Citrus Sinensis ID: 046402

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
VNFHFVINQGNGAKGLSEMRLKALPKQYIHPLEERIDEAKVLPQASIAVNDMSFGLSAYEKKRYSKEPSPSNNVRFVTSFNTQVEKALEWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKFLTVVANCFD
ccEEEEEcccccHHHHHHcccccccccccccHHHHHHHHccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEccccccEEEEEcccccEEEEccccccEEEEEccEEEEEEccccccEEcEEEEcccccEEEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHHccccccccccccccccHHHHHHcccc
cccEEEEEcccccccccccccEEcccEEEEcccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccEEEEEEcccccccccEEEcccccccccEEEEEEcccccccEEEEccccEEEEccccccEEEEEEccEEEEEccccEEEEEEEEEEcccccEEEEEEEcccccccEEcccHHHcccccccccccccHHHHHHHHHHcccccccHHHEEEccccccccccccc
VNFHFVinqgngakglSEMRLKAlpkqyihpLEERIDeakvlpqasiavndmsfglsayekkryskepspsnnvrfVTSFNTQVEKALEWKDflsqtnlnfcpiclnpeltigvgrhsdvSTLTVLLQDSiggfyvrgndgeswidvhpidgslliNIGDALQIlsngryksVEHCVVAsgsknsisvpifinprpqdticplpevlasgekpiykpvlysDYVKHVFRkahdgkktvgFAKMSKFLTVVANCFD
vnfhfvinqgngakglseMRLKALPKQYIHPLEERIDEAKVLPQASIAVNDMSFGLSAYEKKRyskepspsnnvrFVTSFNTQVEKALEWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKFLTVVANCFD
VNFHFVINQGNGAKGLSEMRLKALPKQYIHPLEERIDEAKVLPQASIAVNDMSFGLSAYEKKRYSKEPSPSNNVRFVTSFNTQVEKALEWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKFLTVVANCFD
***HFVIN************LKALPKQYIHPLEERIDEAKVLPQASIAVNDMSFGL*****************VRFVTSFNTQVEKALEWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKFLTVVANCF*
VNFHFVINQGNGAKGLSEMRLKALPKQYIHPLEERIDEAKVLPQASIAVNDMSFGLSAYEKKRYSKEPSPSNNVRFVTSFNTQ*E*ALEWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKFLT*******
VNFHFVINQGNGAKGLSEMRLKALPKQYIHPLEERIDEAKVLPQASIAVNDMSFGLSAYEKK********SNNVRFVTSFNTQVEKALEWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKFLTVVANCFD
VNFHFVINQGNGAKGLSEMRLKALPKQYIHPLEERIDEAKVLPQASIAVNDMSFGLSAYEKKRYSKEPSPSNNVRFVTSFNTQVEKALEWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKFLTV******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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VNFHFVINQGNGAKGLSEMRLKALPKQYIHPLEERIDEAKVLPQASIAVNDMSFGLSAYEKKRYSKEPSPSNNVRFVTSFNTQVEKALEWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKFLTVVANCFD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query255 2.2.26 [Sep-21-2011]
Q9C899361 Feruloyl CoA ortho-hydrox yes no 0.941 0.664 0.423 6e-65
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.933 0.659 0.421 2e-62
Q06942364 Naringenin,2-oxoglutarate N/A no 0.537 0.376 0.378 2e-25
Q05965357 Naringenin,2-oxoglutarate N/A no 0.521 0.372 0.375 1e-24
Q07353369 Naringenin,2-oxoglutarate N/A no 0.619 0.428 0.335 3e-24
P28038377 Naringenin,2-oxoglutarate N/A no 0.584 0.395 0.355 3e-24
P41090364 Naringenin,2-oxoglutarate no no 0.611 0.428 0.333 3e-24
Q05963356 Naringenin,2-oxoglutarate N/A no 0.635 0.455 0.333 7e-24
Q9S818358 Naringenin,2-oxoglutarate no no 0.521 0.371 0.367 8e-24
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 0.521 0.361 0.360 2e-23
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function desciption
 Score =  247 bits (631), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 146/345 (42%), Positives = 186/345 (53%), Gaps = 105/345 (30%)

Query: 4   HFVINQGNGAKGLSEMRLKALPKQYIHPLEERI-------DEAKVLP----------QAS 46
           +FV+++GNG KGLSE  +K LP QYI P EER+       D  + +P            S
Sbjct: 17  NFVVHEGNGVKGLSETGIKVLPDQYIQPFEERLINFHVKEDSDESIPVIDISNLDEKSVS 76

Query: 47  IAVNDMS----------------------------FGLSAYEKKRYSKEPSPSNNVRFVT 78
            AV D +                            FGL   EK+++S+E S S NVRF T
Sbjct: 77  KAVCDAAEEWGFFQVINHGVSMEVLENMKTATHRFFGLPVEEKRKFSREKSLSTNVRFGT 136

Query: 79  SFN------------------TQVEKALEWKD---------------------------- 92
           SF+                  ++ E +  W D                            
Sbjct: 137 SFSPHAEKALEWKDYLSLFFVSEAEASQLWPDSCRSETLEYMNETKPLVKKLLRFLGENL 196

Query: 93  ------------FLSQT--NLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRG 138
                       F+  T  NLN+ PIC NPELT+GVGRHSDVS+LT+LLQD IGG +VR 
Sbjct: 197 NVKELDKTKESFFMGSTRINLNYYPICPNPELTVGVGRHSDVSSLTILLQDEIGGLHVRS 256

Query: 139 NDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQD 198
                W+ V PI GSL+INIGDA+QI+SNGRYKSVEH V+A+GS N ISVPIF++P+P+ 
Sbjct: 257 LTTGRWVHVPPISGSLVINIGDAMQIMSNGRYKSVEHRVLANGSYNRISVPIFVSPKPES 316

Query: 199 TICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKM 243
            I PL EV+ +GEKP+YK +LY+DYVKH FRKAHDGKKT+ FA +
Sbjct: 317 VIGPLLEVIENGEKPVYKDILYTDYVKHFFRKAHDGKKTIDFANI 361
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q06942|FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q05965|FL3H_MATIN Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q07353|FL3H_PETHY Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1 Back     alignment and function description
>sp|P28038|FL3H_HORVU Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|P41090|FL3H_VITVI Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1 Back     alignment and function description
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q9S818|FL3H_ARATH Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1 Back     alignment and function description
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query255
354696022 363 citrus dioxygenase [Citrus limetta] 0.949 0.666 0.446 8e-74
224057036 358 predicted protein [Populus trichocarpa] 0.933 0.664 0.464 7e-69
388499148 361 unknown [Lotus japonicus] 0.941 0.664 0.422 7e-64
15222690 361 2-oxoglutarate (2OG) and Fe(II)-dependen 0.941 0.664 0.423 3e-63
356522918355 PREDICTED: 1-aminocyclopropane-1-carboxy 0.937 0.673 0.421 4e-62
297834358 361 oxidoreductase [Arabidopsis lyrata subsp 0.937 0.662 0.428 7e-62
297829900 361 oxidoreductase [Arabidopsis lyrata subsp 0.937 0.662 0.425 7e-61
15231296 361 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.933 0.659 0.421 9e-61
255569732 363 leucoanthocyanidin dioxygenase, putative 0.580 0.407 0.717 3e-59
224052970 361 2-oxoglutarate-dependent dioxygenase [Po 0.576 0.407 0.736 3e-59
>gi|354696022|gb|AER36089.1| citrus dioxygenase [Citrus limetta] Back     alignment and taxonomy information
 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 154/345 (44%), Positives = 195/345 (56%), Gaps = 103/345 (29%)

Query: 5   FVINQGNGAKGLSEMRLKALPKQYIHPLEERIDEAKVLPQASIAVNDMS----------- 53
           FV+N+G+G KGLSEM LK+LPKQ+  PLEER  E K+L Q SI + DMS           
Sbjct: 19  FVVNKGHGVKGLSEMGLKSLPKQFHQPLEERFSEKKILDQVSIPLIDMSKWESPEVAKSI 78

Query: 54  --------------------------------FGLSAYEKKRYSKEPSPSNNVRFVTSFN 81
                                           F L A EK++YSKE SP NNVR+ +SF 
Sbjct: 79  CDTAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPINNVRYGSSFV 138

Query: 82  TQVEKALEWKDFLS-------QTNLNFCPICLNPEL------------------------ 110
             VE+ALEWKDFLS       +T+  + P+C +  L                        
Sbjct: 139 PHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVFIKRLMHVLVKVLNVK 198

Query: 111 -----------------------------TIGVGRHSDVSTLTVLLQDSIGGFYVRGNDG 141
                                        T+GVGRHSD+ST T+LLQD IGG +VR ++G
Sbjct: 199 RIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNG 258

Query: 142 ESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTIC 201
             WI   PI GSL+INIGDALQI+SNGR KS+EHCV+A+GS+N ISVP+F+NP+P+  +C
Sbjct: 259 TDWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILC 318

Query: 202 PLPEVLASGEKPIYKPVLYSDYVKHVFRKAHDGKKTVGFAKMSKF 246
           P PEVLA+GEKP+YKPVLY+DY +H + KAHDGKKT+ FAK+  F
Sbjct: 319 PFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKIGDF 363

Source: Citrus limetta

Species: Citrus limetta

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224057036|ref|XP_002299115.1| predicted protein [Populus trichocarpa] gi|222846373|gb|EEE83920.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388499148|gb|AFK37640.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|15222690|ref|NP_175925.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] gi|75308873|sp|Q9C899.1|F6H2_ARATH RecName: Full=Feruloyl CoA ortho-hydroxylase 2 gi|12323164|gb|AAG51560.1|AC027034_6 leucoanthocyanidin dioxygenase 2, putative; 51024-52213 [Arabidopsis thaliana] gi|40823177|gb|AAR92264.1| At1g55290 [Arabidopsis thaliana] gi|45752706|gb|AAS76251.1| At1g55290 [Arabidopsis thaliana] gi|332195098|gb|AEE33219.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356522918|ref|XP_003530089.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Glycine max] Back     alignment and taxonomy information
>gi|297834358|ref|XP_002885061.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297330901|gb|EFH61320.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297829900|ref|XP_002882832.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297328672|gb|EFH59091.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15231296|ref|NP_187970.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|75311178|sp|Q9LHN8.1|F6H1_ARATH RecName: Full=Feruloyl CoA ortho-hydroxylase 1 gi|11994563|dbj|BAB02603.1| leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana] gi|44917567|gb|AAS49108.1| At3g13610 [Arabidopsis thaliana] gi|62320500|dbj|BAD95049.1| hypothetical protein [Arabidopsis thaliana] gi|332641861|gb|AEE75382.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255569732|ref|XP_002525830.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223534835|gb|EEF36524.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224052970|ref|XP_002297642.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222844900|gb|EEE82447.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query255
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.717 0.506 0.578 1.6e-63
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.639 0.451 0.616 6.9e-63
TAIR|locus:505006595360 AT5G12270 [Arabidopsis thalian 0.647 0.458 0.454 7.6e-53
TAIR|locus:2090359357 AT3G12900 [Arabidopsis thalian 0.564 0.403 0.524 3.3e-47
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.537 0.388 0.392 1.1e-31
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.521 0.390 0.388 1.8e-27
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.541 0.371 0.382 5.8e-27
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.564 0.413 0.364 7.4e-27
TAIR|locus:2081008358 F3H "flavanone 3-hydroxylase" 0.490 0.349 0.382 1.2e-26
TAIR|locus:2148303366 AT5G59540 [Arabidopsis thalian 0.572 0.398 0.406 1.2e-26
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 549 (198.3 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
 Identities = 110/190 (57%), Positives = 139/190 (73%)

Query:    60 EKKRYSKEPSP--SNNVRFVTSFNTQVEKALEWKD--FLSQT--NLNFCPICLNPELTIG 113
             E   Y  E  P     +RF+   N  V++  + K+  F+  T  NLN+ PIC NPELT+G
Sbjct:   173 ETLEYMNETKPLVKKLLRFLGE-NLNVKELDKTKESFFMGSTRINLNYYPICPNPELTVG 231

Query:   114 VGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSV 173
             VGRHSDVS+LT+LLQD IGG +VR      W+ V PI GSL+INIGDA+QI+SNGRYKSV
Sbjct:   232 VGRHSDVSSLTILLQDEIGGLHVRSLTTGRWVHVPPISGSLVINIGDAMQIMSNGRYKSV 291

Query:   174 EHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIYKPVLYSDYVKHVFRKAHD 233
             EH V+A+GS N ISVPIF++P+P+  I PL EV+ +GEKP+YK +LY+DYVKH FRKAHD
Sbjct:   292 EHRVLANGSYNRISVPIFVSPKPESVIGPLLEVIENGEKPVYKDILYTDYVKHFFRKAHD 351

Query:   234 GKKTVGFAKM 243
             GKKT+ FA +
Sbjct:   352 GKKTIDFANI 361
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006595 AT5G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090359 AT3G12900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081008 F3H "flavanone 3-hydroxylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0116007201
hypothetical protein (358 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-33
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 2e-33
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 9e-33
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-29
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-29
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-28
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 6e-28
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-27
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-26
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-26
PLN02704335 PLN02704, PLN02704, flavonol synthase 6e-26
PLN02947374 PLN02947, PLN02947, oxidoreductase 9e-26
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-25
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 8e-25
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 6e-23
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-22
PLN02216357 PLN02216, PLN02216, protein SRG1 4e-21
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-20
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 3e-19
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-18
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-17
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-16
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 7e-16
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-15
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 2e-13
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 4e-13
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 0.003
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information 
 Score =  124 bits (313), Expect = 1e-33
 Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 5/153 (3%)

Query: 84  VEKAL-EWKDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGE 142
           +EK +   ++ L Q  +N+ P C  P+L +GV  H+DVS LT +L + + G  V   +G 
Sbjct: 199 LEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFILHNMVPGLQVL-YEG- 256

Query: 143 SWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTIC- 201
            W+    +  S++++IGD L+ILSNGRYKS+ H  + +  K  IS  +F  P  +  I  
Sbjct: 257 KWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILK 316

Query: 202 PLPEVLASGEKPIYKPVLYSDYVKH-VFRKAHD 233
           PLPE+++  E P + P  +  +V H +F+K  D
Sbjct: 317 PLPELVSKEEPPKFPPRTFGQHVSHKLFKKPQD 349

Length = 360
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 255
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.9
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 97.48
PLN03176120 flavanone-3-hydroxylase; Provisional 97.48
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 94.39
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 88.32
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 85.53
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=3.5e-56  Score=416.02  Aligned_cols=230  Identities=25%  Similarity=0.525  Sum_probs=201.7

Q ss_pred             CCchHHHhhc-ccCCCCCccCCCCCCC---------------CC---------hHhHHHHHHHHHH--------------
Q 046402           10 GNGAKGLSEM-RLKALPKQYIHPLEER---------------ID---------EAKVLPQASIAVN--------------   50 (255)
Q Consensus        10 ~~~v~~l~~~-~~~~vP~~yi~~~~~~---------------ID---------r~~~~~~l~~Ac~--------------   50 (255)
                      .+.|+.|+.. ++.+||++||+|++++               ||         +++++++|++||+              
T Consensus        14 ~~~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~   93 (357)
T PLN02216         14 VPSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDS   93 (357)
T ss_pred             chhHHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCH
Confidence            3558999876 7889999999997542               55         3568999999999              


Q ss_pred             ----HHHhcC------CHHHHhhhcCCCCCCCccccccCcccccccccChHHhhcc------------------------
Q 046402           51 ----DMSFGL------SAYEKKRYSKEPSPSNNVRFVTSFNTQVEKALEWKDFLSQ------------------------   96 (255)
Q Consensus        51 ----~~~~~~------P~EeK~~~~~~~~~~~~~GY~~~~~~~~~~~~dw~e~~~~------------------------   96 (255)
                          +|++.+      |.|+|+++...  +...+||+.......+++.||+|.|++                        
T Consensus        94 ~li~~~~~~~~~FF~LP~eeK~k~~~~--~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~~  171 (357)
T PLN02216         94 SFLDKVKSEIQDFFNLPMEEKKKLWQR--PGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTL  171 (357)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHhhhcC--CCCccccCccccccccccCCceeeeeeeccCcccccchhcccchHHHHHHH
Confidence                333333      99999999763  345789977655445567788887742                        


Q ss_pred             ---------------------ccc-------------------ccccCCCCCCcccccccccCCCceeEEee-CCCCCce
Q 046402           97 ---------------------TNL-------------------NFCPICLNPELTIGVGRHSDVSTLTVLLQ-DSIGGFY  135 (255)
Q Consensus        97 ---------------------Lgl-------------------~~Yp~~~~~~~~~g~~~HtD~~~lTlL~q-d~v~GLq  135 (255)
                                           |||                   ||||||+.++.++|+++|||+|+||||+| ++++|||
T Consensus       172 ~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQ  251 (357)
T PLN02216        172 ETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQ  251 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCcee
Confidence                                 343                   99999999999999999999999999999 5799999


Q ss_pred             eecCCCCCeEEeccCCCeEEEEcchHHHhhccCceeeeecccccCCCCCccccccccCCCCCCeEecCccccCCCCCCCC
Q 046402          136 VRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLASGEKPIY  215 (255)
Q Consensus       136 V~~~g~~~Wi~v~p~~g~~vVniGd~le~lSnG~~ks~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~y  215 (255)
                      |+++|  +|++|+|++|++|||+||+||+||||+|||++|||+.++.++|||++||+.|+.|++|+|+++|+++++|++|
T Consensus       252 V~~~g--~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y  329 (357)
T PLN02216        252 IKKDG--KWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALF  329 (357)
T ss_pred             EEECC--EEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCC
Confidence            99999  9999999999999999999999999999999999999988999999999999999999999999999999999


Q ss_pred             CCccHHHHHHHHHHhhcCCCcccccccc
Q 046402          216 KPVLYSDYVKHVFRKAHDGKKTVGFAKM  243 (255)
Q Consensus       216 ~~~~~~ey~~~~~~~~~~~~~~ld~~~~  243 (255)
                      ++++|+||+..++++.+.++..++.+||
T Consensus       330 ~~~t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        330 KSLTTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             CCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence            9999999999999999989999998875

>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-18
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-18
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 5e-18
1w9y_A319 The Structure Of Acc Oxidase Length = 319 5e-16
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 1e-10
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 5e-08
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 7e-05
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 7e-05
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 91  KDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGF--YVRGNDGESWIDVH 148
           ++ L Q  +N+ P C  PEL +GV  H+DVS LT +L + + G   +  G     W+   
Sbjct: 206 EELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGK----WVTAK 261
Query: 149 PIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTIC--PLPEV 206
            +  S++++IGD L+ILSNG+YKS+ H  + +  K  IS  +F  P P+D I   PLPE+
Sbjct: 262 CVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEP-PKDKIVLKPLPEM 320
Query: 207 LASGEKPIYKPVLYSDYVKH 226
           ++      + P  ++ +++H
Sbjct: 321 VSVESPAKFPPRTFAQHIEH 340
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 4e-56
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 2e-55
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 3e-07
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-39
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-36
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-36
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-34
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  181 bits (462), Expect = 4e-56
 Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 6/150 (4%)

Query: 91  KDFLSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQD-SIGGFYVRGNDGESWIDVHP 149
           K     T ++  P C  P+L  G+  H+D   + +L QD  + G  +   DG+ WIDV P
Sbjct: 151 KGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQ-WIDVPP 208

Query: 150 IDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTICPLPEVLAS 209
           +  S+++N+GD L++++NG+YKSV H V+A      +S+  F NP     I P P ++  
Sbjct: 209 MRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEK 268

Query: 210 G---EKPIYKPVLYSDYVKHVFRKAHDGKK 236
                K +Y   ++ DY+K         K+
Sbjct: 269 EAEENKQVYPKFVFDDYMKLYAGLKFQAKE 298
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query255
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 83.49
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.5e-54  Score=403.21  Aligned_cols=226  Identities=27%  Similarity=0.515  Sum_probs=196.1

Q ss_pred             CCCchHHHhhcccCCCCCccCCCCC-----------------CC---CC-----------hHhHHHHHHHHHH-------
Q 046402            9 QGNGAKGLSEMRLKALPKQYIHPLE-----------------ER---ID-----------EAKVLPQASIAVN-------   50 (255)
Q Consensus         9 ~~~~v~~l~~~~~~~vP~~yi~~~~-----------------~~---ID-----------r~~~~~~l~~Ac~-------   50 (255)
                      ++++||+|+++++.+||++||+|++                 ..   ||           |++++++|++||+       
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v   82 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL   82 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence            4678999999999999999999821                 11   55           3458899999999       


Q ss_pred             -----------HHHhcC------CHHHHhhhcCCCCCCCccccccCcccccccccChHHhhcc-----------------
Q 046402           51 -----------DMSFGL------SAYEKKRYSKEPSPSNNVRFVTSFNTQVEKALEWKDFLSQ-----------------   96 (255)
Q Consensus        51 -----------~~~~~~------P~EeK~~~~~~~~~~~~~GY~~~~~~~~~~~~dw~e~~~~-----------------   96 (255)
                                 +|++.+      |.|+|+++.+......++||+........++.||+|.|.+                 
T Consensus        83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~  162 (356)
T 1gp6_A           83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP  162 (356)
T ss_dssp             ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred             eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence                       333333      9999999987432135789987765556677888887653                 


Q ss_pred             ----------------------------ccc---------------------ccccCCCCCCcccccccccCCCceeEEe
Q 046402           97 ----------------------------TNL---------------------NFCPICLNPELTIGVGRHSDVSTLTVLL  127 (255)
Q Consensus        97 ----------------------------Lgl---------------------~~Yp~~~~~~~~~g~~~HtD~~~lTlL~  127 (255)
                                                  |||                     ||||||++++..+|+++|||+|+||||+
T Consensus       163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~  242 (356)
T 1gp6_A          163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL  242 (356)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEE
Confidence                                        333                     9999999999999999999999999999


Q ss_pred             eCCCCCceeecCCCCCeEEeccCCCeEEEEcchHHHhhccCceeeeecccccCCCCCccccccccCCCCCC-eEecCccc
Q 046402          128 QDSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQD-TICPLPEV  206 (255)
Q Consensus       128 qd~v~GLqV~~~g~~~Wi~v~p~~g~~vVniGd~le~lSnG~~ks~~HRVv~~~~~~R~Sia~F~~P~~d~-~i~Pl~~l  206 (255)
                      ||+++||||+++|  +|++|+|++|++|||+||+||+||||+|||++|||++++.++|||++||++|+.|+ +|+|++++
T Consensus       243 qd~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~  320 (356)
T 1gp6_A          243 HNMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM  320 (356)
T ss_dssp             ECSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred             EcCCCCeEEecCC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence            9999999999999  99999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             cCCCCCCCCCCccHHHHHHHHHHhhcCCCc
Q 046402          207 LASGEKPIYKPVLYSDYVKHVFRKAHDGKK  236 (255)
Q Consensus       207 v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~  236 (255)
                      +++++|++|+++|++||+..++.++++++.
T Consensus       321 ~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~  350 (356)
T 1gp6_A          321 VSVESPAKFPPRTFAQHIEHKLFGKEQEEL  350 (356)
T ss_dssp             CCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence            999999999999999999999988775543
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 255
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 4e-30
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-27
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-20
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-16
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  113 bits (282), Expect = 4e-30
 Identities = 46/142 (32%), Positives = 78/142 (54%), Gaps = 4/142 (2%)

Query: 94  LSQTNLNFCPICLNPELTIGVGRHSDVSTLTVLLQDSIGGFYVRGNDGESWIDVHPIDGS 153
           L Q  +N+ P C  PEL +GV  H+DVS LT +L + + G  +       W+    +  S
Sbjct: 208 LLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGK--WVTAKCVPDS 265

Query: 154 LLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTIC-PLPEVLASGEK 212
           ++++IGD L+ILSNG+YKS+ H  + +  K  IS  +F  P     +  PLPE+++    
Sbjct: 266 IVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESP 325

Query: 213 PIYKPVLYSDYVKH-VFRKAHD 233
             + P  ++ +++H +F K  +
Sbjct: 326 AKFPPRTFAQHIEHKLFGKEQE 347
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query255
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 83.39
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4e-54  Score=393.33  Aligned_cols=219  Identities=28%  Similarity=0.533  Sum_probs=184.4

Q ss_pred             CCchHHHhhcccCCCCCccCCCCCCC--------------------CC-----------hHhHHHHHHHHHH--------
Q 046402           10 GNGAKGLSEMRLKALPKQYIHPLEER--------------------ID-----------EAKVLPQASIAVN--------   50 (255)
Q Consensus        10 ~~~v~~l~~~~~~~vP~~yi~~~~~~--------------------ID-----------r~~~~~~l~~Ac~--------   50 (255)
                      +..||+|+++|+.+||++||+|++++                    ||           |++++++|++||+        
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            56799999999999999999998774                    55           5689999999999        


Q ss_pred             ----------HHHhcC------CHHHHhhhcCCCCCCCccccccCcccccccccChHHhhcc------------------
Q 046402           51 ----------DMSFGL------SAYEKKRYSKEPSPSNNVRFVTSFNTQVEKALEWKDFLSQ------------------   96 (255)
Q Consensus        51 ----------~~~~~~------P~EeK~~~~~~~~~~~~~GY~~~~~~~~~~~~dw~e~~~~------------------   96 (255)
                                ++++.+      |.|+|+++......+...||+...........+|.+.+..                  
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence                      333333      9999999987443334455554433223333333222111                  


Q ss_pred             ---------------------------ccc---------------------ccccCCCCCCcccccccccCCCceeEEee
Q 046402           97 ---------------------------TNL---------------------NFCPICLNPELTIGVGRHSDVSTLTVLLQ  128 (255)
Q Consensus        97 ---------------------------Lgl---------------------~~Yp~~~~~~~~~g~~~HtD~~~lTlL~q  128 (255)
                                                 |||                     +||||++.+...+|+++|||+|+||||+|
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  242 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  242 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEec
Confidence                                       333                     89999999999999999999999999999


Q ss_pred             CCCCCceeecCCCCCeEEeccCCCeEEEEcchHHHhhccCceeeeecccccCCCCCccccccccCCCCCCeE-ecCcccc
Q 046402          129 DSIGGFYVRGNDGESWIDVHPIDGSLLINIGDALQILSNGRYKSVEHCVVASGSKNSISVPIFINPRPQDTI-CPLPEVL  207 (255)
Q Consensus       129 d~v~GLqV~~~g~~~Wi~v~p~~g~~vVniGd~le~lSnG~~ks~~HRVv~~~~~~R~Sia~F~~P~~d~~i-~Pl~~lv  207 (255)
                      +.++||||+.+|  +|++|+|.+|++|||+||+||+||||+|+|++|||+.+++++|||++||++|+.|++| +|+++||
T Consensus       243 ~~~~GLqv~~~g--~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v  320 (349)
T d1gp6a_         243 NMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV  320 (349)
T ss_dssp             CSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred             cCCcceeeecCC--ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHc
Confidence            999999999999  9999999999999999999999999999999999999999999999999999999865 8999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHh
Q 046402          208 ASGEKPIYKPVLYSDYVKHVFRK  230 (255)
Q Consensus       208 ~~~~p~~y~~~~~~ey~~~~~~~  230 (255)
                      ++++|++|+|+|++||++.++..
T Consensus       321 ~~~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         321 SVESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             CSSSCCSSCCEEHHHHHHHHHHH
T ss_pred             CCCCCCCCCCccHHHHHHHHHhc
Confidence            99999999999999999998754
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure