Citrus Sinensis ID: 045692

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420----
MGGCCSIEVKYGSVYEEEEMERKDNYNNKKIGGEDDFVRVGDNGASVRLQGSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKPLLTKSKSDTSYCSSISQVSYPHAAGSRSMRSQATETELSVALKGVSRVNSLVKLPRFARGLSRRRSGNRFEDIAG
cccccccccccccccHHHHHHHHHccccccccccccccccccccccEEEcccccEEEEEEEccccccccccEEEEcccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEccccEEEEEEEcccccEEEEccccccccccHHHHHHHHHcccEEEcccccccccEEcccccccccHHHHHcccccccccccEEEccEEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccc
cccEEEccccccccEcccccccccccccccccccccccccccccccEEcccccEEEEEEEcccccccccHHHEEEccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEcccEEEEEEcccccEEEEEcccccEEEEEEEEcccccccHHHHHHHHHcccEEEEcccccccEEEEccccccccHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEccccHEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccHHHHHccccccHHHHccHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHcc
mggccsievkygsvyeeeemerkdnynnkkiggeddfvrvgdngasvrlqgssknISMFTQQGRKGINQDAMTVWenftgdkdtvfcgvfdghgpaghkIARHVRDNLPSKLSTAIKLLKRnhedysngskssqnpFFRALEASLVKAYEELDDELGLASavdsyssgaTAVNIIKKGEHLIIANLGdsravlctrddrnqlvpvqlttdlkpeIASEAERIRNCKgrvfamdeepdvyrvwmpdedcpglAMARAFGDfclkdyglisipeisyrkltreDQFVVLATDgvwdvltnsEVIRTVACASKKEMAAKMLVSRAVRAWrtkypgskiddCAAICLFlghkplltksksdtsycssisqvsyphaagsrsmrsqATETELSVALKGvsrvnslvklprfarglsrrrsgnrfediag
mggccsievkygsvyeeeemerkdnynnkkiggeddfvrVGDNGASvrlqgssknismFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIarhvrdnlpSKLSTAIKLLKRNHedysngskssqnpfFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLctrddrnqlvpvqlttdlkpeiaseaerirnckgrvfamdeepdVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATdgvwdvltnsEVIRTVACASKKEMAAKMLVSRAVRAWRtkypgskidDCAAICLFLGHKPLLTKSKSDTSYCSSISqvsyphaagsrSMRSQATETELSValkgvsrvnslvklprfarglsrrrsgnrfediag
MGGCCSIEVKYGSVYEEEEMERKDNYNNKKIGGEDDFVRVGDNGASVRLQGSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKPLLTKSKSDTSYCSSISQVSYPHAAGSRSMRSQATETELSVALKGVSRVNSLVKLPRFARGLSRRRSGNRFEDIAG
***CCSIEVKYGSV***************************************************GINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRD******************************FFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKPLLT********************************************VNSLVK**********************
***************************************************SSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLK***********SSQNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLF********************************************************************************
MGGCCSIEVKYGSVYEEEEMERKDNYNNKKIGGEDDFVRVGDNGASVRLQGSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNH**********QNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKPLLTKSKSDTSYCSSISQV*******************LSVALKGVSRVNSLVKLPRFARGLSRRRSG********
********************************************ASVRLQGSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLK*************QNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHK*************************************ELSVALKGVSRVNSLVKLPRFA*****************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGGCCSIEVKYGSVYEEEEMERKDNYNNKKIGGEDDFVRVGDNGASVRLQGSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKPLLTKSKSDTSYCSSISQVSYPHAAGSRSMRSQATETELSVALKGVSRVNSLVKLPRFARGLSRRRSGNRFEDIAG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query424 2.2.26 [Sep-21-2011]
Q6NKS1382 Probable protein phosphat yes no 0.792 0.879 0.570 1e-113
Q2RBJ6420 Probable protein phosphat yes no 0.875 0.883 0.501 1e-104
Q9FG61448 Probable protein phosphat no no 0.837 0.792 0.487 1e-102
Q9M8R7492 Probable protein phosphat no no 0.839 0.723 0.455 1e-99
Q8RXZ4504 Probable protein phosphat no no 0.870 0.732 0.437 5e-99
Q9SA22491 Probable protein phosphat no no 0.870 0.751 0.440 1e-97
Q2R637432 Probable protein phosphat no no 0.867 0.851 0.466 3e-96
Q6ZKL8531 Probable protein phosphat no no 0.867 0.693 0.444 7e-95
Q9LR65462 Probable protein phosphat no no 0.834 0.766 0.460 1e-93
Q6K6N7518 Probable protein phosphat no no 0.856 0.700 0.469 3e-93
>sp|Q6NKS1|P2C65_ARATH Probable protein phosphatase 2C 65 OS=Arabidopsis thaliana GN=At5g01700 PE=2 SV=1 Back     alignment and function desciption
 Score =  409 bits (1051), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/354 (57%), Positives = 257/354 (72%), Gaps = 18/354 (5%)

Query: 1   MGGCCS----IEVKYGSVYEEEEMERKDNYNNKKIGGEDDFVRVGDNGASVRLQGSSKNI 56
           MG CCS    I V++G+          D+ N  + G  +  VR  ++GA VR +GSSK++
Sbjct: 1   MGVCCSKGTGIIVEHGA----------DDGN--ECGDGEAEVRDTNDGAVVRTRGSSKHV 48

Query: 57  SMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAI 116
           SM  +QG+KGINQDAMTVWENF G++DT+FCGVFDGHGP GHKI+RHV +NLPS++ + I
Sbjct: 49  SMSIKQGKKGINQDAMTVWENFGGEEDTIFCGVFDGHGPMGHKISRHVCENLPSRVHSKI 108

Query: 117 KLLKR-NHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNII 175
           +  K    E+  N S  SQ   FR  E  LV  ++++D ELGL S  DS+ SG TAV + 
Sbjct: 109 RSSKSAGDENIENNSSQSQEELFREFEDILVTFFKQIDSELGLDSPYDSFCSGTTAVTVF 168

Query: 176 KKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEE 235
           K+ + L+IANLG SRAVL TR  +N    VQLT DLKP +  EAERI +CKGRVFAM+EE
Sbjct: 169 KQADCLVIANLGHSRAVLGTRS-KNSFKAVQLTVDLKPCVQREAERIVSCKGRVFAMEEE 227

Query: 236 PDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDV 295
           PDVYRVWMPD+DCPGLAM+RAFGDFCLKDYGL+ IP++  RK++RED+FVVLATDG+WDV
Sbjct: 228 PDVYRVWMPDDDCPGLAMSRAFGDFCLKDYGLVCIPDVFCRKVSREDEFVVLATDGIWDV 287

Query: 296 LTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKP 349
           L+N EV++ V     + +AA+MLV RA R WRTK+P SK DDCA + L+L H+P
Sbjct: 288 LSNEEVVKVVGSCKDRSVAAEMLVQRAARTWRTKFPASKADDCAVVVLYLNHRP 341

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q2RBJ6|P2C73_ORYSJ Probable protein phosphatase 2C 73 OS=Oryza sativa subsp. japonica GN=Os11g0109000 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q2R637|P2C75_ORYSJ Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q9LR65|P2C01_ARATH Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1 Back     alignment and function description
>sp|Q6K6N7|P2C14_ORYSJ Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query424
255571497463 protein phosphatase-2c, putative [Ricinu 0.945 0.866 0.556 1e-135
356566738424 PREDICTED: probable protein phosphatase 0.964 0.964 0.554 1e-133
356530218434 PREDICTED: probable protein phosphatase 0.964 0.942 0.544 1e-131
359481260441 PREDICTED: probable protein phosphatase 0.948 0.911 0.560 1e-130
147779219441 hypothetical protein VITISV_019794 [Viti 0.948 0.911 0.560 1e-130
357506251447 hypothetical protein MTR_7g070510 [Medic 0.976 0.926 0.516 1e-127
224091062477 predicted protein [Populus trichocarpa] 0.981 0.872 0.514 1e-125
449461743446 PREDICTED: probable protein phosphatase 0.964 0.917 0.496 1e-118
224140529319 predicted protein [Populus trichocarpa] 0.702 0.934 0.611 1e-115
297735601 692 unnamed protein product [Vitis vinifera] 0.778 0.476 0.570 1e-114
>gi|255571497|ref|XP_002526696.1| protein phosphatase-2c, putative [Ricinus communis] gi|223533996|gb|EEF35718.1| protein phosphatase-2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/455 (55%), Positives = 310/455 (68%), Gaps = 54/455 (11%)

Query: 1   MGGCCSIEVKY--GSVYEEEEMERKDNYNNKKIGGEDDFVRVGDNGASVRLQGSSKNISM 58
           MG CCS E  +  G V E+   +R+   N      +DD V +GD GA +RL G+SK ISM
Sbjct: 1   MGACCSKEPSFAEGRVVEDVVEDREYEGNE-----DDDHVAIGDYGARMRLHGASKYISM 55

Query: 59  FTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKL 118
           ++QQG+KG+NQDAMTVWE F G+KD  FCGVFDGHGP GHK+ARHVRD LPS+LS AIKL
Sbjct: 56  YSQQGKKGVNQDAMTVWEEFIGNKDMFFCGVFDGHGPYGHKVARHVRDTLPSRLSAAIKL 115

Query: 119 LKRNHEDY---------------SNGSKSSQNP---------FFRALEASLVKAYEELDD 154
            + N   Y               S GSK  +N             + EAS  K ++++D+
Sbjct: 116 SQANSIKYGDTDTADGEDSDDSKSEGSKDGENSNSTNNKGTLLLSSWEASFFKCFKDMDE 175

Query: 155 ELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPE 214
           EL L +++DS+ SG TAV ++K+G HLIIANLGDSRAVLCTR ++NQLVPVQLT DLKP 
Sbjct: 176 ELSLDASIDSFCSGTTAVTVVKQGNHLIIANLGDSRAVLCTRSNKNQLVPVQLTVDLKPN 235

Query: 215 IASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEIS 274
           IASEAERI+N  GRVFAM EEP+VYR+WMPDEDCPGLAMARAFGDFCLKDYGLIS PE+S
Sbjct: 236 IASEAERIKNRNGRVFAMAEEPEVYRIWMPDEDCPGLAMARAFGDFCLKDYGLISTPEVS 295

Query: 275 YRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSK 334
           YR+LT +D+FVVLATDG+WDVL+N +VIR VA A K+ MAAKML+  AVRAWR KYPG +
Sbjct: 296 YRRLTNKDEFVVLATDGIWDVLSNYDVIRIVASARKRSMAAKMLIKYAVRAWRNKYPGCR 355

Query: 335 IDDCAAICLFLGHKPLLTKSKSDTSYCS--------SISQVSYPH------AAGSRSMRS 380
           +DDCA ICLFL  + +LT+S S+ S  S        + S+VS         AA  +  R 
Sbjct: 356 VDDCAVICLFLKSRTVLTRSFSEVSRVSANHTELAETYSEVSRASMNCSEIAAVPQRARD 415

Query: 381 QATET---------ELSVALKGVSRVNSLVKLPRF 406
              ET         + + A  GV+RVNS+VK PR 
Sbjct: 416 HGYETLHAKPYLGSKENTAPDGVNRVNSVVKFPRL 450

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356566738|ref|XP_003551586.1| PREDICTED: probable protein phosphatase 2C 65-like [Glycine max] Back     alignment and taxonomy information
>gi|356530218|ref|XP_003533680.1| PREDICTED: probable protein phosphatase 2C 65-like [Glycine max] Back     alignment and taxonomy information
>gi|359481260|ref|XP_002264900.2| PREDICTED: probable protein phosphatase 2C 73-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147779219|emb|CAN65584.1| hypothetical protein VITISV_019794 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357506251|ref|XP_003623414.1| hypothetical protein MTR_7g070510 [Medicago truncatula] gi|355498429|gb|AES79632.1| hypothetical protein MTR_7g070510 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224091062|ref|XP_002309165.1| predicted protein [Populus trichocarpa] gi|222855141|gb|EEE92688.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449461743|ref|XP_004148601.1| PREDICTED: probable protein phosphatase 2C 65-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224140529|ref|XP_002323635.1| predicted protein [Populus trichocarpa] gi|222868265|gb|EEF05396.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297735601|emb|CBI18095.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query424
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.801 0.890 0.574 8.6e-104
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.537 0.452 0.538 5.5e-95
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.587 0.507 0.513 8.9e-95
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.681 0.645 0.489 2.6e-94
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.693 0.628 0.533 1.9e-87
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.792 0.727 0.483 1.4e-85
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.705 0.801 0.466 4.5e-75
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.695 0.824 0.463 2e-72
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.785 0.948 0.435 2.9e-71
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.665 0.851 0.481 1.4e-64
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
 Identities = 201/350 (57%), Positives = 254/350 (72%)

Query:     1 MGGCCSIEVKYGSVYEEEEMERKDNYNNKKIGGEDDFVRVGDNGASVRLQGSSKNISMFT 60
             MG CCS     G + E       D+ N  + G  +  VR  ++GA VR +GSSK++SM  
Sbjct:     1 MGVCCSKGT--GIIVEHGA----DDGN--ECGDGEAEVRDTNDGAVVRTRGSSKHVSMSI 52

Query:    61 QQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLK 120
             +QG+KGINQDAMTVWENF G++DT+FCGVFDGHGP GHKI+RHV +NLPS++ + I+  K
Sbjct:    53 KQGKKGINQDAMTVWENFGGEEDTIFCGVFDGHGPMGHKISRHVCENLPSRVHSKIRSSK 112

Query:   121 R-NHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGE 179
                 E+  N S  SQ   FR  E  LV  ++++D ELGL S  DS+ SG TAV + K+ +
Sbjct:   113 SAGDENIENNSSQSQEELFREFEDILVTFFKQIDSELGLDSPYDSFCSGTTAVTVFKQAD 172

Query:   180 HLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVY 239
              L+IANLG SRAVL TR  +N    VQLT DLKP +  EAERI +CKGRVFAM+EEPDVY
Sbjct:   173 CLVIANLGHSRAVLGTRS-KNSFKAVQLTVDLKPCVQREAERIVSCKGRVFAMEEEPDVY 231

Query:   240 RVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNS 299
             RVWMPD+DCPGLAM+RAFGDFCLKDYGL+ IP++  RK++RED+FVVLATDG+WDVL+N 
Sbjct:   232 RVWMPDDDCPGLAMSRAFGDFCLKDYGLVCIPDVFCRKVSREDEFVVLATDGIWDVLSNE 291

Query:   300 EVIRTVACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKP 349
             EV++ V     + +AA+MLV RA R WRTK+P SK DDCA + L+L H+P
Sbjct:   292 EVVKVVGSCKDRSVAAEMLVQRAARTWRTKFPASKADDCAVVVLYLNHRP 341
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6NKS1P2C65_ARATH3, ., 1, ., 3, ., 1, 60.57060.79240.8795yesno
Q2RBJ6P2C73_ORYSJ3, ., 1, ., 3, ., 1, 60.50120.8750.8833yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 2e-64
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-51
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 9e-37
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-23
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 9e-20
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-15
pfam13672211 pfam13672, PP2C_2, Protein phosphatase 2C 0.002
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  206 bits (527), Expect = 2e-64
 Identities = 94/295 (31%), Positives = 133/295 (45%), Gaps = 48/295 (16%)

Query: 56  ISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTA 115
             +  + G +  N+DA+ +  N   ++D    GVFDGHG  GH         L       
Sbjct: 3   AGVSDKGGDRKTNEDAVVIKPNL-NNEDGGLFGVFDGHG--GHAAGEFASKLLV------ 53

Query: 116 IKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELG--LASAVDSYSSGATAVN 173
            + L    E+    S+         +E +L KA+   D+E+        D   SG TAV 
Sbjct: 54  -EELLEELEETLTLSEED-------IEEALRKAFLRADEEILEEAQDEPDDARSGTTAVV 105

Query: 174 IIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMD 233
            + +G  L +AN+GDSRAVLC          VQLT D KP    E ERI    GRV    
Sbjct: 106 ALIRGNKLYVANVGDSRAVLCRNG-----EAVQLTKDHKPVNEEERERIEKAGGRVS--- 157

Query: 234 EEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVW 293
                 RV         LA+ RA GDF LK  G+ + P+++  KLT +D F++LA+DG+W
Sbjct: 158 ----NGRV------PGVLAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLILASDGLW 206

Query: 294 DVLTNSEVIRTV---ACASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFL 345
           DVL+N E +  V         + AA+ LV  A+R           D+   + + L
Sbjct: 207 DVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRGSH-------DNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|222308 pfam13672, PP2C_2, Protein phosphatase 2C Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 424
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.98
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.91
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.86
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.81
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.7
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.5
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.36
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.01
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-49  Score=393.97  Aligned_cols=269  Identities=36%  Similarity=0.535  Sum_probs=230.6

Q ss_pred             eeeCCCCceeEEEecCCCCCCCccceeeecccC-----CCCCeEEEEEEeCCCcChHHHHHHHHHHhHHHHHHHHHHhhc
Q 045692           47 VRLQGSSKNISMFTQQGRKGINQDAMTVWENFT-----GDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKR  121 (424)
Q Consensus        47 ~~~~g~~~~~~~~s~~G~R~~NEDa~~v~~~~~-----~~~~~~l~gV~DGhGg~G~~aa~~a~~~l~~~l~~~~~~~~~  121 (424)
                      ....+.....+.++.+|+|..|||++.....+.     +.....|||||||||  |+.+|+|++++|+..+.+.+.....
T Consensus        33 ~~~~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~~~  110 (330)
T KOG0698|consen   33 LSINESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFPKD  110 (330)
T ss_pred             ccccccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhcccc
Confidence            344566677888899999999999998876543     223689999999999  9999999999999999987654221


Q ss_pred             ccccccCCCCCCCChhHHHHHHHHHHHHH-HHHHHhccccCCccCCCCceEEEEEEeCC-eEEEEEecCceEEEEEeCCC
Q 045692          122 NHEDYSNGSKSSQNPFFRALEASLVKAYE-ELDDELGLASAVDSYSSGATAVNIIKKGE-HLIIANLGDSRAVLCTRDDR  199 (424)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~al~~a~~-~~d~~l~~~~~~~~~~sGtTavv~li~~~-~l~vanvGDSRa~l~r~~~~  199 (424)
                                      ...++.++.++|. .+|.++... ..+...+|||++++++..+ +|||||+|||||||+++++ 
T Consensus       111 ----------------~~~~~~a~~~~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~-  172 (330)
T KOG0698|consen  111 ----------------RQDVKDALRRAFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGG-  172 (330)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCC-
Confidence                            1458899999999 699999865 2223578888888888754 9999999999999998743 


Q ss_pred             CceeEEEcCCCCCCCCHHHHHHHHHcCCeEEeccCCCCceEeecCCCCCCcccccccccCcCCCCCCcccCceeEEEEcC
Q 045692          200 NQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEISYRKLT  279 (424)
Q Consensus       200 ~~~~~~~LT~DH~p~~~~E~~RI~~~gG~v~~~~~~~~~~rv~~~~~~~~~l~vtRalGD~~~k~~gv~~~Pdv~~~~l~  279 (424)
                         .+++||.||+|+.+.|+.||+++||+|.....   ++|+      .|.|+|||+|||+.+|..+++++|||....++
T Consensus       173 ---~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~---~~Rv------~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~  240 (330)
T KOG0698|consen  173 ---VAVQLSVDHKPDREDERERIEAAGGRVSNWGG---VWRV------NGVLAVSRAFGDVELKSQGVIAEPEIQQVKIN  240 (330)
T ss_pred             ---eeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCC---cceE------eceEEEeeecCCHHhcCCcEecCCceEEEEcC
Confidence               79999999999999999999999999997543   6788      57999999999999997779999999999999


Q ss_pred             CCCeEEEEEccccccccCHHHHHHHHHc----cCCHHHHHHHHHHHHHHHHhhcCCCCCCCcEEEEEEEcCCCCCCCCc
Q 045692          280 REDQFVVLATDGVWDVLTNSEVIRTVAC----ASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKPLLTKS  354 (424)
Q Consensus       280 ~~d~~lVLaSDGlwD~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~~~~~~~g~~~DNiTvIvv~l~~~~~~~~~  354 (424)
                      ..|+|||||||||||+|++||++++|+.    ...+..++..|...|..+       +..||||||||.|.+.+....+
T Consensus       241 ~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~-------~s~DnitvvvV~l~~~~~~~~~  312 (330)
T KOG0698|consen  241 SDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSR-------GSKDNITVVVVRLKSSPKSPSS  312 (330)
T ss_pred             CCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhc-------CCCCCeEEEEEEecCccccccC
Confidence            9999999999999999999999999999    568999999999999987       6799999999999987654443

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 9e-23
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-22
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-22
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-22
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-22
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-22
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-19
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-18
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-18
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 7e-18
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 8e-18
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 9e-18
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-17
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-17
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 2e-16
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-15
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 2e-10
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 2e-10
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-10
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 6e-04
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure 
Iteration: 1

 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 28/225 (12%)
Query: 86  FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
           F GV+DGHG  GHK+A + RD L   L+  I+ +K +     N  +  Q  + +   +  
Sbjct: 67  FFGVYDGHG--GHKVADYCRDRLHFALAEEIERIK-DELSKRNTGEGRQVQWDKVFTSCF 123
Query: 146 VKAYEELDDELGLA---------SAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTR 196
           +    E++ ++G A          AV S + G+TAV  +    H++++N GDSRAVL   
Sbjct: 124 LTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRG 183
Query: 197 DDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARA 256
            +      + L+ D KP+   E  RI N  G+V            W        LAM+R+
Sbjct: 184 KE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGVLAMSRS 228
Query: 257 FGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEV 301
            GD  LK Y +I  PE+++   +RED+ ++LA+DG+WDV+ N EV
Sbjct: 229 IGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 272
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 2e-98
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 4e-60
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-59
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 9e-58
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 7e-56
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 6e-53
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 2e-52
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 4e-51
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-49
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 6e-49
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 6e-49
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 7e-39
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-38
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-08
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 1e-06
1txo_A237 Putative bacterial enzyme; serine/threonine protei 2e-05
3rnr_A211 Stage II sporulation E family protein; structural 1e-04
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 8e-04
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  296 bits (760), Expect = 2e-98
 Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 17/301 (5%)

Query: 57  SMFTQQGRKGINQDAMTVWENFT-GDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTA 115
           ++FT  G +   +D  T+      G  D  F GVFDG    G   + +V+D +  +L ++
Sbjct: 25  AIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLISS 82

Query: 116 IKLLKRNHEDYSN-GSKSSQNPFFRALEASLVKAYEELDDE-LGLASAVDSYSSGATAVN 173
               +      S+  +        + L+ ++   Y+  D+E + +   ++   + +T+V 
Sbjct: 83  PAWQEVTEMLRSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVT 142

Query: 174 IIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMD 233
            +     + + +LGDSR  +        L    LT D KP++  E  RI    G V  + 
Sbjct: 143 AVLAKGFVAVGHLGDSRIAMGVETPNG-LNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLH 201

Query: 234 EEPDVYRVWMPD--------EDCPGLAMARAFGDFCLKDYGLISIPEISYRKLTREDQFV 285
              +   +   D        E    L  +RAFG   LK YGL + P++   ++T + + +
Sbjct: 202 NHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVM 261

Query: 286 VLATDGVWDVLTNSEVIRTVA-CASKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLF 344
           +LATDG+WDV++ ++ +        +    A+ LV   +   +++   +  D+  A+ +F
Sbjct: 262 ILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSA--DNITAMTVF 319

Query: 345 L 345
            
Sbjct: 320 F 320
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query424
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.82
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.78
3f79_A255 Probable two-component response regulator; adaptor 99.62
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.61
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.16
3eq2_A394 Probable two-component response regulator; adaptor 97.91
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=1.5e-49  Score=394.54  Aligned_cols=273  Identities=32%  Similarity=0.434  Sum_probs=223.8

Q ss_pred             eeeCCCCceeEEEecCCCCCCCccceeeecccCC------------------CCCeEEEEEEeCCCcChHHHHHHHHHHh
Q 045692           47 VRLQGSSKNISMFTQQGRKGINQDAMTVWENFTG------------------DKDTVFCGVFDGHGPAGHKIARHVRDNL  108 (424)
Q Consensus        47 ~~~~g~~~~~~~~s~~G~R~~NEDa~~v~~~~~~------------------~~~~~l~gV~DGhGg~G~~aa~~a~~~l  108 (424)
                      +.....-..||+++.+|+|..|||++++..++..                  ..+..|||||||||  |+.+++++++.+
T Consensus         7 ~~~~~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~   84 (337)
T 3qn1_B            7 VYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG--GHKVADYCRDRL   84 (337)
T ss_dssp             ----CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEES--SSHHHHHHHHHH
T ss_pred             hhhhcccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCC--ChhHHHHHHHHH
Confidence            3444555668999999999999999999766421                  12578999999999  999999999999


Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHhcccc-------------CCccCCCCceEEEEE
Q 045692          109 PSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLAS-------------AVDSYSSGATAVNII  175 (424)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a~~~~d~~l~~~~-------------~~~~~~sGtTavv~l  175 (424)
                      +..|.+.+..........     .........++++|.++|..+|+++....             ......+|||+++++
T Consensus        85 ~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~  159 (337)
T 3qn1_B           85 HFALAEEIERIKDELCKR-----NTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVAL  159 (337)
T ss_dssp             HHHHHHHHHHTC-----------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEE
T ss_pred             HHHHHHHHHhhhhhhhcc-----ccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEE
Confidence            999988776532111000     00111235688999999999999887543             122357999999999


Q ss_pred             EeCCeEEEEEecCceEEEEEeCCCCceeEEEcCCCCCCCCHHHHHHHHHcCCeEEeccCCCCceEeecCCCCCCcccccc
Q 045692          176 KKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMAR  255 (424)
Q Consensus       176 i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~LT~DH~p~~~~E~~RI~~~gG~v~~~~~~~~~~rv~~~~~~~~~l~vtR  255 (424)
                      +.++++|+|||||||+|+++++     .+++||.||+|..+.|+.||...||.+.....    .|+      .+.+++||
T Consensus       160 i~~~~l~~anvGDSR~~l~r~g-----~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~----~r~------~g~l~~sR  224 (337)
T 3qn1_B          160 VCSSHIVVSNCGDSRAVLFRGK-----EAMPLSVDHKPDREDEYARIENAGGKVIQWQG----ARV------FGVLAMSR  224 (337)
T ss_dssp             ECSSEEEEEEESSCEEEEEETT-----EEEESCCCCCTTSHHHHHHHHHTTCCEEESSS----EEE------TTTBSCSB
T ss_pred             EECCEEEEEeccCcEEEEEeCC-----EeeeecCCCCCCCHHHHHHHHHcCCeEEecCC----cee------cCcccccc
Confidence            9999999999999999999987     89999999999999999999999999976321    455      68899999


Q ss_pred             cccCcCCCCCCcccCceeEEEEcCCCCeEEEEEccccccccCHHHHHHHHHc---------------------cCCHHHH
Q 045692          256 AFGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVAC---------------------ASKKEMA  314 (424)
Q Consensus       256 alGD~~~k~~gv~~~Pdv~~~~l~~~d~~lVLaSDGlwD~ls~~ei~~iv~~---------------------~~~~~~a  314 (424)
                      +|||..+|++ ++++|++..+.+.+.++|||||||||||+|+++||++++..                     ..+++.+
T Consensus       225 alGd~~~~~~-v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (337)
T 3qn1_B          225 SIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAA  303 (337)
T ss_dssp             CEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHH
T ss_pred             ccccccccCC-CCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHH
Confidence            9999999987 99999999999987778999999999999999999999986                     3457899


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcEEEEEEEcCCCC
Q 045692          315 AKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKP  349 (424)
Q Consensus       315 A~~Lv~~A~~~~~~~~~g~~~DNiTvIvv~l~~~~  349 (424)
                      |+.|++.|+.+       ++.||||||||+|....
T Consensus       304 a~~Lv~~A~~~-------g~~DNiTvivv~l~~~~  331 (337)
T 3qn1_B          304 ADYLSMLALQK-------GSKDNISIIVIDLKAQR  331 (337)
T ss_dssp             HHHHHHHHHHT-------TCCSCEEEEEEECCSCC
T ss_pred             HHHHHHHHHHc-------CCCCCEEEEEEEecCCc
Confidence            99999999998       67999999999998754
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 424
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 6e-30
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 4e-12
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 6e-30
 Identities = 71/302 (23%), Positives = 113/302 (37%), Gaps = 50/302 (16%)

Query: 62  QGRKGINQDAMTVWENF-TGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLK 120
           QG +   +DA T      +G +   F  V+DGH   G ++A++  ++L   +        
Sbjct: 29  QGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHI-------T 79

Query: 121 RNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDSYSSGATAVNIIKKGEH 180
            N +   +    S       +    ++  E +          D   SG+TAV ++   +H
Sbjct: 80  NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADR--SGSTAVGVLISPQH 137

Query: 181 LIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYR 240
               N GDSR +LC             T D KP    E ERI+N  G             
Sbjct: 138 TYFINCGDSRGLLCRNRK-----VHFFTQDHKPSNPLEKERIQNAGGS------------ 180

Query: 241 VWMPDEDCPGLAMARAFGDFCLKDYG--------LISIPEISYRKLTRED-QFVVLATDG 291
             M       LA++RA GDF  K           +   PE+   + + ED QF++LA DG
Sbjct: 181 -VMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDG 239

Query: 292 VWDVLTNSEVIRTVACASKK----EMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGH 347
           +WDV+ N E+   V    +     E     +V   +            D+ + I +   +
Sbjct: 240 IWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR-------DNMSVILICFPN 292

Query: 348 KP 349
            P
Sbjct: 293 AP 294
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query424
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-52  Score=407.37  Aligned_cols=258  Identities=27%  Similarity=0.416  Sum_probs=221.2

Q ss_pred             ceeEEEecCCCCCCCccceeeecccCC-CCCeEEEEEEeCCCcChHHHHHHHHHHhHHHHHHHHHHhhcccccccCCCCC
Q 045692           54 KNISMFTQQGRKGINQDAMTVWENFTG-DKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKS  132 (424)
Q Consensus        54 ~~~~~~s~~G~R~~NEDa~~v~~~~~~-~~~~~l~gV~DGhGg~G~~aa~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~  132 (424)
                      ..||+++.+|+|++|||++++..++.. .++..|||||||||  |+.+|++++++|+..|.+.+......          
T Consensus        21 ~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~~----------   88 (295)
T d1a6qa2          21 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSA----------   88 (295)
T ss_dssp             EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSS----------
T ss_pred             eEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhcccc----------
Confidence            357999999999999999988776643 35678999999999  99999999999999998765443221          


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHhccc--cCCccCCCCceEEEEEEeCCeEEEEEecCceEEEEEeCCCCceeEEEcCCC
Q 045692          133 SQNPFFRALEASLVKAYEELDDELGLA--SAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTD  210 (424)
Q Consensus       133 ~~~~~~~~~~~al~~a~~~~d~~l~~~--~~~~~~~sGtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~~LT~D  210 (424)
                       .......++++|.++|.++++.+...  .......+|||++++++.+++||+|||||||+|+++++     .+++||.|
T Consensus        89 -~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~-----~~~~lT~d  162 (295)
T d1a6qa2          89 -GAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR-----KVHFFTQD  162 (295)
T ss_dssp             -SSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT-----EEEEECCC
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc-----cceeeccc
Confidence             22334678889999999998877532  22334578999999999999999999999999999987     89999999


Q ss_pred             CCCCCHHHHHHHHHcCCeEEeccCCCCceEeecCCCCCCcccccccccCcCCCCCC--------cccCceeEEEEcC-CC
Q 045692          211 LKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYG--------LISIPEISYRKLT-RE  281 (424)
Q Consensus       211 H~p~~~~E~~RI~~~gG~v~~~~~~~~~~rv~~~~~~~~~l~vtRalGD~~~k~~g--------v~~~Pdv~~~~l~-~~  281 (424)
                      |+|.++.|++||.++||.+..       .|+      .+.|++||||||+.+|..+        ++++|+|..+++. ++
T Consensus       163 H~~~~~~E~~Ri~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~  229 (295)
T d1a6qa2         163 HKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEED  229 (295)
T ss_dssp             CCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTT
T ss_pred             cCcccHHHHhhHhhcCCcccc-------ccc------CCceeeeeccCcHHhhhccccCcccccccccccceEEEeeccc
Confidence            999999999999999999864       344      6889999999999998654        8999999999986 66


Q ss_pred             CeEEEEEccccccccCHHHHHHHHHcc----CCHHHHHHHHHHHHHHHHhhcCCCCCCCcEEEEEEEcCCCC
Q 045692          282 DQFVVLATDGVWDVLTNSEVIRTVACA----SKKEMAAKMLVSRAVRAWRTKYPGSKIDDCAAICLFLGHKP  349 (424)
Q Consensus       282 d~~lVLaSDGlwD~ls~~ei~~iv~~~----~~~~~aA~~Lv~~A~~~~~~~~~g~~~DNiTvIvv~l~~~~  349 (424)
                      |+|||||||||||+|+++||++++...    .+++.+|+.|++.|+.+       +..||||||||+|+.+|
T Consensus       230 ~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-------gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         230 DQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-------GSRDNMSVILICFPNAP  294 (295)
T ss_dssp             EEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-------TCCSCEEEEEEECTTSC
T ss_pred             ceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc-------CCCCCeEEEEEeccCCC
Confidence            779999999999999999999999764    67999999999999987       56899999999999765
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure