Citrus Sinensis ID: 046101

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
MASSLEDRDSLFKFVVQDGNGVKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAPIDLSKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPFFTMPKPTVKIGPLPQLVEKEGSRFRELLFQDYRNNFFSNAHDGKKSLDFARAI
cccccccHHHHHHHHHHccccHHHHHHccccccccccccccccccccccccccccccEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHccccccccEEEEEcccccccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccEEEEEEcccccccccccccccccccccccEEEEccccccEEEEEEcccccccccccEEEcccccccEEEEEccEEHHHccccccccccEEcccccccEEEEEEEEccccccEEEcccccccccccccccccHHHHHHHHHHccccccccccccccc
ccccccccHHHHHHcccccccHHHHHHccccccccHcEccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEccEcccccccccHHHHEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEcccccccccccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEcccHHHHccccccccccccHHHHHHHHHHcccccccHHHHEccc
MASSLEDRDSLFKFVVQdgngvkgivdlglskvpqpyiqpqeeridkknastcaqapidlskldgpnHEQVAQQIARACETLGffqvvnhgvPVELLESLKDAAhtffcqpsekkavyregvspsplvnyrtsfapekekALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLgvtldeseLDAIIGFKMVnmnfyptcpnpeltvgvgrhsdVGALTILLQDGigglyvrveedipdvgkkgewmeippvpgalvinvgdtlqilsngryksaehrvrttssksrvsipfftmpkptvkigplpqlveKEGSRFRELLFQDYRnnffsnahdgkksLDFARAI
MASSLEDRDSLFKFVVQdgngvkgivdlglskvpQPYIQPqeeridkknaSTCAQAPIDLSKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNgryksaehrvrttssksrvsipfftmpkptvkigplPQLVEKEGSRFRELLFQDYRNnffsnahdgkkSLDFARAI
MASSLEDRDSLFKFVVQDGNGVKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAPIDLSKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHrvrttssksrvsIPFFTMPKPTVKIGPLPQLVEKEGSRFRELLFQDYRNNFFSNAHDGKKSLDFARAI
**********LFKFVVQDGNGVKGIVDLGLSKVP************************************VAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVS*SPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRY*****************IPFFTMPKPTVKIGPLPQLVEKEGSRFRELLFQDYRNNFFS***************
******D*DSLFKFVVQDGNGVKGIVDLGLSKVPQPYIQP**************QAPIDLSKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVY**********NYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPFFTMPKPTVKIGPLPQLVEKEGSRFRELLFQDYRNNFFSNAHDGKKSLDFARAI
********DSLFKFVVQDGNGVKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAPIDLSKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGR**************SRVSIPFFTMPKPTVKIGPLPQLVEKEGSRFRELLFQDYRNNFFSNAHDGKKSLDFARAI
******DRDSLFKFVVQDGNGVKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAPIDLSKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPFFTMPKPTVKIGPLPQLVEKEGSRFRELLFQDYRNNFFSNAHDGKKSLDFARAI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASSLEDRDSLFKFVVQDGNGVKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAPIDLSKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPFFTMPKPTVKIGPLPQLVEKEGSRFRELLFQDYRNNFFSNAHDGKKSLDFARAI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query363 2.2.26 [Sep-21-2011]
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.936 0.941 0.485 5e-93
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.964 0.969 0.471 7e-93
Q9LTH8364 1-aminocyclopropane-1-car no no 0.909 0.906 0.318 3e-49
Q84MB3365 1-aminocyclopropane-1-car no no 0.942 0.936 0.325 9e-49
Q43383398 1-aminocyclopropane-1-car no no 0.922 0.841 0.332 8e-47
Q8H1S4369 1-aminocyclopropane-1-car no no 0.920 0.905 0.336 1e-45
Q9C5K7369 1-aminocyclopropane-1-car no no 0.922 0.907 0.328 4e-45
Q9LTH7366 1-aminocyclopropane-1-car no no 0.909 0.901 0.305 2e-44
Q0WPW4307 1-aminocyclopropane-1-car no no 0.732 0.866 0.364 3e-44
P10967363 1-aminocyclopropane-1-car N/A no 0.895 0.895 0.329 5e-44
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function desciption
 Score =  341 bits (875), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 233/350 (66%), Gaps = 10/350 (2%)

Query: 14  FVVQDGNGVKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAPIDLSKLDGPNHEQVAQ 73
           FVV  GNGVKG+ + G+  +P+ YIQP EER+  K  +   +A I +  +  P+ ++VA+
Sbjct: 19  FVVYKGNGVKGLSETGIKALPEQYIQPLEERLINKFVNETDEA-IPVIDMSNPDEDRVAE 77

Query: 74  QIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTS 133
            +  A E  GFFQV+NHGVP+E+L+ +K A H FF  P E+K  + +  S S  V + TS
Sbjct: 78  AVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFNLPVEEKRKFTKENSLSTTVRFGTS 137

Query: 134 FAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFKNLG 193
           F+P  E+ALEWKDY+++ + ++AEA + WP  C    LEY+  S KMVR+LLE L KNL 
Sbjct: 138 FSPLAEQALEWKDYLSLFFVSEAEAEQFWPDICRNETLEYINKSKKMVRRLLEYLGKNLN 197

Query: 194 VT-LDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIGGLYVRVE 252
           V  LDE++    +G   VN+N+YP CPNP+LTVGVGRHSDV +LTILLQD IGGL+VR  
Sbjct: 198 VKELDETKESLFMGSIRVNLNYYPICPNPDLTVGVGRHSDVSSLTILLQDQIGGLHVRSL 257

Query: 253 EDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPFFT 312
                    G W+ +PPV G+ VIN+GD +QI+SNG YKS EHRV      +R+S+P F 
Sbjct: 258 -------ASGNWVHVPPVAGSFVINIGDAMQIMSNGLYKSVEHRVLANGYNNRISVPIFV 310

Query: 313 MPKPTVKIGPLPQLVEK-EGSRFRELLFQDYRNNFFSNAHDGKKSLDFAR 361
            PKP   IGPLP+++   E   +R++L+ DY   FF  AHDGKK++D+A+
Sbjct: 311 NPKPESVIGPLPEVIANGEEPIYRDVLYSDYVKYFFRKAHDGKKTVDYAK 360
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|Q43383|ACCH5_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 Back     alignment and function description
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|Q0WPW4|ACCO5_ARATH 1-aminocyclopropane-1-carboxylate oxidase 5 OS=Arabidopsis thaliana GN=At1g77330 PE=2 SV=1 Back     alignment and function description
>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
224081447366 predicted protein [Populus trichocarpa] 0.997 0.989 0.741 1e-160
255544670 677 leucoanthocyanidin dioxygenase, putative 0.972 0.521 0.755 1e-158
147861098366 hypothetical protein VITISV_011327 [Viti 0.994 0.986 0.718 1e-155
296083508366 unnamed protein product [Vitis vinifera] 0.994 0.986 0.709 1e-153
359497230 638 PREDICTED: LOW QUALITY PROTEIN: 1-aminoc 0.994 0.565 0.707 1e-153
296083512366 unnamed protein product [Vitis vinifera] 0.994 0.986 0.707 1e-153
296082730 485 unnamed protein product [Vitis vinifera] 1.0 0.748 0.704 1e-152
359494539 479 PREDICTED: 1-aminocyclopropane-1-carboxy 0.977 0.741 0.716 1e-152
363807822362 uncharacterized protein LOC100803722 [Gl 0.988 0.991 0.698 1e-150
388522299367 unknown [Lotus japonicus] 0.988 0.978 0.674 1e-144
>gi|224081447|ref|XP_002306414.1| predicted protein [Populus trichocarpa] gi|222855863|gb|EEE93410.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 270/364 (74%), Positives = 319/364 (87%), Gaps = 2/364 (0%)

Query: 1   MASSLEDRDSLFKFVVQDGNGVKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAPIDL 60
           MA S  D +S+F FVV+DGNGVKG+VD GLS+VP+ Y+QP EERIDK NA+     PIDL
Sbjct: 1   MAPSFLDGNSMFNFVVRDGNGVKGMVDFGLSEVPEQYVQPPEERIDKLNATAHDNPPIDL 60

Query: 61  SKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYRE 120
           SKLDGP+H+Q+ ++IA A ETLGFFQV+NHGVPVELLESLKDAA+ FF QP EKKAVYR+
Sbjct: 61  SKLDGPDHDQIVEEIATAAETLGFFQVMNHGVPVELLESLKDAANNFFGQPPEKKAVYRK 120

Query: 121 GVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMKM 180
           GVSPSP V Y TSF P+KEKALEWKDYI+M YT DAEALE WP+EC +VALEYLRTS+KM
Sbjct: 121 GVSPSPSVRYGTSFVPDKEKALEWKDYISMRYTTDAEALEYWPQECKDVALEYLRTSIKM 180

Query: 181 VRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILL 240
           VRK+LE+L   LGVTLD+S++D +IG K+VNMNFYPTCPNPELTVGVGRHSD+G LT+LL
Sbjct: 181 VRKVLEILIGKLGVTLDDSKIDGLIGLKLVNMNFYPTCPNPELTVGVGRHSDMGILTVLL 240

Query: 241 QDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTT 300
           QD IGGLYV++EE++ D  +KG+W+EIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTT
Sbjct: 241 QDDIGGLYVKMEEEM-DGKRKGDWLEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTT 299

Query: 301 SSKSRVSIPFFTMPKPTVKIGPLPQLVEKEG-SRFRELLFQDYRNNFFSNAHDGKKSLDF 359
            +KSRVSIP FT+PKPT +IGPLPQ+VE++G +R+RE +F++Y NNFFSNAHDGKKSLDF
Sbjct: 300 RTKSRVSIPIFTIPKPTERIGPLPQVVERDGVARYREFIFEEYMNNFFSNAHDGKKSLDF 359

Query: 360 ARAI 363
           A+ I
Sbjct: 360 AKNI 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255544670|ref|XP_002513396.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223547304|gb|EEF48799.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147861098|emb|CAN80862.1| hypothetical protein VITISV_011327 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083508|emb|CBI23485.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497230|ref|XP_002263144.2| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase homolog 12 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083512|emb|CBI23495.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082730|emb|CBI21735.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494539|ref|XP_002263261.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|363807822|ref|NP_001242438.1| uncharacterized protein LOC100803722 [Glycine max] gi|255645215|gb|ACU23105.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388522299|gb|AFK49211.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
TAIR|locus:2090359357 AT3G12900 [Arabidopsis thalian 0.975 0.991 0.615 1e-123
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.936 0.941 0.474 1.5e-83
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.964 0.969 0.457 1e-82
TAIR|locus:505006595360 AT5G12270 [Arabidopsis thalian 0.922 0.930 0.399 8.5e-65
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.898 0.895 0.313 1.1e-46
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.914 0.954 0.328 1.8e-46
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.876 0.911 0.324 3e-46
TAIR|locus:2009130365 AT1G06620 [Arabidopsis thalian 0.931 0.926 0.320 1.3e-45
TAIR|locus:2052796362 AT2G30840 [Arabidopsis thalian 0.939 0.941 0.326 7.1e-45
TAIR|locus:2052781358 AT2G30830 [Arabidopsis thalian 0.931 0.944 0.324 9.1e-45
TAIR|locus:2090359 AT3G12900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
 Identities = 224/364 (61%), Positives = 286/364 (78%)

Query:     1 MASSLEDRDSLFKFVVQDGNGVKGIVDLGLSKVPQPYIQPQEERIDKKNASTC-AQAPID 59
             M  + ED+ +LF FVV++GNGVKG++D GLS VP+P++QP  ERI  + A TC A  PID
Sbjct:     1 MGINFEDQTTLFNFVVREGNGVKGMIDSGLSSVPRPFVQPLSERIPTQKALTCEATQPID 60

Query:    60 LSKLDGPNHEQVAQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYR 119
             LS LDGP H++VA+QI  A ETLGFFQVVNHGV VELLE LK +AH FF Q  E+K++Y 
Sbjct:    61 LSNLDGPQHKEVAKQIVEAAETLGFFQVVNHGVSVELLELLKSSAHEFFAQAPEEKSMYL 120

Query:   120 EGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWPKECNEVALEYLRTSMK 179
             + VSPS LV Y TSF P+KEKA+EWKDY++M+YTND+EAL+ WP+ C EVALE+L +SM+
Sbjct:   121 KEVSPSKLVKYGTSFVPDKEKAIEWKDYVSMLYTNDSEALQHWPQPCREVALEFLNSSME 180

Query:   180 MVRKLLEVLFKNLGVTLDESELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTIL 239
             MV+ ++ +L +N+GVTL+E +++ ++G KMVNMN+YPTCP+PELTVGVGRHSD+G LT+L
Sbjct:   181 MVKNVVNILMENVGVTLEEEKMNGLMGTKMVNMNYYPTCPSPELTVGVGRHSDMGMLTVL 240

Query:   240 LQDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHXXXX 299
             LQDGIGGLYV+++         GEW EIPPV GALVIN+GDTLQILSNG+YKSAEH    
Sbjct:   241 LQDGIGGLYVKLDN--------GEWAEIPPVHGALVINIGDTLQILSNGKYKSAEHRVRT 292

Query:   300 XXXXXXXXIPFFTMPKPTVKIGPLPQLVEKEG-SRFRELLFQDYRNNFFSNAHDGKKSLD 358
                     +P FT P P+ K+GPLP++V+++G +R++E LFQDY NNFF   HDGKKSLD
Sbjct:   293 TNIGSRVSVPIFTAPNPSQKVGPLPEVVKRDGVARYKEFLFQDYMNNFFGQPHDGKKSLD 352

Query:   359 FARA 362
             FARA
Sbjct:   353 FARA 356
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0071281 "cellular response to iron ion" evidence=IEP
GO:0071369 "cellular response to ethylene stimulus" evidence=IEP
GO:0071732 "cellular response to nitric oxide" evidence=IEP
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006595 AT5G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052781 AT2G30830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00050361
hypothetical protein (366 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-78
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 4e-74
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 4e-67
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 6e-67
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-63
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-62
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 7e-58
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 7e-57
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 9e-57
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-55
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 8e-54
PLN02216357 PLN02216, PLN02216, protein SRG1 4e-47
PLN02904357 PLN02904, PLN02904, oxidoreductase 4e-45
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-43
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 7e-41
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 4e-39
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-38
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-38
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-38
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-36
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 4e-34
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 3e-33
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 3e-32
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-28
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 1e-26
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 8e-25
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-21
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 9e-06
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information 
 Score =  245 bits (627), Expect = 1e-78
 Identities = 125/328 (38%), Positives = 182/328 (55%), Gaps = 26/328 (7%)

Query: 20  NGVKGIVDLGLSKVPQPYIQPQEER-----IDKKNASTCAQAP-IDLSKLDGPNHEQVAQ 73
            GVK + D G++KVP  YI P  +R      +   AS   + P IDL++L G N   V  
Sbjct: 26  KGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLA 85

Query: 74  QIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTS 133
            +A AC   GFFQVVNHGVP E++  + D A  FF  P E++A Y      +P V Y TS
Sbjct: 86  TLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAP-VRYGTS 144

Query: 134 FAPEKEKALEWKDYINMVYTNDAEALEQWPK---ECNEVALEYLRTSMKMVRKLLEVLFK 190
           F   K+    W+D++ +V    ++ L  WP    +  +VA  Y + + ++  +L+E + +
Sbjct: 145 FNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVAATYAKATKRLFLELMEAILE 204

Query: 191 NLGVTLDES-----ELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIG 245
           +LG+    S     E +A  G +M+ +N YP CP PELT+G+  HSD G LT+LLQD + 
Sbjct: 205 SLGIVKRGSDELLEEFEA--GSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVE 262

Query: 246 GLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSR 305
           GL +            G W+ + P+PG+ V+NVGD L+I SNGRYKS  HRVR  S+K R
Sbjct: 263 GLQIM---------HAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPR 313

Query: 306 VSIPFFTMPKPTVKIGPLPQLVEKEGSR 333
           +S+           +GP P+LV+++  R
Sbjct: 314 ISVASLHSLPFERVVGPAPELVDEQNPR 341

Length = 374
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 363
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02704335 flavonol synthase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PLN03176120 flavanone-3-hydroxylase; Provisional 99.86
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.15
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 93.51
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 90.94
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 89.4
TIGR02466201 conserved hypothetical protein. This family consis 85.01
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 81.29
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=8.5e-83  Score=616.69  Aligned_cols=334  Identities=36%  Similarity=0.634  Sum_probs=290.0

Q ss_pred             CCchHHHHhcCCCCCCCCCcCCCCcccccccc---CCCCCCCCeeeeCCC---CChHHHHHHHHHHHHHcCeEEEEcCCC
Q 046101           19 GNGVKGIVDLGLSKVPQPYIQPQEERIDKKNA---STCAQAPIDLSKLDG---PNHEQVAQQIARACETLGFFQVVNHGV   92 (363)
Q Consensus        19 ~~~v~~l~~~~~~~~p~~~~~p~~~~~~~~~~---~~~~~~~iPvIDls~---~~~~~~~~~l~~A~~~~GfF~l~nHGi   92 (363)
                      .++||.|+++|+.+||++|++|++++|.....   .+....+||||||+.   ..+..++++|++||++||||||+||||
T Consensus        25 ~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI  104 (374)
T PLN02947         25 QKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGV  104 (374)
T ss_pred             ecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCC
Confidence            34899999999999999999999988753210   001233799999987   346788999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhcCCCHHHHhhhhcCCCCCCccccccCcCcccccccCcccceeeeecCCchhhccCc---hhHHHH
Q 046101           93 PVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDAEALEQWP---KECNEV  169 (363)
Q Consensus        93 ~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~wP---~~fr~~  169 (363)
                      +.++++++++.+++||+||.|+|+++..... ....||+..+....+...+|+|.+.+...|....++.||   +.||+.
T Consensus       105 p~~li~~~~~~~~~FF~LP~eeK~k~~~~~~-~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~~~~~fr~~  183 (374)
T PLN02947        105 PSEVIGGMIDVARRFFELPLEERAKYMSADM-RAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKV  183 (374)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHhhhhcccC-CCCeeeccccccccccccCceeceeeecCCcccccccCccchHHHHHH
Confidence            9999999999999999999999999854432 234577655444445568999998776556433457897   579999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCc---ccc-ccccccceeeEccccCCCCCCCCccCccccccCCCeeEEeeCCcC
Q 046101          170 ALEYLRTSMKMVRKLLEVLFKNLGVTLD---ESE-LDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGIG  245 (363)
Q Consensus       170 ~~~y~~~~~~l~~~ll~~l~~~Lgl~~~---~~~-~~~~~~~~~~~~~~YP~~~~~~~~~g~~~HtD~~~lTlL~qd~~~  245 (363)
                      +++|+++|.+|+.+||++|+++|||+++   +|. ........+| +||||||++++.++|+++|||+|+||||+||+++
T Consensus       184 ~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lr-ln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~  262 (374)
T PLN02947        184 AATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMV-VNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVE  262 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeee-eecCCCCCCcccccCCCCccCCCceEEEEecCCC
Confidence            9999999999999999999999999743   444 2223345677 9999999999999999999999999999999999


Q ss_pred             ceEEEeCCCCCCCCCCCcEEEcCCCCCeEEEEecchhHHhhcCccccccccccCCCCCCeeEEEEeeCCCCCCeEecCCc
Q 046101          246 GLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPFFTMPKPTVKIGPLPQ  325 (363)
Q Consensus       246 GLqV~~~~~~~~~~~~g~W~~V~p~pg~~vVniGD~L~~lSnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~  325 (363)
                      ||||++++         +|++|+|+||++||||||+||+||||+|||++|||++++.++||||+||+.|+.|++|+|+++
T Consensus       263 GLQV~~~g---------~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~  333 (374)
T PLN02947        263 GLQIMHAG---------RWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPE  333 (374)
T ss_pred             CeeEeECC---------EEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChH
Confidence            99999855         999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             ccccCC-CcCCcccHHHHHHHHHhcCCCCCCcccccccC
Q 046101          326 LVEKEG-SRFRELLFQDYRNNFFSNAHDGKKSLDFARAI  363 (363)
Q Consensus       326 ~v~~~~-~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~  363 (363)
                      |+++++ ++|++++|+||++.++++...|++.++.+|||
T Consensus       334 lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~  372 (374)
T PLN02947        334 LVDEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKLI  372 (374)
T ss_pred             hcCCCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhcc
Confidence            999988 99999999999999999999999999999987

>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 9e-36
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 9e-36
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-34
1w9y_A319 The Structure Of Acc Oxidase Length = 319 8e-29
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 5e-12
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 1e-05
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 1e-05
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 1e-05
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  147 bits (371), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 29/329 (8%)
Query: 22  VKGIVDLGLSKVPQPYIQPQEER-------IDKKNASTCAQAPIDLSKLDGPN---HEQV 71
           V+ +   G+  +P+ YI+P+EE        +++K         IDL  ++  +    E  
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66
Query: 72  AQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYR 131
            +++ +A    G   ++NHG+P +L+E +K A   FF    E+K  Y    +   +  Y 
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126
Query: 132 TSFAPEKEKALEWKDY-INMVYTNDAEALEQWPKECNEVALEYLRTSMKMVRKLLEVLFK 190
           +  A      LEW+DY  ++ Y  +   L  WPK  ++  +E      K +R L   +FK
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDY-IEATSEYAKCLRLLATKVFK 185
Query: 191 NL--GVTLDESELDAIIG-----FKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDG 243
            L  G+ L+   L+  +G        + +N+YP CP PEL +GV  H+DV ALT +L + 
Sbjct: 186 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 245
Query: 244 IGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHXXXXXXXX 303
           + GL +  E         G+W+    VP ++V+++GDTL+ILSNG+YKS  H        
Sbjct: 246 VPGLQLFYE---------GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEK 296
Query: 304 XXXXIPFFTM-PKPTVKIGPLPQLVEKEG 331
                  F   PK  + + PLP++V  E 
Sbjct: 297 VRISWAVFCEPPKDKIVLKPLPEMVSVES 325
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-128
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-114
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 7e-80
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-76
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-72
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-71
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  371 bits (955), Expect = e-128
 Identities = 101/361 (27%), Positives = 167/361 (46%), Gaps = 36/361 (9%)

Query: 22  VKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAP-------IDLSKLDGPN---HEQV 71
           V+ +   G+  +P+ YI+P+EE     +     +         IDL  ++  +    E  
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 72  AQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYR 131
            +++ +A    G   ++NHG+P +L+E +K A   FF    E+K  Y    +   +  Y 
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126

Query: 132 TSFAPEKEKALEWKDYINM-VYTNDAEALEQWPK---ECNEVALEYLRTSMKMVRKLLEV 187
           +  A      LEW+DY     Y  +   L  WPK   +  E   EY +    +  K+ + 
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186

Query: 188 LFKNLGVTLDESELDAIIG-----FKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQD 242
           L   LG  L+   L+  +G        + +N+YP CP PEL +GV  H+DV ALT +L +
Sbjct: 187 LSVGLG--LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 244

Query: 243 GIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSS 302
            + GL +           +G+W+    VP ++V+++GDTL+ILSNG+YKS  HR      
Sbjct: 245 MVPGLQLF---------YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKE 295

Query: 303 KSRVSIPFFTMPKP-TVKIGPLPQLVEKEG-SRFRELLFQDYRNNFFSNAHDGKKSLDFA 360
           K R+S   F  P    + + PLP++V  E  ++F    F  +  +       GK+  +  
Sbjct: 296 KVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKL----FGKEQEELV 351

Query: 361 R 361
            
Sbjct: 352 S 352
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.96
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 92.39
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 80.91
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.4e-80  Score=598.33  Aligned_cols=328  Identities=29%  Similarity=0.525  Sum_probs=283.2

Q ss_pred             CCchHHHHhcCCCCCCCCCcCCCCccccccc---cC-CCCCCCCeeeeCCC--C----ChHHHHHHHHHHHHHcCeEEEE
Q 046101           19 GNGVKGIVDLGLSKVPQPYIQPQEERIDKKN---AS-TCAQAPIDLSKLDG--P----NHEQVAQQIARACETLGFFQVV   88 (363)
Q Consensus        19 ~~~v~~l~~~~~~~~p~~~~~p~~~~~~~~~---~~-~~~~~~iPvIDls~--~----~~~~~~~~l~~A~~~~GfF~l~   88 (363)
                      .++||+|+++++.+||++|++|+++++....   .. .....+||||||+.  .    .+.+++++|.+||++||||||+
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            4679999999999999999999888765321   00 00012699999987  1    1456889999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhcCCCHHHHhhhhcCCCCCCccccccCcCcccccccCcccceeeeecCCc-hhhccCc---h
Q 046101           89 NHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDA-EALEQWP---K  164 (363)
Q Consensus        89 nHGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP---~  164 (363)
                      ||||+.++++++++.+++||+||.|+|+++..........||+........+..||+|.|.+...|.. ..++.||   +
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            99999999999999999999999999999965431024578876544444567899999988766643 3467888   4


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccc-ccc---cccceeeEccccCCCCCCCCccCccccccCCCeeEEe
Q 046101          165 ECNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESE-LDA---IIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILL  240 (363)
Q Consensus       165 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~-~~~---~~~~~~~~~~~YP~~~~~~~~~g~~~HtD~~~lTlL~  240 (363)
                      .||+.+++|+++|.+|+..||++|+++|||++++|. ...   .....+| +||||||++++.++|+++|||+|+||||+
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr-l~~YPp~~~~~~~~g~~~HtD~g~lTlL~  242 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMK-INYYPKCPQPELALGVEAHTDVSALTFIL  242 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEE-EEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceee-eeecCCCCCcccccCcCCccCCCeEEEEE
Confidence            799999999999999999999999999999999998 433   2445678 99999999999999999999999999999


Q ss_pred             eCCcCceEEEeCCCCCCCCCCCcEEEcCCCCCeEEEEecchhHHhhcCccccccccccCCCCCCeeEEEEeeCCCCCC-e
Q 046101          241 QDGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPFFTMPKPTV-K  319 (363)
Q Consensus       241 qd~~~GLqV~~~~~~~~~~~~g~W~~V~p~pg~~vVniGD~L~~lSnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~-~  319 (363)
                      ||+++||||++++         +|++|+|+||++||||||+||+||||+|||++|||++++.++|||++||++|+.|+ +
T Consensus       243 qd~v~GLQV~~~g---------~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~  313 (356)
T 1gp6_A          243 HNMVPGLQLFYEG---------KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV  313 (356)
T ss_dssp             ECSCCCEEEEETT---------EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCE
T ss_pred             EcCCCCeEEecCC---------cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcE
Confidence            9999999999755         99999999999999999999999999999999999998889999999999999999 9


Q ss_pred             EecCCcccccCC-CcCCcccHHHHHHHHHhcCCCCCCc
Q 046101          320 IGPLPQLVEKEG-SRFRELLFQDYRNNFFSNAHDGKKS  356 (363)
Q Consensus       320 i~pl~~~v~~~~-~~y~~~~~~ey~~~~~~~~~~~~~~  356 (363)
                      |+|+++|+++++ ++|+++|++||+..++.++++|+..
T Consensus       314 i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          314 LKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             ECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             EeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence            999999999888 9999999999999998887777643
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 363
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 8e-68
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 8e-62
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-51
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 1e-41
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  215 bits (547), Expect = 8e-68
 Identities = 99/351 (28%), Positives = 164/351 (46%), Gaps = 29/351 (8%)

Query: 22  VKGIVDLGLSKVPQPYIQPQEERIDKKNASTCAQAP-------IDLSKLDGPNH---EQV 71
           V+ +   G+  +P+ YI+P+EE     +     +         IDL  ++  +    E  
Sbjct: 6   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 65

Query: 72  AQQIARACETLGFFQVVNHGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYR 131
            +++ +A    G   ++NHG+P +L+E +K A   FF    E+K  Y    +   +  Y 
Sbjct: 66  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 125

Query: 132 TSFAPEKEKALEWKDY-INMVYTNDAEALEQW---PKECNEVALEYLRTSMKMVRKLLEV 187
           +  A      LEW+DY  ++ Y  +   L  W   P +  E   EY +    +  K+ + 
Sbjct: 126 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 185

Query: 188 LFKNLGVTLDESELDAIIG---FKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQDGI 244
           L   LG+  D  E +          + +N+YP CP PEL +GV  H+DV ALT +L + +
Sbjct: 186 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 245

Query: 245 GGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKS 304
            GL +  E         G+W+    VP ++V+++GDTL+ILSNG+YKS  HR      K 
Sbjct: 246 PGLQLFYE---------GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKV 296

Query: 305 RVSIPFFTMPKP-TVKIGPLPQLVEKEG-SRFRELLFQDY-RNNFFSNAHD 352
           R+S   F  P    + + PLP++V  E  ++F    F  +  +  F    +
Sbjct: 297 RISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQE 347
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 88.68
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.3e-76  Score=568.10  Aligned_cols=319  Identities=30%  Similarity=0.545  Sum_probs=271.1

Q ss_pred             CchHHHHhcCCCCCCCCCcCCCCcccccccc----CCCCCCCCeeeeCCC--C----ChHHHHHHHHHHHHHcCeEEEEc
Q 046101           20 NGVKGIVDLGLSKVPQPYIQPQEERIDKKNA----STCAQAPIDLSKLDG--P----NHEQVAQQIARACETLGFFQVVN   89 (363)
Q Consensus        20 ~~v~~l~~~~~~~~p~~~~~p~~~~~~~~~~----~~~~~~~iPvIDls~--~----~~~~~~~~l~~A~~~~GfF~l~n   89 (363)
                      ..||+|+++|+.+||++|++|+.+++.+...    ......+||||||+.  .    .+.+++++|.+||++||||||+|
T Consensus         4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~n   83 (349)
T d1gp6a_           4 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   83 (349)
T ss_dssp             CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             cchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEc
Confidence            3699999999999999999999999876320    022344899999987  1    25678999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhcCCCHHHHhhhhcCCCCCCccccccCcCcccccccCcccceeeeecCCc-hhhccCc---hh
Q 046101           90 HGVPVELLESLKDAAHTFFCQPSEKKAVYREGVSPSPLVNYRTSFAPEKEKALEWKDYINMVYTNDA-EALEQWP---KE  165 (363)
Q Consensus        90 HGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP---~~  165 (363)
                      |||+.++++++++++++||+||.|+|++|......+...+|+...........+|.+.+.....+.. ..++.||   +.
T Consensus        84 HGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~  163 (349)
T d1gp6a_          84 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSD  163 (349)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTT
T ss_pred             cCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccch
Confidence            9999999999999999999999999999965433223344544433334556777776654333433 4567887   56


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccc-cc-c--cccceeeEccccCCCCCCCCccCccccccCCCeeEEee
Q 046101          166 CNEVALEYLRTSMKMVRKLLEVLFKNLGVTLDESE-LD-A--IIGFKMVNMNFYPTCPNPELTVGVGRHSDVGALTILLQ  241 (363)
Q Consensus       166 fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~-~~-~--~~~~~~~~~~~YP~~~~~~~~~g~~~HtD~~~lTlL~q  241 (363)
                      |++.+++|+++|.+|+.+|+++++++||+++++|. .. .  .....+| ++|||+++.++..+|+++|||+|+||||+|
T Consensus       164 f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lr-l~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  242 (349)
T d1gp6a_         164 YIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMK-INYYPKCPQPELALGVEAHTDVSALTFILH  242 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEE-EEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeee-ecccccccchhhccccccCCCCcceEEEec
Confidence            99999999999999999999999999999999987 32 1  2233567 999999999999999999999999999999


Q ss_pred             CCcCceEEEeCCCCCCCCCCCcEEEcCCCCCeEEEEecchhHHhhcCccccccccccCCCCCCeeEEEEeeCCCCCCeE-
Q 046101          242 DGIGGLYVRVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPFFTMPKPTVKI-  320 (363)
Q Consensus       242 d~~~GLqV~~~~~~~~~~~~g~W~~V~p~pg~~vVniGD~L~~lSnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i-  320 (363)
                      +.++||||+.++         +|++|+|.+|++|||+||+||+||||+|||++|||+.++.++||||+||++|+.|++| 
T Consensus       243 ~~~~GLqv~~~g---------~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~  313 (349)
T d1gp6a_         243 NMVPGLQLFYEG---------KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVL  313 (349)
T ss_dssp             CSCCCEEEEETT---------EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEE
T ss_pred             cCCcceeeecCC---------ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceee
Confidence            999999998766         9999999999999999999999999999999999999999999999999999999865 


Q ss_pred             ecCCcccccCC-CcCCcccHHHHHHHHHh
Q 046101          321 GPLPQLVEKEG-SRFRELLFQDYRNNFFS  348 (363)
Q Consensus       321 ~pl~~~v~~~~-~~y~~~~~~ey~~~~~~  348 (363)
                      +|||+||++++ ++|+++|++||++.++.
T Consensus       314 ~pl~~~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         314 KPLPEMVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             CCCGGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             cCCHHHcCCCCCCCCCCccHHHHHHHHHh
Confidence            99999999998 89999999999998774
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure