Citrus Sinensis ID: 046163


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
MNMNMILVFLSVLSFLISLPRAYGNPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLVPKPQDSPNRSFDGGVSNLMNEALSRALRTPKMFGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLIASPTPAPPSPGSERSSKGRGTKAIWIAIGTTIPLFILLVSVEDPADRPNMSSVAVMLASDTVPLPQPSQPAFSAGRSIARSGQSSSSDSKICSVNEVTLSDVSPR
ccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEcccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccEEEEEEccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccEEEEEEccccccccccccccccccccccccccccccEEEEEEEEEcccHHEEEHHHccccccccccccHHcccccccccccccccccccccccccccccccccccccccccEEEEEccccc
ccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccHcccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHcHHHcccccccEEEccccEEEEEEEcccccccccccccccccccccccccccccccHHHEEHEHHHHHHHHHHHHcHHHccccccHEEEEccccccccccccccccccccccHccccccccccEEEEccEEEcccccc
MNMNMILVFLSVLSFLISlpraygnpwrmgyycsdgmnftsnsTYQSNLKLLLSTLRssathgssdkfsdgfynatagqdpdkvYGLFLcrgdvsretcQDCVNFAISelskfcpvqKIAVIWYQECLLhysnysflstvdtsavvlvpkpqdspnrsfdggvSNLMNEALSRALrtpkmfgtakkdysdsptlyglaqctqdlspdqcRSCLGEAISKLAGccsirqggqvlypsciTRYElsqfyndtliasptpappspgsersskgrgtKAIWIAIGTTIPLFILLVsvedpadrpnmSSVAVMLAsdtvplpqpsqpafsagrsiarsgqssssdskicsvnevtlsdvspr
MNMNMILVFLSVLSFLISLPRAYGNPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLVpkpqdspnrsfdggVSNLMNEALSRALRTPKMFGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLIasptpappspgsersskgrGTKAIWIAIGTTIPLFILLVSVEDPADRPNMSSVAVMLASDTVPLPQPSQPAFSAGRSIARsgqssssdskicsvnevtlsdvspr
MNMNMilvflsvlsflislPRAYGNPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLVPKPQDSPNRSFDGGVSNLMNEALSRALRTPKMFGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLIasptpappspGSERSSKGRGTKAIWIAIGTTIPLFILLVSVEDPADRPNMSSVAVMLASDTVPLPQPSQPAFsagrsiarsgqssssdskicsVNEVTLSDVSPR
****MILVFLSVLSFLISLPRAYGNPWRMGYYCSDGMNFTSNSTYQSNLKLLLST***************GFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLV********************************************TLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLI*********************KAIWIAIGTTIPLFILLVSV****************************************************************
***NMILVFLSVLSFLISLPRAYGNPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLVPKPQDSPNRSFDGGVSNLMNEALSRALRTPKMFGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYND********************GRGTKAIWIAIGTTIPLFILLVSVEDPA******************LPQPSQPAFSAGR**************ICSVNEVTLSDVSPR
MNMNMILVFLSVLSFLISLPRAYGNPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLVPKPQDSPNRSFDGGVSNLMNEALSRALRTPKMFGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLIASP*****************TKAIWIAIGTTIPLFILLVSVEDPADRPNMSSVAVMLASDTVPLPQPSQ**********************CSVNEVTLSDVSPR
*NMNMILVFLSVLSFLISLPRAYGNPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLVPKPQDSPNRSFDGGVSNLMNEALSRALRTPKMFGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLIASP******************KAIWIAIGTTIPLFILLVSVEDPADRPNMSSVAVMLASDTVP**************************KICSVNEVTLSD****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNMNMILVFLSVLSFLISLPRAYGNPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLVPKPQDSPNRSFDGGVSNLMNEALSRALRTPKMFGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLIASPTPAPPSPGSERSSKGRGTKAIWIAIGTTIPLFILLVSVEDPADRPNMSSVAVMLASDTVPLPQPSQPAFSAGRSIARSGQSSSSDSKICSVNEVTLSDVSPR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query357 2.2.26 [Sep-21-2011]
O65468 676 Cysteine-rich receptor-li no no 0.649 0.343 0.418 6e-47
Q9M0X5 675 Cysteine-rich receptor-li no no 0.775 0.410 0.358 4e-44
Q8GYA4 669 Cysteine-rich receptor-li no no 0.661 0.352 0.386 1e-42
O65482 830 Putative cysteine-rich re no no 0.630 0.271 0.394 1e-40
O65469265 Putative cysteine-rich re no no 0.621 0.837 0.398 2e-40
O65479 666 Putative cysteine-rich re no no 0.717 0.384 0.361 5e-40
Q8L7G3 659 Cysteine-rich receptor-li no no 0.621 0.336 0.394 4e-39
Q8GWJ7 645 Cysteine-rich receptor-li no no 0.764 0.423 0.365 6e-39
Q8W4G6 627 Cysteine-rich receptor-li no no 0.613 0.349 0.403 1e-38
Q9C5S9 674 Cysteine-rich receptor-li no no 0.621 0.329 0.377 2e-37
>sp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2 Back     alignment and function desciption
 Score =  188 bits (477), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/246 (41%), Positives = 148/246 (60%), Gaps = 14/246 (5%)

Query: 25  NPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKV 84
           NP+ + + C +   ++SNSTY +NLK LLS+  S      +  +S GF N  AGQ PD+V
Sbjct: 36  NPFYLNHDCPNRTTYSSNSTYSTNLKTLLSSFASR-----NASYSTGFQNIRAGQTPDRV 90

Query: 85  YGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSA 144
            GLFLCRGD+S E C +CV F+++E    CP Q+ AV +Y+EC+L YS+ +FLSTV    
Sbjct: 91  TGLFLCRGDLSPEVCSNCVAFSVNESLTRCPNQREAVFYYEECILRYSHKNFLSTVTYEG 150

Query: 145 VVLVPKP------QDSPNRSFDGGVSNLMNEALSRALRTPKMFGTAKKDYSDSPTLYGLA 198
            +++  P      Q+  ++  D   SN MN+A + A  + + F T K + +   TLYGL 
Sbjct: 151 ELIMRNPNNISSIQNQRDQFIDLVQSN-MNQAANEAANSSRKFSTIKTELTSLQTLYGLV 209

Query: 199 QCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLIASPTPA 258
           QCT DL+   C SCL  +I+++      R G +  +PSC +RYEL  FYN+T I +P+P 
Sbjct: 210 QCTPDLARQDCFSCLTSSINRMMPL--FRIGARQFWPSCNSRYELYAFYNETAIGTPSPP 267

Query: 259 PPSPGS 264
           P  PGS
Sbjct: 268 PLFPGS 273





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1 Back     alignment and function description
>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3 Back     alignment and function description
>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1 Back     alignment and function description
>sp|O65469|CRK9_ARATH Putative cysteine-rich receptor-like protein kinase 9 OS=Arabidopsis thaliana GN=CRK9 PE=5 SV=1 Back     alignment and function description
>sp|O65479|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2 Back     alignment and function description
>sp|Q8L7G3|CRK7_ARATH Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1 Back     alignment and function description
>sp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2 Back     alignment and function description
>sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2 Back     alignment and function description
>sp|Q9C5S9|CRK6_ARATH Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query357
224113935 674 predicted protein [Populus trichocarpa] 0.711 0.376 0.434 4e-47
255555035 671 ATP binding protein, putative [Ricinus c 0.775 0.412 0.401 9e-46
42567050 1262 cysteine-rich receptor-like protein kina 0.649 0.183 0.418 4e-45
255555031 674 ATP binding protein, putative [Ricinus c 0.616 0.326 0.435 4e-45
152013452 676 RecName: Full=Cysteine-rich receptor-lik 0.649 0.343 0.418 4e-45
3021268 1240 putative protein [Arabidopsis thaliana] 0.649 0.187 0.418 4e-45
297813907340 hypothetical protein ARALYDRAFT_911789 [ 0.770 0.808 0.373 6e-45
255555033 579 ATP binding protein, putative [Ricinus c 0.605 0.373 0.429 7e-44
224076400 666 predicted protein [Populus trichocarpa] 0.719 0.385 0.388 2e-43
15234659 675 cysteine-rich receptor-like protein kina 0.775 0.410 0.358 3e-42
>gi|224113935|ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/274 (43%), Positives = 161/274 (58%), Gaps = 20/274 (7%)

Query: 32  YCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCR 91
           YC +   FT NSTYQ+NL LLLS+L S+AT  + +    GFYN +AGQDPD VYG+FLCR
Sbjct: 31  YCPNTTTFTRNSTYQANLNLLLSSLSSNATRNNIN----GFYNVSAGQDPDAVYGMFLCR 86

Query: 92  GDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSAVVLVPKP 151
           GDVS   C++CVNFA  ++ + CP++K+A+IW+ EC L YSN +  STVD    + +  P
Sbjct: 87  GDVSNSVCRNCVNFAAKDVLERCPIEKVAMIWFDECELRYSNRNIFSTVDQDFTLFMMSP 146

Query: 152 QD---SPNRSFDGGVSNLMNEALSRALRTP---KMFGTAKKDYSDSPTLYGLAQCTQDLS 205
            +    P+R F+  V   +N+  +RA   P   K F   + +Y+    LY L QCT DLS
Sbjct: 147 NNVTVQPDR-FNQLVETTINDIAARAASAPSGAKKFAVQQVNYTGIQKLYTLVQCTPDLS 205

Query: 206 PDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYN--------DTLIASPTP 257
              C  CL  AISKL  CC+ +QGG+VL+ SC  RYEL +FYN                 
Sbjct: 206 TPDCSRCLQGAISKLGNCCNRKQGGRVLFASCNFRYELYEFYNATAAAEAAPPPPPVALS 265

Query: 258 APPSPGSERSSKGRGTKAIWIAIGTTIPLFILLV 291
            PP+ G E + KG+G  +  + I   IP+ + LV
Sbjct: 266 PPPTSGPE-TRKGKGGVSTVLIIAILIPVTVSLV 298




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555035|ref|XP_002518555.1| ATP binding protein, putative [Ricinus communis] gi|223542400|gb|EEF43942.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|42567050|ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana] gi|332659317|gb|AEE84717.1| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255555031|ref|XP_002518553.1| ATP binding protein, putative [Ricinus communis] gi|223542398|gb|EEF43940.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|152013452|sp|O65468.2|CRK8_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 8; Short=Cysteine-rich RLK8; Flags: Precursor Back     alignment and taxonomy information
>gi|3021268|emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|7269163|emb|CAB79271.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297813907|ref|XP_002874837.1| hypothetical protein ARALYDRAFT_911789 [Arabidopsis lyrata subsp. lyrata] gi|297320674|gb|EFH51096.1| hypothetical protein ARALYDRAFT_911789 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255555033|ref|XP_002518554.1| ATP binding protein, putative [Ricinus communis] gi|223542399|gb|EEF43941.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224076400|ref|XP_002304937.1| predicted protein [Populus trichocarpa] gi|222847901|gb|EEE85448.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15234659|ref|NP_192429.1| cysteine-rich receptor-like protein kinase 25 [Arabidopsis thaliana] gi|75335771|sp|Q9M0X5.1|CRK25_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 25; Short=Cysteine-rich RLK25; Flags: Precursor gi|7267280|emb|CAB81062.1| receptor protein kinase-like protein [Arabidopsis thaliana] gi|332657090|gb|AEE82490.1| cysteine-rich receptor-like protein kinase 25 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query357
TAIR|locus:2121676 669 CRK10 "cysteine-rich RLK (RECE 0.719 0.384 0.378 1.2e-51
TAIR|locus:2121651 676 CRK8 "cysteine-rich RLK (RECEP 0.616 0.325 0.423 4.2e-51
TAIR|locus:2121636 659 CRK7 "cysteine-rich RLK (RECEP 0.722 0.391 0.377 5.1e-51
TAIR|locus:2121686 645 CRK19 "cysteine-rich RLK (RECE 0.719 0.398 0.391 1.2e-47
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.619 0.327 0.394 1e-45
TAIR|locus:2121626 830 CRK23 "cysteine-rich RLK (RECE 0.616 0.265 0.393 8e-45
TAIR|locus:2077147 676 CRK4 "cysteine-rich RLK (RECEP 0.593 0.313 0.436 1.7e-43
TAIR|locus:2121666265 EP1 "AT4G23170" [Arabidopsis t 0.616 0.830 0.410 2e-40
TAIR|locus:2141762 665 CRK26 "cysteine-rich RLK (RECE 0.605 0.324 0.347 2.2e-37
TAIR|locus:2141201 679 CRK29 "cysteine-rich RLK (RECE 0.700 0.368 0.317 7.4e-35
TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 448 (162.8 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
 Identities = 104/275 (37%), Positives = 159/275 (57%)

Query:    25 NPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKV 84
             +P  + + C +  N+TSNSTY +NLK LL++L  S+ + S   +S GF NAT GQ PD+V
Sbjct:    36 DPTYVYHTCQNTANYTSNSTYNNNLKTLLASL--SSRNAS---YSTGFQNATVGQAPDRV 90

Query:    85 YGLFLCRGDVSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSFLSTVDTSA 144
              GLF CRGDVS E C+ CV+FA+++    CP QK A ++Y EC+L YSN + LST+ T+ 
Sbjct:    91 TGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECVLRYSNQNILSTLITTG 150

Query:   145 VVLVPKPQDSPNRSFDGGVSNL----MNEALSRALRTPKMFGTAKKDYSDSPTLYGLAQC 200
              V++   ++  +   D  +S+L    +N+A + AL + K FGT K +++   + YGL QC
Sbjct:   151 GVILVNTRNVTSNQLDL-LSDLVLPTLNQAATVALNSSKKFGTRKNNFTALQSFYGLVQC 209

Query:   201 TQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITRYELSQFYNDTLIXX-----X 255
             T DL+   C  CL   I+++    + R G +++ PSC +RYE+  FY ++ +        
Sbjct:   210 TPDLTRQDCSRCLQLVINQIP---TDRIGARIINPSCTSRYEIYAFYTESAVPPPPPPPS 266

Query:   256 XXXXXXXGSERSSKGRGTKAIWIAIGTTIPLFILL 290
                       RS K   +K + IAI   I + +LL
Sbjct:   267 ISTPPVSAPPRSGKDGNSKVLVIAIVVPIIVAVLL 301


GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0004713 "protein tyrosine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0006995 "cellular response to nitrogen starvation" evidence=RCA
TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121636 CRK7 "cysteine-rich RLK (RECEPTOR-like protein kinase) 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121666 EP1 "AT4G23170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141762 CRK26 "cysteine-rich RLK (RECEPTOR-like protein kinase) 26" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141201 CRK29 "cysteine-rich RLK (RECEPTOR-like protein kinase) 29" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00110243
hypothetical protein (675 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 3e-31
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 6e-19
pfam1188348 pfam11883, DUF3403, Domain of unknown function (DU 1e-06
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score =  113 bits (285), Expect = 3e-31
 Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 34  SDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGD 93
           + G   T+NST++SNL  LLS+L S+A    +     GF   T+G  PD VYGL  CRGD
Sbjct: 8   TSGNYTTANSTFESNLNALLSSLSSNA----ASSSGKGFAAGTSGAAPDTVYGLAQCRGD 63

Query: 94  VSRETCQDCVNFAISELSKFCPVQKIAVIWYQECLLHYSNYSF 136
           +S   C+ C+  A+SEL + CP +K   IWY  C L Y +Y F
Sbjct: 64  LSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
>gnl|CDD|221289 pfam11883, DUF3403, Domain of unknown function (DUF3403) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 357
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.91
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.89
PF1188348 DUF3403: Domain of unknown function (DUF3403); Int 97.45
KOG1187361 consensus Serine/threonine protein kinase [Signal 91.97
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.91  E-value=2e-24  Score=174.37  Aligned_cols=103  Identities=44%  Similarity=0.877  Sum_probs=77.9

Q ss_pred             cccCC-C-Cccc-CCCcHHHHHHHHHHHHHHHhccCCCCCCCCCCeeeeecCCCCCeEEEEEecCCCCChhhHHHHHHHH
Q 046163           30 GYYCS-D-GMNF-TSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFA  106 (357)
Q Consensus        30 ~~~C~-~-~~~~-~~~s~f~~nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~~~~~vYgl~qC~~Dls~~~C~~Cl~~a  106 (357)
                      ++.|+ + .++| +.+++|+++|+.||..|..+++...  +  .+|+++..|.++++||||+||++|+++.+|..||+.+
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~--~--~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a   76 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSS--S--KGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADA   76 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-----TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhcc--c--cCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHH
Confidence            35788 3 4567 5677799999999999999987542  1  5799998887889999999999999999999999999


Q ss_pred             HHHHhhhCCCCcceEEEcceeEEEEecccc
Q 046163          107 ISELSKFCPVQKIAVIWYQECLLHYSNYSF  136 (357)
Q Consensus       107 ~~~~~~~C~~~~~a~i~~~~C~lRYs~~~F  136 (357)
                      +..++.+|+.++||+||+++|+||||+++|
T Consensus        77 ~~~~~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   77 VANISSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HCCHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHHHHHhCCCCceEEEECCCEEEEEECCCC
Confidence            999999999999999999999999999998



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins Back     alignment and domain information
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
3a2e_A108 Crystal Structure Of Ginkbilobin-2, The Novel Antif 6e-04
>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108 Back     alignment and structure

Iteration: 1

Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 32/66 (48%) Query: 181 FGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLYPSCITR 240 + T++ +PT YG A C Q +S C +CL ++++ C+ G +V C + Sbjct: 43 YKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQ 102 Query: 241 YELSQF 246 YE F Sbjct: 103 YEQRSF 108

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 7e-29
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 1e-22

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query357
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.95
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.94
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.92
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.92
4aoj_A329 High affinity nerve growth factor receptor; transf 80.46
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.95  E-value=1.1e-27  Score=192.57  Aligned_cols=107  Identities=21%  Similarity=0.475  Sum_probs=96.6

Q ss_pred             CCCCcccccCCCCcccCCCcHHHHHHHHHHHHHHHhccCCCCCCCCCCeeeeecCC-CCCeEEEEEecCCCCChhhHHHH
Q 046163           24 GNPWRMGYYCSDGMNFTSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQ-DPDKVYGLFLCRGDVSRETCQDC  102 (357)
Q Consensus        24 ~~~~~~~~~C~~~~~~~~~s~f~~nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~-~~~~vYgl~qC~~Dls~~~C~~C  102 (357)
                      +++.++++.|++ ++|+++++|++||+.||..|+++++.++     .+|++...+. ++++||||+||+||+++++|+.|
T Consensus         1 A~t~~v~~~Cn~-~~~t~~s~f~~nl~~ll~~L~~~a~~s~-----~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~C   74 (108)
T 3a2e_A            1 ANTAFVSSACNT-QKIPSGSPFNRNLRAMLADLRQNTAFSG-----YDYKTSRAGSGGAPTAYGRATCKQSISQSDCTAC   74 (108)
T ss_dssp             CCCCEEEEEECS-SBCCTTCTHHHHHHHHHHHHHHHGGGTT-----SEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHH
T ss_pred             CCcceeeeecCC-CccCCCChHHHHHHHHHHHHHhhCcccc-----CCceEeeccCCCCceEEEEEEEcCCCCHHHHHHH
Confidence            467889999975 6899999999999999999999987652     5677776654 45899999999999999999999


Q ss_pred             HHHHHHHHhhhCCCCcceEEEcceeEEEEecccc
Q 046163          103 VNFAISELSKFCPVQKIAVIWYQECLLHYSNYSF  136 (357)
Q Consensus       103 l~~a~~~~~~~C~~~~~a~i~~~~C~lRYs~~~F  136 (357)
                      |+.++.+++++||+++||+||+++|+||||+++|
T Consensus        75 l~~a~~~~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           75 LSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHHHTTHHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHHHHHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999999999999998



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query357
d1mqba_283 epha2 receptor tyrosine kinase {Human (Homo sapien 83.59
d1fmka3285 c-src tyrosine kinase {Human (Homo sapiens) [TaxId 81.44
d1t46a_311 c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] 81.06
d1p4oa_308 Insulin-like growth factor 1 receptor {Human (Homo 80.84
d1sm2a_263 Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie 80.08
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.59  E-value=0.31  Score=42.04  Aligned_cols=29  Identities=17%  Similarity=0.360  Sum_probs=25.3

Q ss_pred             hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163          283 TIPLFILLVSVEDPADRPNMSSVAVMLAS  311 (357)
Q Consensus       283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~  311 (357)
                      .+..++..|++.+|.+||+|.+|+++|+.
T Consensus       241 ~l~~li~~cl~~~p~~RPt~~eil~~L~~  269 (283)
T d1mqba_         241 AIYQLMMQCWQQERARRPKFADIVSILDK  269 (283)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHCcCCHhHCcCHHHHHHHHHH
Confidence            35577889999999999999999999863



>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure