Citrus Sinensis ID: 046513

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660

MSISTLESCKKRKRRPKLFGFHTFMESGCPISPTGAFRDNVRQFLSACGELEDYKVEGMSIWCTLLVHESSSIVFPLYTIEEHVKHSPQPYCDQCRCSGWANHYMSKRKYHWIIPIDCDWNKPLEDGVFDLQTHILHGLIHCNGFGHLLSINGIEGGSGYLCGREIMDLWDRICTNLRTCKVTVEDVSKKKSMDLRLLHGVAYGHSWFGRWGYKFFHGSFGVREQNYNRAIEILSSLELDNIIQDFCGTDLCREMKQIFHHYRDMSETLLLTLKDLLRFMLTVKSCASAQKKTIMTTTKPSKRMTLRIKSVVKDKSVNYKRFSAVVAKMDSRWSARRLESAAEVIVNALQEQKAENLGHGGGMSRQKLRDAARMHIGDTGLLDYVLKSMNNVIVGSHIVHRAVNPATRLLEYTIHDLCDGAGISEPGPEISDEPLPPLALETGSDVYSEVVYLYMNVLLNYPESELVALATQAVLDSKHFVKEWPFRDEDDQFLRFKCQVMPSFVDSETDLTGKLPPGELVMIPLHSTVLELKEAAESALRDTYCIMENLGVTDVVNMQKLDDGELLFGAVESGSQVWIQGYGIDSDSKLRYEGGNDKWIVKCECGAQDDDGERMVACDICEVWQHTRCHGIEDSGTVPPLFVCPRCCSSFAPSRTESSF

ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccEEEEEEECccccEEEEEEEEEccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHcccCEEEEEEEcccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHcHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccHHHHHHHHHcccEEEccEEEEEEEccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHccccccccccEEEEEEEEcccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEcccccccccccccccccccEEEEEccccccccccEEEccccccEEccccccccccccccccccccccccccccccccccc

**************RPKLFGFHTFMESGCPISPTGAFRDNVRQFLSACGELEDYKVEGMSIWCTLLVHESSSIVFPLYTIEEHVKHSPQPYCDQCRCSGWANHYMSKRKYHWIIPIDCDWNKPLEDGVFDLQTHILHGLIHCNGFGHLLSINGIEGGSGYLCGREIMDLWDRICTNLRTCKVTVEDVSKKKSMDLRLLHGVAYGHSWFGRWGYKFFHGSFGVREQNYNRAIEILSSLELDNIIQDFCGTDLCREMKQIFHHYRDMSETLLLTLKDLLRFMLTVKSCA**********************************FSAVVAKMDSRWSARRLESAAEVIVNALQEQKAENLGHGGGMSRQKLRDAARMHIGDTGLLDYVLKSMNNVIVGSHIVHRAVNPATRLLEYTIHDLCD*******************ALETGSDVYSEVVYLYMNVLLNYPESELVALATQAVLDSKHFVKEWPFRDEDDQFLRFKCQVMPSFVDSETDLTGKLPPGELVMIPLHSTVLELKEAAESALRDTYCIMENLGVTDVVNMQKLDDGELLFGAVESGSQVWIQGYGIDSDSKLRYEGGNDKWIVKCECGAQDDDGERMVACDICEVWQHTRCHGIEDSGTVPPLFVCPRCCSS**********

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MSISTLESCKKRKRRPKLFGFHTFMESGCPISPTGAFRDNVRQFLSACGELEDYKVEGMSIWCTLLVHESSSIVFPLYTIEEHVKHSPQPYCDQCRCSGWANHYMSKRKYHWIIPIDCDWNKPLEDGVFDLQTHILHGLIHCNGFGHLLSINGIEGGSGYLCGREIMDLWDRICTNLRTCKVTVEDVSKKKSMDLRLLHGVAYGHSWFGRWGYKFFHGSFGVREQNYNRAIEILSSLELDNIIQDFCGTDLCREMKQIFHHYRDMSETLLLTLKDLLRFMLTVKSCASAQKKTIMTTTKPSKRMTLRIKSVVKDKSVNYKRFSAVVAKMDSRWSxxxxxxxxxxxxxxxxxxxxxNLGHGGGMSRQKLRDAARMHIGDTGLLDYVLKSMNNVIVGSHIVHRAVNPATRLLEYTIHDLCDGAGISEPGPEISDEPLPPLALETGSDVYSEVVYLYMNVLLNYPESELVALATQAVLDSKHFVKEWPFRDEDDQFLRFKCQVMPSFVDSETDLTGKLPPGELVMIPLHSTVLELKEAAESALRDTYCIMENLGVTDVVNMQKLDDGELLFGAVESGSQVWIQGYGIDSDSKLRYEGGNDKWIVKCECGAQDDDGERMVACDICEVWQHTRCHGIEDSGTVPPLFVCPRCCSSFAPSRTESSF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
PHD finger protein MALE MEIOCYTE DEATH 1	Probable transcription factor required for chromosome organization and progression during male meiosis (e.g. microsporogenesis).	probable	Q7X6Y7

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WEE, chain A
Confidence level:very confident
Coverage over the Query: 589-654
View the alignment between query and template
View the model in PyMOL

Template: 2RNO, chain A
Confidence level:probable
Coverage over the Query: 527-582
View the alignment between query and template
View the model in PyMOL

Template: 3IVP, chain A
Confidence level:probable
Coverage over the Query: 164-205,220-285
View the alignment between query and template
View the model in PyMOL