.||+|.+  +++.||+|.+.... ....+.+.+|+.++.+++||||+++++++...+..++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            34567899999999999999999998  78999999986543 3345678899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          131 VFEYINCGSLADRIRIQHN-PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~-~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      ||||+++++|.+++..... .......+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||+
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            9999999999999863211 1113466999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc---------cccccccccccccc-------cCCCcccHHHHHHHHhhccccccc------ccccccCCCCC-
Q 045682          210 SISIPEGE---------LLTGLRAFDLARLN-------EDDGYVALRDHVKKYFEEDRLNEI------IDPLIMGDRSC-  266 (309)
Q Consensus       210 a~~~~~~~---------~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~-  266 (309)
                      +.......         ...|...|.+|+..       ...+.|+++..++.++.+......      ......+..+. 
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  247 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL  247 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence            87654321         22345555555432       223556666666666554322111      10011111110 


Q ss_pred             -------CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          267 -------SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       267 -------~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                             ......+.++.+|+.+||+.||.+|||+.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                   011234577999999999999999999999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.8e-36  Score=270.68  Aligned_cols=230  Identities=18%  Similarity=0.194  Sum_probs=172.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHH-HhhccCCcceeeeeeeeeCCceEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVY-ASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .++|...+.||+|+||.||+|++  ++..||+|.+....   ......+..|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            36688999999999999999999  67899999986642   2233456677776 567899999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.+|.+||+|||++
T Consensus       117 v~E~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a  186 (373)
T 2r5t_A          117 VLDYINGGELFYHLQ-------RERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLC  186 (373)
T ss_dssp             EEECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBC
T ss_pred             EEeCCCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccc
Confidence            999999999999987       3457899999999999999999999   899999999999999999999999999999


Q ss_pred             cccCC----CccccccccccccccccC------CCcccHHHHHHHHhhccc------ccccccccccCCCCCCchHHHHH
Q 045682          211 ISIPE----GELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       211 ~~~~~----~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      +....    .....|...|.+++....      .+.|+++..+++++.+..      ..++...+..+....+  ...+.
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~  264 (373)
T 2r5t_A          187 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK--PNITN  264 (373)
T ss_dssp             GGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC--SSSCH
T ss_pred             cccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC--CCCCH
Confidence            86322    224556666766664332      345666666666654432      2233333333332221  24567


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                      ++.+|+..||+.||.+||++.+.+
T Consensus       265 ~~~~li~~lL~~dp~~R~~~~~~~  288 (373)
T 2r5t_A          265 SARHLLEGLLQKDRTKRLGAKDDF  288 (373)
T ss_dssp             HHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred             HHHHHHHHHcccCHHhCCCCCCCH
Confidence            899999999999999999986433

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=3.8e-35  Score=262.84  Aligned_cols=242  Identities=14%  Similarity=0.162  Sum_probs=183.2

Q ss_pred             HHhcCCCccCceeecCCeEEEEEE-----e--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc---CCcceeeeeeeee
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGF-----C--QERLISVMKFDASKPRMYDCCINNIVYASQMI---HRCFFKLIGCCLE  124 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~-----~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~  124 (309)
                      ...++|...+.||+|+||.||+|.     .  +++.||+|.+....   ...+..|+.++..+.   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345668888899999999999994     3  78999999997654   346777777777775   9999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC------
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE------  198 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~------  198 (309)
                      ++..++||||+++|+|.+++.....  .....+++..++.++.||+.||+|||   +.+|+||||||+|||++.      
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~  213 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKN--TPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQD  213 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHT--STTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhc--ccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcc
Confidence            9999999999999999999864321  13467999999999999999999999   999999999999999998      


Q ss_pred             -----CCcEEEeecccccccC---CCc---cccccccccccccccC------CCcccHHHHHHHHhhcccccccccc---
Q 045682          199 -----ENVAKLFDFSFSISIP---EGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIIDP---  258 (309)
Q Consensus       199 -----~~~~kl~Dfg~a~~~~---~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---  258 (309)
                           ++.+||+|||+|+...   ...   ...|...|.+|+...+      .+.|+++..+++++.+......-+.   
T Consensus       214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  293 (365)
T 3e7e_A          214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC  293 (365)
T ss_dssp             -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred             ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence                 8999999999996542   221   2346666766664433      2456666666666655432111100   


Q ss_pred             cccCCCCCCchHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHHHHh
Q 045682          259 LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDR-PTMVDVAKKLKQMYRS  307 (309)
Q Consensus       259 ~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~R-Pt~~~l~~~L~~l~~~  307 (309)
                      .........   ...+.+.+++..|++.+|.+| |++.++.+.|+++...
T Consensus       294 ~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          294 KPEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             EECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             eechhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            000111111   224678899999999999999 7888888888887654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=4e-35  Score=255.66  Aligned_cols=217  Identities=16%  Similarity=0.212  Sum_probs=170.7

Q ss_pred             cCCCcc-CceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhh-ccCCcceeeeeeeee----CCceE
Q 045682           58 NNYDSE-KVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQ-MIHRCFFKLIGCCLE----TQIPI  129 (309)
Q Consensus        58 ~~~~~~-~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~g~~~~----~~~~~  129 (309)
                      ++|... +.||+|+||.||+|.+  +++.||+|.+...     ..+.+|+.++.+ .+||||+++++++..    +...+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            556655 7799999999999998  7899999998643     457788888844 599999999999876    66789


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEEee
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKLFD  206 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl~D  206 (309)
                      +||||+++|+|.+++...     ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|
T Consensus        92 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDR-----GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             EEECCCCSCBHHHHHHHC-----TTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             EEEeecCCCcHHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence            999999999999998632     3357999999999999999999999   899999999999999998   78999999


Q ss_pred             cccccccCCCccccccccccccccccCCCcccHHHHHHHHhhcccccc----------cccccccCCCCCCch--HHHHH
Q 045682          207 FSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNE----------IIDPLIMGDRSCSGK--EQQLQ  274 (309)
Q Consensus       207 fg~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~--~~~~~  274 (309)
                      ||++.......            .....+.|+++..++.++.+.....          .......+....+.+  ...+.
T Consensus       164 fg~a~~~~~~~------------~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (299)
T 3m2w_A          164 FGFAKETTGEK------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  231 (299)
T ss_dssp             CTTCEECTTCG------------GGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCH
T ss_pred             ccccccccccc------------CCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCH
Confidence            99997654311            1122377888888888876543221          112222222222211  23568


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+|+.+||+.||.+|||+.++++
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhc
Confidence            8999999999999999999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=9.7e-36  Score=278.95  Aligned_cols=233  Identities=15%  Similarity=0.199  Sum_probs=182.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+....   ......+.+|+.+|..++||||+++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            46688889999999999999999  78999999986531   23346688999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++...     ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus       263 mEy~~gg~L~~~l~~~-----~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~  334 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHM-----GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAV  334 (576)
T ss_dssp             ECCCCSCBHHHHHHSS-----SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEcCCCCcHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccce
Confidence            9999999999998621     2345999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCc---cccccccccccccccC------CCcccHHHHHHHHhhcccccc----------cccccccCCCCCCchHHH
Q 045682          212 SIPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNE----------IIDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~  272 (309)
                      ......   ...|...|.+|+....      .+.|+++..+++++.+.....          +...+......  .+...
T Consensus       335 ~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~--~p~~~  412 (576)
T 2acx_A          335 HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE--YSERF  412 (576)
T ss_dssp             ECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC--CCTTS
T ss_pred             ecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc--CCccC
Confidence            876543   2356666666664332      345666666666655443221          11111111111  12345


Q ss_pred             HHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      +.++.+|+..||+.||.+||     ++.+|++
T Consensus       413 s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          413 SPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            68899999999999999999     6777763

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.1e-35  Score=266.41  Aligned_cols=231  Identities=14%  Similarity=0.133  Sum_probs=160.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeC------C
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLET------Q  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~  126 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||++...  .....+.+.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            47799999999999999999998  7899999998664  234557789999999999999999999998654      5


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++|+||+ +++|.+++.        ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       108 ~~~lv~e~~-~~~L~~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~D  175 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVK--------CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD  175 (367)
T ss_dssp             CCEEEEECC-CEECC-------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             eEEEEeccc-CCCHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEee
Confidence            679999999 579999975        357999999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCC-cccccccccccccccc-------CCCcccHHHHHHHHhhccccccc------cccccc--CC-------
Q 045682          207 FSFSISIPEG-ELLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEI------IDPLIM--GD-------  263 (309)
Q Consensus       207 fg~a~~~~~~-~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--g~-------  263 (309)
                      ||+++..... ....|...|.+|+...       ..+.|+++..++.++.+.....-      +..+..  |.       
T Consensus       176 FG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~  255 (367)
T 2fst_X          176 FGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  255 (367)
T ss_dssp             ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred             ccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            9999875432 2234555555555322       23556666666666654422110      000000  00       


Q ss_pred             ----------------CCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 ----------------RSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 ----------------~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                      .+....    ...++.+.+|+.+||+.||.+|||+.++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence                            000000    022467899999999999999999999974

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=5.4e-35  Score=270.25  Aligned_cols=239  Identities=15%  Similarity=0.181  Sum_probs=178.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccC-CcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIH-RCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||.+.....  ..++..|+.++..+.| ++++.+..++......++|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46799999999999999999998  789999998765532  2357899999999966 566666667777888999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee---cCCCcEEEeecccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFS  210 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a  210 (309)
                      |+ +++|.+++..      ....+++..++.|+.||+.||.|||   +.+|+||||||+||||   +.++.+||+|||++
T Consensus        84 ~~-g~sL~~ll~~------~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla  153 (483)
T 3sv0_A           84 LL-GPSLEDLFNF------CSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA  153 (483)
T ss_dssp             CC-CCBHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             CC-CCCHHHHHHh------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence            99 8899999862      2457999999999999999999999   8999999999999999   68899999999999


Q ss_pred             cccCCCc-----------cccccccccccccccC------CCcccHHHHHHHHhhccccccccc---------ccccCCC
Q 045682          211 ISIPEGE-----------LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIID---------PLIMGDR  264 (309)
Q Consensus       211 ~~~~~~~-----------~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~g~~  264 (309)
                      +......           ...|...|.+++....      .+.|+++..++.++.+.....-..         .+.....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~  233 (483)
T 3sv0_A          154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV  233 (483)
T ss_dssp             EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH
T ss_pred             eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc
Confidence            8764432           3445666665554332      244555555555554332211100         0000000


Q ss_pred             CCC---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          265 SCS---GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       265 ~~~---~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ...   ....++.++.+|+..||+.+|++||++.+|++.|+++...
T Consensus       234 ~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          234 ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence            000   0012357899999999999999999999999999998764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-36  Score=268.71  Aligned_cols=230  Identities=16%  Similarity=0.186  Sum_probs=180.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC----chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK----PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQI  127 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~  127 (309)
                      ++|...+.||+|+||.||+|..     +++.||||.+....    ......+.+|+.++..+ +||||+++++++..++.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            6788899999999999999997     67999999986532    22345677899999999 69999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       134 ~~lv~e~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Df  203 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLS-------QRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDF  203 (355)
T ss_dssp             EEEEECCCCSCBHHHHHH-------HHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCS
T ss_pred             EEEEeecCCCCCHHHHHH-------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeC
Confidence            999999999999999986       3457999999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCc-----cccccccccccccccC--------CCcccHHHHHHHHhhcccccc----------cccccccCCC
Q 045682          208 SFSISIPEGE-----LLTGLRAFDLARLNED--------DGYVALRDHVKKYFEEDRLNE----------IIDPLIMGDR  264 (309)
Q Consensus       208 g~a~~~~~~~-----~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~  264 (309)
                      |+++......     ...|...|.+|+....        .+.|+++..++.++.+.....          +.........
T Consensus       204 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  283 (355)
T 1vzo_A          204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP  283 (355)
T ss_dssp             SEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC
T ss_pred             CCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC
Confidence            9998654322     2346666666654332        245566666666655443211          1111111221


Q ss_pred             CCCchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045682          265 SCSGKEQQLQAYAHLIFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       265 ~~~~~~~~~~~l~~li~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      +  .+...+..+.+|+.+||+.||.+||     |+.++++
T Consensus       284 ~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~  321 (355)
T 1vzo_A          284 P--YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  321 (355)
T ss_dssp             C--CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             C--CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence            1  1234567899999999999999999     8998875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=3.1e-35  Score=264.07  Aligned_cols=230  Identities=12%  Similarity=0.138  Sum_probs=171.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce----
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP----  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~----  128 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46788899999999999999998  78999999997643  33457789999999999999999999999876654    


Q ss_pred             --EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          129 --ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       129 --~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                        ++||||+. ++|.+++.         ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       121 ~~~lv~e~~~-~~l~~~~~---------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~D  187 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG---------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILD  187 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT---------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECS
T ss_pred             eEEEEEcccc-ccHHHHhh---------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEe
Confidence              99999998 58888863         45999999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc-ccccccccccccccc-------CCCcccHHHHHHHHhhccccccc------cccccc--C--------
Q 045682          207 FSFSISIPEGE-LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEI------IDPLIM--G--------  262 (309)
Q Consensus       207 fg~a~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--g--------  262 (309)
                      ||+++...... ...|...|.+|+...       ..+.|+++..++.++.+.....-      +.....  +        
T Consensus       188 fg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  267 (371)
T 4exu_A          188 FGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ  267 (371)
T ss_dssp             TTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             cCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence            99998654332 234555555555332       23556666666666554322110      000000  0        


Q ss_pred             ---------------CCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 ---------------DRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 ---------------~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                     ..+...    ....+..+.+|+.+||+.||++|||+.++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence                           000000    0123578999999999999999999999974

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=2.2e-35  Score=255.63  Aligned_cols=234  Identities=17%  Similarity=0.168  Sum_probs=182.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ..++|...+.||+|+||.||+|..  +++.||+|.+...  .......+.+|+.++++++||||+++++++...+..++|
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            346799999999999999999999  7899999998653  234567899999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC---CcEEEeecc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE---NVAKLFDFS  208 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg  208 (309)
                      |||+++++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||||+||+++.+   +.+||+|||
T Consensus       100 ~e~~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg  169 (287)
T 2wei_A          100 GELYTGGELFDEII-------KRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFG  169 (287)
T ss_dssp             ECCCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred             EEccCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccC
Confidence            99999999999986       3457899999999999999999999   8999999999999999754   479999999


Q ss_pred             cccccCCCc---ccccccccccccccc-----CCCcccHHHHHHHHhhcccc------cccccccccCCCCCCch--HHH
Q 045682          209 FSISIPEGE---LLTGLRAFDLARLNE-----DDGYVALRDHVKKYFEEDRL------NEIIDPLIMGDRSCSGK--EQQ  272 (309)
Q Consensus       209 ~a~~~~~~~---~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~--~~~  272 (309)
                      ++.......   ...|...+.+|+...     ..+.|+++..++.++.+...      .++......+......+  ...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (287)
T 2wei_A          170 LSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI  249 (287)
T ss_dssp             GGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTS
T ss_pred             cceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhc
Confidence            998664432   122334444444322     23556666666666554322      22233333343332221  245


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          273 LQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.++.+++.+||+.||++|||+.++++
T Consensus       250 ~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          250 SDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            678999999999999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=5e-35  Score=261.30  Aligned_cols=244  Identities=14%  Similarity=0.117  Sum_probs=166.4

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      ........++|...+.||+|+||.||+|.+  ++..||||++.... .....+.+++..+..++||||+++++++...+.
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~   93 (360)
T 3e3p_A           15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE   93 (360)
T ss_dssp             SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred             hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence            344566778999999999999999999998  68999999986543 233456788888999999999999999976443


Q ss_pred             -------eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-C
Q 045682          128 -------PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-E  199 (309)
Q Consensus       128 -------~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~  199 (309)
                             .++||||+++ +|.+.+....   .....+++..+..++.|++.||.|||.. +.+|+||||||+|||++. +
T Consensus        94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~  168 (360)
T 3e3p_A           94 RDRRDIYLNVVMEYVPD-TLHRCCRNYY---RRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEAD  168 (360)
T ss_dssp             SCTTCEEEEEEEECCSC-BHHHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTT
T ss_pred             ccccceeEEEEeecccc-cHHHHHHHHh---hcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCC
Confidence                   7899999997 5554443211   1456789999999999999999999944 679999999999999996 8


Q ss_pred             CcEEEeecccccccCCCc---cccccccccccccccC-------CCcccHHHHHHHHhhcccccc------ccccccc--
Q 045682          200 NVAKLFDFSFSISIPEGE---LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNE------IIDPLIM--  261 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--  261 (309)
                      +.+||+|||++.......   ...|...|.+|+....       .+.|+++..++.++.+.....      .+.....  
T Consensus       169 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~  248 (360)
T 3e3p_A          169 GTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL  248 (360)
T ss_dssp             TEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             CcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence            999999999998765433   3345555666654322       244555555555554432110      0000000  


Q ss_pred             C---------------------CCCCC-------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 G---------------------DRSCS-------GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 g---------------------~~~~~-------~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +                     .....       .....+.++.+|+.+||+.||.+|||+.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            0                     00000       00124678999999999999999999999974

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=5.7e-35  Score=262.31  Aligned_cols=230  Identities=14%  Similarity=0.131  Sum_probs=169.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  126 (309)
                      .++|...+.||+|+||.||+|..  +++.||||++...  .......+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            36799999999999999999998  7899999998764  2344567899999999999999999999997654      


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++||||+++ +|.+++.         ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       104 ~~~lv~e~~~~-~l~~~~~---------~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~D  170 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ---------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD  170 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH---------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             ceEEEEEcCCC-CHHHHHh---------hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEE
Confidence            67999999985 8888874         34899999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------cccccccCC--------
Q 045682          207 FSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLIMGD--------  263 (309)
Q Consensus       207 fg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~--------  263 (309)
                      ||+++......   ...|...|.+|+...      ..+.|+++..++.++.+.....      .+..+....        
T Consensus       171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  250 (371)
T 2xrw_A          171 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM  250 (371)
T ss_dssp             CCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHH
T ss_pred             eecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            99998765432   234555555555332      3355666666676665432211      000000000        


Q ss_pred             ------------------------------CCC--CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          264 ------------------------------RSC--SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       264 ------------------------------~~~--~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                                    .+.  ......+.++.+|+.+||+.||++|||+.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence                                          000  001233678999999999999999999999985

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-35  Score=260.03  Aligned_cols=236  Identities=19%  Similarity=0.204  Sum_probs=171.6

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch------hHHHHHHHHHHHhhc----cCCcceeee
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR------MYDCCINNIVYASQM----IHRCFFKLI  119 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~l~  119 (309)
                      +.....++|...+.||+|+||.||+|.+  +++.||+|.+......      ....+.+|+.++.++    +||||++++
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            3445568899999999999999999998  7899999998765321      223456799999998    899999999


Q ss_pred             eeeeeCCceEEEEEe-ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec-
Q 045682          120 GCCLETQIPILVFEY-INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN-  197 (309)
Q Consensus       120 g~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~-  197 (309)
                      +++...+..++|+|| +.+++|.+++.       ....+++..++.++.|++.||.|||   +.+++|+||||+||+++ 
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~-------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~  174 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYIT-------EKGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDL  174 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEET
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeC
Confidence            999999999999999 78899999987       3456999999999999999999999   89999999999999999 


Q ss_pred             CCCcEEEeecccccccCCCc--cccccccccccccccC-------CCcccHHHHHHHHhhcccccccccccccCCCCCCc
Q 045682          198 EENVAKLFDFSFSISIPEGE--LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSG  268 (309)
Q Consensus       198 ~~~~~kl~Dfg~a~~~~~~~--~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  268 (309)
                      .++.+||+|||++.......  ...|...|.+++....       .+.|+++..++.++.+................  .
T Consensus       175 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~  252 (312)
T 2iwi_A          175 RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELH--F  252 (312)
T ss_dssp             TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCC--C
T ss_pred             CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccC--C
Confidence            88999999999998765433  2334555555553222       24455555555555544332211111212111  1


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +...+.++.+|+.+||+.||++|||+.++++
T Consensus       253 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          253 PAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1245578999999999999999999999986

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.1e-34  Score=265.08  Aligned_cols=184  Identities=18%  Similarity=0.175  Sum_probs=148.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc------cCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM------IHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~g~~~~~~~~  128 (309)
                      ..+|...+.||+|+||.||+|.+  +++.||||++.... .....+.+|+.++..+      +|+||+++++++...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            35688899999999999999998  68999999997643 3446788899988887      577999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc--EEEee
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV--AKLFD  206 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~--~kl~D  206 (309)
                      ++||||+. ++|.+++...     ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.  +||+|
T Consensus       175 ~lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~D  245 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKN-----KFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVID  245 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHT-----TTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECC
T ss_pred             EEEEeccC-CCHHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEee
Confidence            99999997 5999998632     3345999999999999999999999   899999999999999999887  99999


Q ss_pred             cccccccCCCc-ccccccccccccccc------CCCcccHHHHHHHHhhcc
Q 045682          207 FSFSISIPEGE-LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEED  250 (309)
Q Consensus       207 fg~a~~~~~~~-~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  250 (309)
                      ||++....... ...|...|.+|+...      ..+.|+++..+++++.+.
T Consensus       246 FG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~  296 (429)
T 3kvw_A          246 FGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY  296 (429)
T ss_dssp             CTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCC
Confidence            99997654332 334555566655432      234566666666665543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.7e-35  Score=282.88  Aligned_cols=227  Identities=16%  Similarity=0.215  Sum_probs=182.2

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  129 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||||++...   .......+..|..++..+ +||||+++++++.+.+..+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            456799999999999999999999  7789999998653   223446788999999988 8999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+||||||||+||||+.++.+||+|||+
T Consensus       419 lV~E~~~gg~L~~~l~-------~~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGl  488 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQ-------QVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGM  488 (674)
T ss_dssp             EEEECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTT
T ss_pred             EEEeCcCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecce
Confidence            9999999999999997       3467999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCC----ccccccccccccccccC------CCcccHHHHHHHHhhccc------ccccccccccCCCCCCchHHHH
Q 045682          210 SISIPEG----ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       210 a~~~~~~----~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      ++.....    ....|...|.+|+....      .+.|+++..+++++.+..      ..+++..+..+....+  ...+
T Consensus       489 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s  566 (674)
T 3pfq_A          489 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP--KSMS  566 (674)
T ss_dssp             CEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCC--TTSC
T ss_pred             eeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC--ccCC
Confidence            9864322    24557777777765432      244556666666654432      2334444454443332  3567


Q ss_pred             HHHHHHHHHcccCCCCCCCCH
Q 045682          274 QAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~  294 (309)
                      .++.+|+..||+.||++||++
T Consensus       567 ~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          567 KEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             HHHHHHHHHHSCSSSTTCTTC
T ss_pred             HHHHHHHHHHccCCHHHCCCC
Confidence            889999999999999999998

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3.9e-35  Score=274.00  Aligned_cols=229  Identities=15%  Similarity=0.208  Sum_probs=180.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|...+.||+|+||.||+|.+  +++.||+|++....   ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            6688888999999999999998  78999999986532   233467889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++....   .....+++..+..++.||+.||.|||   +.+|+||||||+|||++.+|.+||+|||+++.
T Consensus       265 E~~~gg~L~~~l~~~~---~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~  338 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVD---EDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVE  338 (543)
T ss_dssp             CCCTTCBHHHHHHTSS---TTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EeccCCCHHHHHHHhh---cccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeee
Confidence            9999999999986221   12457999999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCc----cccccccccccccccC------CCcccHHHHHHHHhhccccc----------ccccccccCCCCCCchHHH
Q 045682          213 IPEGE----LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLN----------EIIDPLIMGDRSCSGKEQQ  272 (309)
Q Consensus       213 ~~~~~----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~  272 (309)
                      .....    ...|...|.+|+....      .+.|+++..+++++.+....          ++...+..+....  +...
T Consensus       339 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~--p~~~  416 (543)
T 3c4z_A          339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY--PDKF  416 (543)
T ss_dssp             CCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCC--CTTS
T ss_pred             ccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCC--Cccc
Confidence            65433    2357777777765433      24556666666665544321          1222222222221  2355


Q ss_pred             HHHHHHHHHHcccCCCCCCCCH
Q 045682          273 LQAYAHLIFECVNESPVDRPTM  294 (309)
Q Consensus       273 ~~~l~~li~~Cl~~~P~~RPt~  294 (309)
                      +.++.+|+..||+.||.+||++
T Consensus       417 s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          417 SPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCC
T ss_pred             CHHHHHHHHHhccCCHhHCCCC
Confidence            6889999999999999999976

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=7.6e-35  Score=259.67  Aligned_cols=229  Identities=12%  Similarity=0.109  Sum_probs=172.6

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc-----
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI-----  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-----  127 (309)
                      .++|...+.||+|+||.||+|.+  +++.||||.+....  ....+.+.+|+.+++.++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            46788899999999999999998  78999999987642  3345678999999999999999999999987654     


Q ss_pred             -eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          128 -PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       128 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                       .++||||+. ++|.+++.         ..+++..+..++.||+.||.|||   +.+|+||||||+||+++.++.+||+|
T Consensus       103 ~~~lv~e~~~-~~l~~~~~---------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~D  169 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG---------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILD  169 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT---------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECS
T ss_pred             eEEEEecccc-CCHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEee
Confidence             499999998 59988863         35999999999999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCc-ccccccccccccccc-------CCCcccHHHHHHHHhhcccccccc------ccc-------------
Q 045682          207 FSFSISIPEGE-LLTGLRAFDLARLNE-------DDGYVALRDHVKKYFEEDRLNEII------DPL-------------  259 (309)
Q Consensus       207 fg~a~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~-------------  259 (309)
                      ||++....... ...|...|.+|+...       ..+.|+++..++.++.+.....-.      ...             
T Consensus       170 fg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  249 (353)
T 3coi_A          170 FGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ  249 (353)
T ss_dssp             TTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred             cccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            99998654322 234445555554322       235666776777666543221100      000             


Q ss_pred             --------------cc---CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 --------------IM---GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 --------------~~---g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    ..   .... ......+.++.+|+.+||+.||++|||+.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          250 KLNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             TCSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                          00   0000 011244678999999999999999999999974

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1e-35  Score=260.85  Aligned_cols=243  Identities=13%  Similarity=0.178  Sum_probs=178.8

Q ss_pred             cccccHHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCC--chhHHHHHHHHHHHhhcc--CCcceeee
Q 045682           45 YCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASK--PRMYDCCINNIVYASQMI--HRCFFKLI  119 (309)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~  119 (309)
                      ...+.++.+....++|...+.||+|+||.||+|.+ +++.||+|.+....  ......+.+|+.++.+++  ||||++++
T Consensus        15 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~   94 (313)
T 3cek_A           15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY   94 (313)
T ss_dssp             -----CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred             CCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence            33455555566677899999999999999999999 78999999986543  345577999999999996  59999999


Q ss_pred             eeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          120 GCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       120 g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                      +++..++..++||| +.+++|.+++.       ....+++..+..++.|++.||.|||   +.+++||||||+|||++ +
T Consensus        95 ~~~~~~~~~~lv~e-~~~~~L~~~l~-------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~  162 (313)
T 3cek_A           95 DYEITDQYIYMVME-CGNIDLNSWLK-------KKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-D  162 (313)
T ss_dssp             EEEECSSEEEEEEC-CCSEEHHHHHH-------HCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-T
T ss_pred             EEeecCCEEEEEEe-cCCCcHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-C
Confidence            99999999999999 56779999987       4567899999999999999999999   89999999999999996 4


Q ss_pred             CcEEEeecccccccCCCc------cccccccccccccccC-----------------CCcccHHHHHHHHhhccccc-cc
Q 045682          200 NVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNED-----------------DGYVALRDHVKKYFEEDRLN-EI  255 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~-~~  255 (309)
                      +.+||+|||++.......      ...|...|.+|+....                 .+.|+++..++.++.+.... ..
T Consensus       163 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (313)
T 3cek_A          163 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  242 (313)
T ss_dssp             TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence            899999999998764332      2345666666654322                 24455555555555443221 11


Q ss_pred             ------ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          256 ------IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       256 ------~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                            +............+...+.++.+|+.+||+.||.+|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          243 INQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             CSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence                  11111111111111233578999999999999999999999975

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.3e-35  Score=264.98  Aligned_cols=234  Identities=16%  Similarity=0.190  Sum_probs=157.6

Q ss_pred             CCc-cCceeecCCeEEEEEEe----CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceEEEE
Q 045682           60 YDS-EKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPILVF  132 (309)
Q Consensus        60 ~~~-~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~  132 (309)
                      |.. +++||+|+||.||+|.+    ++..||+|.+....  ....+.+|+.+|..++||||+++++++..  +...++||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            544 56899999999999996    46889999987653  23568899999999999999999999954  66899999


Q ss_pred             EeccCCChhhhhhhhCC--CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee----cCCCcEEEee
Q 045682          133 EYINCGSLADRIRIQHN--PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF----NEENVAKLFD  206 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~--~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill----~~~~~~kl~D  206 (309)
                      ||+.+ +|.+++.....  .......+++..++.++.||+.||.|||   +.+|+||||||+|||+    +.++.+||+|
T Consensus       100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D  175 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD  175 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred             eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence            99975 88888753321  1112345999999999999999999999   8999999999999999    6788999999


Q ss_pred             cccccccCCC-------ccccccccccccccccCC-------CcccHHHHHHHHhhcccccccccc--------------
Q 045682          207 FSFSISIPEG-------ELLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNEIIDP--------------  258 (309)
Q Consensus       207 fg~a~~~~~~-------~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--------------  258 (309)
                      ||+++.....       ....|...|.+|+.....       +.|+++..++.++.+.........              
T Consensus       176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~  255 (405)
T 3rgf_A          176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD  255 (405)
T ss_dssp             TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred             CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence            9999866432       134456666666654332       344445555555544322110000              


Q ss_pred             -cc--cCCCC--------------------------CCchH--------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 -LI--MGDRS--------------------------CSGKE--------QQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 -~~--~g~~~--------------------------~~~~~--------~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       +.  .|..+                          .....        ..+..+.+|+..||+.||.+|||+.|+++
T Consensus       256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence             00  00000                          00000        01456889999999999999999999975

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.2e-35  Score=264.10  Aligned_cols=231  Identities=18%  Similarity=0.150  Sum_probs=166.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc------eEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI------PIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~------~~l  130 (309)
                      .+|...+.||+|+||.||+|.+ .+..||+|++......    ..+|+.+++.++||||+++++++...+.      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            4588899999999999999999 6677999988654322    2369999999999999999999975443      789


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec-CCCcEEEeeccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN-EENVAKLFDFSF  209 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~  209 (309)
                      ||||++++. .+.+....   .....+++..+..++.||+.||.|||   +.+|+||||||+|||++ .++.+||+|||+
T Consensus       116 v~e~~~~~l-~~~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~  188 (394)
T 4e7w_A          116 VLEYVPETV-YRASRHYA---KLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGS  188 (394)
T ss_dssp             EEECCSEEH-HHHHHHHH---HTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EeeccCccH-HHHHHHHH---hhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence            999998754 33332110   13567999999999999999999999   89999999999999999 799999999999


Q ss_pred             ccccCCCc---cccccccccccccccCC-------CcccHHHHHHHHhhcccccc----------ccc------------
Q 045682          210 SISIPEGE---LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNE----------IID------------  257 (309)
Q Consensus       210 a~~~~~~~---~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----------~~~------------  257 (309)
                      ++......   ...|...|.+|+...+.       +.|+++..++.++.+.....          ++.            
T Consensus       189 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~  268 (394)
T 4e7w_A          189 AKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT  268 (394)
T ss_dssp             CEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             cccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            98764332   33455556666543322       34555555555544432111          000            


Q ss_pred             --ccc-cCCCC---CCc-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          258 --PLI-MGDRS---CSG-----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       258 --~~~-~g~~~---~~~-----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                        +.. ....+   ...     +...++++.+|+.+||+.||.+|||+.++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence              000 00000   000     0124578999999999999999999999974

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2e-35  Score=260.07  Aligned_cols=238  Identities=18%  Similarity=0.206  Sum_probs=180.1

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch------hHHHHHHHHHHHhhcc--CCcceeee
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR------MYDCCINNIVYASQMI--HRCFFKLI  119 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~  119 (309)
                      ..+.....++|...+.||+|+||.||+|.+  +++.||||.+......      ....+.+|+.++..+.  ||||++++
T Consensus        35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~  114 (320)
T 3a99_A           35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL  114 (320)
T ss_dssp             -----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEE
T ss_pred             ccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEE
Confidence            334445567899999999999999999998  7899999998654211      2245678999999995  69999999


Q ss_pred             eeeeeCCceEEEEEeccC-CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec-
Q 045682          120 GCCLETQIPILVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN-  197 (309)
Q Consensus       120 g~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~-  197 (309)
                      +++..++..++|+|++.+ ++|.+++.       ....+++..++.++.|++.||.|||   +.+|+||||||+|||++ 
T Consensus       115 ~~~~~~~~~~lv~e~~~~~~~L~~~l~-------~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~  184 (320)
T 3a99_A          115 DWFERPDSFVLILERPEPVQDLFDFIT-------ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDL  184 (320)
T ss_dssp             EEEECSSEEEEEEECCSSEEEHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEET
T ss_pred             EEEecCCcEEEEEEcCCCCccHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeC
Confidence            999999999999999976 89999987       4467999999999999999999999   89999999999999999 


Q ss_pred             CCCcEEEeecccccccCCCc--cccccccccccccccC-------CCcccHHHHHHHHhhcccccccccccccCCCCCCc
Q 045682          198 EENVAKLFDFSFSISIPEGE--LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSG  268 (309)
Q Consensus       198 ~~~~~kl~Dfg~a~~~~~~~--~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  268 (309)
                      .++.+||+|||++.......  ...|...|.+|+....       .+.|+++..++.++.+.......+....+....  
T Consensus       185 ~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~--  262 (320)
T 3a99_A          185 NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--  262 (320)
T ss_dssp             TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCC--
T ss_pred             CCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccc--
Confidence            78999999999998765433  2345556666654322       244555555555555443322212222221111  


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +...+.++.+|+.+||+.||++|||+.+|++
T Consensus       263 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          263 RQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1234578999999999999999999999975

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=8.2e-35  Score=256.68  Aligned_cols=238  Identities=13%  Similarity=0.149  Sum_probs=169.1

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHH-HHhhccCCcceeeeeeeeeCCceEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIV-YASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||+|.+.... .....++..|+. +++.++||||+++++++..++..++|
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv   99 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC   99 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence            347788899999999999999999  68999999997653 233455666666 67777999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |||+++ +|.+++.....  .....+++..+..++.|++.||.|||   +. +++||||||+|||++.++.+||+|||++
T Consensus       100 ~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~  173 (327)
T 3aln_A          100 MELMST-SFDKFYKYVYS--VLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGIS  173 (327)
T ss_dssp             ECCCSE-EHHHHHHHHHH--TTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred             EeecCC-ChHHHHHHHHh--hhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCc
Confidence            999986 88888752110  12567999999999999999999999   77 9999999999999999999999999999


Q ss_pred             cccCCCc---cccccccccccccc----------cCCCcccHHHHHHHHhhccccc-------ccccccccCCCCCC---
Q 045682          211 ISIPEGE---LLTGLRAFDLARLN----------EDDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSCS---  267 (309)
Q Consensus       211 ~~~~~~~---~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~---  267 (309)
                      .......   ...|...|.+|+..          ...+.|+++..++.++.+....       +.+.....+..+..   
T Consensus       174 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  253 (327)
T 3aln_A          174 GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS  253 (327)
T ss_dssp             CC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCC
T ss_pred             eecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCc
Confidence            7764432   22455556666543          1235566666666666543221       22223333322211   


Q ss_pred             chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       268 ~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .....+..+.+|+..||+.||.+|||+.+|++
T Consensus       254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          254 EEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            11245678999999999999999999999975

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.4e-34  Score=261.34  Aligned_cols=233  Identities=14%  Similarity=0.185  Sum_probs=174.3

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc--------CCcceeeeeeee---
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI--------HRCFFKLIGCCL---  123 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~g~~~---  123 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+... ....+.+.+|+.++..++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            47799999999999999999998  7899999999754 244567899999999995        888999999987   


Q ss_pred             -eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeecCCC-
Q 045682          124 -ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFNEEN-  200 (309)
Q Consensus       124 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~~~~-  200 (309)
                       .....++||||+. ++|.+++...     ....+++..++.++.||+.||.|||   +. +|+||||||+|||++.++ 
T Consensus       115 ~~~~~~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~  185 (397)
T 1wak_A          115 VNGTHICMVFEVLG-HHLLKWIIKS-----NYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQ  185 (397)
T ss_dssp             TTEEEEEEEECCCC-CBHHHHHHHT-----TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHH
T ss_pred             CCCceEEEEEeccC-ccHHHHHHhc-----ccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccch
Confidence             4557899999994 5666666421     3357999999999999999999999   87 999999999999998775 


Q ss_pred             ------------------------------------------------cEEEeecccccccCCCc-cccccccccccccc
Q 045682          201 ------------------------------------------------VAKLFDFSFSISIPEGE-LLTGLRAFDLARLN  231 (309)
Q Consensus       201 ------------------------------------------------~~kl~Dfg~a~~~~~~~-~~~g~~~~~~~~~~  231 (309)
                                                                      .+||+|||++....... ...|...|.+|+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~  265 (397)
T 1wak_A          186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVL  265 (397)
T ss_dssp             HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHH
T ss_pred             hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhh
Confidence                                                            79999999998664332 23455556655533


Q ss_pred             c------CCCcccHHHHHHHHhhcccccccccc------------c--ccCCC---------------------------
Q 045682          232 E------DDGYVALRDHVKKYFEEDRLNEIIDP------------L--IMGDR---------------------------  264 (309)
Q Consensus       232 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~------------~--~~g~~---------------------------  264 (309)
                      .      ..+.|+++..++.++.+.....-.+.            .  ..|..                           
T Consensus       266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (397)
T 1wak_A          266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL  345 (397)
T ss_dssp             HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence            2      23456666666666554322110000            0  00000                           


Q ss_pred             -----------CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 -----------SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 -----------~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                 ....+...+..+.+|+.+||+.||++|||+.|+++
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                       00113466788999999999999999999999975

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.4e-34  Score=276.22  Aligned_cols=235  Identities=17%  Similarity=0.244  Sum_probs=179.5

Q ss_pred             hcCCCccCceeecCCeEEEEEEe---CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc-----
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC---QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI-----  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-----  127 (309)
                      .++|...+.||+|+||.||+|.+   +++.||||.+.... ......+.+|+.++.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            47799999999999999999998   57999999986543 3445678999999999999999999999987665     


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+++++|.+++.         ..+++..++.++.||+.||.|||   +.+|+||||||+|||++.+ .+||+||
T Consensus       159 ~~lv~E~~~g~~L~~~~~---------~~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DF  225 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKG---------QKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDL  225 (681)
T ss_dssp             EEEEEECCCCEECC-------------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCC
T ss_pred             eEEEEEeCCCCcHHHHHh---------CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEec
Confidence            699999999999999864         27999999999999999999999   8999999999999999875 8999999


Q ss_pred             ccccccCCCccccccccccccccccC-----CCcccHHHHHHHHhhcccccccccccccCCCCCCchHHHHHHHHHHHHH
Q 045682          208 SFSISIPEGELLTGLRAFDLARLNED-----DGYVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFE  282 (309)
Q Consensus       208 g~a~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~  282 (309)
                      |+++.........|...|.+|+....     .+.|+++..++.++.+.....-  ....+..........+..+.+|+.+
T Consensus       226 G~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~  303 (681)
T 2pzi_A          226 GAVSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNG--RYVDGLPEDDPVLKTYDSYGRLLRR  303 (681)
T ss_dssp             TTCEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETT--EECSSCCTTCHHHHHCHHHHHHHHH
T ss_pred             ccchhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcc--cccccccccccccccCHHHHHHHhh
Confidence            99998877666677777777764322     2445555555555443322110  0011111112223455789999999


Q ss_pred             cccCCCCCCCC-HHHHHHHHHHHHH
Q 045682          283 CVNESPVDRPT-MVDVAKKLKQMYR  306 (309)
Q Consensus       283 Cl~~~P~~RPt-~~~l~~~L~~l~~  306 (309)
                      ||+.||.+||+ +.++.+.|..+..
T Consensus       304 ~l~~dP~~R~~~~~~l~~~l~~~~~  328 (681)
T 2pzi_A          304 AIDPDPRQRFTTAEEMSAQLTGVLR  328 (681)
T ss_dssp             HTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred             hccCChhhCCCHHHHHHHHHHHHHH
Confidence            99999999995 5666677776643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=7.3e-35  Score=258.06  Aligned_cols=224  Identities=12%  Similarity=0.180  Sum_probs=168.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCC--------chhHHHHHHHHHHHhhcc---------C-------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK--------PRMYDCCINNIVYASQMI---------H-------  112 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h-------  112 (309)
                      .++|...+.||+|+||+||+|+++++.||||++....        ....+.+.+|+.+++.++         |       
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            3568888999999999999999999999999987642        233477899999999986         5       


Q ss_pred             ----------Ccceeeeeeeee-------------CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHH
Q 045682          113 ----------RCFFKLIGCCLE-------------TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI  169 (309)
Q Consensus       113 ----------~niv~l~g~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i  169 (309)
                                |||+++++++.+             .+..++||||+++|++.+.+.        ...+++..+..++.||
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~--------~~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR--------TKLSSLATAKSILHQL  170 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT--------TTCCCHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH--------hcCCCHHHHHHHHHHH
Confidence                      445555554443             678999999999997777663        3568999999999999


Q ss_pred             HHHHHHhhcCCCCCeEeCCCCCCCeeecCCC--------------------cEEEeecccccccCCCccccccccccccc
Q 045682          170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEEN--------------------VAKLFDFSFSISIPEGELLTGLRAFDLAR  229 (309)
Q Consensus       170 a~~l~yLH~~~~~~iiH~dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~g~~~~~~~~  229 (309)
                      +.||.|||+  +.+|+||||||+|||++.++                    .+||+|||+|+..... ...|...|.+|+
T Consensus       171 ~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE  247 (336)
T 2vuw_A          171 TASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDED  247 (336)
T ss_dssp             HHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSG
T ss_pred             HHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChh
Confidence            999999993  47999999999999999887                    8999999999876543 446777788887


Q ss_pred             cccCCCcccHHHHHHHHhhc---------ccccc------cccccc----cC-CCCCCchHHHHHHHHHHHHHcccCCCC
Q 045682          230 LNEDDGYVALRDHVKKYFEE---------DRLNE------IIDPLI----MG-DRSCSGKEQQLQAYAHLIFECVNESPV  289 (309)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~---------~~~~~------~~~~~~----~g-~~~~~~~~~~~~~l~~li~~Cl~~~P~  289 (309)
                      ...+..  ....++|.+...         .++..      ..+...    .. ..........++++.+|+.+||+.|  
T Consensus       248 ~~~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d--  323 (336)
T 2vuw_A          248 LFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS--  323 (336)
T ss_dssp             GGCCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS--
T ss_pred             hhcCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC--
Confidence            765433  667777775222         11111      111111    11 1111223467889999999999976  


Q ss_pred             CCCCHHHHH
Q 045682          290 DRPTMVDVA  298 (309)
Q Consensus       290 ~RPt~~~l~  298 (309)
                         |+.|++
T Consensus       324 ---sa~e~l  329 (336)
T 2vuw_A          324 ---SATDLL  329 (336)
T ss_dssp             ---SHHHHH
T ss_pred             ---CHHHHH
Confidence               888887

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.6e-34  Score=263.49  Aligned_cols=231  Identities=17%  Similarity=0.160  Sum_probs=167.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------ceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------IPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------~~~  129 (309)
                      ..|...+.||+|+||.||+|.+  +++.||||++.....    .+.+|+.+++.++||||+++++++...+      ..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            3588889999999999999999  689999999865432    2347999999999999999999986422      267


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-CcEEEeecc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-NVAKLFDFS  208 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg  208 (309)
                      +||||+++ +|.+.+....   .....+++..+..++.||+.||.|||   +.+|+||||||+|||++.+ +.+||+|||
T Consensus       130 lv~e~~~~-~l~~~~~~~~---~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG  202 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYS---RAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFG  202 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHH---HTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             eehhcccc-cHHHHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccch
Confidence            89999986 6666654211   13567999999999999999999999   9999999999999999965 678999999


Q ss_pred             cccccCCCc---cccccccccccccccCC-------CcccHHHHHHHHhhcccccc----------cccc----------
Q 045682          209 FSISIPEGE---LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNE----------IIDP----------  258 (309)
Q Consensus       209 ~a~~~~~~~---~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----------~~~~----------  258 (309)
                      +++......   ...|...|.+++.....       +.|+++..+++++.+.....          ++..          
T Consensus       203 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~  282 (420)
T 1j1b_A          203 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR  282 (420)
T ss_dssp             TCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred             hhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            998764332   23455556666543322       45556666666654432211          1100          


Q ss_pred             ----cccC-CCCC---C-----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 ----LIMG-DRSC---S-----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ----~~~g-~~~~---~-----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                          .... ..+.   .     .+...+.++.+|+.+||+.||.+|||+.|+++
T Consensus       283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence                0000 0000   0     01123578999999999999999999999974

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=5.8e-34  Score=251.80  Aligned_cols=233  Identities=18%  Similarity=0.212  Sum_probs=176.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe---CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCc------ceeeeeeeeeCCc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC---QERLISVMKFDASKPRMYDCCINNIVYASQMIHRC------FFKLIGCCLETQI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~g~~~~~~~  127 (309)
                      .++|...+.||+|+||.||+|.+   +++.||+|.+.... ...+.+.+|+.++..++|++      ++++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            36788999999999999999987   67999999987543 44567889999999997765      9999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---------
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---------  198 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---------  198 (309)
                      .++||||+ +++|.+++...     ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.         
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKEN-----GFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHT-----TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             EEEEEcCC-CCCHHHHHHhc-----CCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCC
Confidence            99999999 78999998622     2346899999999999999999999   899999999999999987         


Q ss_pred             ----------CCcEEEeecccccccCCC-ccccccccccccccccC------CCcccHHHHHHHHhhcccccccccc---
Q 045682          199 ----------ENVAKLFDFSFSISIPEG-ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIIDP---  258 (309)
Q Consensus       199 ----------~~~~kl~Dfg~a~~~~~~-~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---  258 (309)
                                ++.+||+|||++...... ....|...|.+|+....      .+.|+++..++.++.+.......+.   
T Consensus       163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  242 (339)
T 1z57_A          163 KIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH  242 (339)
T ss_dssp             ---CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred             ccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                      678999999999875443 23455666666654322      3455555566655544321110000   


Q ss_pred             ---c--ccCCCC----------------------------------------CCchHHHHHHHHHHHHHcccCCCCCCCC
Q 045682          259 ---L--IMGDRS----------------------------------------CSGKEQQLQAYAHLIFECVNESPVDRPT  293 (309)
Q Consensus       259 ---~--~~g~~~----------------------------------------~~~~~~~~~~l~~li~~Cl~~~P~~RPt  293 (309)
                         .  ..+..+                                        ...+...+.++.+|+.+||+.||.+|||
T Consensus       243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  322 (339)
T 1z57_A          243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT  322 (339)
T ss_dssp             HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence               0  000000                                        0011245678999999999999999999


Q ss_pred             HHHHHH
Q 045682          294 MVDVAK  299 (309)
Q Consensus       294 ~~~l~~  299 (309)
                      +.|+++
T Consensus       323 ~~ell~  328 (339)
T 1z57_A          323 LREALK  328 (339)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=9.1e-34  Score=251.14  Aligned_cols=230  Identities=15%  Similarity=0.149  Sum_probs=156.7

Q ss_pred             hcCCCcc-CceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHH-HHHhhccCCcceeeeeeeee----CCce
Q 045682           57 TNNYDSE-KVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNI-VYASQMIHRCFFKLIGCCLE----TQIP  128 (309)
Q Consensus        57 ~~~~~~~-~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~l~g~~~~----~~~~  128 (309)
                      .++|... ++||+|+||.||+|.+  +++.||+|++....     ...+|+ ..+..+.||||+++++++..    +...
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            4678874 4699999999999999  68999999986542     222333 34556699999999999876    4458


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEEe
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKLF  205 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl~  205 (309)
                      ++||||+++|+|.+++...     ....+++..++.++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+
T Consensus       102 ~lv~e~~~gg~L~~~l~~~-----~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~  173 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQER-----GDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLT  173 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC------CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred             EEEEeccCCCCHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEe
Confidence            9999999999999998621     2357999999999999999999999   899999999999999976   4569999


Q ss_pred             ecccccccCCCc--cccccccccccccccC------CCcccHHHHHHHHhhccccccc----------ccccccCCC--C
Q 045682          206 DFSFSISIPEGE--LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEI----------IDPLIMGDR--S  265 (309)
Q Consensus       206 Dfg~a~~~~~~~--~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~g~~--~  265 (309)
                      |||++.......  ...|...|.+|+....      .+.|+++..++.++.+.....-          ......+..  +
T Consensus       174 Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  253 (336)
T 3fhr_A          174 DFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP  253 (336)
T ss_dssp             CCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCC
T ss_pred             ccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccC
Confidence            999998664432  2334445555554321      2445555555555544322110          111111111  1


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .......+.++.+|+.+||+.||.+|||+.++++
T Consensus       254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          254 NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1111345688999999999999999999999986

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=5.8e-34  Score=255.46  Aligned_cols=233  Identities=15%  Similarity=0.154  Sum_probs=175.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-----------CCcceeeeeeee
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-----------HRCFFKLIGCCL  123 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~g~~~  123 (309)
                      .++|...+.||+|+||.||+|.+  +++.||+|.+.... .....+.+|+.++.++.           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            36789999999999999999998  78999999987542 34567889999999886           899999999998


Q ss_pred             eCC----ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeec-
Q 045682          124 ETQ----IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFN-  197 (309)
Q Consensus       124 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~-  197 (309)
                      ..+    ..++||||+ +++|.+++...     ....+++..+..++.||+.||.|||   +. +|+||||||+|||++ 
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~  167 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKY-----EHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEI  167 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHT-----TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEE
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHh-----hccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEec
Confidence            654    689999999 78999998632     3456999999999999999999999   87 999999999999994 


Q ss_pred             -----CCCcEEEeecccccccCCCc-ccccccccccccccc------CCCcccHHHHHHHHhhccccccccc--------
Q 045682          198 -----EENVAKLFDFSFSISIPEGE-LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNEIID--------  257 (309)
Q Consensus       198 -----~~~~~kl~Dfg~a~~~~~~~-~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--------  257 (309)
                           ..+.+||+|||++....... ...|...|.+|+...      ..+.|+++..++.++.+.....-.+        
T Consensus       168 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  247 (373)
T 1q8y_A          168 VDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD  247 (373)
T ss_dssp             EETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred             cCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence                 44589999999998664432 234555555555322      2355666666666655432211000        


Q ss_pred             ----cc--ccCCC--------------------------------------CCCchHHHHHHHHHHHHHcccCCCCCCCC
Q 045682          258 ----PL--IMGDR--------------------------------------SCSGKEQQLQAYAHLIFECVNESPVDRPT  293 (309)
Q Consensus       258 ----~~--~~g~~--------------------------------------~~~~~~~~~~~l~~li~~Cl~~~P~~RPt  293 (309)
                          ..  ..|..                                      ....+...+.++.+|+.+||+.||.+|||
T Consensus       248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  327 (373)
T 1q8y_A          248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD  327 (373)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred             HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence                00  00000                                      01122467788999999999999999999


Q ss_pred             HHHHHH
Q 045682          294 MVDVAK  299 (309)
Q Consensus       294 ~~~l~~  299 (309)
                      +.++++
T Consensus       328 ~~ell~  333 (373)
T 1q8y_A          328 AGGLVN  333 (373)
T ss_dssp             HHHHHT
T ss_pred             HHHHhh
Confidence            999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=5.2e-34  Score=261.16  Aligned_cols=233  Identities=18%  Similarity=0.215  Sum_probs=164.9

Q ss_pred             CCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           60 YDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      |...+.||+|+||+||.+.. +++.||||++...   ..+.+.+|+.++.++ +||||+++++++.+++..++||||++ 
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            44567899999999975544 8999999998653   235678999999987 89999999999999999999999996 


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC-------------CcEEE
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE-------------NVAKL  204 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~-------------~~~kl  204 (309)
                      |+|.+++.............++..++.++.||+.||.|||   +.+|+||||||+|||++.+             +.+||
T Consensus        93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL  169 (434)
T 2rio_A           93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI  169 (434)
T ss_dssp             EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred             CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence            5999998632111001111233456789999999999999   8999999999999999754             48999


Q ss_pred             eecccccccCCCc--------cccccccccccccccC-------------CCcccHHHHHHHHhh-cccc-cccc---cc
Q 045682          205 FDFSFSISIPEGE--------LLTGLRAFDLARLNED-------------DGYVALRDHVKKYFE-EDRL-NEII---DP  258 (309)
Q Consensus       205 ~Dfg~a~~~~~~~--------~~~g~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~-~~~~-~~~~---~~  258 (309)
                      +|||+++......        ...|...+.+|+....             .+.|+++..++.++. +... ....   ..
T Consensus       170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~  249 (434)
T 2rio_A          170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN  249 (434)
T ss_dssp             CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH
T ss_pred             cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH
Confidence            9999998765432        2346666666664322             355666666666664 3221 1110   01


Q ss_pred             cccCC-----CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 LIMGD-----RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ~~~g~-----~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ...+.     .........+.++.+|+.+||+.||.+|||+.+|++
T Consensus       250 i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          250 IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            11111     112223467789999999999999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=6.1e-34  Score=250.78  Aligned_cols=235  Identities=15%  Similarity=0.197  Sum_probs=172.5

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe---CCeEEEEEEecCCC--chhHHHHHHHHHHHhhc---cCCcceeeeeeee----
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC---QERLISVMKFDASK--PRMYDCCINNIVYASQM---IHRCFFKLIGCCL----  123 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~----  123 (309)
                      ..++|...+.||+|+||.||+|.+   +++.||+|.+....  ......+.+|+.++..+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457799999999999999999997   47899999986532  12223566788777776   8999999999987    


Q ss_pred             -eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          124 -ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       124 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                       .....++||||++ |+|.+++...     ....+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~  159 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKV-----PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQI  159 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHS-----CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCE
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhc-----ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCE
Confidence             4567899999998 5999998632     3345999999999999999999999   8999999999999999999999


Q ss_pred             EEeecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccccc------cccccc-------
Q 045682          203 KLFDFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE------IIDPLI-------  260 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-------  260 (309)
                      ||+|||++.......   ...|...|.+|+...      ..+.|+++..++.++.+.....      .+..+.       
T Consensus       160 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  239 (326)
T 1blx_A          160 KLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG  239 (326)
T ss_dssp             EECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             EEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            999999998765332   233455555555322      2345666666666654432211      000000       


Q ss_pred             --------------cCCCCC----CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          261 --------------MGDRSC----SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       261 --------------~g~~~~----~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    ......    ......+..+.+|+.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                          000000    001134577899999999999999999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=4.1e-33  Score=251.18  Aligned_cols=188  Identities=19%  Similarity=0.211  Sum_probs=147.4

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CC-----cceeeeeeeeeC
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-HR-----CFFKLIGCCLET  125 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~g~~~~~  125 (309)
                      ....++|...+.||+|+||+||+|.+  +++.||||++.... .....+..|+.++..++ |+     +|+++++++...
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            33467899999999999999999998  78999999997542 34567788999998884 55     499999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec--CCCcEE
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENVAK  203 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~--~~~~~k  203 (309)
                      +..++||||+++ +|.+++...     ....+++..+..++.|++.||.|||.. ..+|+||||||+|||++  .++.+|
T Consensus       129 ~~~~lv~e~~~~-~L~~~l~~~-----~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~k  201 (382)
T 2vx3_A          129 NHLCLVFEMLSY-NLYDLLRNT-----NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK  201 (382)
T ss_dssp             TEEEEEEECCCC-BHHHHHHHT-----TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEE
T ss_pred             CceEEEEecCCC-CHHHHHhhc-----CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEE
Confidence            999999999975 999998632     235699999999999999999999942 46899999999999994  578899


Q ss_pred             EeecccccccCCC-ccccccccccccccccC------CCcccHHHHHHHHhhc
Q 045682          204 LFDFSFSISIPEG-ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEE  249 (309)
Q Consensus       204 l~Dfg~a~~~~~~-~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  249 (309)
                      |+|||+++..... ....|...|.+|+....      .+.|+++..++.++.+
T Consensus       202 L~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  254 (382)
T 2vx3_A          202 IVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG  254 (382)
T ss_dssp             ECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             EEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhC
Confidence            9999999876443 23445555666654332      3445556566655544

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=3.5e-33  Score=248.47  Aligned_cols=233  Identities=13%  Similarity=0.147  Sum_probs=174.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CC-eEEEEEEecCCCchhHHHHHHHHHHHhhccCCc------ceeeeeeeeeCCc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QE-RLISVMKFDASKPRMYDCCINNIVYASQMIHRC------FFKLIGCCLETQI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~g~~~~~~~  127 (309)
                      .++|...+.||+|+||.||+|..  ++ ..||+|.+.... .....+.+|+.++..+.|++      ++.+++++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            46799999999999999999998  44 789999987542 44567889999999998777      8999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee-----------
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF-----------  196 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill-----------  196 (309)
                      .++||||+ +++|.+++...     ....+++..+..++.||+.||.|||   +.+|+||||||+|||+           
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~-----~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~  167 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKEN-----NFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNE  167 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHT-----TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECC
T ss_pred             EEEEEecc-CCChHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccc
Confidence            99999999 56777777522     3357999999999999999999999   9999999999999999           


Q ss_pred             --------cCCCcEEEeecccccccCCC-ccccccccccccccccC------CCcccHHHHHHHHhhccccccccc----
Q 045682          197 --------NEENVAKLFDFSFSISIPEG-ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEIID----  257 (309)
Q Consensus       197 --------~~~~~~kl~Dfg~a~~~~~~-~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----  257 (309)
                              +.++.+||+|||++...... ....|...|.+|+....      .+.|+++..++.++.+.....-.+    
T Consensus       168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          168 HKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             C-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                    56789999999999865433 23456666666654322      345556666666554432211000    


Q ss_pred             --c--cccCCCC----------------------------------------CCchHHHHHHHHHHHHHcccCCCCCCCC
Q 045682          258 --P--LIMGDRS----------------------------------------CSGKEQQLQAYAHLIFECVNESPVDRPT  293 (309)
Q Consensus       258 --~--~~~g~~~----------------------------------------~~~~~~~~~~l~~li~~Cl~~~P~~RPt  293 (309)
                        .  ...+..+                                        .......+.++.+|+.+||+.||++|||
T Consensus       248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  327 (355)
T 2eu9_A          248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT  327 (355)
T ss_dssp             HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence              0  0000000                                        0011234568999999999999999999


Q ss_pred             HHHHHH
Q 045682          294 MVDVAK  299 (309)
Q Consensus       294 ~~~l~~  299 (309)
                      +.++++
T Consensus       328 ~~e~l~  333 (355)
T 2eu9_A          328 LAEALL  333 (355)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999974

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=253.93  Aligned_cols=234  Identities=16%  Similarity=0.172  Sum_probs=162.5

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-hhH-HHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-RMY-DCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~-~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ..++|...+.||+|+||.||+|.+  +++.||+|.+..... ... +.+.++..++..++||||+++++++..++..++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            346788889999999999999999  689999999976532 222 3344555677888999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      |||+ ++.+..+...      ....+++..+..++.|++.||.|||   +. +++|+||||+||+++.++.+||+|||++
T Consensus       103 ~e~~-~~~~~~l~~~------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  172 (318)
T 2dyl_A          103 MELM-GTCAEKLKKR------MQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGIS  172 (318)
T ss_dssp             ECCC-SEEHHHHHHH------HTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             Eecc-CCcHHHHHHH------hccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence            9999 4455555431      2467899999999999999999999   75 9999999999999999999999999999


Q ss_pred             cccCCCc---ccccccccccccccc-----------CCCcccHHHHHHHHhhccccc-------ccccccccCCCCCC-c
Q 045682          211 ISIPEGE---LLTGLRAFDLARLNE-----------DDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSCS-G  268 (309)
Q Consensus       211 ~~~~~~~---~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~-~  268 (309)
                      .......   ...|...+.+|+...           ..+.|+++..++.++.+....       +.+.....+..+.. .
T Consensus       173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  252 (318)
T 2dyl_A          173 GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG  252 (318)
T ss_dssp             --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCS
T ss_pred             hhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCc
Confidence            7654332   234555555555432           235566666666665543211       12222222222211 1


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 ~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ....+.++.+|+.+||+.||.+|||+.+|++
T Consensus       253 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            1234578999999999999999999999975

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=8.8e-34  Score=259.25  Aligned_cols=230  Identities=14%  Similarity=0.160  Sum_probs=166.9

Q ss_pred             hcCCCccCceeecCCeEE-EEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTL-YKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V-~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ..+|...+.||+|+||+| +++..+++.||||++......   .+.+|+.+|.++ +||||+++++++.+....++||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            355888899999999985 555559999999998765322   356899999999 899999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-----CCcEEEeeccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-----ENVAKLFDFSF  209 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-----~~~~kl~Dfg~  209 (309)
                      ++ |+|.+++..      ......+..++.++.||+.||.|||   +.+|+||||||+|||++.     ...+||+|||+
T Consensus       100 ~~-g~L~~~l~~------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~  169 (432)
T 3p23_A          100 CA-ATLQEYVEQ------KDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL  169 (432)
T ss_dssp             CS-EEHHHHHHS------SSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred             CC-CCHHHHHHh------cCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence            97 599999862      2233455566789999999999999   899999999999999953     23588999999


Q ss_pred             ccccCCCc-------cccccccccccccccC---------CCcccHHHHHHHHhh-ccccc-c----cccccccC-CC-C
Q 045682          210 SISIPEGE-------LLTGLRAFDLARLNED---------DGYVALRDHVKKYFE-EDRLN-E----IIDPLIMG-DR-S  265 (309)
Q Consensus       210 a~~~~~~~-------~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~~~~-~----~~~~~~~g-~~-~  265 (309)
                      ++......       ...|...|.+|+....         .+.|+++..++.++. +.... .    ........ .. .
T Consensus       170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~  249 (432)
T 3p23_A          170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDC  249 (432)
T ss_dssp             EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTT
T ss_pred             eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccc
Confidence            98765331       2446667777765431         245566666666654 22111 1    00111100 11 1


Q ss_pred             CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       266 ~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .......+..+.+|+.+||+.||.+|||+.+|++
T Consensus       250 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          250 LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            1122355677899999999999999999999983

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=2.9e-33  Score=265.05  Aligned_cols=241  Identities=15%  Similarity=0.159  Sum_probs=178.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeee------CCce
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE------TQIP  128 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~------~~~~  128 (309)
                      ++|...+.||+|+||.||+|.+  +++.||||.+... .......+.+|+.++..++||||+++++++..      ++..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6799999999999999999998  7899999998765 34455779999999999999999999998765      6778


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc---EEEe
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV---AKLF  205 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~---~kl~  205 (309)
                      ++||||+++|+|.+++...    .....+++..++.++.|++.||.|||   +.+|+||||||+||+++.++.   +||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~----~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~  166 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQF----ENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKII  166 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSS----SCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhc----ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEc
Confidence            9999999999999998622    12346899999999999999999999   899999999999999987665   9999


Q ss_pred             ecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcccccc--------------------cc
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDRLNE--------------------II  256 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------------------~~  256 (309)
                      |||++.......   ...|...|.+|+...      ..+.|+++..++.++.+.....                    ..
T Consensus       167 DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~  246 (676)
T 3qa8_A          167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV  246 (676)
T ss_dssp             SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred             ccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence            999998765543   234555555555432      2345666666666665432210                    11


Q ss_pred             cccccCCC--------CCCchHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHHHH
Q 045682          257 DPLIMGDR--------SCSGKEQQLQAYAHLIFECVNESPVDRPTMVD-----VAKKLKQMY  305 (309)
Q Consensus       257 ~~~~~g~~--------~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~-----l~~~L~~l~  305 (309)
                      .....+..        +.......+..+.+|+..||+.||++|||+.+     ..+.++.+.
T Consensus       247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence            11112211        11122356789999999999999999999988     445555544

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.98  E-value=2.9e-33  Score=254.62  Aligned_cols=231  Identities=10%  Similarity=0.039  Sum_probs=161.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc---hhHHHHHHHHHHHhhccC-Ccceeee------------
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP---RMYDCCINNIVYASQMIH-RCFFKLI------------  119 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~l~------------  119 (309)
                      ..|...+.||+|+||.||+|.+  +++.||||++.....   ...+.+.+|+.++..+.| +|.....            
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            3466778899999999999998  699999999874432   235779999999999976 3221111            


Q ss_pred             ---------eeeee-----CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 045682          120 ---------GCCLE-----TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVI  185 (309)
Q Consensus       120 ---------g~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ii  185 (309)
                               .++..     ....+++|+++ +++|.+++............+++..++.++.||+.||+|||   +.+|+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii  233 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV  233 (413)
T ss_dssp             ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred             ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence                     11111     12356667765 57999998533211124567889999999999999999999   99999


Q ss_pred             eCCCCCCCeeecCCCcEEEeecccccccCCC-cccccccccccccccc----------------CCCcccHHHHHHHHhh
Q 045682          186 FRDFKLSNILFNEENVAKLFDFSFSISIPEG-ELLTGLRAFDLARLNE----------------DDGYVALRDHVKKYFE  248 (309)
Q Consensus       186 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~g~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~  248 (309)
                      ||||||+|||++.++.+||+|||+++..... ....| ..|.+|+...                ..+.|+++..++.++.
T Consensus       234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt  312 (413)
T 3dzo_A          234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC  312 (413)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred             cCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence            9999999999999999999999998765443 23345 5566665431                2345566666666654


Q ss_pred             cccc------cccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          249 EDRL------NEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       249 ~~~~------~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +...      .+.......+..      ..+.++.+|+.+||+.||++|||+.++++
T Consensus       313 g~~Pf~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          313 ADLPNTDDAALGGSEWIFRSCK------NIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             SSCCCCTTGGGSCSGGGGSSCC------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCcchhhhHHHHHhhcc------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            4322      222233322221      23477999999999999999999887753

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=7.7e-28  Score=226.65  Aligned_cols=138  Identities=17%  Similarity=0.081  Sum_probs=111.7

Q ss_pred             eeecCCeEEEEEEe--CCeEEEEEEecCCC----------chhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEE
Q 045682           66 IMKRSFYTLYKGFC--QERLISVMKFDASK----------PRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        66 lg~G~~g~V~~~~~--~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .+.|++|.+..++.  .|+.+++|.+....          ....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            45666666666554  78899999986542          12335699999999999 8999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||++|++|.++|.       ..++++..   +|+.||+.||+|||   +++||||||||+|||++.+|.+||+|||+|+.
T Consensus       322 Eyv~G~~L~d~i~-------~~~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~  388 (569)
T 4azs_A          322 EKLPGRLLSDMLA-------AGEEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVT  388 (569)
T ss_dssp             ECCCSEEHHHHHH-------TTCCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEES
T ss_pred             ecCCCCcHHHHHH-------hCCCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCee
Confidence            9999999999997       55667664   58899999999999   99999999999999999999999999999987


Q ss_pred             cCCC
Q 045682          213 IPEG  216 (309)
Q Consensus       213 ~~~~  216 (309)
                      ....
T Consensus       389 ~~~~  392 (569)
T 4azs_A          389 TPQD  392 (569)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            6543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.93  E-value=5e-26  Score=213.11  Aligned_cols=136  Identities=18%  Similarity=0.131  Sum_probs=110.7

Q ss_pred             CccCceeecCCeEEEEEEeCCeEEEEEEecCCCch--------hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           61 DSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPR--------MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ...+.||+|+||.||+|.+.+..+++|+.......        ..+.+.+|+.++++++||||+++..++...+..++||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            44678999999999999888999999986553211        1345899999999999999997777777888889999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++++|.+++.       .        +..++.|++.||.|||   +.+|+||||||+|||++.  .+||+|||+++.
T Consensus       419 E~~~ggsL~~~l~-------~--------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~  478 (540)
T 3en9_A          419 SYINGKLAKDVIE-------D--------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKI  478 (540)
T ss_dssp             ECCCSEEHHHHST-------T--------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred             ECCCCCCHHHHHH-------H--------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEE
Confidence            9999999999985       2        4689999999999999   899999999999999998  999999999988


Q ss_pred             cCCC
Q 045682          213 IPEG  216 (309)
Q Consensus       213 ~~~~  216 (309)
                      ....
T Consensus       479 ~~~~  482 (540)
T 3en9_A          479 SNLD  482 (540)
T ss_dssp             CCCH
T ss_pred             CCCc
Confidence            7553

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.93  E-value=1.9e-25  Score=192.74  Aligned_cols=138  Identities=12%  Similarity=0.104  Sum_probs=112.8

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCc------------------hhHHHHHHHHHHHhhccCCc
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKP------------------RMYDCCINNIVYASQMIHRC  114 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~n  114 (309)
                      ......|...+.||+|+||.||+|.+ +++.||+|.+.....                  .....+.+|+.++..++  |
T Consensus        86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~  163 (282)
T 1zar_A           86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G  163 (282)
T ss_dssp             HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T
T ss_pred             HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C
Confidence            33445566779999999999999999 789999999865321                  13456899999999998  5


Q ss_pred             ceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       115 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                       +++.+++.. +..++||||+++|+|.+ +.       .      .....++.|++.||.|||   +.+|+||||||+||
T Consensus       164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~-------~------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NI  224 (282)
T 1zar_A          164 -LAVPKVYAW-EGNAVLMELIDAKELYR-VR-------V------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNV  224 (282)
T ss_dssp             -SSSCCEEEE-ETTEEEEECCCCEEGGG-CC-------C------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSE
T ss_pred             -CCcCeEEec-cceEEEEEecCCCcHHH-cc-------h------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHE
Confidence             667775544 56799999999999998 43       1      123479999999999999   99999999999999


Q ss_pred             eecCCCcEEEeeccccccc
Q 045682          195 LFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~  213 (309)
                      |++ ++.+||+|||+|+..
T Consensus       225 Ll~-~~~vkl~DFG~a~~~  242 (282)
T 1zar_A          225 LVS-EEGIWIIDFPQSVEV  242 (282)
T ss_dssp             EEE-TTEEEECCCTTCEET
T ss_pred             EEE-CCcEEEEECCCCeEC
Confidence            999 999999999999754

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.88  E-value=1.3e-22  Score=172.88  Aligned_cols=136  Identities=12%  Similarity=0.117  Sum_probs=105.9

Q ss_pred             CCccCceeecCCeEEEEEEe--CCeE--EEEEEecCCCch------------------------hHHHHHHHHHHHhhcc
Q 045682           60 YDSEKVIMKRSFYTLYKGFC--QERL--ISVMKFDASKPR------------------------MYDCCINNIVYASQMI  111 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~--~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~  111 (309)
                      |...+.||+|+||.||+|.+  +|+.  ||||.+......                        ....+.+|+.++..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778899999999999998  8888  999987543211                        1135789999999998


Q ss_pred             CCcc--eeeeeeeeeCCceEEEEEeccC-C----ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 045682          112 HRCF--FKLIGCCLETQIPILVFEYINC-G----SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPV  184 (309)
Q Consensus       112 h~ni--v~l~g~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i  184 (309)
                      |+++  +.++++    +..+|||||+.+ |    +|.++..          ..++..+..++.|++.||.|||.  ..+|
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~----------~~~~~~~~~i~~qi~~~l~~lH~--~~gi  192 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR----------ELKELDVEGIFNDVVENVKRLYQ--EAEL  192 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG----------GGGGSCHHHHHHHHHHHHHHHHH--TSCE
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh----------ccChHHHHHHHHHHHHHHHHHHH--HCCE
Confidence            8864  344432    357899999952 4    6666532          12345668899999999999995  5799


Q ss_pred             EeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          185 IFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       185 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      +||||||+|||++.  .++|+|||+|...
T Consensus       193 vHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          193 VHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            99999999999998  9999999999654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.81  E-value=2.4e-20  Score=165.60  Aligned_cols=139  Identities=14%  Similarity=0.072  Sum_probs=99.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCc--------------hhHHHHHHHHHHHhhccCCcceeeeeee
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKP--------------RMYDCCINNIVYASQMIHRCFFKLIGCC  122 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l~g~~  122 (309)
                      .-|..+..||+|+||.||+|.. +|+.||||.++....              ........+++++....|+|+++++...
T Consensus        95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3488899999999999999998 899999998754210              1112233333333334445544443322


Q ss_pred             eeC------CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeee
Q 045682          123 LET------QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF  196 (309)
Q Consensus       123 ~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill  196 (309)
                      ...      ...+|||||+++++|.++..           .  .....++.|++.+|.|||   ..+||||||||.|||+
T Consensus       175 v~vp~p~~~~~~~LVME~i~G~~L~~l~~-----------~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl  238 (397)
T 4gyi_A          175 FPVPEPIAQSRHTIVMSLVDALPMRQVSS-----------V--PDPASLYADLIALILRLA---KHGLIHGDFNEFNILI  238 (397)
T ss_dssp             CSCCCEEEEETTEEEEECCSCEEGGGCCC-----------C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEE
T ss_pred             CCCCeeeeccCceEEEEecCCccHhhhcc-----------c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEE
Confidence            111      22369999999989887642           1  123568899999999999   8999999999999999


Q ss_pred             cCCC----------cEEEeecccccc
Q 045682          197 NEEN----------VAKLFDFSFSIS  212 (309)
Q Consensus       197 ~~~~----------~~kl~Dfg~a~~  212 (309)
                      ++++          .+.|+||+-+..
T Consensus       239 ~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          239 REEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             eCCCCcccccccccceEEEEeCCccc
Confidence            8776          389999996654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.56  E-value=9.9e-15  Score=124.05  Aligned_cols=145  Identities=14%  Similarity=-0.038  Sum_probs=113.5

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ...+.|.....+|.|+.+.||++...+..+++|............+.+|+.++..+ .+.+++++++++...+..++|||
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             HHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence            34456777777888888999999887889999998653212234588999999998 57788899999998889999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---------------------------------
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF---------------------------------  180 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~---------------------------------  180 (309)
                      |++|.+|.+.+.            +......++.+++.+|+.||...                                 
T Consensus        91 ~i~G~~l~~~~~------------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T 3tm0_A           91 EADGVLCSEEYE------------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             CCSSEEHHHHCC------------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred             ecCCeehhhccC------------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence            999999987631            01123478899999999999510                                 


Q ss_pred             -----------------------CCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          181 -----------------------PRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       181 -----------------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                                             ...++|+|++|.||++++++.+.|+||+.+.
T Consensus       159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                   1458999999999999876667899999774

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.41  E-value=8.1e-13  Score=111.74  Aligned_cols=136  Identities=15%  Similarity=0.055  Sum_probs=99.0

Q ss_pred             CCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCc--ceeeeeeeeeCCceEEEEEec
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRC--FFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ++....+.+.|..+.||++.. +|..+++|.....   ....+..|+.++..+.+.+  +++++++...++..++||||+
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i   97 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV   97 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred             CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence            344333334556699999987 5778999997554   2245778999999995444  567888888777899999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----------------------------------
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF-----------------------------------  180 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~-----------------------------------  180 (309)
                      +|.+|.  ..        .  .+   ...++.+++..|..||...                                   
T Consensus        98 ~G~~l~--~~--------~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (264)
T 1nd4_A           98 PGQDLL--SS--------H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH  162 (264)
T ss_dssp             SSEETT--TS--------C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred             CCcccC--cC--------c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence            998885  21        1  11   1357778888888888421                                   


Q ss_pred             --------------------CCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          181 --------------------PRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       181 --------------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                                          ...++|+|++|.||+++.++.+.|+|||.+..
T Consensus       163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                11299999999999998877778999998753

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.38  E-value=2.2e-12  Score=114.65  Aligned_cols=144  Identities=14%  Similarity=0.145  Sum_probs=109.0

Q ss_pred             ccCceeecCCeEEEEEEeCCeEEEEEEec--CCC-chhHHHHHHHHHHHhhcc--CCcceeeeeeeeeC---CceEEEEE
Q 045682           62 SEKVIMKRSFYTLYKGFCQERLISVMKFD--ASK-PRMYDCCINNIVYASQMI--HRCFFKLIGCCLET---QIPILVFE  133 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~---~~~~lv~e  133 (309)
                      ..+.|+.|.++.||+....+..+++|+..  ... ......+.+|+.++..+.  +..++++++++.+.   +..++|||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            35568999999999998877788888875  322 122346788999999995  45688999988776   45899999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---------------------------------
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF---------------------------------  180 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~---------------------------------  180 (309)
                      |++|.++.+..         ...++..++..++.+++.+|+.||...                                 
T Consensus       122 ~v~G~~l~~~~---------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          122 FVSGRVLWDQS---------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             CCCCBCCCCTT---------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             ecCCeecCCCc---------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            99998876531         234778888999999999999999510                                 


Q ss_pred             ----------------------CCCeEeCCCCCCCeeecCCCc--EEEeecccccccC
Q 045682          181 ----------------------PRPVIFRDFKLSNILFNEENV--AKLFDFSFSISIP  214 (309)
Q Consensus       181 ----------------------~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~a~~~~  214 (309)
                                            ...++|+|++|.||+++.++.  +.|+||+.+....
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~  250 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH  250 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence                                  256999999999999987753  6999999886543

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.92  E-value=4.3e-09  Score=91.11  Aligned_cols=138  Identities=17%  Similarity=0.127  Sum_probs=99.2

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCc--ceeeeeeeeeCC---ceEEEEEecc
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRC--FFKLIGCCLETQ---IPILVFEYIN  136 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~l~g~~~~~~---~~~lv~e~~~  136 (309)
                      .+.++.|.+..||+..   ..+++|.....  .....+.+|+.++..+ .+..  ++++++.....+   ..|+||++++
T Consensus        25 i~~~~~G~~n~v~~v~---~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN---RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CCEEEECSSEEEEEST---TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             eEecCCCCcceEEEEC---CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            4568999999999863   56888875432  3456788999999888 4433  445555443332   4589999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG-------------------------------------  179 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-------------------------------------  179 (309)
                      |.+|.+...         ..++..++..++.+++..++.||..                                     
T Consensus       100 G~~l~~~~~---------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (304)
T 3sg8_A          100 GVPLTPLLL---------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM  170 (304)
T ss_dssp             CEECCHHHH---------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred             CeECCcccc---------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence            988876431         2466777777888888888888741                                     


Q ss_pred             ------------------CCCCeEeCCCCCCCeeecC--CCcEEEeecccccccC
Q 045682          180 ------------------FPRPVIFRDFKLSNILFNE--ENVAKLFDFSFSISIP  214 (309)
Q Consensus       180 ------------------~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~  214 (309)
                                        ....++|+|++|.||+++.  +..+.|+||+.+....
T Consensus       171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~  225 (304)
T 3sg8_A          171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISD  225 (304)
T ss_dssp             HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEEC
T ss_pred             HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCC
Confidence                              0135899999999999988  5668999999886543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.85  E-value=2.6e-08  Score=86.30  Aligned_cols=137  Identities=10%  Similarity=-0.023  Sum_probs=93.6

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC---cceeeeeeee-eCCceEEEEEeccCC
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHR---CFFKLIGCCL-ETQIPILVFEYINCG  138 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~g~~~-~~~~~~lv~e~~~~g  138 (309)
                      ...++.|....||+.   +..+++|...  .......+..|+.+|..+.+.   .+++++.+.. ..+..++||||++|.
T Consensus        24 v~~l~~G~~n~v~~v---g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             EEEEEECSSEEEEEE---TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             eeecCCCcceeEEEE---CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            345788888899987   6778888742  223456789999999999542   3567777664 455688999999998


Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG---------------------------------------  179 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~---------------------------------------  179 (309)
                      ++.+..-         ..++..+...++.+++..|+.||..                                       
T Consensus        99 ~l~~~~~---------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~  169 (306)
T 3tdw_A           99 ILGEDGM---------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR  169 (306)
T ss_dssp             ECHHHHH---------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred             ECchhhh---------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence            8876321         1233444444445555554444421                                       


Q ss_pred             ------------------CCCCeEeCCCCCCCeeecC---CCc-EEEeeccccccc
Q 045682          180 ------------------FPRPVIFRDFKLSNILFNE---ENV-AKLFDFSFSISI  213 (309)
Q Consensus       180 ------------------~~~~iiH~dlkp~Nill~~---~~~-~kl~Dfg~a~~~  213 (309)
                                        ....++|+|+.|.||+++.   ++. +.|+||+.+...
T Consensus       170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                              1345799999999999987   355 589999987643

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.79  E-value=5.1e-08  Score=82.70  Aligned_cols=133  Identities=13%  Similarity=0.032  Sum_probs=95.0

Q ss_pred             eeecCCe-EEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEEeccCCChh
Q 045682           66 IMKRSFY-TLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFEYINCGSLA  141 (309)
Q Consensus        66 lg~G~~g-~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~  141 (309)
                      +..|..| .||+...  .+..+.+|+-..   .....+..|...|..+ .+-.+.++++++.+++..++|||++++.++.
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~  108 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF  108 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence            4445554 6898776  456788887543   2345688899999888 4445788999999999999999999998877


Q ss_pred             hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 045682          142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG------------------------------------------  179 (309)
Q Consensus       142 ~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~------------------------------------------  179 (309)
                      +....           .......+..+++..|.-||..                                          
T Consensus       109 ~~~~~-----------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (272)
T 4gkh_A          109 QVLEE-----------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE  177 (272)
T ss_dssp             HHHHH-----------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred             ccccC-----------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence            76431           1112234555666666666631                                          


Q ss_pred             -------------CCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          180 -------------FPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       180 -------------~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                                   ....++|+|+.+.||+++.++.+-|+||+.+..
T Consensus       178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                         012379999999999999887778999998754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.65  E-value=8.4e-08  Score=84.79  Aligned_cols=79  Identities=5%  Similarity=-0.146  Sum_probs=55.6

Q ss_pred             Cce-eecCCeEEEEEEeC--------CeEEEEEEecCCC---chhHHHHHHHHHHHhhc-cC--CcceeeeeeeeeC---
Q 045682           64 KVI-MKRSFYTLYKGFCQ--------ERLISVMKFDASK---PRMYDCCINNIVYASQM-IH--RCFFKLIGCCLET---  125 (309)
Q Consensus        64 ~~l-g~G~~g~V~~~~~~--------~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h--~niv~l~g~~~~~---  125 (309)
                      +.| +.|....+|+....        +..+++|......   ......+.+|+.++..+ .+  -.++++++++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            456 77888899988764        6788888754322   00124577899999888 33  3577888887665   


Q ss_pred             CceEEEEEeccCCChhh
Q 045682          126 QIPILVFEYINCGSLAD  142 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~  142 (309)
                      +..++||||++|.++.+
T Consensus       106 g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SSCEEEEECCCCBCCCB
T ss_pred             CCceEEEEecCCCChhh
Confidence            45789999999877654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.50  E-value=3.4e-06  Score=73.69  Aligned_cols=146  Identities=10%  Similarity=0.074  Sum_probs=83.1

Q ss_pred             CceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccC--Ccceeeee------eeeeCCceEEEEEec
Q 045682           64 KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIH--RCFFKLIG------CCLETQIPILVFEYI  135 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~g------~~~~~~~~~lv~e~~  135 (309)
                      ..|+.|..+.||+...++..+++|+....    ...+..|+.++..+..  -.+++++.      +....+..+++|+|+
T Consensus        38 ~~l~gG~~n~~~~v~~~~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i  113 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI  113 (346)
T ss_dssp             EECC----CEEEEEEETTEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred             eeccccccCcEEEEEeCCCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence            34666778899999886667999988752    1334455666665531  13444443      123456789999999


Q ss_pred             cCCChh-----------hhhh-hhC--CCC--CC-----CCCCCHHHH-------------------------------H
Q 045682          136 NCGSLA-----------DRIR-IQH--NPQ--PQ-----HEPLLLTHR-------------------------------L  163 (309)
Q Consensus       136 ~~gsL~-----------~~l~-~~~--~~~--~~-----~~~l~~~~~-------------------------------~  163 (309)
                      +|.++.           +.|. .|.  ...  ..     ...-.|...                               .
T Consensus       114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  193 (346)
T 2q83_A          114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID  193 (346)
T ss_dssp             CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred             cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence            986543           1111 111  100  00     011123211                               0


Q ss_pred             HHHHHHHHHHHHhhc----------CCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          164 KIAKDIANAIAYLHV----------GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       164 ~i~~~ia~~l~yLH~----------~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      .+...+..++.+|+.          .....++|+|+.+.||+++.++.+.|+||+.+...
T Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g  253 (346)
T 2q83_A          194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD  253 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence            111223445666652          01578999999999999988889999999987543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.47  E-value=1.1e-06  Score=78.83  Aligned_cols=74  Identities=8%  Similarity=-0.001  Sum_probs=50.1

Q ss_pred             cCceeecCCeEEEEEEe--CCeEEEEEEecCCCc-------hhHHHHHHHHHHHhhccC--C-cceeeeeeeeeCCceEE
Q 045682           63 EKVIMKRSFYTLYKGFC--QERLISVMKFDASKP-------RMYDCCINNIVYASQMIH--R-CFFKLIGCCLETQIPIL  130 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-niv~l~g~~~~~~~~~l  130 (309)
                      .+.||.|.++.||++..  .++.+++|.......       .....+..|..++..+..  | .+++++.+  +....++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            45689999999999976  568899998643211       123456789999988732  3 44566644  3455789


Q ss_pred             EEEeccCC
Q 045682          131 VFEYINCG  138 (309)
Q Consensus       131 v~e~~~~g  138 (309)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999864

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.22  E-value=1.1e-05  Score=69.88  Aligned_cols=143  Identities=8%  Similarity=-0.001  Sum_probs=94.4

Q ss_pred             ccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhcc---CCcceeeeeeeeeCCceEEEEEeccCC
Q 045682           62 SEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI---HRCFFKLIGCCLETQIPILVFEYINCG  138 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~~~~~~lv~e~~~~g  138 (309)
                      ....|+.|....+|+...++..+++|.....   ....+..|+..|+.+.   ...++++++++...+..++||||+++.
T Consensus        40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eeEEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            3456899999999999887788899986543   3566889999999883   367889999888788899999999987


Q ss_pred             Chhh--------hhh-hhCCCC-CC----------------CCCCCHHHHH---HHHH----------------HHHHH-
Q 045682          139 SLAD--------RIR-IQHNPQ-PQ----------------HEPLLLTHRL---KIAK----------------DIANA-  172 (309)
Q Consensus       139 sL~~--------~l~-~~~~~~-~~----------------~~~l~~~~~~---~i~~----------------~ia~~-  172 (309)
                      ++..        .|. .|.... ..                .-.-+|....   ++..                .++.. 
T Consensus       117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l  196 (312)
T 3jr1_A          117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV  196 (312)
T ss_dssp             CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence            6531        121 122111 00                0012454321   1111                11111 


Q ss_pred             HHHhhc-CCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          173 IAYLHV-GFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       173 l~yLH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ...|.. .....++|+|+.+.|++++.++ +-|.||.
T Consensus       197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            223421 2256799999999999999887 8999985

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.16  E-value=1.1e-05  Score=72.82  Aligned_cols=73  Identities=3%  Similarity=-0.057  Sum_probs=45.6

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCC----Cc-----hhHHHHHHHHHHHhh-ccCCcceeeeeeeeeCCceEEEE
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDAS----KP-----RMYDCCINNIVYASQ-MIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----~~-----~~~~~~~~e~~~l~~-l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      .+.||.|..+.||++..++..++||.....    ..     .....+..|+..+.. .....+++++.+.  .+..++||
T Consensus        39 i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~  116 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGM  116 (420)
T ss_dssp             EEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEE
T ss_pred             EEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEE
Confidence            456899999999999777788999943221    00     122233333332221 2334667777665  56679999


Q ss_pred             Eec-cC
Q 045682          133 EYI-NC  137 (309)
Q Consensus       133 e~~-~~  137 (309)
                      ||+ ++
T Consensus       117 e~l~~g  122 (420)
T 2pyw_A          117 RYLEPP  122 (420)
T ss_dssp             CCCCTT
T ss_pred             eecCCc
Confidence            999 76

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=98.13  E-value=2.4e-05  Score=66.79  Aligned_cols=77  Identities=9%  Similarity=-0.012  Sum_probs=56.1

Q ss_pred             CCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-C--CcceeeeeeeeeCCceEEEEEec
Q 045682           60 YDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMI-H--RCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        60 ~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +.....+|.|..+.||+.+. +|+.|.+|+-..........|..|+..|+.+. .  -.+++++++.    ..++||||+
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l   92 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV   92 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence            44556789999999999999 88999999866554444456788999999883 2  2345555432    347899999


Q ss_pred             cCCCh
Q 045682          136 NCGSL  140 (309)
Q Consensus       136 ~~gsL  140 (309)
                      +++..
T Consensus        93 ~~~~~   97 (288)
T 3f7w_A           93 DERPP   97 (288)
T ss_dssp             CCCCC
T ss_pred             cccCC
Confidence            87654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.85  E-value=0.00011  Score=63.47  Aligned_cols=163  Identities=13%  Similarity=0.119  Sum_probs=88.8

Q ss_pred             ccHHHHHHHhcCCCcc-----CceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCc--ceeeee
Q 045682           48 FSAKELEIATNNYDSE-----KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRC--FFKLIG  120 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~g  120 (309)
                      ++.+++...-..|..+     +.|+.|....+|+...++..+++|......  ....+..|+.++..+....  +++++.
T Consensus         7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~   84 (322)
T 2ppq_A            7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP   84 (322)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence            5556665555556542     335667778999998855578899876531  1234556777777773222  344442


Q ss_pred             e------eeeCCceEEEEEeccCCChhh-----------hhh-hhC--CCCCCC-----CCCCHHHHHH-----------
Q 045682          121 C------CLETQIPILVFEYINCGSLAD-----------RIR-IQH--NPQPQH-----EPLLLTHRLK-----------  164 (309)
Q Consensus       121 ~------~~~~~~~~lv~e~~~~gsL~~-----------~l~-~~~--~~~~~~-----~~l~~~~~~~-----------  164 (309)
                      .      ....+..+++++|++|.++..           .|. .|.  .+....     ....|...+.           
T Consensus        85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  164 (322)
T 2ppq_A           85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK  164 (322)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred             CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence            2      122456789999999865421           111 111  010000     0012322110           


Q ss_pred             -HHHHHHHHHHHhhc----CCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          165 -IAKDIANAIAYLHV----GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       165 -i~~~ia~~l~yLH~----~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                       +...+...+.++..    .....++|+|+.+.|||++.++.+.|+||+.+..
T Consensus       165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence             00113344455441    1145799999999999999876678999997753

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.83  E-value=0.00011  Score=63.14  Aligned_cols=144  Identities=11%  Similarity=0.029  Sum_probs=77.6

Q ss_pred             cCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEEEec-cCCCh
Q 045682           63 EKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFEYI-NCGSL  140 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~-~~gsL  140 (309)
                      .+.|+.|....+|+.    ..+++|......... -....|+.++..+. +.-.++++++.  ...-++++||+ ++.++
T Consensus        23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             CEEEESCSSEEEEEE----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred             eeEcCCcccccccee----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence            567888999999998    568888765432111 12346888887773 32225666544  33457899999 66555


Q ss_pred             hh--------h-------hh-hhCCCCCCCCCCCH-HHHHHHHHH--------------HHHHH----HHhh-cCCCCCe
Q 045682          141 AD--------R-------IR-IQHNPQPQHEPLLL-THRLKIAKD--------------IANAI----AYLH-VGFPRPV  184 (309)
Q Consensus       141 ~~--------~-------l~-~~~~~~~~~~~l~~-~~~~~i~~~--------------ia~~l----~yLH-~~~~~~i  184 (309)
                      ..        .       |. .|..+.......+. .....+...              +...+    ..+. ......+
T Consensus        96 ~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l  175 (301)
T 3dxq_A           96 SPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAA  175 (301)
T ss_dssp             CHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEE
T ss_pred             CHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCcee
Confidence            32        1       11 12211111111111 111111100              11111    1111 1124568


Q ss_pred             EeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          185 IFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       185 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +|+|+.|.||+ ..++.+.++||..+...+
T Consensus       176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~g~  204 (301)
T 3dxq_A          176 CHCDPLCENFL-DTGERMWIVDWEYSGMND  204 (301)
T ss_dssp             ECSCCCGGGEE-ECSSCEEECCCTTCEEEC
T ss_pred             eccCCCcCCEE-ECCCCEEEEecccccCCC
Confidence            99999999999 566778999999876543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.76  E-value=0.00049  Score=59.59  Aligned_cols=146  Identities=13%  Similarity=0.120  Sum_probs=82.6

Q ss_pred             ceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCC--cceeeeee-----eeeCCceEEEEEecc
Q 045682           65 VIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHR--CFFKLIGC-----CLETQIPILVFEYIN  136 (309)
Q Consensus        65 ~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~g~-----~~~~~~~~lv~e~~~  136 (309)
                      .++ |....||+... +|+.+++|...... .....+..|..++..+...  .+++++..     ...++..+++|+|++
T Consensus        33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~  110 (328)
T 1zyl_A           33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG  110 (328)
T ss_dssp             EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred             eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence            466 77789998877 56689999986432 1235667788888887422  24555543     122455678999998


Q ss_pred             CCChhh-----------hhh-hhC--C--CCCCCCCCCHHHH----------------------HHHHHHHHHHHHHhhc
Q 045682          137 CGSLAD-----------RIR-IQH--N--PQPQHEPLLLTHR----------------------LKIAKDIANAIAYLHV  178 (309)
Q Consensus       137 ~gsL~~-----------~l~-~~~--~--~~~~~~~l~~~~~----------------------~~i~~~ia~~l~yLH~  178 (309)
                      |.++..           .|. .|.  .  ........++...                      ...+..++..+.-+-.
T Consensus       111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  190 (328)
T 1zyl_A          111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR  190 (328)
T ss_dssp             CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            855431           111 111  0  0001112222211                      1111222222222210


Q ss_pred             -CCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          179 -GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       179 -~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                       .....++|+|+.+.||+++ + .+.|+||+.+...+
T Consensus       191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g~  225 (328)
T 1zyl_A          191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNGP  225 (328)
T ss_dssp             SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEEC
T ss_pred             hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcCc
Confidence             0156789999999999999 4 89999998776543

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.74  E-value=0.0002  Score=63.53  Aligned_cols=144  Identities=18%  Similarity=0.145  Sum_probs=84.8

Q ss_pred             CceeecCCeEEEEEEeC---------CeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           64 KVIMKRSFYTLYKGFCQ---------ERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +.|..|-...+|+....         +..+.+++.... ........+|..+++.+ .+.-.+++++++.+    .+|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            35667888889998872         367888875332 22345567899999988 44444677776654    28999


Q ss_pred             eccCCChhhh--------------hh-hhCCCCCCCCCC--CHHHHHHHHHHHHH-------------------HHHHhh
Q 045682          134 YINCGSLADR--------------IR-IQHNPQPQHEPL--LLTHRLKIAKDIAN-------------------AIAYLH  177 (309)
Q Consensus       134 ~~~~gsL~~~--------------l~-~~~~~~~~~~~l--~~~~~~~i~~~ia~-------------------~l~yLH  177 (309)
                      |++|.+|..-              |. .|..+..-....  -|.++.++..++..                   .+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998655421              11 122211111222  24455555544322                   122222


Q ss_pred             ----c-CCCCCeEeCCCCCCCeeecCC----CcEEEeecccccc
Q 045682          178 ----V-GFPRPVIFRDFKLSNILFNEE----NVAKLFDFSFSIS  212 (309)
Q Consensus       178 ----~-~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~~  212 (309)
                          . .....++|+|+.+.||+++.+    +.+.++||.++..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence                1 124579999999999999876    7899999998754

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.71  E-value=0.00019  Score=64.95  Aligned_cols=72  Identities=14%  Similarity=-0.021  Sum_probs=49.3

Q ss_pred             cCceeecCCeEEEEEEeC---------CeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEE
Q 045682           63 EKVIMKRSFYTLYKGFCQ---------ERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ...|+.|....+|++...         +..+.+|+.....  ....+..|..++..+. +.-.+++++.+.+    .+|+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            345788888999999873         4678888874321  1245668999999884 4334677776542    3899


Q ss_pred             EeccCCCh
Q 045682          133 EYINCGSL  140 (309)
Q Consensus       133 e~~~~gsL  140 (309)
                      ||++|.+|
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99986444

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.71  E-value=0.0003  Score=61.19  Aligned_cols=147  Identities=12%  Similarity=0.030  Sum_probs=75.6

Q ss_pred             CceeecCCeE-EEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-C-CcceeeeeeeeeCCceEEEEEeccCCC
Q 045682           64 KVIMKRSFYT-LYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMI-H-RCFFKLIGCCLETQIPILVFEYINCGS  139 (309)
Q Consensus        64 ~~lg~G~~g~-V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~niv~l~g~~~~~~~~~lv~e~~~~gs  139 (309)
                      ..|+.|+... +|+... ++..+++|.......   ..+..|+.++..+. + -.+++++.+....+  +++||++.+.+
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence            3465554444 667766 377777776443321   22445677777663 2 23566776643333  78999998766


Q ss_pred             hhhhhhh-------------------hCCCCCCCCCCCHHHHH-------H-------------HHHHHHHHHHHhh---
Q 045682          140 LADRIRI-------------------QHNPQPQHEPLLLTHRL-------K-------------IAKDIANAIAYLH---  177 (309)
Q Consensus       140 L~~~l~~-------------------~~~~~~~~~~l~~~~~~-------~-------------i~~~ia~~l~yLH---  177 (309)
                      +.+++..                   |..........+.....       .             ....+...+..+.   
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            6544321                   11111001112111100       0             0011111222221   


Q ss_pred             cCCCCCeEeCCCCCCCeeecCC----CcEEEeecccccccCC
Q 045682          178 VGFPRPVIFRDFKLSNILFNEE----NVAKLFDFSFSISIPE  215 (309)
Q Consensus       178 ~~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~~~~~  215 (309)
                      ......++|+|+.+.||+++.+    +.+.|+||+.+...+.
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence            1115689999999999999875    6899999998876544

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.60  E-value=0.00058  Score=62.20  Aligned_cols=72  Identities=8%  Similarity=-0.039  Sum_probs=46.5

Q ss_pred             CceeecCCeEEEEEEeCC--eEEEEEEecCCCchhHHHHHHHHHHHhhccCCcc-eeeeeeeeeCCceEEEEEeccCCCh
Q 045682           64 KVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRCF-FKLIGCCLETQIPILVFEYINCGSL  140 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e~~~~gsL  140 (309)
                      ..|+.|-...+|+....+  ..+++|+......... .-..|..++..+...++ +++++++. +   .+||||++|.+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCccC
Confidence            357778889999998854  8888887644321111 12478888988854444 57777763 2   359999987554

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.55  E-value=0.00038  Score=61.52  Aligned_cols=72  Identities=13%  Similarity=0.011  Sum_probs=43.5

Q ss_pred             CceeecCCeEEEEEEeCC----------eEEEEEEecCCCchhHHHHHHHHHHHhhccCCc-ceeeeeeeeeCCceEEEE
Q 045682           64 KVIMKRSFYTLYKGFCQE----------RLISVMKFDASKPRMYDCCINNIVYASQMIHRC-FFKLIGCCLETQIPILVF  132 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~g~~~~~~~~~lv~  132 (309)
                      ..|+.|....+|+....+          ..+++|....... .......|..++..+...+ ++++++..  .  -++||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            457778888999998743          6788887644321 1112357888888884333 45666544  2  37899


Q ss_pred             EeccCCCh
Q 045682          133 EYINCGSL  140 (309)
Q Consensus       133 e~~~~gsL  140 (309)
                      ||++|.++
T Consensus       114 e~i~G~~l  121 (369)
T 3c5i_A          114 EWLYGDPL  121 (369)
T ss_dssp             ECCCSEEC
T ss_pred             EEecCCcC
Confidence            99987544

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.32  E-value=0.0015  Score=57.01  Aligned_cols=34  Identities=18%  Similarity=0.304  Sum_probs=29.3

Q ss_pred             CCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          181 PRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       181 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      ...++|+|+.+.||+++.++.+.|+||+.+...+
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~  238 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP  238 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence            4579999999999999988889999998776543

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.93  E-value=0.0025  Score=57.36  Aligned_cols=143  Identities=15%  Similarity=0.150  Sum_probs=84.6

Q ss_pred             CceeecCCeEEEEEEeC---------CeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           64 KVIMKRSFYTLYKGFCQ---------ERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +.+..|-...+|+....         +..+++++....... .-.-.+|..+++.+ .+.-.+++++.+.    -++|||
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e  150 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE  150 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence            35677888899999874         578888885443211 11235788888888 3444456665332    378999


Q ss_pred             eccCCChhh-------h-------hh-hhCCCC-----C---CCCCCCHHHHHHHHHHH-------------------HH
Q 045682          134 YINCGSLAD-------R-------IR-IQHNPQ-----P---QHEPLLLTHRLKIAKDI-------------------AN  171 (309)
Q Consensus       134 ~~~~gsL~~-------~-------l~-~~~~~~-----~---~~~~l~~~~~~~i~~~i-------------------a~  171 (309)
                      |++|.+|..       .       |. .|..+.     .   ...+..|.++.++..++                   ..
T Consensus       151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~  230 (424)
T 3mes_A          151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE  230 (424)
T ss_dssp             CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred             EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence            999866431       0       11 111100     0   12222344444443322                   12


Q ss_pred             HHHHhh---------------------cCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          172 AIAYLH---------------------VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       172 ~l~yLH---------------------~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      .+.+|.                     ......++|+|+.+.||+ +.++.+.++||.++..
T Consensus       231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            223322                     111456899999999999 8888999999998754

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.23  E-value=0.046  Score=48.67  Aligned_cols=30  Identities=30%  Similarity=0.410  Sum_probs=25.4

Q ss_pred             CeEeCCCCCCCeee------cCCCcEEEeecccccc
Q 045682          183 PVIFRDFKLSNILF------NEENVAKLFDFSFSIS  212 (309)
Q Consensus       183 ~iiH~dlkp~Nill------~~~~~~kl~Dfg~a~~  212 (309)
                      .++|+|+.+.|||+      +++..+.++||.+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      4567899999998854

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=93.99  E-value=0.38  Score=38.81  Aligned_cols=60  Identities=13%  Similarity=0.130  Sum_probs=45.4

Q ss_pred             ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          139 SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       139 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ||.+.|..      .+.+++++++|.++.|.+.+|.-+-.  ...-..+=+.|..|++..+|+|...+
T Consensus        34 SL~eIL~~------~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~   93 (229)
T 2yle_A           34 SLEEILRL------YNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP   93 (229)
T ss_dssp             EHHHHHHH------HTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred             cHHHHHHH------cCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc
Confidence            88999874      46899999999999999999887721  11111233457899999999998875

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=93.78  E-value=0.3  Score=39.36  Aligned_cols=86  Identities=14%  Similarity=0.160  Sum_probs=62.1

Q ss_pred             cCCcceeeeeeeeeCCceEEEEEeccCC-ChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHH-HhhcCCCCCeEeCC
Q 045682          111 IHRCFFKLIGCCLETQIPILVFEYINCG-SLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIA-YLHVGFPRPVIFRD  188 (309)
Q Consensus       111 ~h~niv~l~g~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~-yLH~~~~~~iiH~d  188 (309)
                      .||++  -..+-.+++.+.+.++.-+++ ++. .+          ..++...+++++.+|+.... +++     .-+|--
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i----------~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~  109 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AI----------RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFI  109 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HH----------HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HH----------HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEE
Confidence            67877  333445666666666655443 333 22          35788899999999987776 555     557788


Q ss_pred             CCCCCeeecCCCcEEEeecccccccC
Q 045682          189 FKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       189 lkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      |.|+||+++.++.++|.-.|+-..++
T Consensus       110 l~P~NL~f~~~~~p~i~hRGi~~~lp  135 (219)
T 4ano_A          110 VCPENLMFNRALEPFFLHVGVKESLP  135 (219)
T ss_dssp             CCGGGEEECTTCCEEESCCEETTTBS
T ss_pred             EeCceEEEeCCCcEEEEEcCCcccCC
Confidence            99999999999999999999765443

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=92.66  E-value=0.27  Score=39.47  Aligned_cols=87  Identities=6%  Similarity=-0.019  Sum_probs=62.5

Q ss_pred             cCCcceeeeeeeeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCC
Q 045682          111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFK  190 (309)
Q Consensus       111 ~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlk  190 (309)
                      .||+++.. .+-.+++.+.+.++.-+  +...|-        .-...+...+++++.+|+....+++     .-+|--|.
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~--------~ik~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~  106 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFD--------NIKSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLA  106 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGG--------GGGGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCS
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCc--ccCCHH--------HHHhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEe
Confidence            68888765 45555565555555443  333332        1245788899999999998886666     45688899


Q ss_pred             CCCeeecCCCcEEEeeccccccc
Q 045682          191 LSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       191 p~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+||+++.++.|++.-.|+...+
T Consensus       107 P~NL~f~~~~~p~i~~RGik~~l  129 (215)
T 4ann_A          107 PDELFFTRDGLPIAKTRGLQNVV  129 (215)
T ss_dssp             GGGEEECTTSCEEESCCEETTTB
T ss_pred             cceEEEcCCCCEEEEEccCccCC
Confidence            99999999999999999875544

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=90.11  E-value=0.038  Score=50.24  Aligned_cols=60  Identities=5%  Similarity=-0.074  Sum_probs=18.3

Q ss_pred             ccCceeecCCeEEEEEEeC--CeEEEE------EEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee
Q 045682           62 SEKVIMKRSFYTLYKGFCQ--ERLISV------MKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE  124 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~~--~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  124 (309)
                      ..+.||   ||.||+|.+.  ..+|||      |......  ......|.+|..++..++|||+++.+++...
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            345676   9999999994  367888      7655432  2233568889999999999999999887653

>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3

Probab=84.39  E-value=8.1  Score=33.13  Aligned_cols=135  Identities=13%  Similarity=0.059  Sum_probs=70.9

Q ss_pred             ecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeee----------------------eeeC
Q 045682           68 KRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGC----------------------CLET  125 (309)
Q Consensus        68 ~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~----------------------~~~~  125 (309)
                      ++|.+-||.+..++..+.||-.   .....+-+..++...-.+.-|+..-+.-.                      ....
T Consensus        78 ~~Gstgvff~~td~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~~l~~  154 (342)
T 1cja_A           78 EKGTEGLFFVETESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVITTLAN  154 (342)
T ss_dssp             CSTTSCEEEEEESSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHHHHTT
T ss_pred             cCCCCCeEEEEeCCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHHHhhc
Confidence            3444556666557888999944   22333445555555555566653222211                      0012


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHH--HHHHHhh-cCCCCCeEe-CCCCCCCeeecCCCc
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA--NAIAYLH-VGFPRPVIF-RDFKLSNILFNEENV  201 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia--~~l~yLH-~~~~~~iiH-~dlkp~Nill~~~~~  201 (309)
                      +..+++|||.+|..|.+.-.  .   .-...+..    +.+.++.  -++.++. +....+.+. ..-.+.|||++.++.
T Consensus       155 ~~~~l~meyv~G~~L~e~~~--~---~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~  225 (342)
T 1cja_A          155 QANILLMELVRGITLNKLTT--T---SAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA  225 (342)
T ss_dssp             CSEEEEEECCCEEESTTCCS--S---SHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred             ccceehhhhcCCCccccchh--h---hhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence            35679999999766665410  0   00011222    2333332  2344444 332223222 125789999976554


Q ss_pred             -EEEeecccccccC
Q 045682          202 -AKLFDFSFSISIP  214 (309)
Q Consensus       202 -~kl~Dfg~a~~~~  214 (309)
                       +.++|-+++..-+
T Consensus       226 ~~~~IDhn~af~~~  239 (342)
T 1cja_A          226 TVVPIDSKIIPLDA  239 (342)
T ss_dssp             CEEECSCCCCCCCS
T ss_pred             eEEEEcCCccccCC
Confidence             8999999987644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	309
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-27
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-24
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-23
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-22
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-21
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-20
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-20
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-19
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-19
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-19
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-19
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-19
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-18
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-18
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	9e-18
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-17
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-16
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-16
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-16
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-15
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-15
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-15
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-14
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-12
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-11
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	9e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-09
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-09
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-04

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 3e-27
 Identities = 50/300 (16%), Positives = 96/300 (32%), Gaps = 72/300 (24%)

Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFCQERL-ISVMKFDASKPRMYDCCINNIVYASQM 110
           + EI        + I   SF T+YKG     + + ++   A  P+      N +    + 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61

Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            H      +G     Q+  +V ++    SL   + I            +   + IA+  A
Sbjct: 62  RHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTA 114

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG-------------- 216
             + YLH    + +I RD K +NI  +E+   K+ DF  +                    
Sbjct: 115 QGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171

Query: 217 -----------------------------ELLTGLRAFDLARLNEDDGYVALRDHVKKYF 247
                                        EL+TG   +        +    +   V + +
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-----NINNRDQIIFMVGRGY 226

Query: 248 EEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
               L+++         +C       +A   L+ EC+ +   +RP    +   ++ + RS
Sbjct: 227 LSPDLSKVRS-------NCP------KAMKRLMAECLKKKRDERPLFPQILASIELLARS 273

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.6 bits (242), Expect = 3e-24
 Identities = 57/299 (19%), Positives = 104/299 (34%), Gaps = 50/299 (16%)

Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFCQERL---------ISVMKFDASKPRMYDCCI 101
             LE   NN +  + I + +F  +++      L         + ++K +AS   M     
Sbjct: 6   LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA-DMQADFQ 64

Query: 102 NNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR---------------- 145
                 ++  +    KL+G C   +   L+FEY+  G L + +R                
Sbjct: 65  REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124

Query: 146 -IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 204
                  P   PL    +L IA+ +A  +AYL     R  + RD    N L  E  V K+
Sbjct: 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKI 181

Query: 205 FDFSFSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKY------------------ 246
            DF  S +I   +         +         +    +  +                   
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241

Query: 247 -FEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
            +      E+I  +  G+     +   L+ Y +L+  C ++ P DRP+   + + L++M
Sbjct: 242 PYYGMAHEEVIYYVRDGNILACPENCPLELY-NLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.0 bits (233), Expect = 7e-23
 Identities = 43/298 (14%), Positives = 95/298 (31%), Gaps = 47/298 (15%)

Query: 47  TFSAKELEIATNNYDSE---------KVIMKRSFYTLYKGFC-----QERLISVMKFDAS 92
            F+ ++   A   +  E         +VI    F  +  G       +E  +++    + 
Sbjct: 6   PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG 65

Query: 93  K-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQ 151
              +     ++      Q  H     L G   ++   +++ E++  GSL   +R      
Sbjct: 66  YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF 125

Query: 152 PQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 211
              +       + + + IA  + YL        + RD    NIL N   V K+ DF  S 
Sbjct: 126 TVIQ------LVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSR 176

Query: 212 SIPEGELLTGLRAFDLARL---------NEDDGYVALRD-------------HVKKYFEE 249
            + +        +    ++          +   + +  D             + ++ + +
Sbjct: 177 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 236

Query: 250 DRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
               ++I+ +    R          A   L+ +C  +    RP    +   L +M R+
Sbjct: 237 MTNQDVINAIEQDYRL-PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 2e-22
 Identities = 45/265 (16%), Positives = 90/265 (33%), Gaps = 24/265 (9%)

Query: 54  EIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHR 113
            +        + I K  F  +  G  +   ++V              +      +Q+ H 
Sbjct: 3   ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHS 60

Query: 114 CFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANA 172
              +L+G  +E +  + +V EY+  GSL D +R +         L     LK + D+  A
Sbjct: 61  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-----RSVLGGDCLLKFSLDVCEA 115

Query: 173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA-RLN 231
           + YL        + RD    N+L +E+NVAK+ DF  +      +    L     A    
Sbjct: 116 MEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEAL 172

Query: 232 EDDGYVALRD------------HVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHL 279
            +  +    D               +        + + P +         +    A   +
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEV 232

Query: 280 IFECVNESPVDRPTMVDVAKKLKQM 304
           +  C +     RP+ + + ++L+ +
Sbjct: 233 MKNCWHLDAAMRPSFLQLREQLEHI 257

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 3e-22
 Identities = 51/274 (18%), Positives = 92/274 (33%), Gaps = 28/274 (10%)

Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI 111
           E E+        + +    F  ++ G+        +K         D  +       Q+ 
Sbjct: 7   EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ 66

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H+   +L     +  I  ++ EY+  GSL D ++      P    L +   L +A  IA 
Sbjct: 67  HQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMAAQIAE 120

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT--------GLR 223
            +A++     R  I RD + +NIL ++    K+ DF  +  I + E              
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 177

Query: 224 AFDLARLNEDDGYV----------ALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQL 273
           A +                      +  H +  +      E+I  L  G R     +   
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCP 236

Query: 274 QAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
           +    L+  C  E P DRPT   +   L+  + +
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.6 bits (224), Expect = 8e-22
 Identities = 41/275 (14%), Positives = 99/275 (36%), Gaps = 28/275 (10%)

Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISV-MKFDASKPRMYDCCINNIVYASQM 110
           + E+   +   +  +    +  +Y+G  ++  ++V +K         +  +       ++
Sbjct: 11  KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 70

Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
            H    +L+G C       ++ E++  G+L D +R  +      + +     L +A  I+
Sbjct: 71  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLYMATQIS 125

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT-----GLRAF 225
           +A+ YL     +  I RD    N L  E ++ K+ DF  S  +                +
Sbjct: 126 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182

Query: 226 DLARLNEDDGY-------------VALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQ 272
                   + +               +  +    +    L+++ + L+  D      E  
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGC 241

Query: 273 LQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
            +    L+  C   +P DRP+  ++ +  + M++ 
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 276

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 7e-21
 Identities = 45/284 (15%), Positives = 106/284 (37%), Gaps = 39/284 (13%)

Query: 51  KELEIATNNYD-SEKVIMKRSFYTLYKGFCQERL------ISVMKFDASKPRMYDCCINN 103
           K+L +  +N   ++  +   +F ++ +G  + R       I V+K   ++    +  +  
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMRE 59

Query: 104 IVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
                Q+ +    +LIG C + +  +LV E    G L   +        + E + +++  
Sbjct: 60  AQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV------GKREEIPVSNVA 112

Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLR 223
           ++   ++  + YL     +  + RD    N+L    + AK+ DF  S ++   +     R
Sbjct: 113 ELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 169

Query: 224 ----------AFDLARLNEDDGYVALRDHV----------KKYFEEDRLNEIIDPLIMGD 263
                     A +     +      +  +           +K +++ +  E++  +  G 
Sbjct: 170 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 229

Query: 264 RSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
           R      +       L+ +C      DRP  + V ++++  Y S
Sbjct: 230 RM-ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 2e-20
 Identities = 26/171 (15%), Positives = 61/171 (35%), Gaps = 12/171 (7%)

Query: 53  LEIATNNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFD-ASKPRMYDCCINNIVYASQ 109
           +E+  ++++    +   +   ++K   +    +++        KP + +  I  +    +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 110 MIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
                     G         +  E+++ GSL   ++       +   +      K++  +
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-------KAGRIPEQILGKVSIAV 113

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
              + YL       ++ RD K SNIL N     KL DF  S  + +    +
Sbjct: 114 IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 5e-20
 Identities = 40/298 (13%), Positives = 81/298 (27%), Gaps = 47/298 (15%)

Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFD-ASKPRMYDCCIN 102
            + E    N +  KV+   +F  +                ++V      +     +  ++
Sbjct: 30  LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS 89

Query: 103 NIVYASQMI-HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHE------ 155
            +   +Q+  H     L+G C  +    L+FEY   G L + +R +     + E      
Sbjct: 90  ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 149

Query: 156 ----------PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 205
                      L     L  A  +A  + +L     +  + RD    N+L     V K+ 
Sbjct: 150 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKIC 206

Query: 206 DFSFSISIPEGELLT---------GLRAFDLARLNEDDGYVALRDHV----------KKY 246
           DF  +  I                   A +            +  +              
Sbjct: 207 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 266

Query: 247 FEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
           +    ++     LI             +    ++  C       RP+  ++   L   
Sbjct: 267 YPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 324

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 7e-20
 Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 28/265 (10%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFK 117
            +    K +    F  +  G  + +    +K         D  I        + H    +
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLH 177
           L G C + +   ++ EY+  G L + +R   +             L++ KD+  A+ YL 
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ------QLLEMCKDVCEAMEYLE 117

Query: 178 VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLAR-----LNE 232
               +  + RD    N L N++ V K+ DF  S  + + E  + + +    R     +  
Sbjct: 118 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 174

Query: 233 DDGY-------------VALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHL 279
              +               +    K  +E    +E  + +  G R         +    +
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASEKVYTI 233

Query: 280 IFECVNESPVDRPTMVDVAKKLKQM 304
           ++ C +E   +RPT   +   +  +
Sbjct: 234 MYSCWHEKADERPTFKILLSNILDV 258

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 8e-20
 Identities = 42/302 (13%), Positives = 87/302 (28%), Gaps = 42/302 (13%)

Query: 42  YNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQE-------RLISVMKFDASKP 94
            +P       + E   N     K +   +F  + +              ++V     S  
Sbjct: 7   IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66

Query: 95  RMYDCCINNIVYASQMI--HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN--- 149
                 + + +     +  H     L+G C      +++ EY   G L + +R + +   
Sbjct: 67  LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 126

Query: 150 --------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
                    +     L L   L  +  +A  +A+L     +  I RD    NIL     +
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRI 183

Query: 202 AKLFDFSFSISIPEGELLT-----GLRAFDLARLNEDDGYVALRDHV------------- 243
            K+ DF  +  I             L    +A  +  +        V             
Sbjct: 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243

Query: 244 -KKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK 302
               +    ++     +I         E        ++  C +  P+ RPT   + + ++
Sbjct: 244 GSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303

Query: 303 QM 304
           + 
Sbjct: 304 KQ 305

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 1e-19
 Identities = 49/282 (17%), Positives = 94/282 (33%), Gaps = 28/282 (9%)

Query: 44  PYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINN 103
                +    EI   +   E  + +  F  ++ G         +K         +  +  
Sbjct: 3   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 62

Query: 104 IVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
                ++ H    +L     E  I I V EY++ GSL D ++     +    P      +
Sbjct: 63  AQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLK-GETGKYLRLP----QLV 116

Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT--- 220
            +A  IA+ +AY+        + RD + +NIL  E  V K+ DF  +  I + E      
Sbjct: 117 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 173

Query: 221 --GLRAFDLARLNEDDGYVALRD-------------HVKKYFEEDRLNEIIDPLIMGDRS 265
                 +          +    D               +  +      E++D +  G R 
Sbjct: 174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 233

Query: 266 CSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
                +  ++   L+ +C  + P +RPT   +   L+  + S
Sbjct: 234 -PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 274

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 1e-19
 Identities = 43/298 (14%), Positives = 95/298 (31%), Gaps = 41/298 (13%)

Query: 48  FSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERL---------ISVMKFDASKPRMYD 98
           + A + E   +     K + + +F  + +                + ++K  A+      
Sbjct: 3   YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 62

Query: 99  CCINNIVYASQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHE-- 155
                 +      H     L+G C +   P+ ++ E+   G+L+  +R + N    ++  
Sbjct: 63  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 122

Query: 156 -------PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
                   L L H +  +  +A  + +L     R  I RD    NIL +E+NV K+ DF 
Sbjct: 123 PEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFG 179

Query: 209 FSISIPEGELLT---------GLRAFDLARLNEDDGYVALRDH----------VKKYFEE 249
            +  I +                 A +            +                 +  
Sbjct: 180 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 239

Query: 250 DRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
            +++E     +         +         + +C +  P  RPT  ++ + L  + ++
Sbjct: 240 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 2e-19
 Identities = 46/273 (16%), Positives = 97/273 (35%), Gaps = 38/273 (13%)

Query: 63  EKVIMKRSFYTLYKGFCQERL------ISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
           +K +   +F T+ KG+ Q +       + ++K +A+ P + D  +       Q+ +    
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL 176
           ++IG C E +  +LV E    G L   +        Q+  +   + +++   ++  + YL
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYL-------QQNRHVKDKNIIELVHQVSMGMKYL 123

Query: 177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLR----------AFD 226
                   + RD    N+L   ++ AK+ DF  S ++   E     +          A +
Sbjct: 124 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180

Query: 227 LARLNEDDG----------YVALRDHVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAY 276
                +                   + +K +   + +E+   L  G+R         +  
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM-GCPAGCPREM 239

Query: 277 AHLIFECVNESPVDRPTMVDVAKKLKQMYRSCA 309
             L+  C      +RP    V  +L+  Y    
Sbjct: 240 YDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 272

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (204), Expect = 5e-19
 Identities = 34/263 (12%), Positives = 76/263 (28%), Gaps = 28/263 (10%)

Query: 59  NYDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRC 114
           +Y+    I   S+    K       +  +   + + +         ++ +    ++ H  
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 115 FFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANA 172
             +     ++       +V EY   G LA  I        + + L     L++   +  A
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEEFVLRVMTQLTLA 121

Query: 173 IAYLH--VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARL 230
           +   H        V+ RD K +N+  + +   KL DF  +  +                +
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 181

Query: 231 N----EDDGYVALRD------------HVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQ 274
           +        Y    D             +   F      E+   +  G           +
Sbjct: 182 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 241

Query: 275 AYAHLIFECVNESPVDRPTMVDV 297
               +I   +N     RP++ ++
Sbjct: 242 LN-EIITRMLNLKDYHRPSVEEI 263

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 6e-19
 Identities = 44/303 (14%), Positives = 89/303 (29%), Gaps = 70/303 (23%)

Query: 63  EKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCC 122
           ++ I K  F  +++G  +   ++V  F + + R +      I     + H      I   
Sbjct: 8   QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAAD 66

Query: 123 LETQIPI----LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHV 178
            +         LV +Y   GSL D +            + +   +K+A   A+ +A+LH+
Sbjct: 67  NKDNGTWTQLWLVSDYHEHGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHM 118

Query: 179 GF-----PRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG----------------- 216
                     +  RD K  NIL  +     + D   ++                      
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178

Query: 217 -------------------------------ELLTGLRAFDLARLNEDDGY-VALRDHVK 244
                                          E+        +    +   Y +   D   
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238

Query: 245 KYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
           +   +    + + P I          + L+  A ++ EC   +   R T + + K L Q+
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSC---EALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295

Query: 305 YRS 307
            + 
Sbjct: 296 SQQ 298

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (198), Expect = 2e-18
 Identities = 52/268 (19%), Positives = 93/268 (34%), Gaps = 28/268 (10%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFK 117
           +     + I    F  ++ G+   +    +K         +  I       ++ H    +
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 118 LIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLH 177
           L G CLE     LVFE++  G L+D +R Q               L +  D+   +AYL 
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLE 118

Query: 178 VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT-----GLRAFDLARLNE 232
                 VI RD    N L  E  V K+ DF  +  + + +  +         +    +  
Sbjct: 119 ---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175

Query: 233 DDGYVALRD-------------HVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHL 279
              Y +  D               K  +E    +E+++ +  G R    +      Y  +
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY-QI 234

Query: 280 IFECVNESPVDRPTMVDVAKKLKQMYRS 307
           +  C  E P DRP    + ++L ++  S
Sbjct: 235 MNHCWKERPEDRPAFSRLLRQLAEIAES 262

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.1 bits (199), Expect = 3e-18
 Identities = 44/283 (15%), Positives = 97/283 (34%), Gaps = 34/283 (12%)

Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFD-ASKPRMYDCCINN 103
           E E+A       + + + SF  +Y+G  +       E  +++   + A+  R     +N 
Sbjct: 14  EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 73

Query: 104 IVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN---PQPQHEPLLLT 160
                +       +L+G   + Q  +++ E +  G L   +R         P   P  L+
Sbjct: 74  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 133

Query: 161 HRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
             +++A +IA+ +AYL+       + RD    N +  E+   K+ DF  +  I E +   
Sbjct: 134 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 190

Query: 221 GLRAFDLARLNEDDGYVALRDHVKKY-------------------FEEDRLNEIIDPLIM 261
                 L         +                            ++     +++  ++ 
Sbjct: 191 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 250

Query: 262 GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
           G       +        L+  C   +P  RP+ +++   +K+ 
Sbjct: 251 GGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 292

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.2 bits (200), Expect = 3e-18
 Identities = 43/258 (16%), Positives = 80/258 (31%), Gaps = 30/258 (11%)

Query: 60  YDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASK---PRMYDCCINNIVYASQMIHRC 114
           +   + I   SF  +Y         ++++ K   S       +   I  + +  ++ H  
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIA 174
             +  GC L      LV EY    +               +PL       +       +A
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEV-------HKKPLQEVEIAAVTHGALQGLA 129

Query: 175 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAF---DLARLN 231
           YLH      +I RD K  NIL +E  + KL DF  +  +       G   +   ++    
Sbjct: 130 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAM 186

Query: 232 EDDGYVALRD------------HVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHL 279
           ++  Y    D              K           +  +   +          + + + 
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246

Query: 280 IFECVNESPVDRPTMVDV 297
           +  C+ + P DRPT   +
Sbjct: 247 VDSCLQKIPQDRPTSEVL 264

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 6e-18
 Identities = 61/278 (21%), Positives = 89/278 (32%), Gaps = 35/278 (12%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQERL------ISVMKFDASKPRMYDCCINNIVYASQMI 111
           N+   + VI + +F  + K   ++        I  MK  ASK    D      V      
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ---------HEPLLLTHR 162
           H     L+G C       L  EY   G+L D +R     +              L     
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGL 222
           L  A D+A  + YL     +  I RD    NIL  E  VAK+ DF  S         T  
Sbjct: 130 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 186

Query: 223 R--AFDLARLNEDDGYVALRDHV--------------KKYFEEDRLNEIIDPLIMGDRSC 266
           R     +A  + +         V                 +      E+ + L  G R  
Sbjct: 187 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE 246

Query: 267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
                  + Y  L+ +C  E P +RP+   +   L +M
Sbjct: 247 KPLNCDDEVY-DLMRQCWREKPYERPSFAQILVSLNRM 283

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.2 bits (195), Expect = 9e-18
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 31/259 (11%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQE--RLISV---MKFDASKPRMYDCCINNIVYASQMIH 112
            +++  + + K  F  +Y    ++   ++++    K    K  +       +   S + H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 113 RCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANA 172
               +L G   +     L+ EY   G++   ++       +              ++ANA
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-------KLSKFDEQRTATYITELANA 118

Query: 173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT-----GLRAFDL 227
           ++Y H    + VI RD K  N+L       K+ DF +S+  P     T          ++
Sbjct: 119 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 175

Query: 228 ARLNEDD--------GYVALRDHVKKY-FEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAH 278
                 D        G +     V K  FE +   E    +   + +    +   +    
Sbjct: 176 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARD 233

Query: 279 LIFECVNESPVDRPTMVDV 297
           LI   +  +P  RP + +V
Sbjct: 234 LISRLLKHNPSQRPMLREV 252

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (196), Expect = 9e-18
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 57  TNNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRC 114
            + ++    +   +F  +YK   +E   L +    D       +  +  I   +   H  
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 70

Query: 115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIA 174
             KL+          ++ E+   G++   +     P  + +         + K   +A+ 
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ------IQVVCKQTLDALN 124

Query: 175 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           YLH      +I RD K  NILF  +   KL DF  S       
Sbjct: 125 YLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 164

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 9e-18
 Identities = 48/277 (17%), Positives = 89/277 (32%), Gaps = 38/277 (13%)

Query: 55  IATNNYDSEKVIMKRSFYTLYKGFCQERL-------ISVMKFD-ASKPRMYDCCINNIVY 106
           I   +    + +   SF  + +G             +  +K D  S+P   D  I  +  
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64

Query: 107 ASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
              + HR   +L G  L   +  +V E    GSL DR       +      LL    + A
Sbjct: 65  MHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDR------LRKHQGHFLLGTLSRYA 117

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFD 226
             +A  + YL     +  I RD    N+L    ++ K+ DF    ++P+ +    ++   
Sbjct: 118 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174

Query: 227 LARLNEDDGYVALRDHV--------------------KKYFEEDRLNEIIDPLIMGDRSC 266
                                                ++ +     ++I+  +       
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234

Query: 267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQ 303
              E   Q   +++ +C    P DRPT V +   L +
Sbjct: 235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 3e-17
 Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFCQERL-----------ISVMKFDASKPRMYDC 99
              E+  +     K + + +F  +                    + ++K DA++  + D 
Sbjct: 6   PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 65

Query: 100 CINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQH----- 154
                +      H+    L+G C +     ++ EY + G+L + ++ +  P  ++     
Sbjct: 66  ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 125

Query: 155 ----EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
               E L     +  A  +A  + YL     +  I RD    N+L  E+NV K+ DF  +
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLA 182

Query: 211 ISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKK-------------------YFEEDR 251
             I   +         L         +  R +  +                    +    
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 242

Query: 252 LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
           + E+   L  G R              ++ +C +  P  RPT   + + L ++
Sbjct: 243 VEELFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 8e-17
 Identities = 49/281 (17%), Positives = 96/281 (34%), Gaps = 37/281 (13%)

Query: 54  EIATNNYDSEKVIMKRSFYTLYKGFC------QERLISVMKFDAS-KPRMYDCCINNIVY 106
           EI  +    +KVI    F  +YKG        +E  +++    A    +     +     
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62

Query: 107 ASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
             Q  H    +L G   + +  +++ EY+  G+L   +R +           +   + + 
Sbjct: 63  MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE------FSVLQLVGML 116

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT------ 220
           + IA  + YL        + RD    NIL N   V K+ DF  S  + +    T      
Sbjct: 117 RGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG 173

Query: 221 ----GLRAFDLARLNEDDGYV----------ALRDHVKKYFEEDRLNEIIDPLIMGDRSC 266
                  A +     +                +  + ++ + E   +E++  +  G R  
Sbjct: 174 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP 233

Query: 267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
           +       A   L+ +C  +    RP   D+   L ++ R+
Sbjct: 234 T-PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 9e-17
 Identities = 37/273 (13%), Positives = 91/273 (33%), Gaps = 38/273 (13%)

Query: 63  EKVIMKRSFYTLYKGFC-----QERLISVMKFD-ASKPRMYDCCINNIVYASQMIHRCFF 116
            +VI +  F  +Y G       ++   +V   +  +        +   +      H    
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 117 KLIGCCLETQ-IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
            L+G CL ++  P++V  Y+  G L + IR + +     +       +     +A  + +
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD------LIGFGLQVAKGMKF 145

Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDG 235
           L     +  + RD    N + +E+   K+ DF  +  + + E  +           +   
Sbjct: 146 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 202

Query: 236 YVALRDHV---------------------KKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQ 274
             +L+                           + +    +I   L+ G R    +     
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 262

Query: 275 AYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
            Y  ++ +C +     RP+  ++  ++  ++ +
Sbjct: 263 LY-EVMLKCWHPKAEMRPSFSELVSRISAIFST 294

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 1e-16
 Identities = 46/277 (16%), Positives = 94/277 (33%), Gaps = 35/277 (12%)

Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFD-ASKPRMYDCCINNIV 105
           + EI     +  + I +  F  +++G           +++      +   + +  +   +
Sbjct: 1   DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60

Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
              Q  H    KLIG   E  + I + E    G L   ++++           L   +  
Sbjct: 61  TMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLD------LASLILY 113

Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRA- 224
           A  ++ A+AYL     +  + RD    N+L +  +  KL DF  S  + +       +  
Sbjct: 114 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 170

Query: 225 ---FDLARLNEDDGYVALRDHV--------------KKYFEEDRLNEIIDPLIMGDRSCS 267
                +A  + +         V               K F+  + N++I  +  G+R   
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 230

Query: 268 GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM 304
                   Y  L+ +C    P  RP   ++  +L  +
Sbjct: 231 PPNCPPTLY-SLMTKCWAYDPSRRPRFTELKAQLSTI 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 1e-16
 Identities = 46/273 (16%), Positives = 88/273 (32%), Gaps = 37/273 (13%)

Query: 60  YDSEKVIMKRSFYTLYKGFCQERLISVMKFDASK-------PRMYDCCINNIVYASQMIH 112
           +   KV+   +F T+YKG        V    A K       P+     ++     + + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 113 RCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANA 172
               +L+G CL + +  L+ + +  G L D +R   +             L     IA  
Sbjct: 71  PHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQY------LLNWCVQIAKG 123

Query: 173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNE 232
           + YL     R ++ RD    N+L       K+ DF  +  +   E         +     
Sbjct: 124 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180

Query: 233 DDGYVALRDHVKK-------------------YFEEDRLNEIIDPLIMGDRSCSGKEQQL 273
               +  R +  +                    ++    +EI   L  G+R        +
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI 240

Query: 274 QAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR 306
             Y  ++ +C       RP   ++  +  +M R
Sbjct: 241 DVY-MIMVKCWMIDADSRPKFRELIIEFSKMAR 272

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 74.3 bits (182), Expect = 5e-16
 Identities = 44/274 (16%), Positives = 86/274 (31%), Gaps = 45/274 (16%)

Query: 59  NYDSEKVIMKRSFYTLYKGFCQE----------RLISVMKFDASKPRMYDCCINNIVYAS 108
           NY+ ++++ +     + +   +            +     F A + +         V   
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 109 QMI--HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
           + +  H    +L           LVF+ +  G L D +        +   L      KI 
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-------EKVTLSEKETRKIM 116

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT------ 220
           + +   I  LH      ++ RD K  NIL +++   KL DF FS  +  GE L       
Sbjct: 117 RALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP 173

Query: 221 GLRAFDLARLNEDDGYVALRDHVKKY---------------FEEDRLNEIIDPLIMGDRS 265
              A ++   + +D +      V  +               F   +   ++  ++ G+  
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 233

Query: 266 CSGKEQQL--QAYAHLIFECVNESPVDRPTMVDV 297
               E          L+   +   P  R T  + 
Sbjct: 234 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 7e-16
 Identities = 45/270 (16%), Positives = 83/270 (30%), Gaps = 43/270 (15%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASK-PRMYDCCINNIVYASQMIHRC 114
            ++D  + + + ++  +     +     ++V   D  +     +     I     + H  
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIA 174
             K  G   E  I  L  EY + G L DRI            +      +    +   + 
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIE-------PDIGMPEPDAQRFFHQLMAGVV 117

Query: 175 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDD 234
           YLH      +  RD K  N+L +E +  K+ DF  +           L            
Sbjct: 118 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL----- 169

Query: 235 GYVA---LRDHVKKYFEEDR--LNEIIDPLIMGDRSCSGKEQQLQAYAH----------- 278
            YVA   L+         D      ++  ++ G+          Q Y+            
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 229

Query: 279 ---------LIFECVNESPVDRPTMVDVAK 299
                    L+ + + E+P  R T+ D+ K
Sbjct: 230 KKIDSAPLALLHKILVENPSARITIPDIKK 259

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 74.0 bits (181), Expect = 1e-15
 Identities = 24/164 (14%), Positives = 61/164 (37%), Gaps = 13/164 (7%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
           ++YD  + +   +F  +++   +      +            +     I   S + H   
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
             L     +    ++++E+++ G L +++  +HN   + E       ++  + +   + +
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDE------AVEYMRQVCKGLCH 139

Query: 176 LHVGFPRPVIFRDFKLSNILFN--EENVAKLFDFSFSISIPEGE 217
           +H       +  D K  NI+F     N  KL DF  +  +   +
Sbjct: 140 MH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 180

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 1e-15
 Identities = 37/282 (13%), Positives = 76/282 (26%), Gaps = 73/282 (25%)

Query: 60  YDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
              +  I + SF T+YKG       E     ++                     + H   
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 116 FKLIGCCLET----QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
            +       T    +  +LV E +  G+L   ++       + + + +       + I  
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-------RFKVMKIKVLRSWCRQILK 123

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSISIPEG-------------- 216
            + +LH   P P+I RD K  NI         K+ D   +                    
Sbjct: 124 GLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAP 182

Query: 217 ---------------------ELLTGLRAFDLARLNEDDGYVALRDHVKKYFEEDRLNEI 255
                                E+ T    +      E      +   V    +    +++
Sbjct: 183 EMYEEKYDESVDVYAFGMCMLEMATSEYPYS-----ECQNAAQIYRRVTSGVKPASFDKV 237

Query: 256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDV 297
             P +                  +I  C+ ++  +R ++ D+
Sbjct: 238 AIPEV----------------KEIIEGCIRQNKDERYSIKDL 263

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 1e-15
 Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 13/159 (8%)

Query: 57  TNNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRC 114
              Y   + I + +  T+Y        + +++ + +  +    +  IN I+   +  +  
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIA 174
               +   L      +V EY+  GSL D +      + Q           + ++   A+ 
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ--------IAAVCRECLQALE 130

Query: 175 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
           +LH      VI RD K  NIL   +   KL DF F   I
Sbjct: 131 FLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 70.5 bits (172), Expect = 2e-14
 Identities = 27/166 (16%), Positives = 62/166 (37%), Gaps = 13/166 (7%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
           + YD  + +   +F  +++   +   R+      +   P       N I   +Q+ H   
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
             L     +    +L+ E+++ G L DRI  +     + E       +   +     + +
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE------VINYMRQACEGLKH 142

Query: 176 LHVGFPRPVIFRDFKLSNILF--NEENVAKLFDFSFSISIPEGELL 219
           +H      ++  D K  NI+    + +  K+ DF  +  +   E++
Sbjct: 143 MH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 70.1 bits (171), Expect = 3e-14
 Identities = 24/169 (14%), Positives = 55/169 (32%), Gaps = 18/169 (10%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMI-- 111
           N++   ++I +  F  +Y        +   +  +     K +  +    N      ++  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 112 --HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
                   +            + + +N G L   +        QH           A +I
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-------QHGVFSEADMRFYAAEI 116

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL 218
              + ++H    R V++RD K +NIL +E    ++ D   +    + + 
Sbjct: 117 ILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 162

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 4e-14
 Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 59  NYDSEKVIMKRSFYTLYKGFC----QERLISVMKFD-ASKPRMYDCCINNIVYASQMIHR 113
           ++   K++ + SF T+         +E  I +++     K              S++ H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
            F KL     + +       Y   G L   I        +      T       +I +A+
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-------RKIGSFDETCTRFYTAEIVSAL 121

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            YLH    + +I RD K  NIL NE+   ++ DF  +
Sbjct: 122 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 155

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.1 bits (158), Expect = 1e-12
 Identities = 28/173 (16%), Positives = 59/173 (34%), Gaps = 10/173 (5%)

Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINN-IVYA 107
           K+ E   + YD   V+   +F  +     +   +L+++           +  + N I   
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
            ++ H     L           L+ + ++ G L DRI        +          ++  
Sbjct: 62  HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-------EKGFYTERDASRLIF 114

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
            + +A+ YLH         +   L     +E++   + DF  S     G +L+
Sbjct: 115 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 167

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 5e-12
 Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 15/173 (8%)

Query: 51  KELEIATNNYDSEKVIMKRSFYTLYKGFCQE-RLISVMKFDASKPRMYDCCINNIVYASQ 109
           KEL      Y   + + +  F  +++      +   + KF   K          I   + 
Sbjct: 1   KEL---YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNI 57

Query: 110 MIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
             HR    L       +  +++FE+I+   + +RI        + E       +     +
Sbjct: 58  ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNERE------IVSYVHQV 111

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILF--NEENVAKLFDFSFSISIPEGELLT 220
             A+ +LH      +   D +  NI++     +  K+ +F  +  +  G+   
Sbjct: 112 CEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 1e-11
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 16/166 (9%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFD-ASKPRMYDCCINNI-VYASQMI 111
            ++   K++ K SF  ++        Q   I  +K D        +C +    V +    
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
           H     +       +    V EY+N G L   I+             L+     A +I  
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-------SCHKFDLSRATFYAAEIIL 114

Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            + +LH    + +++RD KL NIL +++   K+ DF        G+
Sbjct: 115 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 157

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.1 bits (145), Expect = 5e-11
 Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 15/163 (9%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFD-ASKPRMYDCCINNIVYASQMIH 112
            ++   + +   SF  ++        +   + V+K +   + +  +   +  +  S + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 113 RCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANA 172
               ++ G   + Q   ++ +YI  G L   +R                    A ++  A
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV-------AKFYAAEVCLA 116

Query: 173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 215
           + YLH    + +I+RD K  NIL ++    K+ DF F+  +P+
Sbjct: 117 LEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 156

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 59.8 bits (144), Expect = 6e-11
 Identities = 29/170 (17%), Positives = 65/170 (38%), Gaps = 19/170 (11%)

Query: 57  TNNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFD-ASKPRMYDCCINNIVYASQMI 111
           ++ Y+  +++       ++        ++  + V++ D A  P  Y         A+ + 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 112 HRCFFKLIGCCLET----QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
           H     +            +P +V EY++  +L D +           P+     +++  
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-------TEGPMTPKRAIEVIA 118

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           D   A+ + H      +I RD K +NI+ +  N  K+ DF  + +I +  
Sbjct: 119 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 165

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.7 bits (141), Expect = 1e-10
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC---QERLISVMKFDASKPRMYDCCINNIVYASQMIHRC 114
             Y   + I + ++  +YK      +   +  ++ +     +    I  I    ++ H  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIA 174
             KL       +  +LVFE+++                    L           + N IA
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV-------CEGGLESVTAKSFLLQLLNGIA 114

Query: 175 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           Y H    R V+ RD K  N+L N E   K+ DF  + +     
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-10
 Identities = 29/160 (18%), Positives = 51/160 (31%), Gaps = 17/160 (10%)

Query: 64  KVIMKRSFYTLYKGFCQE-------RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
             + +  F T+YK   +        + I +     +K  +    +  I    ++ H    
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL 176
            L+          LVF+++                P H                  + YL
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH-------IKAYMLMTLQGLEYL 116

Query: 177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
           H      ++ RD K +N+L +E  V KL DF  + S    
Sbjct: 117 H---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 153

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.9 bits (139), Expect = 3e-10
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 17/188 (9%)

Query: 28  ESVLKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQE--RLIS 85
           ESV + L +A       + T S    ++  + +D  K +   SF  +     +E     +
Sbjct: 13  ESVKEFLAKAKEDFLKKWETPSQNTAQL--DQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70

Query: 86  VMKFD---ASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLAD 142
           +   D     K +  +  +N       +      KL     +     +V EY+  G +  
Sbjct: 71  MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130

Query: 143 RIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA 202
            +        +       H    A  I     YLH      +I+RD K  N+L +++   
Sbjct: 131 HL-------RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180

Query: 203 KLFDFSFS 210
           ++ DF F+
Sbjct: 181 QVTDFGFA 188

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 56.4 bits (135), Expect = 9e-10
 Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 20/165 (12%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
           ++Y   + + +  +  +++         + V      K +     I   +  +       
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENLRGGPNI 92

Query: 116 FKLIGCCLE--TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
             L     +  ++ P LVFE++N        +           L          +I  A+
Sbjct: 93  ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----------TLTDYDIRFYMYEILKAL 142

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSISIPEGE 217
            Y H      ++ RD K  N++ + E+   +L D+  +     G+
Sbjct: 143 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 184

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 1e-09
 Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 44/218 (20%)

Query: 112 HRCFFKLIGCC----LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
                +++          +  ++V E ++ G L  RI+ + +     +        +I K
Sbjct: 64  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-----QAFTEREASEIMK 118

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN---VAKLFDFSFSISIPEG-------- 216
            I  AI YLH      +  RD K  N+L+  +    + KL DF F+              
Sbjct: 119 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 175

Query: 217 -------ELLTGLR---AFDLARLNEDDGYVALRDHVKKY-FEEDRLNEIIDPLIMGDRS 265
                  E+L   +   + D+  L    G +          F  +    I   +    R 
Sbjct: 176 TPYYVAPEVLGPEKYDKSCDMWSL----GVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 231

Query: 266 CSGKEQQL------QAYAHLIFECVNESPVDRPTMVDV 297
              +          +    LI   +   P  R T+ + 
Sbjct: 232 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 269

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-09
 Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 15/166 (9%)

Query: 55  IATNNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFD-ASKPRMYDCCINNIVYASQ 109
           +  N++D  K++ K +F  +         +   + +++ +           +        
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61

Query: 110 MIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
             H     L            V EY N G L   +        +              +I
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-------RERVFTEERARFYGAEI 114

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 215
            +A+ YLH    R V++RD KL N++ +++   K+ DF        
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 2e-09
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 20/168 (11%)

Query: 59  NYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
           +Y   KVI   SF  +Y+    +   L+++ K    K          +    ++ H    
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIV 76

Query: 117 KLIGCCLETQIP------ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
           +L      +          LV +Y+         R+  +     + L + +       + 
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVY----RVARHYSRAKQTLPVIYVKLYMYQLF 132

Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSISIPEGE 217
            ++AY+H      +  RD K  N+L + +  V KL DF  +  +  GE
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 2e-09
 Identities = 40/266 (15%), Positives = 74/266 (27%), Gaps = 43/266 (16%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFDASKPRMYDCCIN--------NIVYA 107
           + Y    ++    F ++Y G        +++   +  +   +    N         ++  
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
                    +L+         +L+ E             +     +              
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFFW 117

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSISIPEG---------- 216
            +  A+ + H      V+ RD K  NIL +      KL DF     + +           
Sbjct: 118 QVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 174

Query: 217 ----ELLTGLRAFDLARLNEDDGYVALRDHVKKY-FEEDRLNEIIDPLIMGDRSCSGKEQ 271
               E +   R    +      G +          FE D   EII   +   +  S    
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--EEIIRGQVFFRQRVS---- 228

Query: 272 QLQAYAHLIFECVNESPVDRPTMVDV 297
                 HLI  C+   P DRPT  ++
Sbjct: 229 --SECQHLIRWCLALRPSDRPTFEEI 252

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (129), Expect = 4e-09
 Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHR 113
             Y+  + I + ++ T++K       +   +  ++ D     +    +  I    ++ H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
              +L       +   LVFE+ +            +  P+               +   +
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI-------VKSFLFQLLKGL 114

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
            + H    R V+ RD K  N+L N     KL +F  +
Sbjct: 115 GFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLA 148

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 4e-09
 Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 59  NYDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHRC 114
           N+   + I + ++  +YK       +   +  ++ D     +    I  I    ++ H  
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 115 FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIA 174
             KL+          LVFE+++               P                +   +A
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL------IKSYLFQLLQGLA 116

Query: 175 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
           + H      V+ RD K  N+L N E   KL DF  + +     
Sbjct: 117 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 5e-09
 Identities = 35/292 (11%), Positives = 79/292 (27%), Gaps = 56/292 (19%)

Query: 56  ATNNYDSEKVIMKRSFYTLYKGFCQERL-----ISVMKFDASKPRMYDCCINNIV---YA 107
           A   Y+    I + ++  ++K    +       +  ++    +  M    I  +    + 
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
               H    +L   C  ++        +    + D+    +  +     +       +  
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 123

Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG----------- 216
            +   + +LH      V+ RD K  NIL       KL DF  +                 
Sbjct: 124 QLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 180

Query: 217 --------------------------ELLTGLRAFDLARLNEDDGYVALRDHVKKYFEED 250
                                     E+      F     ++ D    + D +    EED
Sbjct: 181 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR--GSSDVDQLGKILDVIGLPGEED 238

Query: 251 RLNEIIDPLIMGDRSCSGKEQQL-----QAYAHLIFECVNESPVDRPTMVDV 297
              ++  P        +   ++      +    L+ +C+  +P  R +    
Sbjct: 239 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 5e-09
 Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 22/172 (12%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHR 113
           + Y+    I + +F  ++K       Q+  +  +  +  K       +  I     + H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 114 CFFKLIGCCLETQIPI--------LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
               LI  C     P         LVF++           +                 ++
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-------IKRV 122

Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
            + + N    L+      ++ RD K +N+L   + V KL DF  + +    +
Sbjct: 123 MQMLLNG---LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 171

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 7e-09
 Identities = 23/168 (13%), Positives = 49/168 (29%), Gaps = 18/168 (10%)

Query: 57  TNNYDSEKVIMKRSFYTLYKGFCQE--RLISVMKFD-ASKPRMYDCCINNIVYASQMIHR 113
              Y +   I + ++  +   +       +++ K             +  I    +  H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 114 CFFKLIGCC----LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
               +        +E    + +  ++    L   ++         + L   H       I
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK--------TQHLSNDHICYFLYQI 118

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              + Y+H      V+ RD K SN+L N     K+ DF  +       
Sbjct: 119 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 2e-08
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 22/175 (12%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFCQE--------RLISVMKFDASKPRMYDCCINNIVYASQ 109
           + YD+ + +    F  + K   +          +       + +    +     +    +
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 110 MIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
           + H     L          IL+ E +  G L D          + E L      +  K I
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELFD-------FLAEKESLTEEEATEFLKQI 122

Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA----KLFDFSFSISIPEGELLT 220
            N + YLH      +   D K  NI+  + NV     K+ DF  +  I  G    
Sbjct: 123 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 1e-07
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 20/173 (11%)

Query: 55  IATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFD--ASKPRMYDCCINNIV 105
           +   N++  KV+   ++  ++           +   + V+K      K +  +       
Sbjct: 21  VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 80

Query: 106 YASQMIHRCFF-KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
               +    F   L           L+ +YIN G L   +        Q E         
Sbjct: 81  VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS-------QRERFTEHEVQI 133

Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
              +I  A+ +LH      +I+RD KL NIL +      L DF  S      E
Sbjct: 134 YVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 183

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.3 bits (114), Expect = 4e-07
 Identities = 43/293 (14%), Positives = 78/293 (26%), Gaps = 52/293 (17%)

Query: 52  ELEIATNNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYA 107
           EL +  N Y   + I   SF  +Y G      +E  I +       P+++          
Sbjct: 2   ELRVG-NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH----IESKIY 56

Query: 108 SQMIHRCFFKLIG-CCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
             M        I  C  E    ++V E +                       L   L +A
Sbjct: 57  KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF-------CSRKFSLKTVLLLA 109

Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL---FDFSFSISIPEGELLTGLR 223
             + + I Y+H    +  I RD K  N L        L    DF  +    +      + 
Sbjct: 110 DQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP 166

Query: 224 AFDLARLNEDDGYVALRDHVKKYF-----------------------------EEDRLNE 254
             +   L     Y ++  H+                                  + +  E
Sbjct: 167 YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE 226

Query: 255 IIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
            I    M        +     +A  +  C +    D+P    + +  + ++  
Sbjct: 227 RISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 45.6 bits (107), Expect = 3e-06
 Identities = 30/264 (11%), Positives = 76/264 (28%), Gaps = 26/264 (9%)

Query: 58  NNYDSEKVIMKRSFYTLYKGFC----QERLISVMKFDASKPRMYDCCINNIVYASQMIHR 113
            +Y   + I + SF  +++G      Q+  I      +  P++     +       +   
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQL----RDEYRTYKLLAGC 60

Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
                +    +  +  ++   +   SL D + +                   AK +   +
Sbjct: 61  TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT------VAMAAKQMLARV 114

Query: 174 AYLHVGFPRPVIFRDFKLSNILFNE-----ENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
             +H    + +++RD K  N L         N+  + DF       +      +   +  
Sbjct: 115 QSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 171

Query: 229 RLNEDDGYVALRDHVKKYFEED----RLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECV 284
            L+    Y+++  H+ +          L  +    + G     G +       +      
Sbjct: 172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 231

Query: 285 NESPVDRPTMVDVAKKLKQMYRSC 308
            +S   R       ++  +     
Sbjct: 232 KQSTPLRELCAGFPEEFYKYMHYA 255

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 26/199 (13%), Positives = 63/199 (31%), Gaps = 22/199 (11%)

Query: 64  KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL 123
           K++ +     ++  + ++    V+KF     ++       +          F  L     
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKF----HKVGHTSFKKVKEKRDYGDLHFSVLAIRSA 61

Query: 124 ETQIPIL-----VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHV 178
             +   L     +          + + ++     +   + + +  ++   I   +A  + 
Sbjct: 62  RNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY- 120

Query: 179 GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
              R ++  D    N+L +EE +  + DF  S+ + E      L           D    
Sbjct: 121 --HRGIVHGDLSQYNVLVSEEGI-WIIDFPQSVEVGEEGWREILER---------DVRNI 168

Query: 239 LRDHVKKYFEEDRLNEIID 257
           +    + Y  E  +N  ID
Sbjct: 169 ITYFSRTYRTEKDINSAID 187

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (87), Expect = 8e-04
 Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 4/98 (4%)

Query: 103 NIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR 162
           +      M      KL+          +    +      + + +    + +  PL   + 
Sbjct: 70  DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPL--IYV 127

Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN 200
            +I+K +   + Y+H      +I  D K  N+L    +
Sbjct: 128 KQISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVD 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	309
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.95
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.32
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.27
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.45
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.35
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.31
d1cjaa_	342	Actin-fragmin kinase, catalytic domain {Physarum p	90.48

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-49  Score=335.64  Aligned_cols=239  Identities=20%  Similarity=0.279  Sum_probs=188.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      ++|+..+.||+|+||+||+|.+ +++.||||++.... ...++|.+|+.++.+++|||||+++|+|.+++..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            5678888999999999999999 78899999997654 345779999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++.      .....+++..++.++.|||.||.|||   +.+|+||||||+|||+++++++||+|||+|+.....
T Consensus        84 ~g~L~~~l~------~~~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  154 (263)
T d1sm2a_          84 HGCLSDYLR------TQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  154 (263)
T ss_dssp             TCBHHHHHH------TTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC--------
T ss_pred             CCcHHHHhh------ccccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCC
Confidence            999999986      23467899999999999999999999   899999999999999999999999999999876443


Q ss_pred             c-----cccccccccccccccC------CCcccHHHHHHHHhhc-cc------ccccccccccCCCCCCchHHHHHHHHH
Q 045682          217 E-----LLTGLRAFDLARLNED------DGYVALRDHVKKYFEE-DR------LNEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       217 ~-----~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      .     ...|...|.+|+....      .+.|+++..+|+++.. ..      ..+++..+..+..+.. +..+++++.+
T Consensus       155 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~-p~~~~~~l~~  233 (263)
T d1sm2a_         155 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-PRLASTHVYQ  233 (263)
T ss_dssp             ----------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC-CTTSCHHHHH
T ss_pred             CceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC-ccccCHHHHH
Confidence            2     2345556666665433      3556666666766543 22      2234444444444333 3366788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          279 LIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      |+.+||+.||++||||++|++.|+++.++
T Consensus       234 li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         234 IMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999865

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-49  Score=342.18  Aligned_cols=247  Identities=16%  Similarity=0.246  Sum_probs=197.6

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCc
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI  127 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  127 (309)
                      +++|+...++|+..+.||+|+||+||+|++  +++.||||++.... ...++|.+|+.+|++++|||||+++|+|.+++.
T Consensus         9 ~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (287)
T d1opja_           9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   87 (287)
T ss_dssp             CCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCe
Confidence            345666677899999999999999999999  68999999987654 345789999999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .++||||+++|+|.+++...     ....+++..+..++.|||.||+|||   +++|+||||||+|||++.++++||+||
T Consensus        88 ~~iv~E~~~~g~l~~~l~~~-----~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DF  159 (287)
T d1opja_          88 FYIITEFMTYGNLLDYLREC-----NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADF  159 (287)
T ss_dssp             CEEEEECCTTCBHHHHHHHS-----CTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             eEEEeecccCcchHHHhhhc-----cccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccc
Confidence            99999999999999998632     4568999999999999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCcc-----ccccccccccccccC------CCcccHHHHHHHHhhcc-c------ccccccccccCCCCCCch
Q 045682          208 SFSISIPEGEL-----LTGLRAFDLARLNED------DGYVALRDHVKKYFEED-R------LNEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       208 g~a~~~~~~~~-----~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~g~~~~~~~  269 (309)
                      |+|+....+..     ..|..++.+|+....      .+.|+++..+|+++.+. .      ..++...+..+ ..+..+
T Consensus       160 G~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~~~~~~  238 (287)
T d1opja_         160 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERP  238 (287)
T ss_dssp             CCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCCCCC
T ss_pred             cceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-CCCCCC
Confidence            99987755432     234555556654332      34566666666665432 2      12222222223 333334


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ..+++++.+|+.+||+.||++|||+.+|++.|+.+.+
T Consensus       239 ~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         239 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            4677899999999999999999999999999988754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-48  Score=337.79  Aligned_cols=240  Identities=17%  Similarity=0.230  Sum_probs=182.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CC---eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QE---RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...++||+|+||+||+|.+  ++   ..||||.+.... ....+.|.+|+.+|++++|||||+++|++.+++..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            3455567899999999999998  33   368999987653 34557799999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++.      .....+++.+++.++.|||.||.|||   +.+|+||||||+||||+.++++||+|||+|+
T Consensus       106 ~Ey~~~g~L~~~~~------~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~  176 (299)
T d1jpaa_         106 TEFMENGSLDSFLR------QNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSR  176 (299)
T ss_dssp             EECCTTEEHHHHHH------TTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             EEecCCCcceeeec------cccCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccce
Confidence            99999999999986      23457999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCcc---------cccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCch
Q 045682          212 SIPEGEL---------LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       212 ~~~~~~~---------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~  269 (309)
                      .......         ..|...|.+|+...      ..+.|+++..+|+++. +..      ..+++..+..+..++ .+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~-~~  255 (299)
T d1jpaa_         177 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP-PP  255 (299)
T ss_dssp             -------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-CC
T ss_pred             EccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-CC
Confidence            7654321         12334455554332      2356777777777664 221      223444444444433 33


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ..++.++.+|+.+||+.||++||||.+|++.|+++.++
T Consensus       256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            46788999999999999999999999999999998754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-49  Score=336.66  Aligned_cols=246  Identities=19%  Similarity=0.277  Sum_probs=196.1

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++|+...++|...+.||+|+||.||+|.+ +++.||||++.... ...+.|.+|+.++.+++|||||+++|++.+ +..+
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~   83 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIY   83 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeE
Confidence            34555567888899999999999999999 67899999997654 345779999999999999999999998865 5679


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|+|.+++...     ....+++..++.++.|||.||.|||   +.+|+||||||+||||++++.+||+|||+
T Consensus        84 iv~Ey~~~g~L~~~~~~~-----~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGl  155 (272)
T d1qpca_          84 IITEYMENGSLVDFLKTP-----SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGL  155 (272)
T ss_dssp             EEEECCTTCBHHHHTTSH-----HHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEeCCCCcHHHHHhhc-----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccc
Confidence            999999999999987522     2346999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhhc-cc------ccccccccccCCCCCCchHH
Q 045682          210 SISIPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEE-DR------LNEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~g~~~~~~~~~  271 (309)
                      |+......     ...|...|.+|+...      ..+.|+++..+|+++.+ ..      ..+++..+..+..+.. +..
T Consensus       156 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~-p~~  234 (272)
T d1qpca_         156 ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDN  234 (272)
T ss_dssp             CEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTT
T ss_pred             eEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-ccc
Confidence            98876543     234555566665432      23556666677766643 22      2233344444443333 346


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +++++.+|+.+||+.||++||||.+|++.|+++..+
T Consensus       235 ~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            778899999999999999999999999999998765

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-48  Score=334.66  Aligned_cols=245  Identities=20%  Similarity=0.265  Sum_probs=192.0

Q ss_pred             HHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           53 LEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        53 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      |+...++|...+.||+|+||+||+|++.+ .||||++...  .....+.|.+|+.++.+++|||||+++|++.+ +..++
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~l   80 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAI   80 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEE
Confidence            34456789999999999999999999865 4999998654  34556789999999999999999999998765 56899


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+++|+|.+++..      ....+++..+..++.|||.||+|||   +++||||||||+|||++.++.+||+|||+|
T Consensus        81 v~Ey~~~g~L~~~l~~------~~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla  151 (276)
T d1uwha_          81 VTQWCEGSSLYHHLHI------IETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA  151 (276)
T ss_dssp             EEECCCEEEHHHHHHT------SCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCS
T ss_pred             EEecCCCCCHHHHHhh------ccCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccce
Confidence            9999999999999851      3457999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCc------ccccccccccccccc---------CCCcccHHHHHHHHhhccccc-------ccccccccCCCCCC-
Q 045682          211 ISIPEGE------LLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDRLN-------EIIDPLIMGDRSCS-  267 (309)
Q Consensus       211 ~~~~~~~------~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~-  267 (309)
                      +......      ...|...|.+|+...         ..+.|+++..+|+++.+....       .+......+..++. 
T Consensus       152 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~  231 (276)
T d1uwha_         152 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL  231 (276)
T ss_dssp             CC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCG
T ss_pred             eeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcc
Confidence            7764321      345677777777532         124566677777776544321       11122222322221 


Q ss_pred             --chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          268 --GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       268 --~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                        .+..+++++.+|+.+||+.||++||||.+|++.|+.+.+++
T Consensus       232 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~  274 (276)
T d1uwha_         232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL  274 (276)
T ss_dssp             GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence              22356788999999999999999999999999999998764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-47  Score=328.74  Aligned_cols=240  Identities=15%  Similarity=0.217  Sum_probs=190.6

Q ss_pred             cCCCccCc-eeecCCeEEEEEEe----CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKV-IMKRSFYTLYKGFC----QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~-lg~G~~g~V~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|...+. ||+|+||+||+|.+    ++..||||.+.... ....+.|.+|+.+|++++|||||+++|++.+ +..++|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            44555664 99999999999987    34579999997654 3455789999999999999999999999865 468999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++.      .....+++..+..++.|||.||+|||   +++|+||||||+|||++.++.+||+|||+|+
T Consensus        87 mE~~~~g~L~~~l~------~~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~  157 (285)
T d1u59a_          87 MEMAGGGPLHKFLV------GKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSK  157 (285)
T ss_dssp             EECCTTEEHHHHHT------TCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             EEeCCCCcHHHHhh------ccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhh
Confidence            99999999999975      23467999999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCc-------ccccccccccccccc------CCCcccHHHHHHHHhh-cc------cccccccccccCCCCCCchHH
Q 045682          212 SIPEGE-------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       212 ~~~~~~-------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~~~~~~~~~  271 (309)
                      ......       ..+|...+.+|+...      ..+.|+++..+|+++. +.      ...+++..+..|..+.. +..
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~-p~~  236 (285)
T d1u59a_         158 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC-PPE  236 (285)
T ss_dssp             ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCC-CTT
T ss_pred             cccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CCc
Confidence            765432       233445565555422      2356777777777654 22      22334444555554433 346


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      +++++.+|+.+||+.||++||||.+|++.|+.+..++
T Consensus       237 ~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            7889999999999999999999999999999887653

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=325.58  Aligned_cols=232  Identities=18%  Similarity=0.208  Sum_probs=182.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|+..+.||+|+||+||+|++  +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            5688899999999999999998  78999999987653 23345689999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +++|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||+++++.+||+|||+|+...
T Consensus        85 ~~gg~L~~~l~-------~~~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~  154 (271)
T d1nvra_          85 CSGGELFDRIE-------PDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR  154 (271)
T ss_dssp             CTTEEGGGGSB-------TTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred             cCCCcHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeec
Confidence            99999999986       5678999999999999999999999   8999999999999999999999999999998763


Q ss_pred             CC------ccccccccccccccccCCCcccHHHHHHHH-------hhccccc-------ccccccccCCCCCCchHHHHH
Q 045682          215 EG------ELLTGLRAFDLARLNEDDGYVALRDHVKKY-------FEEDRLN-------EIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       215 ~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      .+      ....|+..|.+|+......+.+...++|++       +.+....       ...................++
T Consensus       155 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  234 (271)
T d1nvra_         155 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS  234 (271)
T ss_dssp             ETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCH
T ss_pred             cCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCH
Confidence            32      234578888888765544444445555543       3332211       011111111222222335578


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+|+.+||+.||++|||+.|+++
T Consensus       235 ~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         235 APLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhc
Confidence            8999999999999999999999864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-47  Score=324.39  Aligned_cols=232  Identities=18%  Similarity=0.257  Sum_probs=184.3

Q ss_pred             CceeecCCeEEEEEEe----CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEeccC
Q 045682           64 KVIMKRSFYTLYKGFC----QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINC  137 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  137 (309)
                      +.||+|+||+||+|.+    .++.||||++...  .....+.|.+|+.+|++++|||||+++|+|.+ +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            4699999999999987    2468999998654  33445789999999999999999999999865 457899999999


Q ss_pred             CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCCc
Q 045682          138 GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE  217 (309)
Q Consensus       138 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  217 (309)
                      |+|.+++.       ....+++..++.++.|||.||+|||   +.+|+||||||+|||++.++.+||+|||+|+......
T Consensus        92 g~L~~~l~-------~~~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~  161 (277)
T d1xbba_          92 GPLNKYLQ-------QNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  161 (277)
T ss_dssp             EEHHHHHH-------HCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             CcHHHHHh-------hccCCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccc
Confidence            99999987       5567999999999999999999999   8999999999999999999999999999998764432


Q ss_pred             -------ccccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCchHHHHHHHH
Q 045682          218 -------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       218 -------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                             ...|+..|.+|+...      ..+.|+++..+|+++. +..      ..++...+..|..+.. +..++.++.
T Consensus       162 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~-p~~~~~~~~  240 (277)
T d1xbba_         162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC-PAGCPREMY  240 (277)
T ss_dssp             SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTTCCHHHH
T ss_pred             cccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCC-CcccCHHHH
Confidence                   234555566665432      3356677777777654 221      2233444444544433 346788999


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          278 HLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +|+.+||+.||++|||+.+|++.|+....+
T Consensus       241 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         241 DLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence            999999999999999999999999987654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-47  Score=320.08  Aligned_cols=235  Identities=17%  Similarity=0.247  Sum_probs=190.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEecc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN  136 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  136 (309)
                      ++|+..+.||+|+||+||+|++ +++.||||.++... ...++|.+|+.++.+++||||++++|+|.+++..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            6788999999999999999999 77899999997654 345789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCCC
Q 045682          137 CGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG  216 (309)
Q Consensus       137 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  216 (309)
                      +|+|.+++.      .....+++..+.+++.|+|+||+|||   +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus        83 ~g~l~~~~~------~~~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~  153 (258)
T d1k2pa_          83 NGCLLNYLR------EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  153 (258)
T ss_dssp             TEEHHHHHH------SGGGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSS
T ss_pred             CCcHHHhhh------ccccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCC
Confidence            999999975      24567899999999999999999999   899999999999999999999999999999876544


Q ss_pred             cc-----cccccccccccccc------CCCcccHHHHHHHHhh-cc------cccccccccccCCCCCCchHHHHHHHHH
Q 045682          217 EL-----LTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       217 ~~-----~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      ..     ..|...|.+|+...      ..+.|+++..+|+++. +.      ...++...+..+..+. .+..+++++.+
T Consensus       154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~-~p~~~~~~l~~  232 (258)
T d1k2pa_         154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY-RPHLASEKVYT  232 (258)
T ss_dssp             SCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC-CCTTCCHHHHH
T ss_pred             CceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC-CcccccHHHHH
Confidence            32     22334444444332      2345666666666653 22      2233444454454433 34467789999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAKKLKQ  303 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~~L~~  303 (309)
                      |+.+||+.||++|||+.+|++.|.+
T Consensus       233 li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         233 IMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHccCCHhHCcCHHHHHHHhhC
Confidence            9999999999999999999998864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=324.03  Aligned_cols=240  Identities=18%  Similarity=0.237  Sum_probs=186.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CC----eEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QE----RLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      +.|+..++||+|+||.||+|.+  ++    ..||||++.... ......|.+|+.++++++|||||+++|++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            4577888999999999999998  22    479999997653 3344679999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ||||+.+|++.+++..      ....+++.++..++.|||.||.|||   +.+|+||||||+||||+.++.+||+|||+|
T Consensus        87 v~e~~~~~~l~~~~~~------~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla  157 (283)
T d1mqba_          87 ITEYMENGALDKFLRE------KDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLS  157 (283)
T ss_dssp             EEECCTTEEHHHHHHH------TTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             EEEecccCcchhhhhc------ccccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchh
Confidence            9999999999998752      3467999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCc-------cccccccccccccccC------CCcccHHHHHHHHhhc-cc------ccccccccccCCCCCCchH
Q 045682          211 ISIPEGE-------LLTGLRAFDLARLNED------DGYVALRDHVKKYFEE-DR------LNEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       211 ~~~~~~~-------~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~g~~~~~~~~  270 (309)
                      +......       ...|...|.+|+....      .+.|+++..+|+++.. ..      ..+++..+..+..+. .+.
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~-~~~  236 (283)
T d1mqba_         158 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP-TPM  236 (283)
T ss_dssp             ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-CCT
T ss_pred             hcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCC-Cch
Confidence            8764432       1234555666664332      3456666667766542 22      223444444444333 334


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .++.++.+|+.+||+.||++||||.+|++.|+.+.++
T Consensus       237 ~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         237 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            6778899999999999999999999999999988653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-47  Score=329.84  Aligned_cols=232  Identities=19%  Similarity=0.244  Sum_probs=193.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ..|+..+.||+|+||+||+|++  +++.||||++....   ....+.+.+|+.+|++++|||||++++++.+++..++||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            3488889999999999999998  78999999987653   233467899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|..++.       ...++++..+..++.||+.||.|||   +++||||||||+|||++.++.+||+|||+|..
T Consensus        95 E~~~~g~l~~~~~-------~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~  164 (309)
T d1u5ra_          95 EYCLGSASDLLEV-------HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASI  164 (309)
T ss_dssp             ECCSEEHHHHHHH-------HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred             EecCCCchHHHHH-------hCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccc
Confidence            9999999987765       4567999999999999999999999   89999999999999999999999999999998


Q ss_pred             cCCCcccccccccccccccc---------CCCcccHHHHHHHHhhccc------ccccccccccCCCCCCchHHHHHHHH
Q 045682          213 IPEGELLTGLRAFDLARLNE---------DDGYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGKEQQLQAYA  277 (309)
Q Consensus       213 ~~~~~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~  277 (309)
                      ........|...|.+|+...         ..+.|+++..+++++.+..      ..+.+..+..+..+...+...++++.
T Consensus       165 ~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~  244 (309)
T d1u5ra_         165 MAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFR  244 (309)
T ss_dssp             SSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHH
T ss_pred             cCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence            88777788988888887532         1345666666666655432      22333444445555444446678999


Q ss_pred             HHHHHcccCCCCCCCCHHHHHH
Q 045682          278 HLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       278 ~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +|+.+||+.||.+|||+.|+++
T Consensus       245 ~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         245 NFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHCcCChhHCcCHHHHHh
Confidence            9999999999999999999864

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-46  Score=322.60  Aligned_cols=231  Identities=17%  Similarity=0.244  Sum_probs=187.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ++|+..+.||+|+||+||+|.+  +|+.||||++........+.+.+|+.++++++|||||++++++.+++..++||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4689999999999999999998  79999999997665555678999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++.        ...+++.++..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|+....
T Consensus       100 ~gg~L~~~~~--------~~~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~  168 (293)
T d1yhwa1         100 AGGSLTDVVT--------ETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (293)
T ss_dssp             TTCBHHHHHH--------HSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             CCCcHHHHhh--------ccCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecc
Confidence            9999999875        346999999999999999999999   99999999999999999999999999999987644


Q ss_pred             Cc----cccccccccccccccCC------CcccHHHHHHHHhhcccc------ccccccccc-CCCCCCchHHHHHHHHH
Q 045682          216 GE----LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRL------NEIIDPLIM-GDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       216 ~~----~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~~~~~~~-g~~~~~~~~~~~~~l~~  278 (309)
                      ..    ...|...|.+|+.....      +.|+++..++.++.+...      .+.+..... +......+...++++.+
T Consensus       169 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  248 (293)
T d1yhwa1         169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD  248 (293)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHH
T ss_pred             ccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHH
Confidence            32    44577777777765443      334444444555443321      122222222 22233344567789999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      |+.+||+.||++|||+.|+++
T Consensus       249 li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         249 FLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-47  Score=324.84  Aligned_cols=233  Identities=16%  Similarity=0.196  Sum_probs=191.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      +.|+..+.||+|+||+||+|++  +++.||||++........+.+.+|+.+|++++|||||++++++.+++..++||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            5688889999999999999998  78999999998776667788999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++..      ....+++.++..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|+....
T Consensus        92 ~~g~L~~~~~~------~~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~  162 (288)
T d2jfla1          92 AGGAVDAVMLE------LERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR  162 (288)
T ss_dssp             TTEEHHHHHHH------HTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHH
T ss_pred             CCCcHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCC
Confidence            99999999752      2457999999999999999999999   89999999999999999999999999999976533


Q ss_pred             C----cccccccccccccccc-----------CCCcccHHHHHHHHhhcc------cccccccccccCCCCC-CchHHHH
Q 045682          216 G----ELLTGLRAFDLARLNE-----------DDGYVALRDHVKKYFEED------RLNEIIDPLIMGDRSC-SGKEQQL  273 (309)
Q Consensus       216 ~----~~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~-~~~~~~~  273 (309)
                      .    ....|...|.+|+...           ..+.|+++..+++++.+.      ...+++..+..+..+. ..+...+
T Consensus       163 ~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s  242 (288)
T d2jfla1         163 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS  242 (288)
T ss_dssp             HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSC
T ss_pred             CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCC
Confidence            2    2455777777776531           235566666666665543      2234444444454432 2345677


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +++.+|+.+||+.||++|||+.|+++
T Consensus       243 ~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         243 SNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            89999999999999999999999975

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-47  Score=326.30  Aligned_cols=246  Identities=18%  Similarity=0.246  Sum_probs=190.4

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .++|+...++|...+.||+|+||+||+|++ ++..||||++.... ...+.|.+|+.++.+++|||||+++|++.+ +..
T Consensus         9 ~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~   86 (285)
T d1fmka3           9 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI   86 (285)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             CcceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCe
Confidence            344444567899999999999999999999 66789999997654 345789999999999999999999999855 568


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecc
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS  208 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg  208 (309)
                      ++||||+++|+|..++...     ....++|.+++.++.|||.||+|||   +.+|+||||||+||||+.++++||+|||
T Consensus        87 ~lv~Ey~~~g~l~~~~~~~-----~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfG  158 (285)
T d1fmka3          87 YIVTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG  158 (285)
T ss_dssp             EEEECCCTTCBHHHHHSHH-----HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             EEEEEecCCCchhhhhhhc-----ccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccc
Confidence            9999999999999998532     3456999999999999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhhcc-------cccccccccccCCCCCCchH
Q 045682          209 FSISIPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEED-------RLNEIIDPLIMGDRSCSGKE  270 (309)
Q Consensus       209 ~a~~~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~  270 (309)
                      +|+......     ...|...|.+|+...      ..+.|+++..+|+++.+.       ...++++.+..+..+. .+.
T Consensus       159 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~-~~~  237 (285)
T d1fmka3         159 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPP  237 (285)
T ss_dssp             TTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-CCT
T ss_pred             hhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-CCc
Confidence            998765433     233445555555432      234566666667665432       2233444444454433 334


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          271 QQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       271 ~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      .+++++.+|+.+||+.||++||||.+|+++|++...
T Consensus       238 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         238 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             ccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            677899999999999999999999999999987653

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=320.04  Aligned_cols=230  Identities=17%  Similarity=0.268  Sum_probs=189.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||+||+|++  +++.||+|.+...   .......+.+|+.++++++|||||++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4688899999999999999999  7899999998643   2334567899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus        86 Ey~~~g~L~~~l~-------~~~~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~  155 (263)
T d2j4za1          86 EYAPLGTVYRELQ-------KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH  155 (263)
T ss_dssp             ECCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSC
T ss_pred             eecCCCcHHHHHh-------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeee
Confidence            9999999999987       4567999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc--cccccccccccccccC------CCcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHHHHHH
Q 045682          213 IPEGE--LLTGLRAFDLARLNED------DGYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQAYAH  278 (309)
Q Consensus       213 ~~~~~--~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~l~~  278 (309)
                      .....  ...|...|.+|+...+      .+.|+++..++.++.+.      ...+++..+..+....  +...++++.+
T Consensus       156 ~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--p~~~s~~~~~  233 (263)
T d2j4za1         156 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF--PDFVTEGARD  233 (263)
T ss_dssp             CCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC--CTTSCHHHHH
T ss_pred             cCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--CccCCHHHHH
Confidence            75543  4567778877765443      24455666666655443      2333444444444332  2356788999


Q ss_pred             HHHHcccCCCCCCCCHHHHHH
Q 045682          279 LIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       279 li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      |+.+||++||++|||+.|+++
T Consensus       234 li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         234 LISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCCHhHCcCHHHHHc
Confidence            999999999999999999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-47  Score=321.15  Aligned_cols=239  Identities=18%  Similarity=0.233  Sum_probs=185.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeee-CCceEEEEEec
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLE-TQIPILVFEYI  135 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e~~  135 (309)
                      .++|+..+.||+|+||.||+|+++|..||||+++..  ...+.|.+|++++++++||||++++|+|.+ .+..++||||+
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            356777889999999999999999999999999764  345779999999999999999999999865 45689999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.++|...     ....+++..+++++.|||.||.|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus        84 ~~g~L~~~l~~~-----~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~  155 (262)
T d1byga_          84 AKGSLVDYLRSR-----GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  155 (262)
T ss_dssp             TTEEHHHHHHHH-----HHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             CCCCHHHHHHhc-----CCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCC
Confidence            999999998632     2345899999999999999999999   89999999999999999999999999999987544


Q ss_pred             C-cccccccccccccccc------CCCcccHHHHHHHHhhc-c------cccccccccccCCCCCCchHHHHHHHHHHHH
Q 045682          216 G-ELLTGLRAFDLARLNE------DDGYVALRDHVKKYFEE-D------RLNEIIDPLIMGDRSCSGKEQQLQAYAHLIF  281 (309)
Q Consensus       216 ~-~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~  281 (309)
                      . ....+..++.+|+...      ..+.|+++..+|+++.. .      ...++.+.+..+..+.. +...++++.+|+.
T Consensus       156 ~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~  234 (262)
T d1byga_         156 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPPAVYEVMK  234 (262)
T ss_dssp             ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-CccCCHHHHHHHH
Confidence            3 2344555566655432      23556666667776642 2      23344555555544433 3467789999999


Q ss_pred             HcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          282 ECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       282 ~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      +||+.||.+||||.+|+++|+.++.
T Consensus       235 ~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         235 NCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHcccCHhHCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-46  Score=326.63  Aligned_cols=252  Identities=22%  Similarity=0.278  Sum_probs=198.8

Q ss_pred             HHHHHHHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCCc-hhHHHHHHHHHHHhhccCCcceeeeee
Q 045682           50 AKELEIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASKP-RMYDCCINNIVYASQMIHRCFFKLIGC  121 (309)
Q Consensus        50 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~  121 (309)
                      +.+++.++++|+..+.||+|+||+||+|++.       ++.||||++..... ...++|.+|+.+|++++||||++++++
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            3456667889999999999999999999973       37899999976543 345679999999999999999999999


Q ss_pred             eeeCCceEEEEEeccCCChhhhhhhhCC-----------------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 045682          122 CLETQIPILVFEYINCGSLADRIRIQHN-----------------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPV  184 (309)
Q Consensus       122 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i  184 (309)
                      |...+..+++|||+++|+|.+++.....                 .......+++..++.|+.|+|.||+|||   +.++
T Consensus        85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~i  161 (301)
T d1lufa_          85 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKF  161 (301)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred             eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCe
Confidence            9999999999999999999999863211                 1122345899999999999999999999   9999


Q ss_pred             EeCCCCCCCeeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhhcc--
Q 045682          185 IFRDFKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEED--  250 (309)
Q Consensus       185 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--  250 (309)
                      |||||||+|||++.++++||+|||+|+......      ...|..++.+++...      ..+.|+++..+|+++.+.  
T Consensus       162 vHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~  241 (301)
T d1lufa_         162 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  241 (301)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCC
Confidence            999999999999999999999999998664432      223444455554322      235677777777765432  


Q ss_pred             -----cccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 045682          251 -----RLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMY  305 (309)
Q Consensus       251 -----~~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~  305 (309)
                           ...+++..+..+..+.. +..+++++.+|+.+||+.+|++||||.||+++|+++.
T Consensus       242 p~~~~~~~e~~~~v~~~~~~~~-p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         242 PYYGMAHEEVIYYVRDGNILAC-PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TTTTSCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHcCCCCCC-CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence                 22345556666665433 3367789999999999999999999999999999875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-46  Score=327.55  Aligned_cols=246  Identities=16%  Similarity=0.207  Sum_probs=188.2

Q ss_pred             HHHhcCCCccCceeecCCeEEEEEEe--CC-----eEEEEEEecCC-CchhHHHHHHHHHHHhhc-cCCcceeeeeeeee
Q 045682           54 EIATNNYDSEKVIMKRSFYTLYKGFC--QE-----RLISVMKFDAS-KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE  124 (309)
Q Consensus        54 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~-----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  124 (309)
                      +...++|+..+.||+|+||+||+|++  .+     ..||+|.+... .......+.+|+.++.++ +|||||+++|++.+
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~  112 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL  112 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee
Confidence            34557788999999999999999998  22     36999998664 334456799999999999 89999999999999


Q ss_pred             CCceEEEEEeccCCChhhhhhhhCCC----------------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCC
Q 045682          125 TQIPILVFEYINCGSLADRIRIQHNP----------------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD  188 (309)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~d  188 (309)
                      .+..++||||+++|+|.++|......                ......+++..++.++.||+.||+|||   +++|||||
T Consensus       113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRD  189 (325)
T d1rjba_         113 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRD  189 (325)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETT
T ss_pred             CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecc
Confidence            99999999999999999999632210                012346899999999999999999999   89999999


Q ss_pred             CCCCCeeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-ccc----
Q 045682          189 FKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR----  251 (309)
Q Consensus       189 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~----  251 (309)
                      |||+|||++.++++||+|||+|+......      ...|...|.+|+...      ..+.|+++..+|+++. +..    
T Consensus       190 lKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~  269 (325)
T d1rjba_         190 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG  269 (325)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             CchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCC
Confidence            99999999999999999999998764432      222445566665322      2356677777777664 322    


Q ss_pred             --ccccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 045682          252 --LNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK  302 (309)
Q Consensus       252 --~~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~  302 (309)
                        ..+.+.....+...++.+..+++++.+||.+||+.||++||||.||++.|.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         270 IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence              122233344444444444577889999999999999999999999999985

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-46  Score=319.25  Aligned_cols=238  Identities=14%  Similarity=0.155  Sum_probs=175.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee--CCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE--TQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv  131 (309)
                      ++|+..+.||+|+||+||+|++  +|+.||+|.+....  ....+.+.+|+.++++++|||||++++++.+  ++..++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5688899999999999999998  78999999987653  3445678999999999999999999999865  4568999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGF--PRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~--~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      |||+++|+|.+++.....   ....+++..++.++.||+.||.|||+..  ..+||||||||+|||++.++.+||+|||+
T Consensus        84 mEy~~~g~L~~~i~~~~~---~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~  160 (269)
T d2java1          84 MEYCEGGDLASVITKGTK---ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  160 (269)
T ss_dssp             EECCTTEEHHHHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHH
T ss_pred             EecCCCCcHHHHHHhccc---cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccc
Confidence            999999999999863211   3567999999999999999999999310  13499999999999999999999999999


Q ss_pred             ccccCCCc----cccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHH
Q 045682          210 SISIPEGE----LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQL  273 (309)
Q Consensus       210 a~~~~~~~----~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~  273 (309)
                      |+......    ...|...|.+|+.....      +.|+++..+++++.+.      ...++...+..+..+.. +...+
T Consensus       161 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~s  239 (269)
T d2java1         161 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI-PYRYS  239 (269)
T ss_dssp             HHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC-CTTSC
T ss_pred             eeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CcccC
Confidence            98765432    34566777777754332      3344555555554433      22334444455554432 33667


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +++.+|+.+||+.||++|||+.||++
T Consensus       240 ~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         240 DELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            88999999999999999999999974

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-46  Score=317.46  Aligned_cols=241  Identities=16%  Similarity=0.216  Sum_probs=182.8

Q ss_pred             HhcCCCccCceeecCCeEEEEEEe--C---CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           56 ATNNYDSEKVIMKRSFYTLYKGFC--Q---ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        56 ~~~~~~~~~~lg~G~~g~V~~~~~--~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ..++|+..+.||+|+||.||+|++  +   +..||||.+.... ....+.|.+|+.++++++||||++++|++. ++..+
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~   83 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   83 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEE
Confidence            456788899999999999999998  2   3568999987653 334567999999999999999999999986 46789


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|+|.+++..      ....+++..++.++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||+
T Consensus        84 iv~E~~~~g~l~~~~~~------~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~  154 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQV------RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGL  154 (273)
T ss_dssp             EEEECCTTEEHHHHHHH------TTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---
T ss_pred             EEEEeccCCcHHhhhhc------cCCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchh
Confidence            99999999999998752      3567999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCc-----ccccccccccccccc------CCCcccHHHHHHHHhh-cc------cccccccccccCCCCCCchHH
Q 045682          210 SISIPEGE-----LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~-----~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~~~~~~~~~  271 (309)
                      |+......     ...|...+.+++...      ..+.|+++..+|+++. +.      ...+++..+..+..+.. +..
T Consensus       155 a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~-~~~  233 (273)
T d1mp8a_         155 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM-PPN  233 (273)
T ss_dssp             ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC-CTT
T ss_pred             heeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCC
Confidence            98764332     223334444444322      2356667777776653 22      23344445555554433 346


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      +++++.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus       234 ~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         234 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            788999999999999999999999999999988654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-45  Score=313.24  Aligned_cols=229  Identities=16%  Similarity=0.232  Sum_probs=180.3

Q ss_pred             CccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeee----CCceEEEE
Q 045682           61 DSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE----TQIPILVF  132 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv~  132 (309)
                      ...+.||+|+||+||+|.+  ++..||+|.+...  .....+.|.+|+++|++++|||||++++++.+    +...++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            4456799999999999999  6889999998664  33445679999999999999999999999865    34579999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeCCCCCCCeeec-CCCcEEEeeccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRP--VIFRDFKLSNILFN-EENVAKLFDFSF  209 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--iiH~dlkp~Nill~-~~~~~kl~Dfg~  209 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||+|||   +++  |+||||||+|||++ +++.+||+|||+
T Consensus        92 E~~~~g~L~~~l~-------~~~~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGl  161 (270)
T d1t4ha_          92 ELMTSGTLKTYLK-------RFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  161 (270)
T ss_dssp             ECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             eCCCCCcHHHHHh-------ccccccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCc
Confidence            9999999999997       4567999999999999999999999   777  99999999999996 578999999999


Q ss_pred             ccccCCC--ccccccccccccccccC-----CCcccHHHHHHHHhhccc-------ccccccccccCCCCCCchHHHHHH
Q 045682          210 SISIPEG--ELLTGLRAFDLARLNED-----DGYVALRDHVKKYFEEDR-------LNEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       210 a~~~~~~--~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      |+.....  ....|...|.+|+....     .+.|+++..+++++.+..       ..++...+..+..+...+...+++
T Consensus       162 a~~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  241 (270)
T d1t4ha_         162 ATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE  241 (270)
T ss_dssp             GGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred             ceeccCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHH
Confidence            9865443  24567888888876532     234445555555544322       122333444444444444456678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||++||++|||+.|+++
T Consensus       242 ~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         242 VKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHccCCHhHCcCHHHHhC
Confidence            999999999999999999999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-45  Score=320.33  Aligned_cols=256  Identities=18%  Similarity=0.272  Sum_probs=186.9

Q ss_pred             ccHHHHHHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceee
Q 045682           48 FSAKELEIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKL  118 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l  118 (309)
                      +...+|+...++|+..+.||+|+||.||+|.+       +++.||||++.... ....+.+.+|+.++.++ +|+||+.+
T Consensus         3 ~~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~   82 (299)
T d1ywna1           3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   82 (299)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEe
Confidence            45566766778899999999999999999997       23689999987643 34456788999988888 79999999


Q ss_pred             eeeeeeC-CceEEEEEeccCCChhhhhhhhCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCC
Q 045682          119 IGCCLET-QIPILVFEYINCGSLADRIRIQHNP---------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD  188 (309)
Q Consensus       119 ~g~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~d  188 (309)
                      ++++..+ ...++||||+++|+|.+++......         ......+++.+++.++.|||.||+|||   +++|||||
T Consensus        83 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrD  159 (299)
T d1ywna1          83 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD  159 (299)
T ss_dssp             EEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             eeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCc
Confidence            9998764 4689999999999999999633210         112346899999999999999999999   99999999


Q ss_pred             CCCCCeeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhhccc--c--
Q 045682          189 FKLSNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEEDR--L--  252 (309)
Q Consensus       189 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~--  252 (309)
                      |||+||||++++++||+|||+|+......      ...|...|.+|+...      ..+.|+++..+|+++....  +  
T Consensus       160 lKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~  239 (299)
T d1ywna1         160 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  239 (299)
T ss_dssp             CCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999998654332      234566666666432      2345666666666654321  1  


Q ss_pred             ---ccc-ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          253 ---NEI-IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       253 ---~~~-~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                         .+. ...+..+.. +..+..+++++.+|+.+||+.||++|||+.||++.|+++.++
T Consensus       240 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         240 VKIDEEFCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             CCCSHHHHHHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCC-CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence               111 112222333 333346678899999999999999999999999999999875

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-45  Score=317.13  Aligned_cols=246  Identities=20%  Similarity=0.222  Sum_probs=190.7

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe--EEEEEEecCC-CchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER--LISVMKFDAS-KPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|+..+.||+|+||+||+|.+  ++.  .||||++... .....+.|.+|+++|.++ +|||||+++|+|.+++..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            5688889999999999999999  554  5788887654 334456799999999999 799999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCC---------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcE
Q 045682          132 FEYINCGSLADRIRIQHN---------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVA  202 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~---------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~  202 (309)
                      |||+++|+|.++|.....         .......+++..+..++.|||.||.|||   +.+|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCce
Confidence            999999999999862210         0123567999999999999999999999   9999999999999999999999


Q ss_pred             EEeecccccccCCCc---ccccccccccccccc------CCCcccHHHHHHHHhhcc-------cccccccccccCCCCC
Q 045682          203 KLFDFSFSISIPEGE---LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEED-------RLNEIIDPLIMGDRSC  266 (309)
Q Consensus       203 kl~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~  266 (309)
                      ||+|||+|+......   ...|..++.+|+...      ..+.|+++..+|+++.+.       ...++++.+..+..+.
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~  246 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE  246 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCC
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCC
Confidence            999999997654322   334555666555432      234566666666665432       2234455555555443


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      . +..+++++.+|+.+||+.||++||||.+|++.|+++.+.
T Consensus       247 ~-~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         247 K-PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             C-CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             C-CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            3 346778999999999999999999999999999998754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.4e-44  Score=319.15  Aligned_cols=233  Identities=14%  Similarity=0.191  Sum_probs=189.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEec
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYI  135 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  135 (309)
                      ++|+..+.||+|+||.||+|.+  +|+.||||++........+.+.+|+.+|++++|||||++++++.+++..++||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5799999999999999999998  78999999998776666678999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec--CCCcEEEeeccccccc
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENVAKLFDFSFSISI  213 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~a~~~  213 (309)
                      ++|+|.+++.      .....+++..+..++.||+.||.|||   +.+||||||||+|||++  .++.+||+|||+|+..
T Consensus       106 ~gg~L~~~l~------~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~  176 (350)
T d1koaa2         106 SGGELFEKVA------DEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  176 (350)
T ss_dssp             CSCBHHHHHT------CTTSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEEC
T ss_pred             CCCCHHHHHH------hhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheec
Confidence            9999999984      23567999999999999999999999   99999999999999995  4678999999999887


Q ss_pred             CCCc---cccccccccccccccCC------CcccHHHHHHHHhhccc------ccccccccccCCCCCC--chHHHHHHH
Q 045682          214 PEGE---LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCS--GKEQQLQAY  276 (309)
Q Consensus       214 ~~~~---~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~--~~~~~~~~l  276 (309)
                      ....   ...|...|.+|+...+.      +.|+++..++.++.+..      ..+++..+..+.....  .....++++
T Consensus       177 ~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  256 (350)
T d1koaa2         177 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG  256 (350)
T ss_dssp             CTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHH
T ss_pred             ccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            5543   35677777777754432      34455555555554432      2334444444443332  223556889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||++|||+.|+++
T Consensus       257 ~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         257 KDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999999999975

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.2e-44  Score=319.87  Aligned_cols=234  Identities=15%  Similarity=0.190  Sum_probs=189.1

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|+..+.||+|+||.||+|++  +++.||||.+..........+.+|+.+|++++|||||++++++.+++..++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35699999999999999999998  7899999999877655667789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec--CCCcEEEeecccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENVAKLFDFSFSIS  212 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~a~~  212 (309)
                      +++|+|.+++.      .....+++..+..++.||+.||.|||   +.+||||||||+||||+  .++.+||+|||+|..
T Consensus       108 ~~gg~L~~~~~------~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~  178 (352)
T d1koba_         108 LSGGELFDRIA------AEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATK  178 (352)
T ss_dssp             CCCCBHHHHTT------CTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             CCCChHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeeccccee
Confidence            99999999874      23457999999999999999999999   99999999999999997  678999999999998


Q ss_pred             cCCCc---cccccccccccccccCC------CcccHHHHHHHHhhccc------ccccccccccCCCCCC--chHHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCS--GKEQQLQA  275 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~--~~~~~~~~  275 (309)
                      ...+.   ...|...+.+|+.....      +.|+++..++.++.+..      ..+++..+..+...++  .....+++
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  258 (352)
T d1koba_         179 LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE  258 (352)
T ss_dssp             CCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHH
T ss_pred             cCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHH
Confidence            76554   34566666666654332      33445555555544332      2334444444544332  22356788


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||+.||.+|||+.|+++
T Consensus       259 ~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         259 AKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999999975

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-44  Score=312.68  Aligned_cols=235  Identities=15%  Similarity=0.272  Sum_probs=185.6

Q ss_pred             cCceeecCCeEEEEEEe-C----CeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeee-CCceEEEEEec
Q 045682           63 EKVIMKRSFYTLYKGFC-Q----ERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE-TQIPILVFEYI  135 (309)
Q Consensus        63 ~~~lg~G~~g~V~~~~~-~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e~~  135 (309)
                      .++||+|+||+||+|++ .    ...||||+++.. .....++|.+|+++|++++||||++++|++.. ++..++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            46799999999999998 2    136899999754 44556789999999999999999999999876 56889999999


Q ss_pred             cCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccCC
Q 045682          136 NCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE  215 (309)
Q Consensus       136 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  215 (309)
                      ++|+|.+++.      .....+++..++.++.|+|.||.|||   +.+|+||||||+|||+++++.+||+|||+++....
T Consensus       112 ~~g~l~~~~~------~~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~  182 (311)
T d1r0pa_         112 KHGDLRNFIR------NETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  182 (311)
T ss_dssp             TTCBHHHHHH------CTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTT
T ss_pred             ecCchhhhhc------cccccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhccc
Confidence            9999999986      24556788999999999999999999   99999999999999999999999999999987654


Q ss_pred             Ccc--------cccccccccccccc------CCCcccHHHHHHHHhhcc-c------ccccccccccCCCCCCchHHHHH
Q 045682          216 GEL--------LTGLRAFDLARLNE------DDGYVALRDHVKKYFEED-R------LNEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       216 ~~~--------~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      ...        ..|...+.+|+...      ..+.|+++..+|+++.+. .      ..++...+..|..+.. +..+++
T Consensus       183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~-p~~~~~  261 (311)
T d1r0pa_         183 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPD  261 (311)
T ss_dssp             TTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCC-CTTCCH
T ss_pred             cccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-cccCcH
Confidence            431        22444455444322      224566666667665432 1      2234444455554433 346678


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      ++.+|+.+||+.||++||||.||++.|+++.++
T Consensus       262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999875

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-45  Score=321.30  Aligned_cols=233  Identities=13%  Similarity=0.156  Sum_probs=182.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|+..+.||+|+||+||+|.+  +++.||+|++... .......+.+|+.+|++++|||||++++++.+++..++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            56799999999999999999998  7899999998765 34445779999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR-PVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      |+++|+|.+++.       ....+++..+..++.|++.||.|||   +. +|+||||||+|||++.++.+||+|||+|+.
T Consensus        85 y~~gg~L~~~l~-------~~~~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~  154 (322)
T d1s9ja_          85 HMDGGSLDQVLK-------KAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  154 (322)
T ss_dssp             CCTTEEHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred             cCCCCcHHHHHh-------hcCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccc
Confidence            999999999987       4457999999999999999999999   64 899999999999999999999999999986


Q ss_pred             cCCC--ccccccccccccccccC------CCcccHHHHHHHHhhccccccc---------cccccc--------------
Q 045682          213 IPEG--ELLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEI---------IDPLIM--------------  261 (309)
Q Consensus       213 ~~~~--~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~--------------  261 (309)
                      ....  ....|...|.+|+...+      .+.|+++..+++++.+.....-         ......              
T Consensus       155 ~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (322)
T d1s9ja_         155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  234 (322)
T ss_dssp             HHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------
T ss_pred             cCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence            5332  34567888887765443      2446666666666554321100         000000              


Q ss_pred             -------------------------CCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          262 -------------------------GDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       262 -------------------------g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                               ...+..+....+.++.+|+.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             -----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                                     00011111123567999999999999999999999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=316.58  Aligned_cols=238  Identities=18%  Similarity=0.242  Sum_probs=186.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCe----EEEEEEecCC-CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QER----LISVMKFDAS-KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  130 (309)
                      .+|+..++||+|+||+||+|.+  +|+    +||+|++... .....++|.+|+.++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            4588899999999999999998  443    6899998654 344567899999999999999999999999875 5788


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS  210 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  210 (309)
                      ++||+.+|+|.+++..      ....+++..++.++.|||.||.|||   +++||||||||+|||++.++.+||+|||+|
T Consensus        88 v~e~~~~~~l~~~~~~------~~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla  158 (317)
T d1xkka_          88 ITQLMPFGCLLDYVRE------HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLA  158 (317)
T ss_dssp             EEECCTTCBHHHHHHH------TSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHH
T ss_pred             EEEeccCCcccccccc------cccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccc
Confidence            8999999999998752      4567999999999999999999999   899999999999999999999999999999


Q ss_pred             cccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cc------cccccccccccCCCCCCchHH
Q 045682          211 ISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEIIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       211 ~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~~~~~~~~~  271 (309)
                      +......      ...|...|.+|+...      ..+.|+++..+|+++. +.      ...++...+..|..+.. +..
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~-p~~  237 (317)
T d1xkka_         159 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-PPI  237 (317)
T ss_dssp             HHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCC-CTT
T ss_pred             eecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-Ccc
Confidence            8764432      223555666666432      3355666667776654 22      22334444444554433 346


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR  306 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~  306 (309)
                      ++.++.+|+.+||+.||++|||+.+|++.|..+.+
T Consensus       238 ~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         238 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            77889999999999999999999999999988764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.6e-45  Score=316.39  Aligned_cols=233  Identities=15%  Similarity=0.170  Sum_probs=173.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .+.|+..+.||+|+||+||+|.+  +++.||||.+.... ......+.+|+.+|++++|||||++++++.+++..++|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            46688899999999999999998  78999999987653 2334568899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec---CCCcEEEeecccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN---EENVAKLFDFSFS  210 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~a  210 (309)
                      |+++|+|.+++.       ....+++..+..++.||+.||+|||   +.+|+||||||+|||+.   .++.+||+|||+|
T Consensus        88 ~~~gg~L~~~l~-------~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a  157 (307)
T d1a06a_          88 LVSGGELFDRIV-------EKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS  157 (307)
T ss_dssp             CCCSCBHHHHHH-------TCSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC---
T ss_pred             ccCCCcHHHhhh-------cccCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEecccee
Confidence            999999999997       5678999999999999999999999   99999999999999994   5789999999999


Q ss_pred             cccCCCc---cccccccccccccccCC------CcccHHHHHHHHhhccc------ccccccccccCCCCCC--chHHHH
Q 045682          211 ISIPEGE---LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCS--GKEQQL  273 (309)
Q Consensus       211 ~~~~~~~---~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~--~~~~~~  273 (309)
                      +......   ...|...|.+|+.....      +.|+++..++.++.+..      ..++...+..+.....  .....+
T Consensus       158 ~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  237 (307)
T d1a06a_         158 KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS  237 (307)
T ss_dssp             ---------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred             EEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCC
Confidence            8775543   34577788777764433      33444445555544332      2334444444544332  223567


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          274 QAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       274 ~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +++.+|+.+||+.||++|||+.|+++
T Consensus       238 ~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         238 DSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            88999999999999999999999976

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-44  Score=315.91  Aligned_cols=253  Identities=16%  Similarity=0.230  Sum_probs=195.9

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEe-------CCeEEEEEEecCCC-chhHHHHHHHHHHHhhc-cCCcceeeeeee
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFC-------QERLISVMKFDASK-PRMYDCCINNIVYASQM-IHRCFFKLIGCC  122 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~g~~  122 (309)
                      +|+...++|+..+.||+|+||.||+|++       +++.||||++.... ......|.+|+.++.++ +|||||+++|+|
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            3555668899999999999999999986       34789999997654 34456799999999999 799999999999


Q ss_pred             eeCCceEEEEEeccCCChhhhhhhhCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCC
Q 045682          123 LETQIPILVFEYINCGSLADRIRIQHNP-----------QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKL  191 (309)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp  191 (309)
                      .++...++||||+++|+|.+++......           ......+++..+..++.|||.||+|||   +.++|||||||
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp  173 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAA  173 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccccc
Confidence            9999999999999999999998643211           123446999999999999999999999   89999999999


Q ss_pred             CCeeecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cccc------
Q 045682          192 SNILFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDRL------  252 (309)
Q Consensus       192 ~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~------  252 (309)
                      +|||++.++.+||+|||+++......      ...|...+.+++...      ..+.|+++..+|+++. +..+      
T Consensus       174 ~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~  253 (311)
T d1t46a_         174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV  253 (311)
T ss_dssp             GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred             ccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999999999998765432      233445555554332      2345666667777664 2221      


Q ss_pred             cccccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          253 NEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       253 ~~~~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+.+............+...+.++.+|+.+||+.||++||||.+|+++|+++..+
T Consensus       254 ~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         254 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             SHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            2222233333333334446678899999999999999999999999999876554

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-45  Score=311.39  Aligned_cols=237  Identities=20%  Similarity=0.273  Sum_probs=178.6

Q ss_pred             cCCCccCceeecCCeEEEEEEe---CC--eEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC---QE--RLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~---~~--~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++|+..+.||+|+||.||+|++   ++  ..||||++...   .....+.|.+|+.+|++++||||++++|++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            5688889999999999999987   22  47899998764   23445789999999999999999999999976 4678


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|++.+++..      ....+++..++.++.|||.||.|||   +++|+||||||+|||++.++.+||+|||+
T Consensus        87 lv~e~~~~~~l~~~~~~------~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl  157 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRK------HQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGL  157 (273)
T ss_dssp             EEEECCTTCBHHHHHHH------HGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred             eeeeeecCcchhhhhhc------ccCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchh
Confidence            99999999999998763      3456999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCc-------ccccccccccccccc------CCCcccHHHHHHHHhh-ccc------ccccccccccCCCCCCch
Q 045682          210 SISIPEGE-------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-EDR------LNEIIDPLIMGDRSCSGK  269 (309)
Q Consensus       210 a~~~~~~~-------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~g~~~~~~~  269 (309)
                      ++......       ...|...+.+|+...      ..+.|+++..+|+++. +..      ..+++..+..+...++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  237 (273)
T d1u46a_         158 MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP  237 (273)
T ss_dssp             CEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCC
T ss_pred             hhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCc
Confidence            99874432       222333444444222      2356777777777664 332      223334444444333444


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       270 ~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      ...+.++.+|+..||+.||++||||.+|++.|++.
T Consensus       238 ~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         238 EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            46778999999999999999999999999998875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-45  Score=314.63  Aligned_cols=230  Identities=18%  Similarity=0.185  Sum_probs=185.8

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||+||+|.+  +++.||||.+...   .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5689999999999999999998  7899999998653   2234567999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ..+.+++..+..++.|++.||.|||   +.+||||||||+|||+++++.+||+|||+|+.
T Consensus        88 Ey~~gg~L~~~~~-------~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~  157 (288)
T d1uu3a_          88 SYAKNGELLKYIR-------KIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV  157 (288)
T ss_dssp             CCCTTEEHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EccCCCCHHHhhh-------ccCCCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEeccccccee
Confidence            9999999999987       4567999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCc------cccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHH
Q 045682          213 IPEGE------LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQ  274 (309)
Q Consensus       213 ~~~~~------~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~  274 (309)
                      .....      ...|...|.+|+.....      +.|+++..++.++.+.      ...++...+..+....  +...++
T Consensus       158 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~--p~~~s~  235 (288)
T d1uu3a_         158 LSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP  235 (288)
T ss_dssp             CC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCC--CTTCCH
T ss_pred             cccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCC--CccCCH
Confidence            64322      34578888888765432      3444444445444433      2233444445554433  235678


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          275 AYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       275 ~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ++.+|+.+||+.||++|||+.|+++
T Consensus       236 ~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         236 KARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHcC
Confidence            8999999999999999999999753

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.2e-44  Score=308.19  Aligned_cols=232  Identities=17%  Similarity=0.244  Sum_probs=186.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc---------hhHHHHHHHHHHHhhcc-CCcceeeeeeeeeC
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP---------RMYDCCINNIVYASQMI-HRCFFKLIGCCLET  125 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~  125 (309)
                      ++|+..+.||+|+||+||+|++  +++.||||++.....         ...+.+.+|+.++++++ ||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            6788999999999999999998  789999999876431         12246889999999996 99999999999999


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      +..|+||||+++|+|.+++.       ....+++.++..++.||+.||+|||   ..+|+||||||+|||++.++.+||+
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~-------~~~~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~  152 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLT-------EKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLT  152 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             cceEEEEEcCCCchHHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEc
Confidence            99999999999999999997       4567999999999999999999999   8999999999999999999999999


Q ss_pred             ecccccccCCCc---ccccccccccccccc------------CCCcccHHHHHHHHhhcc------cccccccccccCCC
Q 045682          206 DFSFSISIPEGE---LLTGLRAFDLARLNE------------DDGYVALRDHVKKYFEED------RLNEIIDPLIMGDR  264 (309)
Q Consensus       206 Dfg~a~~~~~~~---~~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~  264 (309)
                      |||+++....+.   ...|..++.+++...            ..+.|+++..++.++.+.      ...+....+..+..
T Consensus       153 DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~  232 (277)
T d1phka_         153 DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY  232 (277)
T ss_dssp             CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             cchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC
Confidence            999998876543   344566666655432            124555565555554443      22333344444543


Q ss_pred             CC--CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          265 SC--SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       265 ~~--~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      ..  +.....++++.+|+.+||++||++|||+.||++
T Consensus       233 ~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         233 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            32  233467789999999999999999999999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-44  Score=309.46  Aligned_cols=233  Identities=16%  Similarity=0.168  Sum_probs=186.3

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC------chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCce
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK------PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIP  128 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  128 (309)
                      .+.|+..+.||+|+||+||+|.+  +|+.||||++....      ....+.+.+|+.+|++++|||||++++++.+++..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            36789999999999999999998  78999999986532      22357799999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC----cEEE
Q 045682          129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN----VAKL  204 (309)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~----~~kl  204 (309)
                      ++||||+++|+|.+++.       ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++    .+||
T Consensus        89 ~iv~E~~~gg~L~~~i~-------~~~~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl  158 (293)
T d1jksa_          89 ILILELVAGGELFDFLA-------EKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI  158 (293)
T ss_dssp             EEEEECCCSCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEE
T ss_pred             EEEEEcCCCccccchhc-------cccccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEe
Confidence            99999999999999987       4467999999999999999999999   99999999999999998776    5999


Q ss_pred             eecccccccCCCc---cccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCCCc-
Q 045682          205 FDFSFSISIPEGE---LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSG-  268 (309)
Q Consensus       205 ~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~-  268 (309)
                      +|||+|.......   ...|...|.+|+.....      +.|+++..++.++.+.      ...+.+..+..+....+. 
T Consensus       159 ~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  238 (293)
T d1jksa_         159 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDE  238 (293)
T ss_dssp             CCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHH
T ss_pred             cchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCch
Confidence            9999998875443   34566667776654332      3455555555554433      223344444445444332 


Q ss_pred             -hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          269 -KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       269 -~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                       +...+.++.+|+.+||+.||++|||+.|+++
T Consensus       239 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         239 YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             1245678999999999999999999999975

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-45  Score=316.07  Aligned_cols=250  Identities=17%  Similarity=0.235  Sum_probs=195.2

Q ss_pred             HHHHHHhcCCCccCceeecCCeEEEEEEeC-------CeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeee
Q 045682           51 KELEIATNNYDSEKVIMKRSFYTLYKGFCQ-------ERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCC  122 (309)
Q Consensus        51 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~  122 (309)
                      ++|+...++|...+.||+|+||+||+|.+.       +..||||+++... ......|.+|+.++++++||||++++|+|
T Consensus        13 ~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~   92 (308)
T d1p4oa_          13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   92 (308)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             cceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEE
Confidence            455666788999999999999999999873       4789999997653 33445689999999999999999999999


Q ss_pred             eeCCceEEEEEeccCCChhhhhhhhCC---CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC
Q 045682          123 LETQIPILVFEYINCGSLADRIRIQHN---PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE  199 (309)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~  199 (309)
                      ..++..++||||+++|+|.+++.....   .......+++..+..++.|+|+||.|||   +.+|+||||||+|||++.+
T Consensus        93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~  169 (308)
T d1p4oa_          93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED  169 (308)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred             ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCC
Confidence            999999999999999999999864321   1123345799999999999999999999   8999999999999999999


Q ss_pred             CcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhhcc-------cccccccccc
Q 045682          200 NVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFEED-------RLNEIIDPLI  260 (309)
Q Consensus       200 ~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  260 (309)
                      +++||+|||+|+......      ...|...+.+++...      ..+.|+++..+|+++.+.       ...+++..+.
T Consensus       170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~  249 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM  249 (308)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred             ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            999999999998664432      112334444444322      235566676777665432       2334455555


Q ss_pred             cCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 045682          261 MGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQM  304 (309)
Q Consensus       261 ~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l  304 (309)
                      .+..+.. +..+++.+.+|+.+||+.+|++||||.+|+++|++.
T Consensus       250 ~~~~~~~-p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         250 EGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             TTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             hCCCCCC-cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            5555433 336778899999999999999999999999998765

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-44  Score=308.54  Aligned_cols=238  Identities=18%  Similarity=0.208  Sum_probs=180.8

Q ss_pred             CCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHH--HHHHHhhccCCcceeeeeeeeeCC----ceEEEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCIN--NIVYASQMIHRCFFKLIGCCLETQ----IPILVF  132 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~--e~~~l~~l~h~niv~l~g~~~~~~----~~~lv~  132 (309)
                      +|...+.||+|+||+||+|+++|+.||||++....   ...+..  |+..+.+++||||++++|+|.+++    ..++||
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~   80 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence            46667889999999999999999999999986543   233434  555556789999999999998654    578999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG-----FPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-----~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      ||+++|+|.++|.        ...++|.+++.++.|+|.||+|||+.     ..++||||||||+||||+.++++||+||
T Consensus        81 Ey~~~g~L~~~l~--------~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DF  152 (303)
T d1vjya_          81 DYHEHGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  152 (303)
T ss_dssp             ECCTTCBHHHHHH--------HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred             ecccCCCHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEec
Confidence            9999999999996        34699999999999999999999942     1369999999999999999999999999


Q ss_pred             ccccccCCCc--------cccccccccccccccC------------CCcccHHHHHHHHhhccccccc------------
Q 045682          208 SFSISIPEGE--------LLTGLRAFDLARLNED------------DGYVALRDHVKKYFEEDRLNEI------------  255 (309)
Q Consensus       208 g~a~~~~~~~--------~~~g~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~------------  255 (309)
                      |+++......        ...|...|.+|+....            .+.|+++..+|+++.+..+...            
T Consensus       153 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~  232 (303)
T d1vjya_         153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  232 (303)
T ss_dssp             TTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred             CccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcc
Confidence            9998764332        2346677777665332            3567777777777655322110            


Q ss_pred             ---------ccccccCCCCCC-----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          256 ---------IDPLIMGDRSCS-----GKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       256 ---------~~~~~~g~~~~~-----~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                               .+....+...+.     .....+..+.+|+.+||+.||++||||.||++.|+++..+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence                     111111111111     1224567799999999999999999999999999998764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-43  Score=306.64  Aligned_cols=233  Identities=12%  Similarity=0.158  Sum_probs=183.7

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      .++|+..+.||+|+||+||+|.+  +++.||||.+.... .....+.+|+.+|+.++|||||++++++.+++..|+||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            36788899999999999999998  78999999997654 3345688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCC--CcEEEeecccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE--NVAKLFDFSFSIS  212 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~a~~  212 (309)
                      +++|+|.+++.      .....+++.++..++.||+.||.|||   +.+|+||||||+|||++.+  +.+||+|||+++.
T Consensus        83 ~~gg~L~~~i~------~~~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~  153 (321)
T d1tkia_          83 ISGLDIFERIN------TSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             CCCCBHHHHHT------SSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             CCCCcHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhc
Confidence            99999999985      12347999999999999999999999   9999999999999999854  5899999999988


Q ss_pred             cCCCc---cccccccccccccccC------CCcccHHHHHHHHhhcc------cccccccccccCCCCCCch--HHHHHH
Q 045682          213 IPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGK--EQQLQA  275 (309)
Q Consensus       213 ~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~--~~~~~~  275 (309)
                      .....   ...|...+.+++....      .+.|+++..++.++.+.      ...+++..+..+...++..  ...+++
T Consensus       154 ~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  233 (321)
T d1tkia_         154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE  233 (321)
T ss_dssp             CCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred             cccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHH
Confidence            75543   3345555555554322      13444444444444333      2234444555555544322  134678


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHH
Q 045682          276 YAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      +.+|+.+||+.||++|||+.|+++
T Consensus       234 ~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         234 AMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999999986

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=306.48  Aligned_cols=250  Identities=16%  Similarity=0.243  Sum_probs=188.8

Q ss_pred             HHhcCCCccCceeecCCeEEEEEEe--CC-------eEEEEEEecCCCc-hhHHHHHHHHHHHhhc-cCCcceeeeeeee
Q 045682           55 IATNNYDSEKVIMKRSFYTLYKGFC--QE-------RLISVMKFDASKP-RMYDCCINNIVYASQM-IHRCFFKLIGCCL  123 (309)
Q Consensus        55 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~-------~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  123 (309)
                      ...++|...+.||+|+||.||+|++  .+       ..||||++..... ....++.+|...+.++ +|||||+++|+|.
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~   89 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   89 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence            3456788899999999999999987  22       4799999977543 4457799999999999 8999999999999


Q ss_pred             eCCceEEEEEeccCCChhhhhhhhCC---------CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCe
Q 045682          124 ETQIPILVFEYINCGSLADRIRIQHN---------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI  194 (309)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Ni  194 (309)
                      +++..++||||+++|+|.+++.....         .......+++.+++.++.|||.||+|||   +.+||||||||+||
T Consensus        90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~Ni  166 (299)
T d1fgka_          90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV  166 (299)
T ss_dssp             SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred             cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccce
Confidence            99999999999999999999963321         1123456899999999999999999999   99999999999999


Q ss_pred             eecCCCcEEEeecccccccCCCc------ccccccccccccccc------CCCcccHHHHHHHHhh-cc------ccccc
Q 045682          195 LFNEENVAKLFDFSFSISIPEGE------LLTGLRAFDLARLNE------DDGYVALRDHVKKYFE-ED------RLNEI  255 (309)
Q Consensus       195 ll~~~~~~kl~Dfg~a~~~~~~~------~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~------~~~~~  255 (309)
                      |++.++.+||+|||+++......      ...|...+.+++...      ..+.|+++..+|+++. +.      ...++
T Consensus       167 Ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~  246 (299)
T d1fgka_         167 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  246 (299)
T ss_dssp             EECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             eecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH
Confidence            99999999999999998764432      233444555544322      2345666667777653 22      22333


Q ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          256 IDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       256 ~~~~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ...+..+..+ ..+...++++.+|+.+||+.||++|||+.||++.|+++....
T Consensus       247 ~~~i~~~~~~-~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~~  298 (299)
T d1fgka_         247 FKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  298 (299)
T ss_dssp             HHHHHTTCCC-CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHcCCCC-CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhcC
Confidence            4444444333 333466788999999999999999999999999999997543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-43  Score=309.48  Aligned_cols=230  Identities=17%  Similarity=0.212  Sum_probs=188.4

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|+.  +++.||||++...   .....+.+.+|+.+|+.++||||+++++++.+++..++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5688999999999999999998  7899999998653   2234577899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|.+++.       ....+++..+..++.||+.||.|||   +++||||||||+|||++.+|.+||+|||+|+.
T Consensus        85 ey~~gg~L~~~~~-------~~~~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~  154 (337)
T d1o6la_          85 EYANGGELFFHLS-------RERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE  154 (337)
T ss_dssp             ECCTTCBHHHHHH-------HHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             eccCCCchhhhhh-------cccCCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccc
Confidence            9999999999987       4567999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCC----ccccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHHHH
Q 045682          213 IPEG----ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       213 ~~~~----~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      ....    ....|...|.+|+...+.      +.|+++..+++++.+.      ...+++.....+....  +...++++
T Consensus       155 ~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~--p~~~s~~~  232 (337)
T d1o6la_         155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEA  232 (337)
T ss_dssp             SCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTSCHHH
T ss_pred             cccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCC--CccCCHHH
Confidence            5432    245678888888765543      3455555555554443      2333444555554433  23567889


Q ss_pred             HHHHHHcccCCCCCCCC-----HHHHHH
Q 045682          277 AHLIFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      .+|+..||++||.+||+     +.++++
T Consensus       233 ~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         233 KSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHhhccCCchhhcccccccHHHHHc
Confidence            99999999999999995     677754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.7e-43  Score=299.61  Aligned_cols=240  Identities=16%  Similarity=0.250  Sum_probs=183.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC----c
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ----I  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~----~  127 (309)
                      .++|...+.||+|+||+||+|.+  +++.||||.+....   ......|.+|+.+++.++||||+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            35688999999999999999998  79999999997643   334467999999999999999999999998654    3


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .|+||||+++|+|.+++.       ....+++.++..++.||+.||+|||   +.+|+||||||+|||++.++.++|+||
T Consensus        86 ~~lvmE~~~g~~L~~~~~-------~~~~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~  155 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVH-------TEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDF  155 (277)
T ss_dssp             EEEEEECCCEEEHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCC
T ss_pred             EEEEEECCCCCEehhhhc-------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehh
Confidence            789999999999999986       4567999999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCC-------ccccccccccccccccCC------CcccHHHHHHHHhhccc------ccccccccccCCCCCC-
Q 045682          208 SFSISIPEG-------ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCS-  267 (309)
Q Consensus       208 g~a~~~~~~-------~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~-  267 (309)
                      |++......       ....|...|.+|+...+.      +.|+++..++.++.+..      ..+++.....+...++ 
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~  235 (277)
T d1o6ya_         156 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS  235 (277)
T ss_dssp             TTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGG
T ss_pred             hhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCc
Confidence            988765332       234577788877765432      23334444444443322      2223333333332221 


Q ss_pred             -chHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHHH
Q 045682          268 -GKEQQLQAYAHLIFECVNESPVDRP-TMVDVAKKLKQMYR  306 (309)
Q Consensus       268 -~~~~~~~~l~~li~~Cl~~~P~~RP-t~~~l~~~L~~l~~  306 (309)
                       .....++++.+|+.+||++||++|| |+.++.+.|..+..
T Consensus       236 ~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         236 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred             hhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence             1124568899999999999999999 89999999988764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.1e-43  Score=304.27  Aligned_cols=230  Identities=15%  Similarity=0.234  Sum_probs=188.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||+||+|++  +|+.||||++...   .....+.+.+|+.+++.++|||||++++++.+++..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4688899999999999999998  7899999998653   2234577999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+++|+|..++.       ....+++..+..++.||+.||.|||   +++|+||||||+|||++.+|.+||+|||+|+.
T Consensus        84 E~~~gg~l~~~~~-------~~~~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~  153 (316)
T d1fota_          84 DYIEGGELFSLLR-------KSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKY  153 (316)
T ss_dssp             CCCCSCBHHHHHH-------HTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             eecCCcccccccc-------ccccccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceE
Confidence            9999999999987       5677899999999999999999999   99999999999999999999999999999988


Q ss_pred             cCCC-ccccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHHHHHHH
Q 045682          213 IPEG-ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       213 ~~~~-~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      .... ....|...|.+|+...+.      +.|+++..++.++.+.      ...+++..+..+....+  ...++++.++
T Consensus       154 ~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~l  231 (316)
T d1fota_         154 VPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKDL  231 (316)
T ss_dssp             CSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHH
T ss_pred             eccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC--CCCCHHHHHH
Confidence            7543 345677778777754432      3455555666555443      23344455555554332  3456789999


Q ss_pred             HHHcccCCCCCCC-----CHHHHHH
Q 045682          280 IFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      +.+||+.||.+||     |+.++++
T Consensus       232 i~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         232 LSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhhhCHHhccccchhhHHHHHc
Confidence            9999999999996     8888864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=300.64  Aligned_cols=233  Identities=15%  Similarity=0.146  Sum_probs=173.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+..+.||+|+||+||+|.+  +++.||||++....  .....++.+|+.++++++|||||++++++.+++..++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5788899999999999999998  78999999996543  2335789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      |+.+ ++.+++...     ....+++..+..++.||+.||.|||   +.+||||||||+|||++.++++||+|||+|+..
T Consensus        82 ~~~~-~~~~~~~~~-----~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~  152 (298)
T d1gz8a_          82 FLHQ-DLKKFMDAS-----ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF  152 (298)
T ss_dssp             CCSE-EHHHHHHHT-----TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHH
T ss_pred             ecCC-chhhhhhhh-----cccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceec
Confidence            9986 445454321     4567999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCc----cccccccccccccccCCCc-------ccHHHHHHHHhhcccccc------ccccc-----------------
Q 045682          214 PEGE----LLTGLRAFDLARLNEDDGY-------VALRDHVKKYFEEDRLNE------IIDPL-----------------  259 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~------~~~~~-----------------  259 (309)
                      ....    ...|...+.+++.......       |+++..++.++.+.....      .+...                 
T Consensus       153 ~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  232 (298)
T d1gz8a_         153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS  232 (298)
T ss_dssp             CCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             cCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccc
Confidence            4332    3356666666665443333       444444444444332110      00000                 


Q ss_pred             ---ccCCCCCC---c----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 ---IMGDRSCS---G----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ---~~g~~~~~---~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                         .....+..   .    ....+.++.+|+.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         233 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence               00000000   0    0123467899999999999999999999975

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=300.36  Aligned_cols=228  Identities=16%  Similarity=0.150  Sum_probs=170.2

Q ss_pred             ccCceeecCCeEEEEEEe--CCeEEEEEEecCCCch-----hHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           62 SEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPR-----MYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        62 ~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ..++||+|+||+||+|.+  +++.||||++......     ..+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            356899999999999998  7899999998654321     234688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +.++++..+..       ....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+|+...
T Consensus        82 ~~~~~~~~~~~-------~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~  151 (299)
T d1ua2a_          82 METDLEVIIKD-------NSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  151 (299)
T ss_dssp             CSEEHHHHHTT-------CCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             hcchHHhhhhh-------cccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccC
Confidence            99887776653       5677999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCc----cccccccccccccccCCC-------cccHHHHHHHHhhccccc------ccccc-------------------
Q 045682          215 EGE----LLTGLRAFDLARLNEDDG-------YVALRDHVKKYFEEDRLN------EIIDP-------------------  258 (309)
Q Consensus       215 ~~~----~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~------~~~~~-------------------  258 (309)
                      ...    ...|...|.+|+......       .|+++..+++++.+....      +.+..                   
T Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~  231 (299)
T d1ua2a_         152 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL  231 (299)
T ss_dssp             SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred             CCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhcc
Confidence            432    334666677776544333       344444444444432211      00000                   


Q ss_pred             ---cccCCCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 ---LIMGDRSCSGK----EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ---~~~g~~~~~~~----~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                         ......+..+.    ...++++.+|+.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             chhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence               00001111110    123577999999999999999999999975

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.3e-42  Score=305.58  Aligned_cols=230  Identities=14%  Similarity=0.156  Sum_probs=178.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHH---HHHHHhhccCCcceeeeeeeeeCCceE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCIN---NIVYASQMIHRCFFKLIGCCLETQIPI  129 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~---e~~~l~~l~h~niv~l~g~~~~~~~~~  129 (309)
                      ++|+..+.||+|+||.||+|++  +|+.||||++....   ......+.+   ++.+++.++|||||++++++.+++..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            5788999999999999999998  78999999985431   111223344   467777788999999999999999999


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      +||||+++|+|.+++.       ....+++..+..++.||+.||.|||   +.+||||||||+|||++.+|.+||+|||+
T Consensus        84 ivmE~~~gg~L~~~l~-------~~~~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGl  153 (364)
T d1omwa3          84 FILDLMNGGDLHYHLS-------QHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL  153 (364)
T ss_dssp             EEECCCCSCBHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTT
T ss_pred             EEEEecCCCcHHHHHH-------hcccccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeece
Confidence            9999999999999997       4567899999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCc--cccccccccccccccCCC-------cccHHHHHHHHhhcccccc---------cccccccCCCCCCchHH
Q 045682          210 SISIPEGE--LLTGLRAFDLARLNEDDG-------YVALRDHVKKYFEEDRLNE---------IIDPLIMGDRSCSGKEQ  271 (309)
Q Consensus       210 a~~~~~~~--~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~  271 (309)
                      |+......  ...|...|.+|+......       .|+++..++.++.+.....         +........  ...+..
T Consensus       154 a~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~  231 (364)
T d1omwa3         154 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDS  231 (364)
T ss_dssp             CEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCC--CCCCSS
T ss_pred             eeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC--CCCCCC
Confidence            98775543  456888888877654332       3444444455554432211         111112222  222235


Q ss_pred             HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 045682          272 QLQAYAHLIFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       272 ~~~~l~~li~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      .++++.+|+.+||+.||++|||     +.++++
T Consensus       232 ~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         232 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            6788999999999999999999     577753

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-42  Score=301.62  Aligned_cols=229  Identities=16%  Similarity=0.249  Sum_probs=182.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC---chhHHHHHHHHHHHh-hccCCcceeeeeeeeeCCceEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK---PRMYDCCINNIVYAS-QMIHRCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~h~niv~l~g~~~~~~~~~lv  131 (309)
                      ++|+..+.||+|+||+||+|.+  +++.||||++....   ....+.+..|..++. .++|||||++++++.+++..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5688899999999999999999  88999999986531   233456777777765 57999999999999999999999


Q ss_pred             EEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          132 FEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      |||+++|+|.+++.       ....+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++
T Consensus        82 mEy~~~g~L~~~i~-------~~~~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~  151 (320)
T d1xjda_          82 MEYLNGGDLMYHIQ-------SCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK  151 (320)
T ss_dssp             EECCTTCBHHHHHH-------HHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EeecCCCcHHHHhh-------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhh
Confidence            99999999999997       4567899999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCC----ccccccccccccccccCC------CcccHHHHHHHHhhcc------cccccccccccCCCCCCchHHHHHH
Q 045682          212 SIPEG----ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEED------RLNEIIDPLIMGDRSCSGKEQQLQA  275 (309)
Q Consensus       212 ~~~~~----~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~  275 (309)
                      .....    ....|...+.+|+.....      +.|+++..+++++.+.      ...+++..+..+....  +...+++
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~--p~~~s~~  229 (320)
T d1xjda_         152 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY--PRWLEKE  229 (320)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTSCHH
T ss_pred             hcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CccCCHH
Confidence            65432    245677777777665443      3455555555555443      2334444444454332  2355788


Q ss_pred             HHHHHHHcccCCCCCCCCHH-HHH
Q 045682          276 YAHLIFECVNESPVDRPTMV-DVA  298 (309)
Q Consensus       276 l~~li~~Cl~~~P~~RPt~~-~l~  298 (309)
                      +.+|+.+||+.||++|||+. +|+
T Consensus       230 ~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         230 AKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHhcccCCCCCcCHHHHHH
Confidence            99999999999999999995 664

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-41  Score=293.02  Aligned_cols=232  Identities=16%  Similarity=0.108  Sum_probs=175.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe-CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  134 (309)
                      ++|...+.||+|+||+||+|.+ +++.||||++....  ....+.+.+|+.+|++++||||+++++++..++..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4688889999999999999999 88999999997653  23357899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccccC
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP  214 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  214 (309)
                      +.++.+..+..       ....+++..+..++.||+.||+|||   +.+||||||||+|||++.++.+||+|||+|....
T Consensus        82 ~~~~~~~~~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~  151 (286)
T d1ob3a_          82 LDQDLKKLLDV-------CEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG  151 (286)
T ss_dssp             CSEEHHHHHHT-------STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             ehhhhHHHHHh-------hcCCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecc
Confidence            99877777754       5678999999999999999999999   8999999999999999999999999999997764


Q ss_pred             CC----ccccccccccccccccCC-------CcccHHHHHHHHhhcccccc------cccc-------------------
Q 045682          215 EG----ELLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNE------IIDP-------------------  258 (309)
Q Consensus       215 ~~----~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~~-------------------  258 (309)
                      ..    ....|..++.+++.....       +.|+++..+++++.+.....      .+..                   
T Consensus       152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  231 (286)
T d1ob3a_         152 IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL  231 (286)
T ss_dssp             C---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             cCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhh
Confidence            43    233455556655544333       34455555555544322110      0000                   


Q ss_pred             -----cccCCCCCC---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 -----LIMGDRSCS---GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 -----~~~g~~~~~---~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                           ......+.+   .....++.+.+|+.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 000000000   01133567899999999999999999999974

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-41  Score=295.44  Aligned_cols=229  Identities=15%  Similarity=0.179  Sum_probs=175.5

Q ss_pred             cCCCcc-CceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeee----CCceE
Q 045682           58 NNYDSE-KVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE----TQIPI  129 (309)
Q Consensus        58 ~~~~~~-~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~----~~~~~  129 (309)
                      ++|... ++||+|+||+||+|.+  +++.||||++...     ..+.+|+.++.++ +|||||++++++.+    +...|
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            568765 4699999999999998  7899999998653     4577899987766 89999999999865    45689


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC---CCcEEEee
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE---ENVAKLFD  206 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~---~~~~kl~D  206 (309)
                      +|||||++|+|.++|..     .....+++.++..++.||+.||+|||   +.+|+||||||+|||++.   ++.+||+|
T Consensus        86 ivmEy~~gg~L~~~i~~-----~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~D  157 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD  157 (335)
T ss_dssp             EEEECCCSEEHHHHHHS-----CSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred             EEEECCCCCcHHHHHHh-----cCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCccccccccccccccccccccccccc
Confidence            99999999999999962     12457999999999999999999999   999999999999999975   56799999


Q ss_pred             cccccccCCCc---cccccccccccccccCC------CcccHHHHHHHHhhcccc------c----ccccccccCCCCCC
Q 045682          207 FSFSISIPEGE---LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRL------N----EIIDPLIMGDRSCS  267 (309)
Q Consensus       207 fg~a~~~~~~~---~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~----~~~~~~~~g~~~~~  267 (309)
                      ||+|+......   ...|...+.+|+.....      +.|+++..++.++.+...      .    .+......+....+
T Consensus       158 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~  237 (335)
T d2ozaa1         158 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP  237 (335)
T ss_dssp             CTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCC
T ss_pred             cceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence            99998765433   45677777777765432      334444444444443321      1    12223333443333


Q ss_pred             --chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          268 --GKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       268 --~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                        .....++++.+|+.+||+.||++|||+.|+++
T Consensus       238 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         238 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence              22356788999999999999999999999975

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.2e-42  Score=302.27  Aligned_cols=230  Identities=17%  Similarity=0.183  Sum_probs=187.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC---CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS---KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  132 (309)
                      ++|+..+.||+|+||.||+|.+  +|+.||||++...   .....+.+.+|+.+|+.++|||||++++++.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4689999999999999999998  7899999998643   2234567899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                      ||+.+|+|.+++.       ....+++..+..++.||+.||.|||   +.+||||||||+|||++.++++||+|||+|+.
T Consensus       121 e~~~~g~l~~~l~-------~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~  190 (350)
T d1rdqe_         121 EYVAGGEMFSHLR-------RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             ECCTTCBHHHHHH-------HHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ccccccchhhhHh-------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeee
Confidence            9999999999986       4457999999999999999999999   99999999999999999999999999999988


Q ss_pred             cCCC-ccccccccccccccccCC------CcccHHHHHHHHhhccc------ccccccccccCCCCCCchHHHHHHHHHH
Q 045682          213 IPEG-ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDR------LNEIIDPLIMGDRSCSGKEQQLQAYAHL  279 (309)
Q Consensus       213 ~~~~-~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~l~~l  279 (309)
                      .... ....|...|.+|+...+.      +.|+++..++.++.+..      ..+++..+..+....  +...++++.+|
T Consensus       191 ~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~--p~~~s~~~~~l  268 (350)
T d1rdqe_         191 VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDLKDL  268 (350)
T ss_dssp             CSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTCCHHHHHH
T ss_pred             cccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCC--CccCCHHHHHH
Confidence            7543 356678888777765432      34555555555554432      233344444444332  23566889999


Q ss_pred             HHHcccCCCCCCC-----CHHHHHH
Q 045682          280 IFECVNESPVDRP-----TMVDVAK  299 (309)
Q Consensus       280 i~~Cl~~~P~~RP-----t~~~l~~  299 (309)
                      +.+||+.||.+|+     |+.+|++
T Consensus       269 i~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         269 LRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhhhCHHhccccccccHHHHHc
Confidence            9999999999994     8888874

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-42  Score=294.98  Aligned_cols=230  Identities=18%  Similarity=0.206  Sum_probs=178.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCc------hhHHHHHHHHHHHhhcc--CCcceeeeeeeeeCCc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKP------RMYDCCINNIVYASQMI--HRCFFKLIGCCLETQI  127 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~~~  127 (309)
                      ++|...+.||+|+||+||+|++  +++.||||++.....      ....++.+|+.++++++  |||||++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5688899999999999999998  789999999865321      12234678999999995  9999999999999999


Q ss_pred             eEEEEEeccC-CChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-CCcEEEe
Q 045682          128 PILVFEYINC-GSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-ENVAKLF  205 (309)
Q Consensus       128 ~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-~~~~kl~  205 (309)
                      .++||||+.+ +++.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++. ++.+||+
T Consensus        84 ~~lv~e~~~~~~~l~~~~~-------~~~~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~  153 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFIT-------ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLI  153 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHH-------HHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEEC
T ss_pred             EEEEEEeccCcchHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEEC
Confidence            9999999976 58888876       4567999999999999999999999   999999999999999985 4799999


Q ss_pred             ecccccccCCCc--cccccccccccccccCCCcccHHHHHH-------HHhhcccccccccccccCCCCCCchHHHHHHH
Q 045682          206 DFSFSISIPEGE--LLTGLRAFDLARLNEDDGYVALRDHVK-------KYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAY  276 (309)
Q Consensus       206 Dfg~a~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l  276 (309)
                      |||+|+......  ...|...+.+|+......+.+...++|       .++.+.....-.+....+....+  ...++++
T Consensus       154 DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~~~~~~--~~~s~~~  231 (273)
T d1xwsa_         154 DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR--QRVSSEC  231 (273)
T ss_dssp             CCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCS--SCCCHHH
T ss_pred             ccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhhcccCCC--CCCCHHH
Confidence            999998765443  345777777777544333333444444       44444332222222233332221  2456889


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHH
Q 045682          277 AHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       277 ~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                      .+|+.+||+.||++|||+.|+++
T Consensus       232 ~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         232 QHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHccCCHhHCcCHHHHhc
Confidence            99999999999999999999975

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-40  Score=292.32  Aligned_cols=232  Identities=11%  Similarity=0.114  Sum_probs=169.2

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC-chhHHHHHHHHHHHhhccCCcceeeeeeeeeCC----ceE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK-PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ----IPI  129 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~----~~~  129 (309)
                      +.+|...+.||+|+||+||+|.+  +++.||||++.... ....+.+.+|+.+|++++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            35688899999999999999998  79999999997653 344567999999999999999999999997643    235


Q ss_pred             EEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccc
Q 045682          130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF  209 (309)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~  209 (309)
                      ++++|+.+|+|.+++.        ...+++..+..++.|++.||+|||   +.+||||||||+|||++.++.+||+|||+
T Consensus        87 ~l~~~~~~g~L~~~l~--------~~~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~  155 (345)
T d1pmea_          87 YLVTHLMGADLYKLLK--------TQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGL  155 (345)
T ss_dssp             EEEEECCCEEHHHHHH--------HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEeecCCchhhhhh--------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCc
Confidence            5566777899999986        246999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCC-------ccccccccccccccccCCCcccHHHHHH-------HHhhccccccc------cccc----------
Q 045682          210 SISIPEG-------ELLTGLRAFDLARLNEDDGYVALRDHVK-------KYFEEDRLNEI------IDPL----------  259 (309)
Q Consensus       210 a~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~------~~~~----------  259 (309)
                      |......       ....|..++.+++.......++...++|       .++.+.....-      ....          
T Consensus       156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~  235 (345)
T d1pmea_         156 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE  235 (345)
T ss_dssp             CEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             eeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChh
Confidence            9866443       2334666777776543333334444444       43333211100      0000          


Q ss_pred             ----------------ccCCCCCCc---hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 ----------------IMGDRSCSG---KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ----------------~~g~~~~~~---~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                      .......+.   ....+.++.+|+..||+.||.+|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                            000000000   0122357899999999999999999999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-40  Score=282.81  Aligned_cols=232  Identities=13%  Similarity=0.115  Sum_probs=176.0

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeCCceEEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      ++|+..+.||+|+||+||+|++  +++.||||+++...  .....++.+|+.+|+.++||||+++++++.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4688889999999999999999  78999999986543  3456789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      ++.+++|..++.       ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||.|+..
T Consensus        82 ~~~~~~l~~~~~-------~~~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~  151 (292)
T d1unla_          82 FCDQDLKKYFDS-------CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAF  151 (292)
T ss_dssp             CCSEEHHHHHHH-------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eccccccccccc-------cccccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcc
Confidence            999999998876       5678899999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCc----cccccccccccccccC-------CCcccHHHHHHHHhhcccc-------cccccc-----------------
Q 045682          214 PEGE----LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRL-------NEIIDP-----------------  258 (309)
Q Consensus       214 ~~~~----~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-------~~~~~~-----------------  258 (309)
                      ....    ...+...+.+++....       .+.|+++..+++++.+...       .+.+..                 
T Consensus       152 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (292)
T d1unla_         152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             CSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             cCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhh
Confidence            5432    2223333333332222       2344455555554432211       000000                 


Q ss_pred             ----------cccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 ----------LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ----------~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                ..............++.+.+|+.+||+.||++|||+.||++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                      00000011111244577899999999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-40  Score=290.35  Aligned_cols=230  Identities=17%  Similarity=0.148  Sum_probs=166.1

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------ceEE
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------IPIL  130 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------~~~l  130 (309)
                      .|...++||+|+||+||+|++  +++.||||++......    ..+|+.+|++++||||+++++++....      ..++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            477788999999999999999  7899999999765422    347999999999999999999986432      3689


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeeccc
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSF  209 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~  209 (309)
                      ||||++++.+..+....    .....+++.++..++.||+.||+|||   +.+|+||||||+|||++.++ .+||+|||+
T Consensus        97 v~Ey~~~~~~~~l~~~~----~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~  169 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS  169 (350)
T ss_dssp             EEECCSEEHHHHHHHHH----HTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTT
T ss_pred             EEeccCCccHHHHHhhh----hccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccc
Confidence            99999875433332111    14567999999999999999999999   99999999999999999775 899999999


Q ss_pred             ccccCCCc---cccccccccccccccCC-------CcccHHHHHHHHhhccccc------ccccccc-------------
Q 045682          210 SISIPEGE---LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLN------EIIDPLI-------------  260 (309)
Q Consensus       210 a~~~~~~~---~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~------~~~~~~~-------------  260 (309)
                      ++......   ...|...+.+++.....       +.|+++..+++++.+....      +.+..+.             
T Consensus       170 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~  249 (350)
T d1q5ka_         170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE  249 (350)
T ss_dssp             CEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             hhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhh
Confidence            98765433   34466666666644333       3344454555554433211      0000000             


Q ss_pred             ------cCCCCC--------CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          261 ------MGDRSC--------SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       261 ------~g~~~~--------~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                            ....+.        ......++++.+|+.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  000000        001134577999999999999999999999985

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-40  Score=290.54  Aligned_cols=231  Identities=13%  Similarity=0.109  Sum_probs=168.4

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeeeCC------
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQ------  126 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  126 (309)
                      .+.|...+.||+|+||+||+|.+  +++.||||++...  .....+.+.+|+.+|++++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46788899999999999999998  7899999999764  2344567899999999999999999999997654      


Q ss_pred             ceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEee
Q 045682          127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFD  206 (309)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~D  206 (309)
                      ..++||||+ +++|..+++        ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+|++|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~--------~~~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~D  164 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMK--------HEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILD  164 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHH--------HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             eEEEEEecc-cccHHHHHH--------hccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhccccccccccc
Confidence            469999999 457887764        356999999999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCc-cccccccccccccccC-------CCcccHHHHHHHHhhccccccccc------c--------------
Q 045682          207 FSFSISIPEGE-LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNEIID------P--------------  258 (309)
Q Consensus       207 fg~a~~~~~~~-~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~--------------  258 (309)
                      ||+|+...... ...|...+.+|+...+       .+.|+++..++.++.+.....-.+      .              
T Consensus       165 fg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
T d1cm8a_         165 FGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ  244 (346)
T ss_dssp             CTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             ccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHh
Confidence            99998775432 3445666666664322       234555555555544332110000      0              


Q ss_pred             ---------------cccCCCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          259 ---------------LIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       259 ---------------~~~g~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                     ..............++++.+|+.+||+.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         245 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                           00000000000123467889999999999999999999985

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.3e-39  Score=283.06  Aligned_cols=226  Identities=14%  Similarity=0.142  Sum_probs=170.1

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeee--CCceEEEE
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLE--TQIPILVF  132 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~--~~~~~lv~  132 (309)
                      ++|...+.||+|+||+||+|++  +++.||||+++...   .+++.+|+.+|.++ .||||+++++++..  ....++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5688999999999999999998  78999999987543   46788999999999 59999999999874  35689999


Q ss_pred             EeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCC-cEEEeeccccc
Q 045682          133 EYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN-VAKLFDFSFSI  211 (309)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~  211 (309)
                      ||+.+++|..+.          ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++ .+||+|||+|.
T Consensus       112 e~~~~~~L~~~~----------~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~  178 (328)
T d3bqca1         112 EHVNNTDFKQLY----------QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  178 (328)
T ss_dssp             ECCCSCBGGGTT----------TSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCE
T ss_pred             eecCCCcHHHHh----------cCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccce
Confidence            999999998763          35899999999999999999999   99999999999999998655 69999999998


Q ss_pred             ccCCCc---cccccccccccccccCCCc-------ccHHHHHHHHhhccccccc--------------------------
Q 045682          212 SIPEGE---LLTGLRAFDLARLNEDDGY-------VALRDHVKKYFEEDRLNEI--------------------------  255 (309)
Q Consensus       212 ~~~~~~---~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--------------------------  255 (309)
                      ......   ...|...+.+|+.......       |+++..++.++.+......                          
T Consensus       179 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~  258 (328)
T d3bqca1         179 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK  258 (328)
T ss_dssp             ECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             eccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhh
Confidence            765443   3345566666665443333       3344343433332211000                          


Q ss_pred             --------ccccccC--------CCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          256 --------IDPLIMG--------DRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       256 --------~~~~~~g--------~~~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                              .......        ..........++++.+|+.+||+.||++|||+.|+++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         259 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             TTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    0000000        0011112234578999999999999999999999975

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-39  Score=280.73  Aligned_cols=232  Identities=15%  Similarity=0.157  Sum_probs=169.9

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCC--CchhHHHHHHHHHHHhhccCCcceeeeeeeee--------C
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDAS--KPRMYDCCINNIVYASQMIHRCFFKLIGCCLE--------T  125 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--------~  125 (309)
                      ++|+..+.||+|+||+||+|++  +++.||||++...  ......++.+|+.+|++++||||+++++++..        .
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            6788899999999999999998  7899999998654  23445778999999999999999999998855        3


Q ss_pred             CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEe
Q 045682          126 QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF  205 (309)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~  205 (309)
                      +..++||||+.++.+..+..       ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~-------~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~  159 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSN-------VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLA  159 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTC-------TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             ceEEEEEeccCCCccchhhh-------cccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEee
Confidence            45799999999877765543       5667899999999999999999999   9999999999999999999999999


Q ss_pred             ecccccccCCCc--------cccccccccccccccCC-------CcccHHHHHHHHhhcccccc------ccc---ccc-
Q 045682          206 DFSFSISIPEGE--------LLTGLRAFDLARLNEDD-------GYVALRDHVKKYFEEDRLNE------IID---PLI-  260 (309)
Q Consensus       206 Dfg~a~~~~~~~--------~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~---~~~-  260 (309)
                      |||++.......        ...|...|.+|+.....       +.|+++..+++++.+.....      .+.   ... 
T Consensus       160 dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~  239 (318)
T d3blha1         160 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG  239 (318)
T ss_dssp             CCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             ecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcC
Confidence            999997664322        23456666666643332       34455555555544432211      000   000 


Q ss_pred             --------------------cCCCCCCch------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          261 --------------------MGDRSCSGK------EQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       261 --------------------~g~~~~~~~------~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                          .........      ...++++.+|+.+||+.||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         240 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             CCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence                                000000000      012456789999999999999999999975

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-39  Score=278.01  Aligned_cols=234  Identities=14%  Similarity=0.167  Sum_probs=170.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--C-CeEEEEEEecCCC--chhHHHHHHHHHHHhhc---cCCcceeeeeeeee----
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--Q-ERLISVMKFDASK--PRMYDCCINNIVYASQM---IHRCFFKLIGCCLE----  124 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~----  124 (309)
                      .++|+..+.||+|+||+||+|.+  + ++.||||++....  ......+.+|+.+++.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46799999999999999999998  3 5779999985532  22234566788877766   79999999999853    


Q ss_pred             -CCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEE
Q 045682          125 -TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK  203 (309)
Q Consensus       125 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~k  203 (309)
                       ....+++|||+.++++.....      .....+++..+..++.|++.||+|||   +.+||||||||+|||++.++.+|
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~------~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~k  156 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK------VPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIK  156 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH------SCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEE
T ss_pred             cCceEEEEEEeccCCchhhhhh------ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCee
Confidence             346799999999877765543      24567899999999999999999999   99999999999999999999999


Q ss_pred             EeecccccccCCCc---cccccccccccccccCC------CcccHHHHHHHHhhcccccc------ccccc---------
Q 045682          204 LFDFSFSISIPEGE---LLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRLNE------IIDPL---------  259 (309)
Q Consensus       204 l~Dfg~a~~~~~~~---~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~---------  259 (309)
                      |+|||+++......   ...|+..|.+|+.....      +.|+++..+++++.+.....      .+..+         
T Consensus       157 l~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  236 (305)
T d1blxa_         157 LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE  236 (305)
T ss_dssp             ECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred             ecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCch
Confidence            99999988764432   45677777777754432      33444445555544332110      00000         


Q ss_pred             -------------ccCCCCC---CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 -------------IMGDRSC---SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 -------------~~g~~~~---~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                   .......   ......++.+.+|+.+||+.||++|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                         0000000   001134577899999999999999999999975

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-39  Score=284.14  Aligned_cols=232  Identities=13%  Similarity=0.124  Sum_probs=168.8

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeeeC-----Cc
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLET-----QI  127 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~  127 (309)
                      .++|+..+.||+|+||+||+|++  +++.||||++....  ....+++.+|+.+|++++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            46799999999999999999998  79999999997653  34456789999999999999999999998643     34


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .+++++|+.+|+|.+++.        ...+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+|++||
T Consensus        97 ~~~i~~~~~gg~L~~~~~--------~~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~df  165 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVK--------CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF  165 (348)
T ss_dssp             CCEEEEECCSEEHHHHHT--------TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             eEEEEEeecCCchhhhcc--------cccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCcccccccccccccccc
Confidence            467788888999999984        456999999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCc-cccccccccccccccC-------CCcccHHHHHHHHhhcccccc------ccccccc--C---------
Q 045682          208 SFSISIPEGE-LLTGLRAFDLARLNED-------DGYVALRDHVKKYFEEDRLNE------IIDPLIM--G---------  262 (309)
Q Consensus       208 g~a~~~~~~~-~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--g---------  262 (309)
                      |++....... ...|...+.+++....       .+.|+++..++.++.+.....      ....+..  +         
T Consensus       166 g~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~  245 (348)
T d2gfsa1         166 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK  245 (348)
T ss_dssp             ----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred             chhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence            9987654332 2334444444443332       244555555555544332210      0000000  0         


Q ss_pred             --------------CCCCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          263 --------------DRSCSG----KEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       263 --------------~~~~~~----~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                                    ..+...    ....++++.+|+.+||+.||++|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         246 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             CCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence                          000000    0123467899999999999999999999985

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.1e-38  Score=272.00  Aligned_cols=238  Identities=16%  Similarity=0.153  Sum_probs=173.2

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceee-eeeeeeCCceEEEEEe
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKL-IGCCLETQIPILVFEY  134 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l-~g~~~~~~~~~lv~e~  134 (309)
                      ++|+..+.||+|+||.||+|++  +++.||||.+....  ...++..|+++++.++|+|++.. .++..+.+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            5688999999999999999998  78999999876643  22457889999999977765555 4555677788999999


Q ss_pred             ccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeec---CCCcEEEeeccccc
Q 045682          135 INCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFN---EENVAKLFDFSFSI  211 (309)
Q Consensus       135 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~a~  211 (309)
                      +.+ +|.+.+..      ....+++..+..++.|++.||+|||   +++||||||||+|||++   .+..+||+|||+|+
T Consensus        85 ~~~-~l~~~~~~------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~  154 (299)
T d1ckia_          85 LGP-SLEDLFNF------CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  154 (299)
T ss_dssp             CCC-BHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCE
T ss_pred             cCC-chhhhhhh------ccCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcce
Confidence            954 66666541      4567999999999999999999999   99999999999999985   45679999999998


Q ss_pred             ccCCC-----------ccccccccccccccccCC------CcccHHHHHHHHhhcccccccccc------c---ccCCCC
Q 045682          212 SIPEG-----------ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRLNEIIDP------L---IMGDRS  265 (309)
Q Consensus       212 ~~~~~-----------~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~---~~g~~~  265 (309)
                      .....           ....|...|.+|+...+.      +.|+++..+++++.+.....-...      .   ......
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~  234 (299)
T d1ckia_         155 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS  234 (299)
T ss_dssp             ECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHH
T ss_pred             eccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCC
Confidence            76432           234577777777654332      334455555555443322110000      0   000000


Q ss_pred             CCc---hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 045682          266 CSG---KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS  307 (309)
Q Consensus       266 ~~~---~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~  307 (309)
                      .+.   ...+++++.+++..||+.+|++||++.+|.+.|+.+...
T Consensus       235 ~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         235 TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             SCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            000   113457899999999999999999999999999887653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-39  Score=282.66  Aligned_cols=232  Identities=16%  Similarity=0.167  Sum_probs=178.3

Q ss_pred             cCCCccCceeecCCeEEEEEEe-----CCeEEEEEEecCCC----chhHHHHHHHHHHHhhccC-CcceeeeeeeeeCCc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASK----PRMYDCCINNIVYASQMIH-RCFFKLIGCCLETQI  127 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h-~niv~l~g~~~~~~~  127 (309)
                      ++|+..+.||+|+||+||+|..     +|+.||||.+....    ....+.+.+|++++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688999999999999999986     47899999986532    2334668899999999966 899999999999999


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .+++|||+.+|+|.+++.       ....+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       104 ~~~v~e~~~~~~L~~~i~-------~~~~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DF  173 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLS-------QRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDF  173 (322)
T ss_dssp             EEEEECCCCSCBHHHHHH-------HHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCS
T ss_pred             eeeeeecccccHHHHHHH-------hcccccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeec
Confidence            999999999999999987       4567788999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCc-----cccccccccccccccC--------CCcccHHHHHHHHhhcccc------cccccccccC--CCCC
Q 045682          208 SFSISIPEGE-----LLTGLRAFDLARLNED--------DGYVALRDHVKKYFEEDRL------NEIIDPLIMG--DRSC  266 (309)
Q Consensus       208 g~a~~~~~~~-----~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g--~~~~  266 (309)
                      |+|+......     ...|..++.+++....        .+.|+++..++.++.+...      .+.......+  ...+
T Consensus       174 G~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~  253 (322)
T d1vzoa_         174 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP  253 (322)
T ss_dssp             SEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC
T ss_pred             cchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCC
Confidence            9998764332     3445666655554322        2445555555555443322      1111111111  0111


Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 045682          267 SGKEQQLQAYAHLIFECVNESPVDRPT-----MVDVAK  299 (309)
Q Consensus       267 ~~~~~~~~~l~~li~~Cl~~~P~~RPt-----~~~l~~  299 (309)
                      ..+...++++.+|+.+||++||.+|||     ++|+++
T Consensus       254 ~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            222356789999999999999999995     777764

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.8e-37  Score=267.60  Aligned_cols=240  Identities=12%  Similarity=0.089  Sum_probs=179.9

Q ss_pred             hcCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-CCcceeeeeeeeeCCceEEEEE
Q 045682           57 TNNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-HRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        57 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      .++|...+.||+|+||+||+|++  +++.||||.+....  ....+.+|++.+..+. |+|++.+++++..+...++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            35788999999999999999998  78999999886543  2245778899999995 5899999999999999999999


Q ss_pred             eccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecC-----CCcEEEeecc
Q 045682          134 YINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNE-----ENVAKLFDFS  208 (309)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~-----~~~~kl~Dfg  208 (309)
                      |+ +++|.+++..      ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.     ++.+||+|||
T Consensus        82 ~~-~~~l~~~~~~------~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG  151 (293)
T d1csna_          82 LL-GPSLEDLLDL------CGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  151 (293)
T ss_dssp             CC-CCBHHHHHHH------TTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             ec-CCCHHHHHHh------hccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccc
Confidence            99 5799999862      3457999999999999999999999   999999999999999964     5789999999


Q ss_pred             cccccCCC-----------ccccccccccccccccCC------CcccHHHHHHHHhhccccccc---------ccccccC
Q 045682          209 FSISIPEG-----------ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRLNEI---------IDPLIMG  262 (309)
Q Consensus       209 ~a~~~~~~-----------~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g  262 (309)
                      +|+.....           ....|...|.+|+...+.      +.|+++..++.++.+.....-         ...+...
T Consensus       152 ~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~  231 (293)
T d1csna_         152 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK  231 (293)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred             eeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhc
Confidence            99875332           134577778777755432      334444444444433221110         0000000


Q ss_pred             CCCCCc---hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 045682          263 DRSCSG---KEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRSC  308 (309)
Q Consensus       263 ~~~~~~---~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~~L~~l~~~~  308 (309)
                      ....+.   ...+++++.+++..||+.+|++||++..+.+.|+++.+..
T Consensus       232 ~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         232 KQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             HHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             cCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence            000000   0134578999999999999999999999999998887653

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=274.76  Aligned_cols=229  Identities=14%  Similarity=0.129  Sum_probs=163.5

Q ss_pred             cCCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCC--chhHHHHHHHHHHHhhccCCcceeeeeeeee------CCc
Q 045682           58 NNYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASK--PRMYDCCINNIVYASQMIHRCFFKLIGCCLE------TQI  127 (309)
Q Consensus        58 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~------~~~  127 (309)
                      ++|...++||+|+||+||+|.+  +|+.||||++....  .....++.+|+.++++++||||+++++++..      ...
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5688899999999999999998  79999999997643  3445678999999999999999999999864      357


Q ss_pred             eEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCcEEEeec
Q 045682          128 PILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF  207 (309)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  207 (309)
                      .|+||||+.++.+ +.+         ...+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+|++||
T Consensus        97 ~~iv~Ey~~~~l~-~~~---------~~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df  163 (355)
T d2b1pa1          97 VYLVMELMDANLC-QVI---------QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF  163 (355)
T ss_dssp             EEEEEECCSEEHH-HHH---------TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             eEEEEeccchHHH-Hhh---------hcCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeech
Confidence            8999999987544 443         245899999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCc---cccccccccccccccC------CCcccHHHHHHHHhhccccccc------cccc-------------
Q 045682          208 SFSISIPEGE---LLTGLRAFDLARLNED------DGYVALRDHVKKYFEEDRLNEI------IDPL-------------  259 (309)
Q Consensus       208 g~a~~~~~~~---~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~-------------  259 (309)
                      |+++......   ...|...+.+|+...+      .+.|+++..++.++.+......      ....             
T Consensus       164 ~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~  243 (355)
T d2b1pa1         164 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK  243 (355)
T ss_dssp             CC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             hhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHH
Confidence            9987765432   3345555555554332      2345555555555444322100      0000             


Q ss_pred             ---------ccCC----------------CCC--CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045682          260 ---------IMGD----------------RSC--SGKEQQLQAYAHLIFECVNESPVDRPTMVDVAK  299 (309)
Q Consensus       260 ---------~~g~----------------~~~--~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~~  299 (309)
                               ..+.                .+.  ......++++.+|+.+||+.||++|||++||++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             TSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                     0000                000  012245678999999999999999999999974

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1e-31  Score=238.21  Aligned_cols=234  Identities=13%  Similarity=0.082  Sum_probs=163.6

Q ss_pred             CCCccCceeecCCeEEEEEEe--CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc-----------CCcceeeeeeeeeC
Q 045682           59 NYDSEKVIMKRSFYTLYKGFC--QERLISVMKFDASKPRMYDCCINNIVYASQMI-----------HRCFFKLIGCCLET  125 (309)
Q Consensus        59 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~g~~~~~  125 (309)
                      .|...++||+|+||+||+|+.  +|+.||||+++... ...+.+.+|+.+++.++           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            488899999999999999998  78999999997653 33467889999988875           57899999888653


Q ss_pred             --CceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc--
Q 045682          126 --QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV--  201 (309)
Q Consensus       126 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~--  201 (309)
                        ...+++++++..+.........    .....+++..+..++.||+.||.|||+  ..+|+||||||+|||++.++.  
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~  166 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKK----YEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPE  166 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHH----TTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTT
T ss_pred             cccceeeeeeeccccccccccccc----ccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCccc
Confidence              4566677776555333332211    256778999999999999999999993  389999999999999986653  


Q ss_pred             ----EEEeecccccccCCC-ccccccccccccccccCC------CcccHHHHHHHHhhcccccccc--------------
Q 045682          202 ----AKLFDFSFSISIPEG-ELLTGLRAFDLARLNEDD------GYVALRDHVKKYFEEDRLNEII--------------  256 (309)
Q Consensus       202 ----~kl~Dfg~a~~~~~~-~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------------  256 (309)
                          ++++|||.|...... ....|...+.+|+.....      +.|+++..++.++.+.......              
T Consensus       167 ~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         167 NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             TEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             ccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence                999999998765433 244466666666644332      2344444444443322110000              


Q ss_pred             -----------------------c-----ccccCCC----------CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045682          257 -----------------------D-----PLIMGDR----------SCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVA  298 (309)
Q Consensus       257 -----------------------~-----~~~~g~~----------~~~~~~~~~~~l~~li~~Cl~~~P~~RPt~~~l~  298 (309)
                                             +     .......          ........+.++.+|+.+||..||.+|||++|++
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L  326 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV  326 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence                                   0     0000000          1111245678899999999999999999999997


Q ss_pred             H
Q 045682          299 K  299 (309)
Q Consensus       299 ~  299 (309)
                      +
T Consensus       327 ~  327 (362)
T d1q8ya_         327 N  327 (362)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=3.5e-25  Score=178.24  Aligned_cols=132  Identities=14%  Similarity=0.112  Sum_probs=104.0

Q ss_pred             CccCceeecCCeEEEEEEe-CCeEEEEEEecCCCc------------------hhHHHHHHHHHHHhhccCCcceeeeee
Q 045682           61 DSEKVIMKRSFYTLYKGFC-QERLISVMKFDASKP------------------RMYDCCINNIVYASQMIHRCFFKLIGC  121 (309)
Q Consensus        61 ~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~niv~l~g~  121 (309)
                      ..++.||+|+||+||+|.. +|+.||||.++....                  ........|+..+.++.|++++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            4578899999999999998 899999998753210                  011234568889999999999988765


Q ss_pred             eeeCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeCCCCCCCeeecCCCc
Q 045682          122 CLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV  201 (309)
Q Consensus       122 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiH~dlkp~Nill~~~~~  201 (309)
                      .    ..+++|||+++..+.++              +......++.|++.++.|||   ..+|+||||||+|||++++ .
T Consensus        83 ~----~~~lvme~~~~~~~~~l--------------~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~  140 (191)
T d1zara2          83 E----GNAVLMELIDAKELYRV--------------RVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-G  140 (191)
T ss_dssp             E----TTEEEEECCCCEEGGGC--------------CCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-E
T ss_pred             c----CCEEEEEeeccccccch--------------hhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-C
Confidence            3    23799999998665543              22334679999999999999   8999999999999999965 4


Q ss_pred             EEEeecccccccC
Q 045682          202 AKLFDFSFSISIP  214 (309)
Q Consensus       202 ~kl~Dfg~a~~~~  214 (309)
                      ++|+|||+|....
T Consensus       141 ~~liDFG~a~~~~  153 (191)
T d1zara2         141 IWIIDFPQSVEVG  153 (191)
T ss_dssp             EEECCCTTCEETT
T ss_pred             EEEEECCCcccCC
Confidence            8999999986543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.95  E-value=2.1e-09  Score=88.78  Aligned_cols=149  Identities=15%  Similarity=-0.008  Sum_probs=102.5

Q ss_pred             HHHHHhcCCCccCceeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEE
Q 045682           52 ELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPIL  130 (309)
Q Consensus        52 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  130 (309)
                      ++......|...+..+.++.+.||+...++..+.+|+...........+..|...+..+ .+--+++++.+...++..++
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence            44444455655555444555789998777888889987665434444577888888877 35456788888888888999


Q ss_pred             EEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------
Q 045682          131 VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG-------------------------------  179 (309)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-------------------------------  179 (309)
                      ||+++++.++.+...       .  ...   ...++.+++..++.||..                               
T Consensus        88 v~~~l~G~~~~~~~~-------~--~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (263)
T d1j7la_          88 LMSEADGVLCSEEYE-------D--EQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDC  155 (263)
T ss_dssp             EEECCSSEEHHHHTT-------T--CSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCG
T ss_pred             EEEeccccccccccc-------c--ccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhh
Confidence            999999988765431       0  011   223455555556666531                               


Q ss_pred             -------------------------CCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          180 -------------------------FPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       180 -------------------------~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                                               ....++|+|+.|.||++++++.+-|+||+.+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         156 ENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             GGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             hcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                     022379999999999999877778999997753

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.32  E-value=2e-06  Score=69.94  Aligned_cols=129  Identities=13%  Similarity=0.013  Sum_probs=83.3

Q ss_pred             eeecC-CeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhcc--CCcceeeeeeeeeCCceEEEEEeccCCChh
Q 045682           66 IMKRS-FYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMI--HRCFFKLIGCCLETQIPILVFEYINCGSLA  141 (309)
Q Consensus        66 lg~G~-~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~~~~~lv~e~~~~gsL~  141 (309)
                      +..|. .+.||+... .+..+.+|.......   ..+..|+..+..+.  .-.+++++++..+++..++||++++|.++.
T Consensus        18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             CSCTTSSCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             cCCcccCCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            34444 367999888 556678887654432   34667888887773  334677888888888899999999886654


Q ss_pred             hhhhhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-------------------------------------------
Q 045682          142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHV-------------------------------------------  178 (309)
Q Consensus       142 ~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-------------------------------------------  178 (309)
                      +..            ...   ...+.+++..|+-||.                                           
T Consensus        95 ~~~------------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (255)
T d1nd4a_          95 SSH------------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA  159 (255)
T ss_dssp             TSC------------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred             ccc------------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHH
Confidence            321            000   1112223333333331                                           


Q ss_pred             ------------CCCCCeEeCCCCCCCeeecCCCcEEEeecccccc
Q 045682          179 ------------GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS  212 (309)
Q Consensus       179 ------------~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  212 (309)
                                  .....++|+|+.|.||+++.+..+-|+||+.+..
T Consensus       160 ~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         160 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence                        0123479999999999999877788999997753

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.27  E-value=2.9e-06  Score=73.88  Aligned_cols=74  Identities=11%  Similarity=0.092  Sum_probs=48.8

Q ss_pred             CceeecCCeEEEEEEe--CCeEEEEEEecCC------C-chhHHHHHHHHHHHhhc-cC--CcceeeeeeeeeCCceEEE
Q 045682           64 KVIMKRSFYTLYKGFC--QERLISVMKFDAS------K-PRMYDCCINNIVYASQM-IH--RCFFKLIGCCLETQIPILV  131 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~-~~~~~~~~~e~~~l~~l-~h--~niv~l~g~~~~~~~~~lv  131 (309)
                      +.||.|....||+...  .++.++||.-...      . +....+...|+..|..+ .+  ..+++++.+  ++...++|
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence            3689999999999987  4678999964321      1 11234456688888776 33  345666654  44566899


Q ss_pred             EEeccCCC
Q 045682          132 FEYINCGS  139 (309)
Q Consensus       132 ~e~~~~gs  139 (309)
                      ||++++..
T Consensus       110 mE~L~~~~  117 (392)
T d2pula1         110 MEDLSHLK  117 (392)
T ss_dssp             ECCCTTSE
T ss_pred             EeccCCcc
Confidence            99998754

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.45  E-value=0.00021  Score=61.70  Aligned_cols=72  Identities=14%  Similarity=-0.009  Sum_probs=48.6

Q ss_pred             CceeecCCeEEEEEEe-CC--------eEEEEEEecCCCchhHHHHHHHHHHHhhc-cCCcceeeeeeeeeCCceEEEEE
Q 045682           64 KVIMKRSFYTLYKGFC-QE--------RLISVMKFDASKPRMYDCCINNIVYASQM-IHRCFFKLIGCCLETQIPILVFE  133 (309)
Q Consensus        64 ~~lg~G~~g~V~~~~~-~~--------~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  133 (309)
                      +.|+.|-.-.+|++.. ++        ..|.++... ..... -...+|..+++.+ .+.-.+++++++.+    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~-idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETE-SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCH-HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccchh-hHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            4578888889999987 22        446666554 32222 3455899999988 45545688887753    68999


Q ss_pred             eccCCChh
Q 045682          134 YINCGSLA  141 (309)
Q Consensus       134 ~~~~gsL~  141 (309)
                      |+++.++.
T Consensus       122 fi~g~~l~  129 (395)
T d1nw1a_         122 YIPSRPLS  129 (395)
T ss_dssp             CCCEEECC
T ss_pred             EeccccCC
Confidence            99875443

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.00027  Score=59.31  Aligned_cols=140  Identities=13%  Similarity=0.105  Sum_probs=78.8

Q ss_pred             CeEEEEEEe-CCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcce--eeee-----eeeeCCceEEEEEeccCCChh-
Q 045682           71 FYTLYKGFC-QERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF--KLIG-----CCLETQIPILVFEYINCGSLA-  141 (309)
Q Consensus        71 ~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv--~l~g-----~~~~~~~~~lv~e~~~~gsL~-  141 (309)
                      --.||++.. +|..+++|...... ...+++..|+..+..|....+.  ....     ....++..+.++++++|..+. 
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             cceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            358999998 88889999876542 2346788899988888433332  2211     123455678899999874332 


Q ss_pred             ----hhhhh-------h----CCCCCCCCCCCHH----------------------HHHHHHHHHHHHHHHh-hcCCCCC
Q 045682          142 ----DRIRI-------Q----HNPQPQHEPLLLT----------------------HRLKIAKDIANAIAYL-HVGFPRP  183 (309)
Q Consensus       142 ----~~l~~-------~----~~~~~~~~~l~~~----------------------~~~~i~~~ia~~l~yL-H~~~~~~  183 (309)
                          .+-..       |    ..+......+++.                      .....+.++...+.-+ ......+
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                11100       0    0111111122221                      1122223333332222 1222457


Q ss_pred             eEeCCCCCCCeeecCCCcEEEeeccccccc
Q 045682          184 VIFRDFKLSNILFNEENVAKLFDFSFSISI  213 (309)
Q Consensus       184 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  213 (309)
                      +||+|+.+.|||++++  ..++||+-+...
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~g  221 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARNG  221 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCEE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhcccC
Confidence            8999999999999743  458999977643

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.31  E-value=0.00058  Score=56.75  Aligned_cols=162  Identities=12%  Similarity=0.096  Sum_probs=86.5

Q ss_pred             ccHHHHHHHhcCCCccCcee-----ecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcce--eee-
Q 045682           48 FSAKELEIATNNYDSEKVIM-----KRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF--KLI-  119 (309)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~lg-----~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv--~l~-  119 (309)
                      .+.+++.....+|..++...     .|---+.|....++..+++|+.....  ..+.+..|+.++..+...++.  ... 
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~   80 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP   80 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCcEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccce
Confidence            56778888888888766543     45456789988866679999876532  123344566677776433322  111 


Q ss_pred             ---e--eeeeCCceEEEEEeccCCChhhhh-----------h---hhCCCCCCCC--CCCHH------------------
Q 045682          120 ---G--CCLETQIPILVFEYINCGSLADRI-----------R---IQHNPQPQHE--PLLLT------------------  160 (309)
Q Consensus       120 ---g--~~~~~~~~~lv~e~~~~gsL~~~l-----------~---~~~~~~~~~~--~l~~~------------------  160 (309)
                         |  +..-.+....++.+..+......-           .   ..........  .....                  
T Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (316)
T d2ppqa1          81 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK  160 (316)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred             ecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcch
Confidence               1  112244566677776653332110           0   0000000000  00000                  


Q ss_pred             HHHHHHHHHHHHHHHhhc-CCCCCeEeCCCCCCCeeecCCCcEEEeeccccc
Q 045682          161 HRLKIAKDIANAIAYLHV-GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI  211 (309)
Q Consensus       161 ~~~~i~~~ia~~l~yLH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~  211 (309)
                      .....+..+...+.-.+. .-..++||+|+.+.||+++.+...-|.||+.+.
T Consensus       161 ~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         161 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            111222223333333331 125689999999999999988888899999774

>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Actin-fragmin kinase, catalytic domain
domain: Actin-fragmin kinase, catalytic domain
species: Physarum polycephalum [TaxId: 5791]

Probab=90.48  E-value=1.5  Score=35.24  Aligned_cols=132  Identities=10%  Similarity=0.009  Sum_probs=77.7

Q ss_pred             eeecCCeEEEEEEeCCeEEEEEEecCCCchhHHHHHHHHHHHhhccCCcceeeeeeee----------------------
Q 045682           66 IMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCL----------------------  123 (309)
Q Consensus        66 lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~----------------------  123 (309)
                      +.++|.+-|+-+..++..+++|.-.   ....+.|..++...-.+.-|...-+. .+.                      
T Consensus        76 ~s~~Gs~Gv~FV~~e~gaiVlK~s~---tta~E~y~~eLAr~LGvpvPqmRvI~-~~~~E~~~~~~~~l~~~e~d~~I~s  151 (342)
T d1cjaa_          76 RSEKGTEGLFFVETESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVITT  151 (342)
T ss_dssp             ECCSTTSCEEEEEESSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHHH
T ss_pred             EeecCCceEEEEEcCCceEEEecCC---chHHHHHHHHHHHHhCCCCCceEEec-CCCHHHHHHHHHHhcCCChhHHHHH
Confidence            3455555555555577777788632   24446677777766667777755432 111                      


Q ss_pred             -eCCceEEEEEeccCCChhhhhhhhCCCCCCCCCCCHHHHHHHHHH---HHHHHHHhhcCCCCCeEeCC-CCCCCeeecC
Q 045682          124 -ETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD---IANAIAYLHVGFPRPVIFRD-FKLSNILFNE  198 (309)
Q Consensus       124 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~---ia~~l~yLH~~~~~~iiH~d-lkp~Nill~~  198 (309)
                       -....+++|||.+|.+|.+.-         ....+.....+.+.+   |+--=.++++....++++|+ =.+.|++++.
T Consensus       152 el~~A~~liMeYvpG~~l~e~~---------~~~a~~~fs~~~l~~LGkIiaFDifInN~DR~PL~Wrn~GN~~Niml~~  222 (342)
T d1cjaa_         152 LANQANILLMELVRGITLNKLT---------TTSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSE  222 (342)
T ss_dssp             HTTCSEEEEEECCCEEESTTCC---------SSSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEES
T ss_pred             HHhcccceeeeccCCccccccc---------cccchhhhcHHHHHHhhhHHHHHHHHcCCccccccccCCCCccceEEec
Confidence             123578999999987776651         111111111222333   33333467766566778874 3889999987


Q ss_pred             CC-cEEEeecccc
Q 045682          199 EN-VAKLFDFSFS  210 (309)
Q Consensus       199 ~~-~~kl~Dfg~a  210 (309)
                      ++ .+..+|=|..
T Consensus       223 n~~~~~~IDs~i~  235 (342)
T d1cjaa_         223 RGATVVPIDSKII  235 (342)
T ss_dssp             BTTCEEECSCCCC
T ss_pred             CCcEEEEecCCcc
Confidence            76 6778886655