Citrus Sinensis ID: 046556

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630---
MWRCVSRGLGLSSYRSKRSVSNDSLRSHFSRLFSTNSTGGYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY
ccccccccccccccccccCEEcccccccccccccccccccCEEEEEEEcEEEEcccHHHHHHHHHHHcccccEEEECccccccccHHHHHcccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHHcccEEEEEHHHHHHHHcccccEEEEEEEEcccccEEEEEcccEEECcccccEEccccccccccccHHHHHHHHcccccccccccccccccccccccEEECcCECccccEEEccccccccccccccccccccHHHHHHHHHHHHHccccccccccEEEEEcccccHHHHHHHccccHHHHHHHccccccccccccccccccccccccccccccEEECcccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHccccCECcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEECccCEEEEEcccccccccccccccccccccc
*************************************TGGYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI*****************TVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY
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MWRCVSRGLGLSSYRSKRSVSNDSLRSHFSRLFSTNSTGGYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVSRAGLPLEDLEFVQFHPTGIYGAGCLLLKVGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDEVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).confidentO82663
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).confidentQ6ZDY8
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).confidentQ9U3X4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.3.-.-Acting on the CH-CH group of donors.probable
1.3.5.-With a quinone or related compound as acceptor.probable
1.3.5.111-cis-retinol dehydrogenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2H88, chain A
Confidence level:very confident
Coverage over the Query: 40-633
View the alignment between query and template
View the model in PyMOL
Template: 3VR8, chain A
Confidence level:very confident
Coverage over the Query: 39-633
View the alignment between query and template
View the model in PyMOL