Citrus Sinensis ID: 046594

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
Protein Sequence
MIALATPTDKEEGWSASFYIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSVLSMK
Secondary Structure (PSIPRED)
cccccccccccccccccEEEcccccccccccccccEEEEEccccccccccccEEEEEHHHHHHHHcccccccccccccEEEEEEEccccEEEEEEccccccHHHHHHHHHHHccccccccccccccccccccEEEEEEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEHHHHHHHHHHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHcccHHHcccccccEEEEEEcccccEEEEEEEccccccccHHHHHHHHHHHcccHEEEEEEEEcccccEEEEEEEcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHEEcccccccHHcHccHcccccccccccEEEEEccccEEEEccccccccccHHHHHcccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccHHcccc
Coil and Loop (DISEMBL)
mialatptdkeegwsasfyiaspvnrgeqnygcQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSfgdsvegltlikgdravsrNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVtllgypqdglQRRCLVFEFMQRgslrwnlrekggpldWEKRLAIALQIDSANQMvcmyskppiyhgnitsdnILLDELCNAKLagfgaanycsggsnrrncektSEMAEDINdfvggqecldqrlyipnekfkITSLAKLGDIEKWCISCCsniegnenhpKIVDVLSGLKQVKQLFSSVLSMK
Flexible Loop (DISEMBL)
mialatptdkeegwsASFYIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLksfgdsvegltlikgdravsrnLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFgaanycsggsnrrNCEKTSEMAEDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSVLSMK
Low Complexity Region (SEG)
MIALATPTDKEEGWSASFYIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSVLSMK
Disordered region (IsUnstruct)
*************WSASFYIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG*************EDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF*******
Disordered Region (DISOPRED)
**************************************************IALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAV**************EILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENH**********KQVKQLFSSVLSMK
Disordered Region (DISEMBL)
**********EEGWSASFYIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSVLSMK
Disordered Region (DISPRO)
*************************************************SIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIALATPTDKEEGWSASFYIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSVLSMK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	304	2.2.26 [Sep-21-2011]
Q9LX29	895	Serine/threonine-protein	no	no	0.411	0.139	0.377	1e-13
Q8GYF5	622	Wall-associated receptor	no	no	0.384	0.188	0.434	2e-13
C0LGQ7	898	Probable LRR receptor-lik	no	no	0.371	0.125	0.393	7e-13
C0LGG4	890	Probable LRR receptor-lik	no	no	0.378	0.129	0.382	1e-12
B3LFC0	349	Probable receptor-like pr	no	no	0.467	0.406	0.358	1e-12
Q9S7D9	775	Serine/threonine-protein	no	no	0.430	0.169	0.335	1e-12
Q9LT96	946	Probable leucine-rich rep	no	no	0.394	0.126	0.4	2e-12
Q9FIJ6	751	Serine/threonine-protein	no	no	0.513	0.207	0.321	4e-12
Q9SV83	342	Probable receptor-like pr	no	no	0.345	0.307	0.401	4e-12
Q9LIG2	899	Receptor-like protein kin	no	no	0.384	0.130	0.387	5e-12

>sp|Q9LX29|ACR4_ARATH Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%)

Query: 82  RAVSRNLTVVAVKARRYMASQTKLEEEI-----LLKSSSHLNIVTLLGYPQDGLQRRCLV 136
           + V R+ T VAVK     + + K   E      LL   +H ++++LLGY ++    R LV
Sbjct: 528 KGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEE-CGERLLV 586

Query: 137 FEFMQRGSLRWNLREKGGPL----DWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
           +EFM  GSL  +L  K   L    DW KR+ IA+Q     + +  Y+ PP+ H +I S N
Sbjct: 587 YEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSN 646

Query: 193 ILLDELCNAKLAGFG 207
           IL+DE  NA++A FG
Sbjct: 647 ILIDEEHNARVADFG 661

Controls formative cell division in meristems, including root tips and lateral root initiation zones of the pericycle, in response to CLE40 signal. Acts with CLE40p peptide as a ligand-receptor pair in a signal transduction pathway, coordinating movement of the root tip and organization of cell divisions in the root meristem. Required during embryogenesis and development, probably for the differentiation of protoderm and epidermal cells. Involved in the regulation of cellular organization during the development of sepal margins and ovule integument outgrowth. Can phosphorylate ALE2.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8GYF5|WAKLR_ARATH Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=2 SV=2

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 12/129 (9%)

Query: 87  NLTVVAVKARRY--MASQTKLEEEI-LLKSSSHLNIVTLLGYP-QDGLQRRCLVFEFMQR 142
           N + VA+K  ++    S  ++  EI LL S SH N+V LLG    DG     LV+EFM  
Sbjct: 335 NSSCVAIKRLKHKDTTSIDQVVNEIKLLSSVSHPNLVRLLGCCFADG--EPFLVYEFMPN 392

Query: 143 GSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYS--KPPIYHGNITSDNILLDEL 198
           G+L  +L+ + G  PL W+ RLAIA Q  +AN +  ++S   PPIYH +I S NILLD  
Sbjct: 393 GTLYQHLQHERGQPPLSWQLRLAIACQ--TANAIAHLHSSVNPPIYHRDIKSSNILLDHE 450

Query: 199 CNAKLAGFG 207
            N+K++ FG
Sbjct: 451 FNSKISDFG 459

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|C0LGQ7|Y4245_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 4/117 (3%)

Query: 102 QTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGG--PLDWE 159
           Q K E ++LL+   H+N+VTL+GY  +G Q   L++E+M  G+L+ +L  +    PL WE
Sbjct: 631 QFKAEVDLLLRVH-HINLVTLVGYCDEG-QHLVLIYEYMSNGNLKQHLSGENSRSPLSWE 688

Query: 160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
            RL IA +     + + +  KPP+ H +I S NILLD    AKL  FG +     GS
Sbjct: 689 NRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGS 745

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG4|Y1518_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2

 Score = 74.3 bits (181), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 91  VAVKARRYMASQT----KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
           VAVK   + ++Q     K E E+LL+   H ++V L+GY  DG     L++E+M  G LR
Sbjct: 608 VAVKMLSHSSAQGYKEFKAEVELLLRVH-HRHLVGLVGYCDDG-DNLALIYEYMANGDLR 665

Query: 147 WNLREK--GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
            N+  K  G  L WE R+ IA++     + +    +PP+ H ++ + NILL+E C AKLA
Sbjct: 666 ENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLA 725

Query: 205 GFG 207
            FG
Sbjct: 726 DFG 728

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|B3LFC0|Y1332_ARATH Probable receptor-like protein kinase At1g33260 OS=Arabidopsis thaliana GN=At1g33260 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 6/148 (4%)

Query: 63  RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTL 122
           R++ + G S   L  + G  +++  L V     R Y   +++LE  ILL+   H +IV L
Sbjct: 47  RLIGTGGYSSIYLARVSG--SINAALKVHVSSHRLYQVFRSELE--ILLRLQ-HPHIVKL 101

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNL-REKGGPLDWEKRLAIALQIDSANQMVCMYSKP 181
           LGY  D  +   L+ E++ +G+L+  L R     L W  R AIA Q+  A + +     P
Sbjct: 102 LGYFDDSEESGALLLEYLPQGNLQEKLNRNSKQVLPWRNRTAIAFQVAQAIEHIHEKCSP 161

Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
            I HG+I S NILLD+  N+KL  FG+A
Sbjct: 162 QIVHGDIKSSNILLDKHFNSKLCDFGSA 189

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S7D9|ACCR1_ARATH Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score = 73.9 bits (180), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 15/146 (10%)

Query: 89  TVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
           T++    R +   +T+LE   +L +  H NIV LLGY  + +  R LV+E+M  G+L  +
Sbjct: 554 TIIHTNTREF---ETELE---ILCNIRHCNIVNLLGYSTE-MGERLLVYEYMPHGTLHDH 606

Query: 149 LREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
           L     PL W  R+ IA+Q     + +   ++P I HG++ S N+LLD    A++A FG 
Sbjct: 607 LHSGFSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGL 666

Query: 209 ANYCSGGSNRRNCEKTSEMAEDINDF 234
                  SN    EK  ++  D+ DF
Sbjct: 667 VT----SSN----EKNLDIKRDVYDF 684

Serine/threonine-protein kinase with low activity.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 5/125 (4%)

Query: 87  NLTVVAVKARRYMASQTKLE---EEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
           N  V+A+K  +  + Q   E   E  LL    H N+V LLG+  D  + + LV+E++  G
Sbjct: 655 NGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQ-KEQMLVYEYIPNG 713

Query: 144 SLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           SLR  L  K G  LDW +RL IAL        +   + PPI H ++ S+NILLDE   AK
Sbjct: 714 SLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAK 773

Query: 203 LAGFG 207
           +A FG
Sbjct: 774 VADFG 778

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FIJ6|ACCR4_ARATH Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 9/165 (5%)

Query: 51  IALVTLAILKRRRM-LKSFGDSVEGL------TLIKGDRAVSRNLTVVAVKARRYMASQT 103
           +AL T     R  + + SFG   +G+        IK     +  L+   ++ RR      
Sbjct: 436 LALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSA 495

Query: 104 KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLRE-KGGPLDWEKRL 162
            + E   +   +H N+V LLG+ +D  + R LV+E+M+ GSL  +L   +  PL W+ RL
Sbjct: 496 FVNELESMSRLNHKNLVRLLGFYED-TEERILVYEYMKNGSLADHLHNPQFDPLSWQTRL 554

Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
            IAL      Q +  +  PP+ H +I S NILLD    AK++ FG
Sbjct: 555 MIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFG 599

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SV83|Y4103_ARATH Probable receptor-like protein kinase At4g10390 OS=Arabidopsis thaliana GN=At4g10390 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 2/107 (1%)

Query: 104 KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGP-LDWEKRL 162
           +LE +ILL+   H NIV LLGY  D  +   L+ E++ +G+L+  L+      L W  R+
Sbjct: 82  RLELDILLRLQ-HPNIVKLLGYFDDSEENGALLLEYLPQGNLQEKLQSNSKQVLQWRNRV 140

Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           AIALQ+  A + +     P I HG+I S N+LLD+  + KL  FG+A
Sbjct: 141 AIALQLVQAIEHIHEKCSPQIVHGDIKSSNVLLDKNFDCKLCDFGSA 187

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LIG2|RLK6_ARATH Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 12/129 (9%)

Query: 87  NLTVVAVKARRYMASQT----KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
           N   VAVK   + +SQ     K E E+LL+   H N+V L+GY  +G +   L++E+M  
Sbjct: 613 NTEQVAVKMLSHSSSQGYKEFKAEVELLLRVH-HKNLVGLVGYCDEG-ENLALIYEYMAN 670

Query: 143 GSLRWNLREK--GGPLDWEKRLAIALQIDSANQMVCMYS--KPPIYHGNITSDNILLDEL 198
           G LR ++  K  G  L+WE RL I   ++SA  +  +++  KPP+ H ++ + NILL+E 
Sbjct: 671 GDLREHMSGKRGGSILNWETRLKIV--VESAQGLEYLHNGCKPPMVHRDVKTTNILLNEH 728

Query: 199 CNAKLAGFG 207
            +AKLA FG
Sbjct: 729 LHAKLADFG 737

Probable receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	304
302758336	277	hypothetical protein SELMODRAFT_79297 [S	0.592	0.649	0.309	1e-16
302797470	257	hypothetical protein SELMODRAFT_55289 [S	0.391	0.463	0.407	2e-15
302758334	127	hypothetical protein SELMODRAFT_27523 [S	0.345	0.826	0.444	7e-14
326491023	897	predicted protein [Hordeum vulgare subsp	0.411	0.139	0.385	2e-13
167997097	287	predicted protein [Physcomitrella patens	0.375	0.397	0.396	2e-13
158829429	897	receptor-like kinase CR4 [Hordeum vulgar	0.411	0.139	0.385	2e-13
226507536	735	WAK53a - OsWAK receptor-like protein kin	0.417	0.172	0.381	3e-13
414585636	733	TPA: putative WAK family receptor-like p	0.417	0.173	0.381	3e-13
302797472	127	hypothetical protein SELMODRAFT_17440 [S	0.345	0.826	0.425	6e-13
297820776	894	hypothetical protein ARALYDRAFT_486409 [	0.411	0.139	0.385	8e-13

>gi|302758336|ref|XP_002962591.1| hypothetical protein SELMODRAFT_79297 [Selaginella moellendorffii] gi|300169452|gb|EFJ36054.1| hypothetical protein SELMODRAFT_79297 [Selaginella moellendorffii]

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 46/226 (20%)

Query: 102 QTKL--EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWE 159
           +TKL  +E +++ S+SH NIV + GY  +  +   LV E++  GSL  +L      L W 
Sbjct: 55  KTKLARDELLVISSASHFNIVGVTGYCFNR-KENFLVLEYVPNGSLADHLFSNASTLAWS 113

Query: 160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN--------- 210
            RL IA+Q+ SA + +  Y +P I HG+++SDNILLD+  NAKLAGFG++          
Sbjct: 114 SRLRIAVQVSSALEFLHSYVEPSITHGHVSSDNILLDKSWNAKLAGFGSSRRSCVKRVGS 173

Query: 211 ----------YCSGG-------------SNRRNCEKTSEMAEDINDFVGGQECLDQRLYI 247
                     Y  GG               RR CE      E++   V  + C       
Sbjct: 174 HNFGLKAEEVYRFGGLVMELVTGDRSSSKARRACEVIESGKEEMLGLVLDRRCGS----- 228

Query: 248 PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV 293
            N+     ++ KL ++  WC++     +  +  P +V+V S L+QV
Sbjct: 229 -NDVTDKRAVLKLAEVGAWCMT-----KEAKERPTMVEVASALRQV 268

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302797470|ref|XP_002980496.1| hypothetical protein SELMODRAFT_55289 [Selaginella moellendorffii] gi|300152112|gb|EFJ18756.1| hypothetical protein SELMODRAFT_55289 [Selaginella moellendorffii]

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 11/130 (8%)

Query: 96  RRYMASQTKL--EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKG 153
           ++ +  +TKL  +E +++ S+SH NIV + GY  +  +   LV E++  GSL  +L    
Sbjct: 38  QQVVVKKTKLARDELLVISSASHFNIVGVTGYCFN-RKENFLVLEYVPNGSLADHLFSNA 96

Query: 154 GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS 213
             L W  RL IA+Q+ SA + +  Y +P I HGN++S+NILLD+  NAKLAGF       
Sbjct: 97  STLAWSSRLRIAVQVSSALEFLHSYVEPSIIHGNVSSENILLDKSWNAKLAGF------- 149

Query: 214 GGSNRRNCEK 223
            GS+RR+C K
Sbjct: 150 -GSSRRSCVK 158

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302758334|ref|XP_002962590.1| hypothetical protein SELMODRAFT_27523 [Selaginella moellendorffii] gi|300169451|gb|EFJ36053.1| hypothetical protein SELMODRAFT_27523 [Selaginella moellendorffii]

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 3/108 (2%)

Query: 103 TKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKG-GPLDWEKR 161
           ++LE +ILL+  S  +IV L+G+  D  Q++CLVF++M  G L   L +    P+ W  R
Sbjct: 21  SELELDILLRIRS-ASIVNLVGFSSDA-QQKCLVFDYMHLGRLSRRLFDDTLPPISWGNR 78

Query: 162 LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           L IALQI  A + +  Y++P I H NI+++N+LLD   NAKL+GFG A
Sbjct: 79  LRIALQISRAVEYLHTYAEPHIVHLNISAENVLLDGSWNAKLSGFGRA 126

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326491023|dbj|BAK05611.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 82  RAVSRNLTVVAVKARRYMASQTKLEEEI-----LLKSSSHLNIVTLLGYPQDGLQRRCLV 136
           R + R+ TVVAVK    ++   K  +E      LL   +H +++ LLGY +DG   R LV
Sbjct: 516 RGILRDGTVVAVKRAIKVSDAKKSSKEFHTELDLLSRLNHAHLLDLLGYCEDG-SERLLV 574

Query: 137 FEFMQRGSLRWNLREKGG----PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
           +EFM  GSL  +L  K       L+W +R+ IA+Q     + +  Y+ PP+ H +I S N
Sbjct: 575 YEFMAHGSLYQHLHGKDSNLKKQLNWTRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSN 634

Query: 193 ILLDELCNAKLAGFG 207
           IL+DE  NA++A FG
Sbjct: 635 ILIDEDHNARVADFG 649

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|167997097|ref|XP_001751255.1| predicted protein [Physcomitrella patens subsp. patens] gi|162697236|gb|EDQ83572.1| predicted protein [Physcomitrella patens subsp. patens]

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 110 LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQID 169
           LL+S++H N+V LLGY QD   ++ L++EF + G+L  +L  K   LDW++RL+IALQ  
Sbjct: 51  LLRSANHGNLVRLLGYCQD--VKKVLIYEFAEEGTLWDHLHGKRSRLDWKQRLSIALQTA 108

Query: 170 SANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
              + +     P I+H +I S+NIL+    NAK+A FG +   S   N R    T+
Sbjct: 109 CGLEYLHTGCNPTIFHRDIKSENILITRRMNAKVADFGISKVGSDQDNIRRTHVTT 164

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158829429|gb|ABW81401.1| receptor-like kinase CR4 [Hordeum vulgare subsp. vulgare]

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 82  RAVSRNLTVVAVKARRYMASQTKLEEEI-----LLKSSSHLNIVTLLGYPQDGLQRRCLV 136
           R + R+ TVVAVK    ++   K  +E      LL   +H +++ LLGY +DG   R LV
Sbjct: 516 RGILRDGTVVAVKRAIKVSDAKKSSKEFHTELDLLSRLNHAHLLDLLGYCEDG-SERLLV 574

Query: 137 FEFMQRGSLRWNLREKGG----PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
           +EFM  GSL  +L  K       L+W +R+ IA+Q     + +  Y+ PP+ H +I S N
Sbjct: 575 YEFMAHGSLYQHLHGKDSNLKKQLNWTRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSN 634

Query: 193 ILLDELCNAKLAGFG 207
           IL+DE  NA++A FG
Sbjct: 635 ILIDEDHNARVADFG 649

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226507536|ref|NP_001148133.1| WAK53a - OsWAK receptor-like protein kinase precursor [Zea mays] gi|195616018|gb|ACG29839.1| WAK53a - OsWAK receptor-like protein kinase [Zea mays]

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 79/131 (60%), Gaps = 4/131 (3%)

Query: 82  RAVSRNLTVVAVK-ARRYMASQTK--LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
           R +  N  VVA+K A+R   +QT+  + E I+L  ++H N+V LLG   +  +   LV+E
Sbjct: 418 RGILSNQVVVAIKKAQRVDQTQTEQFINEMIILSQANHKNVVQLLGCCLE-TEVPLLVYE 476

Query: 139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
           F+  G+L  +L     P+ WE RL+IA++  SA   + + +K PI H ++ S NILLD+ 
Sbjct: 477 FITNGALFHHLHNTSVPMSWESRLSIAVETASALAYLHLAAKMPIIHRDVKSSNILLDDN 536

Query: 199 CNAKLAGFGAA 209
             AK++ FGA+
Sbjct: 537 FTAKVSDFGAS 547

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414585636|tpg|DAA36207.1| TPA: putative WAK family receptor-like protein kinase [Zea mays]

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 79/131 (60%), Gaps = 4/131 (3%)

Query: 82  RAVSRNLTVVAVK-ARRYMASQTK--LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
           R +  N  VVA+K A+R   +QT+  + E I+L  ++H N+V LLG   +  +   LV+E
Sbjct: 416 RGILSNQVVVAIKKAQRVDQTQTEQFINEMIILSQANHKNVVQLLGCCLE-TEVPLLVYE 474

Query: 139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
           F+  G+L  +L     P+ WE RL+IA++  SA   + + +K PI H ++ S NILLD+ 
Sbjct: 475 FITNGALFHHLHNTSVPMSWESRLSIAVETASALAYLHLAAKMPIIHRDVKSSNILLDDN 534

Query: 199 CNAKLAGFGAA 209
             AK++ FGA+
Sbjct: 535 FTAKVSDFGAS 545

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302797472|ref|XP_002980497.1| hypothetical protein SELMODRAFT_17440 [Selaginella moellendorffii] gi|300152113|gb|EFJ18757.1| hypothetical protein SELMODRAFT_17440 [Selaginella moellendorffii]

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 3/108 (2%)

Query: 103 TKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKG-GPLDWEKR 161
           ++LE +ILL+  S  NIV L+G+  D  +++CLVF++M  G L   L +    P+ W  R
Sbjct: 21  SELELDILLRIRS-ANIVDLVGFSSDA-EQKCLVFDYMHLGRLSRRLFDDTLPPISWGNR 78

Query: 162 LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           L IA QI  A + +  Y++P + H NI+++N+LLD   NAKL+GFG A
Sbjct: 79  LRIACQISRAVEYLHTYAEPHVVHLNISAENVLLDGSWNAKLSGFGRA 126

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820776|ref|XP_002878271.1| hypothetical protein ARALYDRAFT_486409 [Arabidopsis lyrata subsp. lyrata] gi|297324109|gb|EFH54530.1| hypothetical protein ARALYDRAFT_486409 [Arabidopsis lyrata subsp. lyrata]

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 82  RAVSRNLTVVAVKARRYMASQTKLEEEI-----LLKSSSHLNIVTLLGYPQDGLQRRCLV 136
           + V R+ T VAVK     + + K   E      LL   +H ++++LLGY ++G +R  LV
Sbjct: 528 KGVLRDGTTVAVKKAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEEGGER-LLV 586

Query: 137 FEFMQRGSLRWNLREKGGPL----DWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
           +EFM  GSL  +L  K   L    DW KR+ IA+Q     + +  Y+ PP+ H +I S N
Sbjct: 587 YEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSN 646

Query: 193 ILLDELCNAKLAGFG 207
           IL+DE  NA++A FG
Sbjct: 647 ILIDEEHNARVADFG 661

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	304
TAIR|locus:2090634	663	AT3G19300 [Arabidopsis thalian	0.440	0.202	0.388	7.4e-13
TAIR|locus:2174994	622	AT5G66790 [Arabidopsis thalian	0.384	0.188	0.434	1.2e-12
UNIPROTKB|O24585	901	CR4 "Putative receptor protein	0.407	0.137	0.397	1.2e-12
TAIR|locus:2085720	386	AT3G20530 [Arabidopsis thalian	0.391	0.308	0.401	1.3e-12
TAIR|locus:2160952	751	CCR4 "CRINKLY4 related 4" [Ara	0.513	0.207	0.321	3e-12
TAIR|locus:2128625	898	AT4G20450 [Arabidopsis thalian	0.371	0.125	0.393	4.8e-12
TAIR|locus:2196680	349	AT1G33260 [Arabidopsis thalian	0.467	0.406	0.358	4.9e-12
TAIR|locus:2122834	342	AT4G10390 [Arabidopsis thalian	0.345	0.307	0.401	8.1e-12
TAIR|locus:2081227	895	CR4 "crinkly4" [Arabidopsis th	0.407	0.138	0.389	8.3e-12
TAIR|locus:2195850	890	AT1G51860 [Arabidopsis thalian	0.378	0.129	0.382	1.1e-11

TAIR|locus:2090634 AT3G19300 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 54/139 (38%), Positives = 75/139 (53%)

Query:    82 RAVSRNLTVVAVKARRYMASQTKLE--EEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
             +A   N  V AVK     + Q + E   EI LL    H ++V L G+       R LV+E
Sbjct:   342 KAEFSNGLVAAVKKMNKSSEQAEDEFCREIELLARLHHRHLVALKGFCNKK-NERFLVYE 400

Query:   139 FMQRGSLRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
             +M+ GSL+ +L   +  PL WE R+ IA+ + +A + +  Y  PP+ H +I S NILLDE
Sbjct:   401 YMENGSLKDHLHSTEKSPLSWESRMKIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDE 460

Query:   198 LCNAKLAGFGAANYCSGGS 216
                AKLA FG A+    GS
Sbjct:   461 HFVAKLADFGLAHASRDGS 479

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2174994 AT5G66790 [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 56/129 (43%), Positives = 77/129 (59%)

Query:    87 NLTVVAVKARRYM--ASQTKLEEEI-LLKSSSHLNIVTLLGYP-QDGLQRRCLVFEFMQR 142
             N + VA+K  ++    S  ++  EI LL S SH N+V LLG    DG     LV+EFM  
Sbjct:   335 NSSCVAIKRLKHKDTTSIDQVVNEIKLLSSVSHPNLVRLLGCCFADG--EPFLVYEFMPN 392

Query:   143 GSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSK--PPIYHGNITSDNILLDEL 198
             G+L  +L+ + G  PL W+ RLAIA Q  +AN +  ++S   PPIYH +I S NILLD  
Sbjct:   393 GTLYQHLQHERGQPPLSWQLRLAIACQ--TANAIAHLHSSVNPPIYHRDIKSSNILLDHE 450

Query:   199 CNAKLAGFG 207
              N+K++ FG
Sbjct:   451 FNSKISDFG 459

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|O24585 CR4 "Putative receptor protein kinase CRINKLY4" [Zea mays (taxid:4577)]

 Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 54/136 (39%), Positives = 78/136 (57%)

Query:    82 RAVSRNLTVVAVKARRYMASQTK-----LEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCL 135
             + + R+ TVVAVK R   AS  K        E+ LL   +H +++ LLGY +DG +R  L
Sbjct:   521 KGILRDGTVVAVK-RAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSER-LL 578

Query:   136 VFEFMQRGSLRWNLREKGGPL----DWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD 191
             V+EFM  GSL  +L  K   L    +W +R+ IA+Q     + +  Y+ PP+ H +I S 
Sbjct:   579 VYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSS 638

Query:   192 NILLDELCNAKLAGFG 207
             NIL+DE  NA++A FG
Sbjct:   639 NILIDEDHNARVADFG 654

GO:0042803 "protein homodimerization activity" evidence=IDA

TAIR|locus:2085720 AT3G20530 [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 51/127 (40%), Positives = 71/127 (55%)

Query:    90 VVAVKA--RR-YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
             VVAVK   R  Y  ++  L E ++L    H N+V L+GY  DG QR  LV+E+MQ GSL 
Sbjct:   107 VVAVKQLDRNGYQGNREFLVEVMMLSLLHHQNLVNLVGYCADGDQR-ILVYEYMQNGSLE 165

Query:   147 WNL----REKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
              +L    R K  PLDW+ R+ +A       + +   + PP+ + +  + NILLDE  N K
Sbjct:   166 DHLLELARNKKKPLDWDTRMKVAAGAARGLEYLHETADPPVIYRDFKASNILLDEEFNPK 225

Query:   203 LAGFGAA 209
             L+ FG A
Sbjct:   226 LSDFGLA 232

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2160952 CCR4 "CRINKLY4 related 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
 Identities = 53/165 (32%), Positives = 81/165 (49%)

Query:    51 IALVTLAILKRRRM-LKSFGDSVEGL------TLIKGDRAVSRNLTVVAVKARRYMASQT 103
             +AL T     R  + + SFG   +G+        IK     +  L+   ++ RR      
Sbjct:   436 LALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSA 495

Query:   104 KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLRE-KGGPLDWEKRL 162
              + E   +   +H N+V LLG+ +D  + R LV+E+M+ GSL  +L   +  PL W+ RL
Sbjct:   496 FVNELESMSRLNHKNLVRLLGFYED-TEERILVYEYMKNGSLADHLHNPQFDPLSWQTRL 554

Query:   163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
              IAL      Q +  +  PP+ H +I S NILLD    AK++ FG
Sbjct:   555 MIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFG 599

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2128625 AT4G20450 [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 46/117 (39%), Positives = 67/117 (57%)

Query:   102 QTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGG--PLDWE 159
             Q K E ++LL+   H+N+VTL+GY  +G Q   L++E+M  G+L+ +L  +    PL WE
Sbjct:   631 QFKAEVDLLLRVH-HINLVTLVGYCDEG-QHLVLIYEYMSNGNLKQHLSGENSRSPLSWE 688

Query:   160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS 216
              RL IA +     + + +  KPP+ H +I S NILLD    AKL  FG +     GS
Sbjct:   689 NRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGS 745

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2196680 AT1G33260 [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 53/148 (35%), Positives = 79/148 (53%)

Query:    63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTL 122
             R++ + G S   L  + G  +++  L V     R Y   +++LE  ILL+   H +IV L
Sbjct:    47 RLIGTGGYSSIYLARVSG--SINAALKVHVSSHRLYQVFRSELE--ILLRLQ-HPHIVKL 101

Query:   123 LGYPQDGLQRRCLVFEFMQRGSLRWNL-REKGGPLDWEKRLAIALQIDSANQMVCMYSKP 181
             LGY  D  +   L+ E++ +G+L+  L R     L W  R AIA Q+  A + +     P
Sbjct:   102 LGYFDDSEESGALLLEYLPQGNLQEKLNRNSKQVLPWRNRTAIAFQVAQAIEHIHEKCSP 161

Query:   182 PIYHGNITSDNILLDELCNAKLAGFGAA 209
              I HG+I S NILLD+  N+KL  FG+A
Sbjct:   162 QIVHGDIKSSNILLDKHFNSKLCDFGSA 189

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2122834 AT4G10390 [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 8.1e-12, P = 8.1e-12
 Identities = 43/107 (40%), Positives = 63/107 (58%)

Query:   104 KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGP-LDWEKRL 162
             +LE +ILL+   H NIV LLGY  D  +   L+ E++ +G+L+  L+      L W  R+
Sbjct:    82 RLELDILLRLQ-HPNIVKLLGYFDDSEENGALLLEYLPQGNLQEKLQSNSKQVLQWRNRV 140

Query:   163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
             AIALQ+  A + +     P I HG+I S N+LLD+  + KL  FG+A
Sbjct:   141 AIALQLVQAIEHIHEKCSPQIVHGDIKSSNVLLDKNFDCKLCDFGSA 187

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

TAIR|locus:2081227 CR4 "crinkly4" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.3e-12, P = 8.3e-12
 Identities = 53/136 (38%), Positives = 77/136 (56%)

Query:    82 RAVSRNLTVVAVKARRYMASQ-----TKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCL 135
             + V R+ T VAVK R  M+S       +   E+ LL   +H ++++LLGY ++    R L
Sbjct:   528 KGVLRDGTTVAVK-RAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEE-CGERLL 585

Query:   136 VFEFMQRGSLRWNLREKGGPL----DWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD 191
             V+EFM  GSL  +L  K   L    DW KR+ IA+Q     + +  Y+ PP+ H +I S 
Sbjct:   586 VYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSS 645

Query:   192 NILLDELCNAKLAGFG 207
             NIL+DE  NA++A FG
Sbjct:   646 NILIDEEHNARVADFG 661

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;IMP

GO:0009986 "cell surface" evidence=IDA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030139 "endocytic vesicle" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0009786 "regulation of asymmetric cell division" evidence=IMP

GO:0010311 "lateral root formation" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

GO:0000280 "nuclear division" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0007000 "nucleolus organization" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0048825 "cotyledon development" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

GO:0051301 "cell division" evidence=RCA

TAIR|locus:2195850 AT1G51860 [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 47/123 (38%), Positives = 70/123 (56%)

Query:    91 VAVKARRYMASQT----KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
             VAVK   + ++Q     K E E+LL+   H ++V L+GY  DG     L++E+M  G LR
Sbjct:   608 VAVKMLSHSSAQGYKEFKAEVELLLRVH-HRHLVGLVGYCDDG-DNLALIYEYMANGDLR 665

Query:   147 WNLREK--GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
              N+  K  G  L WE R+ IA++     + +    +PP+ H ++ + NILL+E C AKLA
Sbjct:   666 ENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLA 725

Query:   205 GFG 207
              FG
Sbjct:   726 DFG 728

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	304
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-18
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-14
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-13
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-12
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-11
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-10
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-09
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	8e-07
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	1e-06
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-06
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	6e-06
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	8e-06
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	5e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	9e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-04
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-04
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	3e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	7e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	8e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	8e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.001
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.001
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.001
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.002
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.002
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.002
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	0.002
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.003
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	0.003
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 80.7 bits (200), Expect = 5e-18
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 89  TVVAVK----ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
             VA+K           +  L E  +LK  +H NIV L G  +D      LV E+ + GS
Sbjct: 19  KKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-NHLYLVMEYCEGGS 77

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKL 203
           L+  L+E  G L  ++ L I LQI     +  ++S   I H ++  +NILLD      KL
Sbjct: 78  LKDLLKENEGKLSEDEILRILLQI--LEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKL 134

Query: 204 AGFGAANYCSGGSNRRN 220
           A FG +   +   +   
Sbjct: 135 ADFGLSKLLTSDKSLLK 151

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 72.2 bits (178), Expect = 1e-14
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)

Query: 89  TVVAVKA--RRYMASQTK--LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           T VAVK         + +  LEE  ++K  SH NIV LLG    G +   +V E+M  G 
Sbjct: 29  TKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG-EPLYIVTEYMPGGD 87

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
           L   LR+ G  L  +  L +ALQI  A  M  + SK  + H ++ + N L+ E    K++
Sbjct: 88  LLDFLRKHGEKLTLKDLLQMALQI--AKGMEYLESKNFV-HRDLAARNCLVTENLVVKIS 144

Query: 205 GFG 207
            FG
Sbjct: 145 DFG 147

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 10/132 (7%)

Query: 90  VVAVKA-----RRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           +VAVK       +    QT   E  +L+  SH NIV L+   +D      LV E+ + G 
Sbjct: 26  IVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDK-DHLYLVMEYCEGGD 84

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
           L ++   +GGPL  ++   IALQI     +  ++S   I H ++  +NILLDE    K+A
Sbjct: 85  L-FDYLSRGGPLSEDEAKKIALQILRG--LEYLHSNG-IIHRDLKPENILLDENGVVKIA 140

Query: 205 GFGAANYCSGGS 216
            FG A      S
Sbjct: 141 DFGLAKKLLKSS 152

Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 66.8 bits (164), Expect = 8e-13
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTLL 123
           FG+  +G  L             VAVK  +      Q +  L E  +++   H N+V LL
Sbjct: 12  FGEVYKG-KLKGKGGKKKVE---VAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLL 67

Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
           G   +  +   +V E+M+ G L   LR+    L     L+ ALQI  A  M  + SK  I
Sbjct: 68  GVCTEE-EPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQI--ARGMEYLESKNFI 124

Query: 184 YHGNITSDNILLDELCNAKLAGFG 207
            H ++ + N L+ E    K++ FG
Sbjct: 125 -HRDLAARNCLVGENLVVKISDFG 147

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 64.1 bits (157), Expect = 7e-12
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 16/131 (12%)

Query: 89  TVVAVKARRYMAS---QTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           T VAVK  +  AS   +    +E  ++K   H N+V LLG   +  +   LV E+M+ G 
Sbjct: 24  TEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE-EPLYLVLEYMEGGD 82

Query: 145 LRWNLREK--------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD 196
           L   LR+            L  +  L+ A+QI  A  M  + SK    H ++ + N L+ 
Sbjct: 83  LLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI--AKGMEYLASK-KFVHRDLAARNCLVG 139

Query: 197 ELCNAKLAGFG 207
           E    K++ FG
Sbjct: 140 EDLVVKISDFG 150

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 63.3 bits (155), Expect = 1e-11
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 90  VVAVKA---RRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
           +VA+K    ++    + ++  EI +LK   H NIV L    +D   +  LV E+ + G L
Sbjct: 26  LVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDE-DKLYLVMEYCEGGDL 84

Query: 146 RWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
              L+++G    D  +      QI SA  +  ++SK  I H ++  +NILLDE  + KLA
Sbjct: 85  FDLLKKRGRLSEDEARF--YLRQILSA--LEYLHSKG-IVHRDLKPENILLDEDGHVKLA 139

Query: 205 GFGAANYCSGGSNRRNC 221
            FG A     G      
Sbjct: 140 DFGLARQLDPGEKLTTF 156

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 26/153 (16%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVK-------ARRYMASQTKLEEEI-LLKSSSHLN 118
           SFG     L    G+        ++AVK       +   + +   LE EI +L S  H N
Sbjct: 12  SFGSVYLALDKDTGE--------LMAVKSVELSGDSEEELEA---LEREIRILSSLQHPN 60

Query: 119 IVTLLGYPQDGLQRRCLVF-EFMQRGSLRWNLREKGGPLDWEKRLAI-ALQIDSANQMVC 176
           IV   G  +D  +    +F E++  GSL  +L +K G L  E  +     QI     +  
Sbjct: 61  IVRYYGSERDEEKNTLNIFLEYVSGGSLS-SLLKKFGKLP-EPVIRKYTRQILEG--LAY 116

Query: 177 MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           ++S   I H +I   NIL+D     KLA FG A
Sbjct: 117 LHSNG-IVHRDIKGANILVDSDGVVKLADFGCA 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 9/122 (7%)

Query: 91  VAVKARR--YMASQTK--LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
           VAVK  +      Q +  L E  +++   H NIV LLG   +  +   +V E+M  G L 
Sbjct: 31  VAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-EPLMIVMEYMPGGDLL 89

Query: 147 WNLREKGGP-LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
             LR+     L     L+ ALQI  A  M  + SK  I H ++ + N L+ E    K++ 
Sbjct: 90  DYLRKNRPKELSLSDLLSFALQI--ARGMEYLESKNFI-HRDLAARNCLVGENLVVKISD 146

Query: 206 FG 207
           FG
Sbjct: 147 FG 148

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 90  VVAVKARRYM---ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRR-CLVFEFMQRGS 144
            VAVK+  +      ++  E EI +L++  H NIV   G  +    R   L+ E++  GS
Sbjct: 35  QVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGS 94

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
           LR  L+     ++ ++ L  + QI     M  + S+  I H ++ + NIL++     K++
Sbjct: 95  LRDYLQRHRDQINLKRLLLFSSQI--CKGMDYLGSQRYI-HRDLAARNILVESEDLVKIS 151

Query: 205 GFGAA 209
            FG A
Sbjct: 152 DFGLA 156

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 25/145 (17%)

Query: 86  RNLTVVAVKARRY--MASQTKLEEEI-LLKSSSHLNIVTLLG--YPQDGLQRRCLVFEFM 140
           R    VA+K  +      + K+  EI +LK   H NIV   G    +D L    +V EF 
Sbjct: 23  RTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELW---IVMEFC 79

Query: 141 QRGSLRWNLREKGGPLDWEKRLAI-------ALQIDSANQMVCMYSKPPIYHGNITSDNI 193
             GSL+  L+     L  E ++A         L+   +N ++         H +I + NI
Sbjct: 80  SGGSLKDLLKSTNQTLT-ESQIAYVCKELLKGLEYLHSNGII---------HRDIKAANI 129

Query: 194 LLDELCNAKLAGFGAANYCSGGSNR 218
           LL      KL  FG +   S    R
Sbjct: 130 LLTSDGEVKLIDFGLSAQLSDTKAR 154

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 52.5 bits (126), Expect = 5e-08
 Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 17/142 (11%)

Query: 86  RNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR--CLVFEFMQ 141
           R    VA+K  R   M+    +EE  ++   SH N+V L G      ++R   +V E+M 
Sbjct: 26  RGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGV---CTKQRPIFIVTEYMA 82

Query: 142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
            G L   LRE+ G L  E  L +   +  A  M  + S   I H ++ + N L+ E    
Sbjct: 83  NGCLLNYLRERKGKLGTEWLLDMCSDVCEA--MEYLESNGFI-HRDLAARNCLVGEDNVV 139

Query: 202 KLAGFGAANY-------CSGGS 216
           K++ FG A Y        S G+
Sbjct: 140 KVSDFGLARYVLDDQYTSSQGT 161

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 17/137 (12%)

Query: 91  VAVKARRYMASQTK--LEEEI-LLKSSSHLNIVTLLG-YPQDGLQRRCL--VFEFMQRGS 144
           VA+K  R +  Q K  +  EI ++K   H NIV     Y    L    L  V E+M  GS
Sbjct: 47  VAIKKMR-LRKQNKELIINEILIMKDCKHPNIVDYYDSY----LVGDELWVVMEYMDGGS 101

Query: 145 LRWNLREKGGPLDWEKRLA-IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
           L   + +    ++ E ++A +  ++     +  ++S+  I H +I SDNILL +  + KL
Sbjct: 102 LTDIITQNFVRMN-EPQIAYVCREVLQG--LEYLHSQNVI-HRDIKSDNILLSKDGSVKL 157

Query: 204 AGFG-AANYCSGGSNRR 219
           A FG AA      S R 
Sbjct: 158 ADFGFAAQLTKEKSKRN 174

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 50.1 bits (118), Expect = 6e-07
 Identities = 53/196 (27%), Positives = 75/196 (38%), Gaps = 27/196 (13%)

Query: 86  RNLTVVAVKA-------RRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
           R+  +VA+K        +     +   E +IL   +   NIV L  + QD      LV E
Sbjct: 20  RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE-GSLYLVME 78

Query: 139 FMQRGSLRWNLREKG--GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD 196
           ++  GSL   L++ G  GPL   + L I  QI SA   +       I H +I  +NILLD
Sbjct: 79  YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSA---LEYLHSKGIIHRDIKPENILLD 135

Query: 197 E-LCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVGGQECLDQRLYIPNEKFKIT 255
                 KL  FG A          +   TS +    +  VG         Y+  E     
Sbjct: 136 RDGRVVKLIDFGLA------KLLPDPGSTSSIPALPSTSVG------TPGYMAPEVLLGL 183

Query: 256 SLAKLG-DIEKWCISC 270
           SLA      + W +  
Sbjct: 184 SLAYASSSSDIWSLGI 199

Length = 384

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 8e-07
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 5/121 (4%)

Query: 91  VAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
           VAVK  +    A+Q  L E  ++ +  H N+V LLG    G     +V E+M +GSL   
Sbjct: 32  VAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG-NPLYIVTEYMAKGSLVDY 90

Query: 149 LREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
           LR +G  +       +   +D    M  +  K    H ++ + N+L+ E   AK++ FG 
Sbjct: 91  LRSRGRAVI-TLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGL 148

Query: 209 A 209
           A
Sbjct: 149 A 149

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 106 EEEI-LLKSSSHLNIVTLLGY---PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
           E EI  L+     NI+ + G+     D L R  L+ E+  RG LR  + +K   L ++ +
Sbjct: 66  ENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLR-EVLDKEKDLSFKTK 124

Query: 162 LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
           L +A  ID    +  +Y      + N+TS + L+ E
Sbjct: 125 LDMA--IDCCKGLYNLYKYTNKPYKNLTSVSFLVTE 158

Length = 283

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 82  RAVSRNLTVVAVKA-RRYMASQTK---LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVF 137
           + V +  T VAVK  R  +    K   L+E  +LK   H NIV L+G      Q   +V 
Sbjct: 13  KGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK-QPIYIVM 71

Query: 138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
           E +  GSL   LR+K   L  +K L ++L  D+A  M  + SK  I H ++ + N L+ E
Sbjct: 72  ELVPGGSLLTFLRKKKNRLTVKKLLQMSL--DAAAGMEYLESKNCI-HRDLAARNCLVGE 128

Query: 198 LCNAKLAGFG 207
               K++ FG
Sbjct: 129 NNVLKISDFG 138

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 35/163 (21%)

Query: 86  RNLTVVAVKARRYMAS-QTKLE---EEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ 141
              T+VAVK  +  AS   + +   E  L+    H NIV LLG    G +  CL+FE+M 
Sbjct: 33  EPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG-KPMCLLFEYMA 91

Query: 142 RGSLRWNLREKGG---------------------PLDWEKRLAIALQIDSANQMVCMYSK 180
            G L   LR +                       PL   ++L IA Q+  A  M  + S+
Sbjct: 92  YGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQV--AAGMAYL-SE 148

Query: 181 PPIYHGNITSDNILLDELCNAKLAGFG------AANYCSGGSN 217
               H ++ + N L+ E    K+A FG      +A+Y     N
Sbjct: 149 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASEN 191

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 45/151 (29%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 67  SFGDSVEGLTLIKGDR-AVSRNLTVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLG 124
           SFG   EGL L  GD  AV         +  +    Q  LE+EI LL    H NIV  LG
Sbjct: 12  SFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQ--LEQEIALLSKLQHPNIVQYLG 69

Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLD------WEKRLAIALQIDSANQMVCMY 178
             ++      +  E +  GSL   L +K G         + +++ + L+       V   
Sbjct: 70  TEREE-DNLYIFLELVPGGSLA-KLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTV--- 124

Query: 179 SKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
                 H +I   NIL+D     KLA FG A
Sbjct: 125 ------HRDIKGANILVDTNGVVKLADFGMA 149

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 46.3 bits (110), Expect = 6e-06
 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 23/138 (16%)

Query: 89  TVVAVKARRYMAS---QTKLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           T VA+K  +  A    Q +  +E  L S   H NIV LLG      Q  C++FE++  G 
Sbjct: 36  TSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE-QPTCMLFEYLAHGD 94

Query: 145 LRWNL---------------REKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT 189
           L   L                     LD    L IA+QI +  + +   S     H ++ 
Sbjct: 95  LHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHRDLA 151

Query: 190 SDNILLDELCNAKLAGFG 207
           + N L+ E    K++ FG
Sbjct: 152 ARNCLVGEGLTVKISDFG 169

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 46.2 bits (109), Expect = 8e-06
 Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 24/174 (13%)

Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE- 106
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT  + 
Sbjct: 5   SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 62

Query: 107 ---EEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 63  AYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQME----LDH 118

Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 119 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 87  NLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR--CLVFEFMQR 142
               VA+K  R   M+ +  +EE  ++   SH  +V L G      +R   CLVFEFM+ 
Sbjct: 27  EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC---TERSPICLVFEFMEH 83

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G L   LR + G    E  L + L  D    M  + S   I H ++ + N L+ E    K
Sbjct: 84  GCLSDYLRAQRGKFSQETLLGMCL--DVCEGMAYLESSNVI-HRDLAARNCLVGENQVVK 140

Query: 203 LAGFG 207
           ++ FG
Sbjct: 141 VSDFG 145

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 89  TVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQRGSLR 146
            VVA+K         ++ +EI +LK      IV   G Y ++      +V E+   GS+ 
Sbjct: 29  QVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNT--DLWIVMEYCGAGSVS 86

Query: 147 WNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
             ++     L  E+ +A  L   +   +  ++S   I H +I + NILL+E   AKLA F
Sbjct: 87  DIMKITNKTLT-EEEIAAILY-QTLKGLEYLHSNKKI-HRDIKAGNILLNEEGQAKLADF 143

Query: 207 GAA 209
           G +
Sbjct: 144 GVS 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)

Query: 105 LEEEILLKSSSHLNIVTLLG--YPQDGLQRRCLVFEFMQRGSLRWNLR-EKGGPLDWEKR 161
           L+E I++K  SH N+++LLG   P +G     +V  +M+ G LR  +R E   P    K 
Sbjct: 44  LKEGIIMKDFSHPNVLSLLGICLPSEGSP--LVVLPYMKHGDLRNFIRSETHNPT--VKD 99

Query: 162 LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           L I   +  A  M  + SK  + H ++ + N +LDE    K+A FG A
Sbjct: 100 L-IGFGLQVAKGMEYLASKKFV-HRDLAARNCMLDESFTVKVADFGLA 145

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 43.1 bits (101), Expect = 9e-05
 Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 24/174 (13%)

Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE- 106
           SV +A  T  +LKR + LK  G   +G+     D  +  N+ V   K  R   +QT  + 
Sbjct: 9   SVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKR 66

Query: 107 ---EEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +LLK  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 67  AYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHME----LDH 122

Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 123 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)

Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE- 106
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT  + 
Sbjct: 12  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69

Query: 107 ---EEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 70  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125

Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 34/158 (21%)

Query: 90  VVAVKARRYM----ASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
            VA+K          +   + +EI LLK+  H NIV  +G  +       ++ E+ + GS
Sbjct: 27  FVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-DSLYIILEYAENGS 85

Query: 145 LRWNLREKGGPLDWEKRLAIAL-QIDSA-----NQMVCMYSKPPIYHGNITSDNILLDEL 198
           LR  + +K GP   E  +A+ + Q+         Q V         H +I + NIL  + 
Sbjct: 86  LR-QIIKKFGPFP-ESLVAVYVYQVLQGLAYLHEQGVI--------HRDIKAANILTTKD 135

Query: 199 CNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVG 236
              KLA FG A             K +++++D    VG
Sbjct: 136 GVVKLADFGVAT------------KLNDVSKDDASVVG 161

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 91  VAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCL--VFEFMQRGSLR 146
           VA+KA     M+ +  +EE  ++   SH  +V L G      Q++ L  V EFM+ G L 
Sbjct: 31  VAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGV---CTQQKPLYIVTEFMENGCLL 87

Query: 147 WNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
             LR++ G L  +  L++   +    + +    +    H ++ + N L+      K++ F
Sbjct: 88  NYLRQRQGKLSKDMLLSMCQDVCEGMEYL---ERNSFIHRDLAARNCLVSSTGVVKVSDF 144

Query: 207 GAANY 211
           G   Y
Sbjct: 145 GMTRY 149

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 7/127 (5%)

Query: 86  RNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
              T VAVK  +   M+ +  L+E  ++K   H  +V L     +  +   +V E+M +G
Sbjct: 28  NGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE-EPIYIVTEYMSKG 86

Query: 144 SLRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           SL   L+  +G  L   + + +A QI  A  M  + S+  I H ++ + NIL+ E    K
Sbjct: 87  SLLDFLKSGEGKKLRLPQLVDMAAQI--AEGMAYLESRNYI-HRDLAARNILVGENLVCK 143

Query: 203 LAGFGAA 209
           +A FG A
Sbjct: 144 IADFGLA 150

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 21/136 (15%)

Query: 89  TVVAVKARRYMASQTKLE----EEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
            +VAVK  +  AS    +    E  LL +  H NIV   G   +G     +VFE+M+ G 
Sbjct: 36  ELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP-IMVFEYMEHGD 94

Query: 145 LRWNLREKG-------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD 191
           L   LR  G             G L   + L IA+QI S   MV + S+  + H ++ + 
Sbjct: 95  LNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASG--MVYLASQHFV-HRDLATR 151

Query: 192 NILLDELCNAKLAGFG 207
           N L+      K+  FG
Sbjct: 152 NCLVGYDLVVKIGDFG 167

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 14/148 (9%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
           FGD  +G+ +   +  ++     VAVK  +   S +     L+E  +++   H +IV L+
Sbjct: 19  FGDVYQGVYMSPENEKIA-----VAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLI 73

Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
           G   +      +V E    G LR  L+     LD    +  + Q+ +A  +  + SK  +
Sbjct: 74  GVITE--NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTA--LAYLESKRFV 129

Query: 184 YHGNITSDNILLDELCNAKLAGFGAANY 211
            H +I + N+L+      KL  FG + Y
Sbjct: 130 -HRDIAARNVLVSSPDCVKLGDFGLSRY 156

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 17/143 (11%)

Query: 104 KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCL--VFEFMQRGSLRWNLREKGGPLDWEKR 161
           K+E+E+L + + H  I+ L    QD      L  V E+   G L      K G LD +  
Sbjct: 49  KIEKEVLTRLNGHPGIIKLYYTFQD---EENLYFVLEYAPNGEL-LQYIRKYGSLDEKCT 104

Query: 162 LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN-YCSGGSNRRN 220
              A +I  A +   ++SK  I H ++  +NILLD+  + K+  FG A       S   N
Sbjct: 105 RFYAAEILLALEY--LHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN 161

Query: 221 CEKTSEMAEDIND-------FVG 236
               + +   I         FVG
Sbjct: 162 KGDATNIDSQIEKNRRRFASFVG 184

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 21/136 (15%)

Query: 89  TVVAVKARRYMASQTKLE---EEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
            +VAVKA +  +   + +   E  LL    H +IV   G   +G +   +VFE+M+ G L
Sbjct: 36  MLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEG-RPLLMVFEYMRHGDL 94

Query: 146 RWNLREKG--------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD 191
              LR  G              G L   + LAIA QI  A+ MV + S   + H ++ + 
Sbjct: 95  NRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI--ASGMVYLASLHFV-HRDLATR 151

Query: 192 NILLDELCNAKLAGFG 207
           N L+ +    K+  FG
Sbjct: 152 NCLVGQGLVVKIGDFG 167

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 10/114 (8%)

Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW---NLREKGGPLDWEKR 161
           LE+EIL K +S   IV L  Y  +     CLV   M  G L++   N+ E+G  L+ E+ 
Sbjct: 42  LEKEILEKVNS-PFIVNL-AYAFESKTHLCLVMSLMNGGDLKYHIYNVGERG--LEMERV 97

Query: 162 LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG 215
           +  + QI     ++ ++S   +Y  ++  +N+LLD+  N +L+  G A     G
Sbjct: 98  IHYSAQITCG--ILHLHSMDIVYR-DMKPENVLLDDQGNCRLSDLGLAVELKDG 148

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 7/121 (5%)

Query: 91  VAVKARRY-MASQTKLEEEILLKSSSHLNIVTLLGYP-QDGLQRRCLVFEFMQRGSLRWN 148
           VAVK  +  + +Q  LEE  ++    H N+V LLG    +GL    +V E M +G+L   
Sbjct: 32  VAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLY---IVMELMSKGNLVNF 88

Query: 149 LREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA 208
           LR +G  L    +L +   +D A  M  + SK  + H ++ + NIL+ E   AK++ FG 
Sbjct: 89  LRTRGRALVSVIQL-LQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGL 146

Query: 209 A 209
           A
Sbjct: 147 A 147

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 24/158 (15%)

Query: 67  SFGDSVEGL--TLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIV 120
           SFG   EGL   ++KG+       T VA+K     AS  +    L E  ++K  +  ++V
Sbjct: 18  SFGMVYEGLAKGVVKGEPE-----TRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVV 72

Query: 121 TLLGYPQDGLQRRCLVFEFMQRGSLRWNLREK---------GGPLDWEKRLAIALQIDSA 171
            LLG    G Q   +V E M +G L+  LR +          GP   +K + +A +I  A
Sbjct: 73  RLLGVVSTG-QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEI--A 129

Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           + M  + +K    H ++ + N ++ E    K+  FG  
Sbjct: 130 DGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFGMT 166

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 16/138 (11%)

Query: 90  VVAVKARRYMAS-------QTKLEEEILLKSSSHLNIVTLL-GYPQDGLQRRCLVFEFMQ 141
           +VA+K  ++  S       +T L E  +L+   H NIV L   + + G  R  LVFE+++
Sbjct: 28  IVAIK--KFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG--RLYLVFEYVE 83

Query: 142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
           R +L   L    G L  +   +   Q+  A  +   +S   I H +I  +NIL+ E    
Sbjct: 84  R-TLLELLEASPGGLPPDAVRSYIWQLLQA--IAYCHSHN-IIHRDIKPENILVSESGVL 139

Query: 202 KLAGFGAANYCSGGSNRR 219
           KL  FG A          
Sbjct: 140 KLCDFGFARALRARPASP 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 39.9 bits (93), Expect = 8e-04
 Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 15/158 (9%)

Query: 59  LKRRRMLKS--FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS 115
           L++ ++L S  FG   +G+ + +GD ++   + +  ++ R    +  ++ + +L + S  
Sbjct: 9   LRKLKLLGSGVFGTVHKGIWIPEGD-SIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLD 67

Query: 116 HLNIVTLLGY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQM 174
           H  IV LLG  P   LQ   LV +    GSL  ++R+    LD ++ L   +QI      
Sbjct: 68  HAYIVRLLGICPGASLQ---LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKG--- 121

Query: 175 VCMY--SKPPIYHGNITSDNILLDELCNAKLAGFGAAN 210
             MY   +  + H N+ + NILL      ++A FG A+
Sbjct: 122 --MYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVAD 157

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 7/126 (5%)

Query: 87  NLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           N T VAVK  +   M+ Q  LEE  L+K+  H  +V L        +   ++ E+M +GS
Sbjct: 29  NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE-EPIYIITEYMAKGS 87

Query: 145 LRWNLR-EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
           L   L+ ++GG +   K +  + QI  A  M  +  K  I H ++ + N+L+ E    K+
Sbjct: 88  LLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIERKNYI-HRDLRAANVLVSESLMCKI 144

Query: 204 AGFGAA 209
           A FG A
Sbjct: 145 ADFGLA 150

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 39.4 bits (93), Expect = 0.001
 Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 108 EI-LLKSSSHLNIVTLLGYPQD---GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLA 163
           EI LLK   H NIV LL    D     ++  LVFE+     L+  L ++ GPL      +
Sbjct: 48  EISLLKELKHPNIVKLL----DVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKS 102

Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS 213
           I  Q+     +   +S   I H ++   NIL++     KLA FG A    
Sbjct: 103 IMYQLLRG--LAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFG 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 6/107 (5%)

Query: 105 LEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVF-EFMQRGSLRWNLREKGGPLDWEKRL 162
           LE EI LLK+  H  IV   G  +D  +++  +F E+M  GS++  L+  G   +   R 
Sbjct: 51  LECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTR- 109

Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
               QI    Q V       I H +I   NIL D   N KL  FGA+
Sbjct: 110 RYTRQI---LQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGAS 153

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 9/110 (8%)

Query: 102 QTKLEEEILLKSSSHLNIVTLLG--YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWE 159
           +T L E  LLK  +H NI+ LL     +  L    LVFEFM    L   ++++   L   
Sbjct: 43  KTALREIKLLKELNHPNIIKLLDVFRHKGDLY---LVFEFMDT-DLYKLIKDRQRGLPES 98

Query: 160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
              +   Q+    Q +       I H ++  +N+L++     KLA FG A
Sbjct: 99  LIKSYLYQL---LQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLA 145

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)

Query: 67  SFGDSVEGLT--LIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNI 119
           +FG  VE     L K D  +      VAVK  +  A  ++ E      +I+    +H NI
Sbjct: 47  AFGKVVEATAYGLSKSDAVMK-----VAVKMLKPTAHSSEREALMSELKIMSHLGNHENI 101

Query: 120 VTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGP-LDWEKRLAIALQIDSANQMVCMY 178
           V LLG    G     ++ E+   G L   LR K    L  E  L+ + Q+  A  M  + 
Sbjct: 102 VNLLGACTIG-GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQV--AKGMAFLA 158

Query: 179 SKPPIYHGNITSDNILLDELCNAKLAGFGAA-------NYCSGGSNR 218
           SK  I H ++ + N+LL      K+  FG A       NY   G+ R
Sbjct: 159 SKNCI-HRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNAR 204

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 21/135 (15%)

Query: 90  VVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRC-------LVFEFM 140
            VAVK  +   M  +  L+E  ++K   H N+V LLG         C       ++ EFM
Sbjct: 33  TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV--------CTREPPFYIITEFM 84

Query: 141 QRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC 199
             G+L   LRE     ++    L +A QI SA  M  +  K  I H ++ + N L+ E  
Sbjct: 85  TYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKKNFI-HRDLAARNCLVGENH 141

Query: 200 NAKLAGFGAANYCSG 214
             K+A FG +   +G
Sbjct: 142 LVKVADFGLSRLMTG 156

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 100 ASQTKLEEEILLKSSSHLNIVTLL-GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDW 158
           A +   +E +LL    H NIV     +  DG     +V E+   G L   ++ + G L  
Sbjct: 41  AVEDSRKEAVLLAKMKHPNIVAFKESFEADG--HLYIVMEYCDGGDLMQKIKLQRGKLFP 98

Query: 159 EKR-LAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E   L   +Q+    Q +    +  + H +I S NI L +    KL  FG+A
Sbjct: 99  EDTILQWFVQMCLGVQHI---HEKRVLHRDIKSKNIFLTQNGKVKLGDFGSA 147

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 38.5 bits (89), Expect = 0.003
 Identities = 47/153 (30%), Positives = 63/153 (41%), Gaps = 10/153 (6%)

Query: 63  RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEI-LLKSSSHL 117
           R+ K  G    G   +  D    R L V  V+        +K    LE EI LLK+  H 
Sbjct: 5   RLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHE 64

Query: 118 NIVTLLGYPQDGLQRRCLVF-EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC 176
            IV   G  +D ++R   +F E M  GS++  L+  G   +   R     QI      V 
Sbjct: 65  RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTR-KYTRQILEG---VS 120

Query: 177 MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
                 I H +I   NIL D + N KL  FGA+
Sbjct: 121 YLHSNMIVHRDIKGANILRDSVGNVKLGDFGAS 153

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 38.3 bits (90), Expect = 0.003
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 9/124 (7%)

Query: 88  LTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQRGSLR 146
           L  + V        Q   E + L    S   +V   G + ++G     +V E+M  GSL 
Sbjct: 31  LKKIHVDGDEEFRKQLLRELKTLRSCESP-YVVKCYGAFYKEG--EISIVLEYMDGGSLA 87

Query: 147 WNLREKGGPLDWEKRLA-IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
            +L +K G +  E  LA IA QI     +  +++K  I H +I   N+L++     K+A 
Sbjct: 88  -DLLKKVGKIP-EPVLAYIARQILKG--LDYLHTKRHIIHRDIKPSNLLINSKGEVKIAD 143

Query: 206 FGAA 209
           FG +
Sbjct: 144 FGIS 147

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 105 LEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLA 163
           LE EI LLK+  H  IV   G  +D  +   +  E+M  GS++  L+  G  L       
Sbjct: 51  LECEIQLLKNLQHERIVQYYGCLRDD-ETLSIFMEYMPGGSVKDQLKAYG-ALTETVTRK 108

Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
              QI    + V       I H +I   NIL D   N KL  FGA+
Sbjct: 109 YTRQI---LEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGAS 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	304
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.98
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.98
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.98
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.98
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.98
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.98
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.98
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.98
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.98
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.98
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.98
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.98
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.98
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.98
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.98
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.98
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.98
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.98
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.98
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.98
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.98
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.98
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.98
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.98
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.98
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.98
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.98
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.98
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.98
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.98
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.98
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.98
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.98
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.98
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.97
KOG0605	550	consensus NDR and related serine/threonine kinases	99.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.97
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.97
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.97
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.97
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.97
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.97
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.97
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.97
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.97
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.97
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.97
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.97
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.97
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.97
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.97
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.97
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.97
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.97
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.97
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.97
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.97
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.97
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.97
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.97
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.97
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.97
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.97
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
KOG0584	632	consensus Serine/threonine protein kinase [General	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
PHA03211	461	serine/threonine kinase US3; Provisional	99.97
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.97
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.97
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.97
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.97
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.97
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.97
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.97
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.97
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.97
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.97
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.97
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.97
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.97
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.97
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.97
KOG0586	596	consensus Serine/threonine protein kinase [General	99.97
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.97
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.97
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.97
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.97
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.97
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.97
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.96
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.96
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.96
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.96
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.96
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.96
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.96
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.96
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.96
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.96
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.96
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.96
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.96
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.96
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.96
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.96
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.96
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.96
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.96
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.96
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.96
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.96
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.96
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.96
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.96
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.96
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.96
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.96
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.96
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.96
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.96
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.96
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.96
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.96
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.96
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.96
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.96
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.96
PLN00009	294	cyclin-dependent kinase A; Provisional	99.96
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.96
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.96
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.96
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.96
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.96
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.96
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.96
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.96
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.96
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.96
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.95
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.95
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.95
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.95
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.95
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.95
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.95
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.95
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.95
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.95
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.95
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.95
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.95
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.95
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.95
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.94
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.94
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.94
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.94
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.93
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.93
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.93
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.93
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.93
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.92
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.91
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.91
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.91
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.91
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.91
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.9
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.9
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.9
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.9
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.89
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.89
PRK09188	365	serine/threonine protein kinase; Provisional	99.89
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.89
KOG1152	772	consensus Signal transduction serine/threonine kin	99.89
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.89
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.89
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.88
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.87
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.85
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.84
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.84
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.83
PRK10345	210	hypothetical protein; Provisional	99.82
smart00090	237	RIO RIO-like kinase.	99.81
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.81
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.81
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.8
PLN00181	793	protein SPA1-RELATED; Provisional	99.8
PRK14879	211	serine/threonine protein kinase; Provisional	99.77
PRK12274	218	serine/threonine protein kinase; Provisional	99.76
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.75
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.74
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.74
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.74
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.72
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.71
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.69
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.69
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.68
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.65
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.62
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.58
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.54
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.54
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.51
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.48
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.46
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.4
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.31
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.24
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.23
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.21
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.19
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.17
KOG3087	229	consensus Serine/threonine protein kinase [General	99.14
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.07
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.01
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.97
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.93
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.91
KOG1243	690	consensus Protein kinase [General function predict	98.84
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.75
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.73
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.68
PRK09902	216	hypothetical protein; Provisional	98.62
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.6
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.57
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.5
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.41
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.4
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.4
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.25
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.18
PF01636	239	APH: Phosphotransferase enzyme family This family	98.17
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.06
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.06
PLN02876	822	acyl-CoA dehydrogenase	98.04
PRK10593	297	hypothetical protein; Provisional	97.96
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.94
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.86
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.84
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.62
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.53
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.43
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.36
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.33
PRK05231	319	homoserine kinase; Provisional	97.27
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.2
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.07
PLN02236	344	choline kinase	97.03
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.01
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.95
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.92
COG4248	637	Uncharacterized protein with protein kinase and he	96.87
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.85
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.83
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.54
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.52
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.5
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.47
KOG2270	520	consensus Serine/threonine protein kinase involved	96.46
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.4
PLN02756	418	S-methyl-5-thioribose kinase	96.4
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	95.79
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	95.56
PTZ00384	383	choline kinase; Provisional	95.53
PTZ00296	442	choline kinase; Provisional	95.21
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	95.1
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	94.89
KOG1236	565	consensus Predicted unusual protein kinase [Genera	94.72
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.51
KOG4720	391	consensus Ethanolamine kinase [Lipid transport and	94.35
COG2334	331	Putative homoserine kinase type II (protein kinase	94.23
PRK10271	188	thiK thiamine kinase; Provisional	94.17

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-42  Score=308.72  Aligned_cols=225  Identities=32%  Similarity=0.457  Sum_probs=188.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..|...+.||+|+||.||++.    +.+|..||||++.....+  .+|..|+. +.+++|||+|+++|||.+.+...+||
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~----l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV  150 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGV----LSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV  150 (361)
T ss_pred             hCCchhcceecCCCeEEEEEE----ECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence            567778899999999997554    467799999999887764  47888898 99999999999999999986534999


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC-
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG-  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~-  214 (304)
                      ||||++|+|+++|+.... +++|.++++|+.++|+||+|||+...+.|+||||||+|||+|+++++||+|||+|+.... 
T Consensus       151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~  230 (361)
T KOG1187|consen  151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG  230 (361)
T ss_pred             EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence            999999999999998877 899999999999999999999998888999999999999999999999999999977765 


Q ss_pred             CCC-Ccc-ccc----------Ccccc--cccccCC-----------------------------------CCcceecccc
Q 046594          215 GSN-RRN-CEK----------TSEMA--EDINDFV-----------------------------------GGQECLDQRL  245 (304)
Q Consensus       215 ~~~-~~~-~~~----------~~~~s--~DV~S~~-----------------------------------~~~~~~~~~~  245 (304)
                      ... ... .++          .+..+  +|||||+                                   .-.+++|+.+
T Consensus       231 ~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l  310 (361)
T KOG1187|consen  231 DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRL  310 (361)
T ss_pred             ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCc
Confidence            332 111 333          23344  9999911                                   0117888888


Q ss_pred             CCCC-CCcch-HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          246 YIPN-EKFKI-TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       246 ~~~~-~~~~~-~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                         . ..++. ++...+..++.+|++     .+|..||+|.||+++|+.+...
T Consensus       311 ---~~~~~~~~~~~~~~~~~a~~C~~-----~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  311 ---KEGEYPDEKEVKKLAELALRCLR-----PDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             ---cCCCCChHHHHHHHHHHHHHHcC-----cCCCcCcCHHHHHHHHHhhccc
Confidence               4 55664 678889999999999     9999999999999999776554

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-42  Score=293.25  Aligned_cols=220  Identities=17%  Similarity=0.182  Sum_probs=179.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +...+.++.||+|..|+||++.++.   .++.+|+|++.......   ++.+|+. ++..+||+||.++|+|...+..+.
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~---t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~is  154 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKP---TGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEIS  154 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcC---CCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEE
Confidence            3456778999999999999999984   57999999996544433   7777787 999999999999999998865469


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ++||||++|||++++...+ .+++...-.++.++++||.|||+.+  +||||||||+|||++..|++||||||.++.+..
T Consensus       155 I~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn  231 (364)
T KOG0581|consen  155 ICMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN  231 (364)
T ss_pred             eehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence            9999999999999998876 8999999999999999999998533  699999999999999999999999999998876


Q ss_pred             CCCCcccccCc----------ccc--ccccc------------CCCCc---------ceeccccCCCCCCcchH-HHHHH
Q 046594          215 GSNRRNCEKTS----------EMA--EDIND------------FVGGQ---------ECLDQRLYIPNEKFKIT-SLAKL  260 (304)
Q Consensus       215 ~~~~~~~~~~~----------~~s--~DV~S------------~~~~~---------~~~~~~~~~~~~~~~~~-~~~~l  260 (304)
                      ....+..|+..          .++  +||||            ||-..         +.++....-+....|.+ +++++
T Consensus       232 S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef  311 (364)
T KOG0581|consen  232 SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEF  311 (364)
T ss_pred             hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHH
Confidence            64444455533          333  99999            22211         22222221123556665 89999


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++++..||+     +||.+|||+.|+++|
T Consensus       312 ~~FV~~CL~-----Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  312 RSFVSCCLR-----KDPSERPSAKQLLQH  335 (364)
T ss_pred             HHHHHHHhc-----CCcccCCCHHHHhcC
Confidence            999999999     999999999999986

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-40  Score=288.12  Aligned_cols=219  Identities=23%  Similarity=0.253  Sum_probs=176.5

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---------HHHHHHH-hhCCCCCcccceeeeee
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---------KLEEEIL-LKSSSHLNIVTLLGYPQ  127 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---------~~~~e~~-l~~l~h~niv~~~~~~~  127 (304)
                      +.+.|.+.+.+|.|+||.|-++..+   .+|+.||||+++......         ..++|+. |++++|||||++++++.
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~---~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~  246 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEK---KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE  246 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEc---ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee
Confidence            5677899999999999999999887   468999999997543221         4468888 99999999999999999


Q ss_pred             CCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC---CCeeEc
Q 046594          128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL---CNAKLA  204 (304)
Q Consensus       128 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~---~~~kl~  204 (304)
                      ..+.. |+||||++||+|.+.+-.++ .+.+..-..++.|++.|+.|||+   .||+||||||+|||+..+   ..+||+
T Consensus       247 ~~ds~-YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKIt  321 (475)
T KOG0615|consen  247 VPDSS-YMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKIT  321 (475)
T ss_pred             cCCce-EEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEec
Confidence            98666 99999999999999998887 78999999999999999999955   499999999999999865   789999


Q ss_pred             ccccccccCCCCC-CcccccCcccc---------------ccccc-----------CCCCc-ce----eccccCCC----
Q 046594          205 GFGAANYCSGGSN-RRNCEKTSEMA---------------EDIND-----------FVGGQ-EC----LDQRLYIP----  248 (304)
Q Consensus       205 Dfgla~~~~~~~~-~~~~~~~~~~s---------------~DV~S-----------~~~~~-~~----~~~~~~~~----  248 (304)
                      |||+|+..++..- .+.||++.|.+               .|+||           +++.. +.    +..++...    
T Consensus       322 DFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f  401 (475)
T KOG0615|consen  322 DFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAF  401 (475)
T ss_pred             ccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccc
Confidence            9999999986554 66777733333               69999           22222 11    11111110    


Q ss_pred             CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          249 NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       249 ~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ......+.+++..++|.++|.     .||++|||++|+|+|
T Consensus       402 ~p~~w~~Iseea~dlI~~mL~-----VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  402 GPLQWDRISEEALDLINWMLV-----VDPENRPSADEALNH  437 (475)
T ss_pred             cChhhhhhhHHHHHHHHHhhE-----eCcccCcCHHHHhcC
Confidence            112234568889999999999     999999999999975

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-40  Score=295.51  Aligned_cols=221  Identities=22%  Similarity=0.255  Sum_probs=183.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      ..+..+.||+|.||.||.+.+.+.    ..||+|.++..... +.|.+|+. |++|+|+|||+++|+|..++ .+|||||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~----~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-piyIVtE  281 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGS----TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-PIYIVTE  281 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCC----CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCC-ceEEEEE
Confidence            346678999999999999998643    58999999886554 47778888 99999999999999999885 5599999


Q ss_pred             ecCCCChhhHhhh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          139 FMQRGSLRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+.|+|.++|+. .+..+...+.+.++.|||+||+||   .++++|||||.++||||+++..+||+|||||+...+...
T Consensus       282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YL---es~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y  358 (468)
T KOG0197|consen  282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYL---ESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY  358 (468)
T ss_pred             ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHH---HhCCccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence            9999999999997 444899999999999999999999   555899999999999999999999999999996665554


Q ss_pred             Cccccc-------------Ccccc--cccccCCC--------Cc------------ceeccccCCCCCCcchHHHHHHHH
Q 046594          218 RRNCEK-------------TSEMA--EDINDFVG--------GQ------------ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       218 ~~~~~~-------------~~~~s--~DV~S~~~--------~~------------~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ....+.             .+.++  ||||||+.        +.            +.+++..   +-.-|..|+..+.+
T Consensus       359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~Gy---Rlp~P~~CP~~vY~  435 (468)
T KOG0197|consen  359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGY---RLPRPEGCPDEVYE  435 (468)
T ss_pred             eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccC---cCCCCCCCCHHHHH
Confidence            222222             44455  99999221        11            4455555   56678889999999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +|..||.     .+|++|||+..+...|+.+....
T Consensus       436 lM~~CW~-----~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  436 LMKSCWH-----EDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             HHHHHhh-----CCcccCCCHHHHHHHHHHhhhcc
Confidence            9999999     99999999999999998886644

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-41  Score=295.01  Aligned_cols=222  Identities=18%  Similarity=0.229  Sum_probs=178.4

Q ss_pred             HHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--hh--HHHHHHHhhCCC-CCcccceeeeeeCCC
Q 046594           56 LAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--QT--KLEEEILLKSSS-HLNIVTLLGYPQDGL  130 (304)
Q Consensus        56 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~~--~~~~e~~l~~l~-h~niv~~~~~~~~~~  130 (304)
                      ..++.||++++++|.|.||.||++..+   ..|..||||+++....  ++  .++|...|++++ ||||+++.+++.+.+
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~---~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~   82 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSK---ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND   82 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeec---CCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC
Confidence            346789999999999999999999876   4578999999986432  22  555555599998 999999999999997


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ..+|+|||||+. +|+++++.++..+++..+..|+.||++||+|+|.+   |+.|||+||+|||+..+..+||+|||+|+
T Consensus        83 ~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLAR  158 (538)
T KOG0661|consen   83 RILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAR  158 (538)
T ss_pred             ceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccc
Confidence            788999999977 99999999988999999999999999999999664   99999999999999988899999999999


Q ss_pred             ccCCCCCCc----cccc--------Ccccc--ccccc--------------CCCCc------------------------
Q 046594          211 YCSGGSNRR----NCEK--------TSEMA--EDIND--------------FVGGQ------------------------  238 (304)
Q Consensus       211 ~~~~~~~~~----~~~~--------~~~~s--~DV~S--------------~~~~~------------------------  238 (304)
                      .+......+    ++.+        .++|+  .|||+              ||+..                        
T Consensus       159 ev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~  238 (538)
T KOG0661|consen  159 EVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY  238 (538)
T ss_pred             ccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence            987665522    2222        66666  89999              44433                        


Q ss_pred             ---ceeccccCC----CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          239 ---ECLDQRLYI----PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       239 ---~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                         ..+.-.+..    +-...-..++.++.+++.+|+.     +||++|||+.++++|
T Consensus       239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~-----WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLA-----WDPDKRPTASQALQH  291 (538)
T ss_pred             HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhc-----CCCccCccHHHHhcC
Confidence               011111100    0011223467889999999999     999999999999986

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.4e-40  Score=298.17  Aligned_cols=217  Identities=23%  Similarity=0.209  Sum_probs=182.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----h-hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----Q-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ++|+..+.||+|||+.+|.+++.   ..|+.||+|++.....    + +.+..|+. .+.++|||||+++++|++.++. 
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~---~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nV-   93 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDL---DTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNV-   93 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEc---CCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCce-
Confidence            57999999999999999999985   3579999999986322    2 26777787 9999999999999999999555 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+|.|+|++++|.+++++.. ++++.++..++.||+.||.|||+.   +|+|||||..|+|++++.++||+|||||..+.
T Consensus        94 YivLELC~~~sL~el~Krrk-~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le  169 (592)
T KOG0575|consen   94 YIVLELCHRGSLMELLKRRK-PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLE  169 (592)
T ss_pred             EEEEEecCCccHHHHHHhcC-CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeec
Confidence            99999999999999999655 899999999999999999999664   89999999999999999999999999999998


Q ss_pred             CC-CC-CcccccCcccc------------ccccc-----------CCCCc----ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          214 GG-SN-RRNCEKTSEMA------------EDIND-----------FVGGQ----ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       214 ~~-~~-~~~~~~~~~~s------------~DV~S-----------~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .. +. .+.||++.|++            +||||           .|+.+    +-.-..++.....+|...+..+.+||
T Consensus       170 ~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI  249 (592)
T KOG0575|consen  170 YDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLI  249 (592)
T ss_pred             CcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHH
Confidence            65 33 77888866666            99999           44444    11112222233456778889999999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .++|+     +||.+|||+++|+.|
T Consensus       250 ~~lL~-----~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  250 RKLLR-----PNPSERPSLDEVLDH  269 (592)
T ss_pred             HHHhc-----CCcccCCCHHHHhcC
Confidence            99999     999999999999975

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2e-38  Score=283.43  Aligned_cols=223  Identities=23%  Similarity=0.254  Sum_probs=179.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .....+.+|.|+||+||.+.+++.    ..||||++......    ..|+.|+. |++++|||||+++|+|.+....+++
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~----~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i  117 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGT----DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI  117 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCc----eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence            345556699999999999988743    23999999865422    27888888 9999999999999999998645699


Q ss_pred             EEeecCCCChhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-eeecCCCCCCeeeCCCC-CeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKPP-IYHGNITSDNILLDELC-NAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~-ivH~dlkp~Nill~~~~-~~kl~Dfgla~~~  212 (304)
                      ||||+++|+|.++++.. ...+++..++.++.|||+||+|||+.   + ||||||||+|||++.++ ++||+|||+++..
T Consensus       118 VtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~  194 (362)
T KOG0192|consen  118 VTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREK  194 (362)
T ss_pred             EEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence            99999999999999983 55899999999999999999999664   5 99999999999999998 9999999999877


Q ss_pred             CCCC-C-Cccccc---------Cc---ccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHH
Q 046594          213 SGGS-N-RRNCEK---------TS---EMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       213 ~~~~-~-~~~~~~---------~~---~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~  256 (304)
                      .... . ....|+         .+   .++  +||||              |....      .+.....   +..+|..+
T Consensus       195 ~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~---Rp~~p~~~  271 (362)
T KOG0192|consen  195 VISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL---RPPIPKEC  271 (362)
T ss_pred             ccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC---CCCCCccC
Confidence            6532 2 223333         22   244  99999              11111      2223444   56677779


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ...+..++.+||.     .||.+||++.+++..|+.+.....
T Consensus       272 ~~~l~~l~~~CW~-----~dp~~RP~f~ei~~~l~~~~~~~~  308 (362)
T KOG0192|consen  272 PPHLSSLMERCWL-----VDPSRRPSFLEIVSRLESIMSHIS  308 (362)
T ss_pred             CHHHHHHHHHhCC-----CCCCcCCCHHHHHHHHHHHHHhhc
Confidence            9999999999999     999999999999999999877443

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=3.3e-39  Score=270.38  Aligned_cols=217  Identities=20%  Similarity=0.230  Sum_probs=167.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHHhhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEILLKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|+.+.++|+|+||.||+|+++.   .|+.||||++.....+.     .++|...|++++|+|+|.++++|... ..++
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~---TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk-rklh   77 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKD---TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRK-RKLH   77 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCC---cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhc-ceeE
Confidence            589999999999999999999985   48999999998765543     44444449999999999999999988 5569


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||+|||+. ++.+-++.....++...+..++.|++.|+.|+|..   ++|||||||+|||++.+|.+||||||+|+.+..
T Consensus        78 LVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~  153 (396)
T KOG0593|consen   78 LVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA  153 (396)
T ss_pred             EEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence            99999988 66677777777899999999999999999999654   899999999999999999999999999998874


Q ss_pred             C-CCCcccc-c-----------Ccccc--ccccc--------------CCCCc--------------------ceecccc
Q 046594          215 G-SNRRNCE-K-----------TSEMA--EDIND--------------FVGGQ--------------------ECLDQRL  245 (304)
Q Consensus       215 ~-~~~~~~~-~-----------~~~~s--~DV~S--------------~~~~~--------------------~~~~~~~  245 (304)
                      . ..++... +           .-.|.  .|||+              +|+..                    +++..+-
T Consensus       154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~  233 (396)
T KOG0593|consen  154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP  233 (396)
T ss_pred             CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence            3 3322222 2           11222  89999              22222                    1111100


Q ss_pred             -----CCC--CC--Ccc---hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          246 -----YIP--NE--KFK---ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       246 -----~~~--~~--~~~---~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                           ..|  ..  ..+   +..+.-+.++++.||.     .||++|++.+|++.|
T Consensus       234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~-----~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLK-----MDPDDRLSCEQLLHH  284 (396)
T ss_pred             ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhc-----CCccccccHHHHhcC
Confidence                 000  11  111   2334578899999999     999999999999964

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.8e-40  Score=271.33  Aligned_cols=222  Identities=19%  Similarity=0.203  Sum_probs=176.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeee-eCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYP-QDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~-~~~~~~  132 (304)
                      +..|++++.||+|.||.||++.+.   .+|..+|.|.+.......    ..-.|+. |++++|||||+++++- .+++..
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~---~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ev   94 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCL---LDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEV   94 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeec---cCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchh
Confidence            457999999999999999999886   578999999998554333    5566777 9999999999999954 444444


Q ss_pred             eEEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKP-PIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      ++||||||.+|+|.+.+...   ...+++..+|+++.|+++||..+|....+ .|+||||||.||+++.+|.+||+|||+
T Consensus        95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL  174 (375)
T KOG0591|consen   95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGL  174 (375)
T ss_pred             hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchh
Confidence            79999999999999988754   33899999999999999999999873332 388999999999999999999999999


Q ss_pred             ccccCCCCC--CcccccCcccc------------ccccc--------------CCCCc------ceeccccCCCCCCcc-
Q 046594          209 ANYCSGGSN--RRNCEKTSEMA------------EDIND--------------FVGGQ------ECLDQRLYIPNEKFK-  253 (304)
Q Consensus       209 a~~~~~~~~--~~~~~~~~~~s------------~DV~S--------------~~~~~------~~~~~~~~~~~~~~~-  253 (304)
                      ++++....+  .+..|++.+|+            +||||              |.+..      .+-....    ...| 
T Consensus       175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~----~~~p~  250 (375)
T KOG0591|consen  175 GRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY----PPLPD  250 (375)
T ss_pred             HhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC----CCCcH
Confidence            999987766  56677766665            99999              33322      2222222    2234 


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      ...+..+.+|+..|+.     .||++||+...++..+.+
T Consensus       251 ~~YS~~l~~li~~ci~-----vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  251 EHYSTDLRELINMCIA-----VDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HHhhhHHHHHHHHHcc-----CCcccCCCcchHHHHHHH
Confidence            5678899999999999     999999986555555443

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-38  Score=271.31  Aligned_cols=214  Identities=23%  Similarity=0.224  Sum_probs=167.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ...|...++||.|.||+||+++++   .++..||||.+.....    .+.+..|+. |+.++|||||++++++..++ .+
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~---~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~-~i   84 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHK---KSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD-FI   84 (429)
T ss_pred             cccceehhhccCcceEEEEEeEec---cCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-eE
Confidence            457889999999999999999998   4579999999987642    225566777 99999999999999999984 55


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC------CCeeEcccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL------CNAKLAGFG  207 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~------~~~kl~Dfg  207 (304)
                      |||||||.||+|.++++..+ .+++.++..++.|++.||++||+.   +||||||||.|||++.+      -.+||+|||
T Consensus        85 ~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG  160 (429)
T KOG0595|consen   85 YLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG  160 (429)
T ss_pred             EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence            99999999999999999988 899999999999999999999655   79999999999999864      468999999


Q ss_pred             cccccCCCCC-CcccccCcccc------------ccccc-----------CCCCc-----cee-----ccccCCCCCCcc
Q 046594          208 AANYCSGGSN-RRNCEKTSEMA------------EDIND-----------FVGGQ-----ECL-----DQRLYIPNEKFK  253 (304)
Q Consensus       208 la~~~~~~~~-~~~~~~~~~~s------------~DV~S-----------~~~~~-----~~~-----~~~~~~~~~~~~  253 (304)
                      +|+.+..... .+.+|++.||+            +|+||           .++..     +.+     +..+   ...++
T Consensus       161 fAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~---~~~~~  237 (429)
T KOG0595|consen  161 FARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI---VPVLP  237 (429)
T ss_pred             hhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc---cCchh
Confidence            9999988776 77788755555            88888           11111     111     1222   22333


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      ...+..+.+++..-+.     .+|.+|-+..+-+.
T Consensus       238 ~~~s~~~~~Ll~~ll~-----~~~~~~~~~~~~~~  267 (429)
T KOG0595|consen  238 AELSNPLRELLISLLQ-----RNPKDRISFEDFFD  267 (429)
T ss_pred             hhccCchhhhhhHHHh-----cCccccCchHHhhh
Confidence            3444555566666667     77777777665544

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-37  Score=265.88  Aligned_cols=220  Identities=23%  Similarity=0.204  Sum_probs=175.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCC-ceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-RRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~-~~~l  135 (304)
                      .++...+.||+|.||.||++.++   ++|...|||.........  .+++|+. |++++|||||+++|......+ .+++
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~---~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i   93 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNK---KTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI   93 (313)
T ss_pred             chhhhhccccCccceEEEEEEec---CCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence            35788899999999999999986   347999999998763322  5777888 999999999999998655544 5699


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~~~  214 (304)
                      .|||+++|+|.+++.+.++.+++..+..+.+|+++||+|||   ++|++||||||+|||++. ++.+||+|||+++....
T Consensus        94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            99999999999999998767999999999999999999995   459999999999999999 79999999999987763


Q ss_pred             --CC---CCccccc----------Cccc---cccccc--------C---CCCcc----------eeccccCCCCCCcchH
Q 046594          215 --GS---NRRNCEK----------TSEM---AEDIND--------F---VGGQE----------CLDQRLYIPNEKFKIT  255 (304)
Q Consensus       215 --~~---~~~~~~~----------~~~~---s~DV~S--------~---~~~~~----------~~~~~~~~~~~~~~~~  255 (304)
                        ..   .....|+          .+..   .+||||        +   +++.+          +.....   ...+|..
T Consensus       171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~---~P~ip~~  247 (313)
T KOG0198|consen  171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDS---LPEIPDS  247 (313)
T ss_pred             ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCC---CCCCCcc
Confidence              11   1222333          2222   389999        1   11111          111111   2467788


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          256 SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       256 ~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+....+++.+|+.     .||++|||+.++++|---.
T Consensus       248 ls~~a~~Fl~~C~~-----~~p~~Rpta~eLL~hpf~~  280 (313)
T KOG0198|consen  248 LSDEAKDFLRKCFK-----RDPEKRPTAEELLEHPFLK  280 (313)
T ss_pred             cCHHHHHHHHHHhh-----cCcccCcCHHHHhhChhhh
Confidence            88999999999999     9999999999999986443

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.5e-37  Score=291.36  Aligned_cols=220  Identities=24%  Similarity=0.312  Sum_probs=184.3

Q ss_pred             ccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           65 LKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      .+.||+|+||.||++...+..  .+...||||.++......   +|++|+. +..++|||||+++|+|..++.. ++|+|
T Consensus       491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~-~MvFE  569 (774)
T KOG1026|consen  491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL-CMVFE  569 (774)
T ss_pred             hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee-EEEEE
Confidence            568999999999999987665  456789999999877663   9999999 9999999999999999999777 99999


Q ss_pred             ecCCCChhhHhhhcCC-------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          139 FMQRGSLRWNLREKGG-------------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~-------------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                      ||..|||.++|+.+.+             +|+..+.+.|+.|||.||+||.+.   .+|||||..+|+||.++..+||+|
T Consensus       570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKIsD  646 (774)
T KOG1026|consen  570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKISD  646 (774)
T ss_pred             ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEecc
Confidence            9999999999986532             388999999999999999999665   499999999999999999999999


Q ss_pred             cccccccCCCCCCccccc--------------Ccccc--ccccc--------CCCCc---------ce----eccccCCC
Q 046594          206 FGAANYCSGGSNRRNCEK--------------TSEMA--EDIND--------FVGGQ---------EC----LDQRLYIP  248 (304)
Q Consensus       206 fgla~~~~~~~~~~~~~~--------------~~~~s--~DV~S--------~~~~~---------~~----~~~~~~~~  248 (304)
                      ||+++.+-...++...+.              .+.+|  +||||        |.-+.         ++    -+.++   
T Consensus       647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l---  723 (774)
T KOG1026|consen  647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL---  723 (774)
T ss_pred             cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc---
Confidence            999998766555222211              66666  99999        11111         22    22333   


Q ss_pred             CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          249 NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       249 ~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                       -+.|++|+.++++||..||+     .+|.+||+++||-..|+......
T Consensus       724 -L~~Pe~CP~~vY~LM~~CW~-----~~P~~RPsF~eI~~~L~~~~~~s  766 (774)
T KOG1026|consen  724 -LSCPENCPTEVYSLMLECWN-----ENPKRRPSFKEIHSRLQAWAQAS  766 (774)
T ss_pred             -ccCCCCCCHHHHHHHHHHhh-----cCcccCCCHHHHHHHHHHHHhcC
Confidence             56789999999999999999     99999999999999999887643

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=4.4e-37  Score=253.30  Aligned_cols=217  Identities=20%  Similarity=0.217  Sum_probs=172.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHHhhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEILLKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +||...+.+|+|.||.||++.+..   .|+.||||+++.....+     .++|...|+.++|+||+.++++|.+.++- .
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~---t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l-~   77 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTE---TGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNL-S   77 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecC---CCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCce-E
Confidence            589999999999999999999874   57999999999876554     45555559999999999999999998555 9


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||+||++. +|+..++.....+...+...|+.++++|++|||..   .|+||||||.|+|++++|.+||+|||+|+.+..
T Consensus        78 lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~  153 (318)
T KOG0659|consen   78 LVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGS  153 (318)
T ss_pred             EEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence            99999987 99999999888999999999999999999999665   799999999999999999999999999999876


Q ss_pred             CCC--Cccccc-----------Ccccc--ccccc--------------CCCCc------------------------cee
Q 046594          215 GSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ------------------------ECL  241 (304)
Q Consensus       215 ~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~------------------------~~~  241 (304)
                      ...  .....+           ...|.  .||||              |++..                        ..-
T Consensus       154 p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  154 PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence            554  111222           23333  89999              22222                        111


Q ss_pred             c----cccC-CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 D----QRLY-IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 ~----~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      |    .... .+....-..++..+.+++.+++.     .||.+|+|+.|+++|
T Consensus       234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~-----ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLT-----YNPKKRITASQALKH  281 (318)
T ss_pred             cHHHHhcCCCCccccccccccHHHHHHHHhhhc-----cCchhcccHHHHhcc
Confidence            1    0000 01122334566778999999999     999999999999976

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-37  Score=283.12  Aligned_cols=223  Identities=17%  Similarity=0.194  Sum_probs=189.7

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||.|.||.|+..+-+...+....||||.++....+.   +|..|.. |.++.||||++|.|+....... +||+|||+
T Consensus       635 ~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~Pv-MIiTEyME  713 (996)
T KOG0196|consen  635 KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPV-MIITEYME  713 (996)
T ss_pred             EEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCcee-EEEhhhhh
Confidence            57899999999999887666667899999999765544   7777777 9999999999999998887444 99999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Cc
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RR  219 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~  219 (304)
                      +|+|+.+|+.+.+.+.+.+...++++|+.||.||.   +.++|||||.++||||+.+...|++|||+++.+.++..  .+
T Consensus       714 NGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~yt  790 (996)
T KOG0196|consen  714 NGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT  790 (996)
T ss_pred             CCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCcccc
Confidence            99999999999889999999999999999999994   45899999999999999999999999999998866553  33


Q ss_pred             cccc-------------Ccccc--ccccc-------------CCCCc-------ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          220 NCEK-------------TSEMA--EDIND-------------FVGGQ-------ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       220 ~~~~-------------~~~~s--~DV~S-------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      +.|.             .+.++  +||||             +|-++       +.++...   +-..|++|+..|.+||
T Consensus       791 t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy---RLPpPmDCP~aL~qLM  867 (996)
T KOG0196|consen  791 TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY---RLPPPMDCPAALYQLM  867 (996)
T ss_pred             ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc---CCCCCCCCcHHHHHHH
Confidence            3333             44444  99999             22222       3344555   6678899999999999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhccc
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSV  300 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~~  300 (304)
                      +.||+     +|..+||++.||+.+|+++.+.+++.
T Consensus       868 ldCWq-----kdR~~RP~F~qiV~~lDklIrnP~SL  898 (996)
T KOG0196|consen  868 LDCWQ-----KDRNRRPKFAQIVSTLDKLIRNPNSL  898 (996)
T ss_pred             HHHHH-----HHhhcCCCHHHHHHHHHHHhcCchhh
Confidence            99999     99999999999999999999877654

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-36  Score=269.98  Aligned_cols=220  Identities=20%  Similarity=0.232  Sum_probs=169.7

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC-CC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG-LQ  131 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~-~~  131 (304)
                      ....|+.+++||+|.||.||+|++.   ..|+.||+|++..+...+    ...+|+. |++++||||+++.+...+. ..
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~---~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~  191 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDL---ETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG  191 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeec---ccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence            3567899999999999999999986   468999999999877554    3445555 9999999999999998877 45


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|||+|||++ +|..++...+-.+++.++..|+.|++.||+|+   |.+||+|||||.+|||||.+|.+||+|||||++
T Consensus       192 siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~c---H~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~  267 (560)
T KOG0600|consen  192 SIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYC---HSRGVLHRDIKGSNILIDNNGVLKIADFGLARF  267 (560)
T ss_pred             eEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHH---hhcCeeeccccccceEEcCCCCEEeccccceee
Confidence            67999999999 99999887666899999999999999999999   555999999999999999999999999999998


Q ss_pred             cCCCCC---Cccccc-----------Ccccc--ccccc--------------CCCCc-----------------ceec-c
Q 046594          212 CSGGSN---RRNCEK-----------TSEMA--EDIND--------------FVGGQ-----------------ECLD-Q  243 (304)
Q Consensus       212 ~~~~~~---~~~~~~-----------~~~~s--~DV~S--------------~~~~~-----------------~~~~-~  243 (304)
                      +.....   +....+           ...|+  .|+||              +++..                 +... .
T Consensus       268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~  347 (560)
T KOG0600|consen  268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS  347 (560)
T ss_pred             ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence            866553   222222           22222  99999              11111                 0000 0


Q ss_pred             cc-----CCCCCCcc-------hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          244 RL-----YIPNEKFK-------ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       244 ~~-----~~~~~~~~-------~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+     ..+...+.       ...+....+|+..+|.     .||.+|.|+.+++++
T Consensus       348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~-----ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLS-----LDPDKRGTASSALQS  400 (560)
T ss_pred             cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhc-----cCccccccHHHHhcC
Confidence            00     00011111       1224667899999999     999999999999863

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=4.5e-36  Score=269.68  Aligned_cols=229  Identities=23%  Similarity=0.256  Sum_probs=171.1

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      .++|++.+.||+|+||.||++.+.+.  ...+..||||++.......   .+..|+. ++.+ +||||+++++++...+.
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            46899999999999999999976432  1345789999997543322   5666777 8888 89999999999887766


Q ss_pred             ceEEEEeecCCCChhhHhhhcC----------------------------------------------------------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG----------------------------------------------------------  153 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------  153 (304)
                      .++++|||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            6799999999999999987531                                                          


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---Ccc-cc---c
Q 046594          154 ---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---RRN-CE---K  223 (304)
Q Consensus       154 ---~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---~~~-~~---~  223 (304)
                         .++++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++.......   ... .+   +
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence               147788899999999999999965   4899999999999999999999999999986533221   100 00   1


Q ss_pred             -------Ccccc--ccccc--------CCCCc---------ceeccccC-CCCCCcchHHHHHHHHHHHHhccccCCCCC
Q 046594          224 -------TSEMA--EDIND--------FVGGQ---------ECLDQRLY-IPNEKFKITSLAKLGDIEKWCISCCSNIEG  276 (304)
Q Consensus       224 -------~~~~s--~DV~S--------~~~~~---------~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~~~~~d  276 (304)
                             ...++  +||||        ...+.         +.+...+. ......+...+..+.+++.+||+     .|
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~-----~d  317 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQ-----GD  317 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcc-----CC
Confidence                   22233  89999        10011         00000000 00122344566789999999999     99


Q ss_pred             CCCCCCHHHHHHHHHHHHh
Q 046594          277 NENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       277 p~~Rps~~~vl~~L~~~~~  295 (304)
                      |++|||+.++++.|+.+..
T Consensus       318 p~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         318 PKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3e-36  Score=259.27  Aligned_cols=210  Identities=20%  Similarity=0.169  Sum_probs=170.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ...|++++.||+|+||.||.++.+   ..++.+|+|+++....-+     ....|.. |.+++||+||+++-.|++. ..
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~---dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~-~k   99 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKK---DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE-EK   99 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEc---ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC-Ce
Confidence            357999999999999999999987   457999999998654322     5566777 9999999999999999988 66


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+|+||+.||.|..+|.+.+ .+++..+..|+.+|+.||.|||+.   |||||||||+|||+|.+|+++|+|||+++..
T Consensus       100 LylVld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~  175 (357)
T KOG0598|consen  100 LYLVLDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED  175 (357)
T ss_pred             EEEEEeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence            699999999999999999887 899999999999999999999554   8999999999999999999999999999966


Q ss_pred             CCCCC--CcccccCcccc------------ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEKTSEMA------------EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~~~~~s------------~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  .+.+|+..|++            +|.||              |....  ++.+..+.......+.-.+.+.++
T Consensus       176 ~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ard  255 (357)
T KOG0598|consen  176 LKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARD  255 (357)
T ss_pred             ccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHH
Confidence            55433  55688855555            89999              22222  333333311112334447788999


Q ss_pred             HHHHhccccCCCCCCCCCC
Q 046594          263 IEKWCISCCSNIEGNENHP  281 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rp  281 (304)
                      ++.+.|.     .||++|-
T Consensus       256 ll~~LL~-----rdp~~RL  269 (357)
T KOG0598|consen  256 LLKKLLK-----RDPRQRL  269 (357)
T ss_pred             HHHHHhc-----cCHHHhc
Confidence            9999999     9999995

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-35  Score=271.17  Aligned_cols=216  Identities=20%  Similarity=0.232  Sum_probs=180.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      +-|++.+.||.|+.|.|-+|.+..   .|+.+|||++.......     .++.|+. |+.+.|||++++++++.+. .++
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~---TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~-~~l   87 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAE---TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK-QHL   87 (786)
T ss_pred             cceeccccccCCCCceehhhhccc---ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC-ceE
Confidence            458999999999999999999874   58999999998763221     6777787 8899999999999999988 556


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+|.||+++|.|++++-..+ ++++.++.++++||+.|+.|+|..   +|+||||||+|+|+|.++++||+|||+|..-.
T Consensus        88 ylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~  163 (786)
T KOG0588|consen   88 YLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV  163 (786)
T ss_pred             EEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc
Confidence            99999999999999999988 899999999999999999999876   69999999999999999999999999999887


Q ss_pred             CCCC-CcccccCcc----------cc---ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHH
Q 046594          214 GGSN-RRNCEKTSE----------MA---EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       214 ~~~~-~~~~~~~~~----------~s---~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ++.. .+.||.+.|          |.   +||||              |..+.  .++.+- ....-+.|...+.++.+|
T Consensus       164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV-~~G~f~MPs~Is~eaQdL  242 (786)
T KOG0588|consen  164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKV-QRGVFEMPSNISSEAQDL  242 (786)
T ss_pred             CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHH-HcCcccCCCcCCHHHHHH
Confidence            7776 667776222          22   99999              44333  111111 111235677888999999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+|+.     .||++|.|+.||++|
T Consensus       243 Lr~ml~-----VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  243 LRRMLD-----VDPSTRITTEEILKH  263 (786)
T ss_pred             HHHHhc-----cCccccccHHHHhhC
Confidence            999999     999999999999987

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-35  Score=264.74  Aligned_cols=222  Identities=19%  Similarity=0.208  Sum_probs=175.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccc----cc---hhHHHHHHH-hhCCC-CCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYM----AS---QTKLEEEIL-LKSSS-HLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~----~~---~~~~~~e~~-l~~l~-h~niv~~~~~~~~~  129 (304)
                      .++|++.+.||+|.||.|+.+.+..   .+..||+|.+...    ..   ...+.+|+. ++.++ ||||+++++++...
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~---t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~   92 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRL---TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP   92 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeecc---CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence            5689999999999999999998863   4699999987664    22   225666777 99998 99999999999988


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-CCeeEccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-CNAKLAGFGA  208 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfgl  208 (304)
                      .. +++||||+.+|+|.+++...+ ++.+..+..++.|++.|++|||.   .||+||||||+|+|++.+ +++||+|||+
T Consensus        93 ~~-~~ivmEy~~gGdL~~~i~~~g-~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~  167 (370)
T KOG0583|consen   93 TK-IYIVMEYCSGGDLFDYIVNKG-RLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGL  167 (370)
T ss_pred             Ce-EEEEEEecCCccHHHHHHHcC-CCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecccc
Confidence            55 699999999999999999944 89999999999999999999955   489999999999999999 9999999999


Q ss_pred             ccccC-CCCC-Cccccc-----------Ccccc---ccccc--------------CCCCc-ceeccccCCCCCCcchHH-
Q 046594          209 ANYCS-GGSN-RRNCEK-----------TSEMA---EDIND--------------FVGGQ-ECLDQRLYIPNEKFKITS-  256 (304)
Q Consensus       209 a~~~~-~~~~-~~~~~~-----------~~~~s---~DV~S--------------~~~~~-~~~~~~~~~~~~~~~~~~-  256 (304)
                      +.... .... .+.+|+           .+.++   +||||              |.... ..+-..+....-.+|... 
T Consensus       168 s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~  247 (370)
T KOG0583|consen  168 SAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL  247 (370)
T ss_pred             ccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC
Confidence            99883 3333 556666           22133   99999              22211 000011111123455666 


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      +..+.+++.+|+.     .||.+|+|+.+++ .-..++
T Consensus       248 S~~~~~Li~~mL~-----~~P~~R~t~~~i~-~h~w~~  279 (370)
T KOG0583|consen  248 SPEARSLIEKMLV-----PDPSTRITLLEIL-EHPWFQ  279 (370)
T ss_pred             CHHHHHHHHHHcC-----CCcccCCCHHHHh-hChhhc
Confidence            8999999999999     9999999999999 444444

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-35  Score=266.16  Aligned_cols=216  Identities=24%  Similarity=0.243  Sum_probs=176.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+|....++|+|+.|.||.+...+   .++.||||.+.......  .+.+|+. |+..+|+|||.+++.|... +.+|+
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~---~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-deLWV  347 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKIS---TKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-DELWV  347 (550)
T ss_pred             hhhhcchhhhccccccceeeeeecc---CCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-ceeEE
Confidence            4568888999999999999998875   46889999998755443  5556666 9999999999999999888 55599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||||+||+|.+.+....  +++.+...+++++++||+|||   .+||+|||||.+|||++.+|.+||+|||++..+...
T Consensus       348 VMEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~  422 (550)
T KOG0578|consen  348 VMEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE  422 (550)
T ss_pred             EEeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence            999999999999998874  999999999999999999995   558999999999999999999999999999998776


Q ss_pred             CC--CcccccCcccc------------ccccc-------CCCCc------------ceeccccCCCCCCcchHHHHHHHH
Q 046594          216 SN--RRNCEKTSEMA------------EDIND-------FVGGQ------------ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       216 ~~--~~~~~~~~~~s------------~DV~S-------~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ..  .+..|+++.|+            .||||       +-.++            ..+..+- .++-..+...+..+.+
T Consensus       423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng-~P~lk~~~klS~~~kd  501 (550)
T KOG0578|consen  423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPKLKNPEKLSPELKD  501 (550)
T ss_pred             cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcC-CCCcCCccccCHHHHH
Confidence            64  44555544443            89999       11111            1111111 1134566778899999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||+     .|+++||++.++|+|
T Consensus       502 FL~~cL~-----~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  502 FLDRCLV-----VDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHhh-----cchhcCCCHHHHhcC
Confidence            9999999     999999999999985

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.9e-35  Score=249.63  Aligned_cols=216  Identities=18%  Similarity=0.164  Sum_probs=171.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHHhhCCCCCcccceeeeeeCCC-Cc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEILLKSSSHLNIVTLLGYPQDGL-QR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~niv~~~~~~~~~~-~~  132 (304)
                      ...|+.+++|++|.||.||+++++.   +++.||+|+++.+....     .++|...|.+.+|||||.+-++....+ +.
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~---t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~  151 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKK---TDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDK  151 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCC---cceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence            4679999999999999999999984   56999999999776554     444444499999999999999876542 34


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+|||||++ +|..++...+.++...++..++.|+++|++|||..   .|+||||||+|+|++..|.+||+|||+|+.+
T Consensus       152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y  227 (419)
T KOG0663|consen  152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY  227 (419)
T ss_pred             eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence            7999999999 99999999888999999999999999999999765   6999999999999999999999999999999


Q ss_pred             CCCCC--Cccccc-----------Ccccc--ccccc--------------CCCCc------------------------c
Q 046594          213 SGGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ------------------------E  239 (304)
Q Consensus       213 ~~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~------------------------~  239 (304)
                      +....  +....+           ...++  .|+||              |++..                        +
T Consensus       228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~  307 (419)
T KOG0663|consen  228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE  307 (419)
T ss_pred             cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence            87754  222222           33333  89999              21111                        0


Q ss_pred             e-----------eccccCCCCCCcchH-HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          240 C-----------LDQRLYIPNEKFKIT-SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       240 ~-----------~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .           ...++   +..|+.. .+..-.+|+...|.     .||.+|.|+.|.++|
T Consensus       308 lp~~k~~~f~~~pyn~l---r~kF~~~~lse~g~~Lln~llt-----~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  308 LPAVKKMTFSEHPYNNL---RKKFGALSLSEQGFDLLNKLLT-----YDPGKRITAEDGLKH  361 (419)
T ss_pred             cchhhccccCCCCchhh---hhhccccccchhHHHHHHHHhc-----cCccccccHHHhhcc
Confidence            0           00111   2222222 34778899999999     999999999999875

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.4e-35  Score=257.22  Aligned_cols=217  Identities=21%  Similarity=0.290  Sum_probs=178.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..||++.+.||+|.||.|-++..+   ..|+.||||.++.....+     .+++|+. |+.++||||+.++++|.+. ..
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~---~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk-dK  127 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEH---KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK-DK  127 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhc---cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC-ce
Confidence            568999999999999999999876   458999999998765443     7788888 9999999999999999988 55


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +.|||||..+|.|++++.+.+ .+++..+..+++||..|+.|+|.   .+++|||||.+|||+|.|+++||+|||++..+
T Consensus       128 IvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly  203 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLY  203 (668)
T ss_pred             EEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhh
Confidence            599999999999999999988 89999999999999999999955   48999999999999999999999999999988


Q ss_pred             CCCCC-Cccccc----------Ccccc---ccccc--------------CCCCc-ceeccccCCCCCCc-chHHHHHHHH
Q 046594          213 SGGSN-RRNCEK----------TSEMA---EDIND--------------FVGGQ-ECLDQRLYIPNEKF-KITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~-~~~~~~----------~~~~s---~DV~S--------------~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~  262 (304)
                      ....- .+.||.          +..|.   .|-||              |.+.. ..+-+++.  ++.+ .+..+....-
T Consensus       204 ~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs--~GaYrEP~~PSdA~g  281 (668)
T KOG0611|consen  204 ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQIS--RGAYREPETPSDASG  281 (668)
T ss_pred             ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhh--cccccCCCCCchHHH
Confidence            76655 445555          22222   89999              33332 22222221  2332 3445567788


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      ||.+||.     .||++|.|+.||..|.
T Consensus       282 LIRwmLm-----VNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  282 LIRWMLM-----VNPERRATIEDIASHW  304 (668)
T ss_pred             HHHHHHh-----cCcccchhHHHHhhhh
Confidence            9999999     9999999999999875

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.6e-34  Score=248.83  Aligned_cols=223  Identities=18%  Similarity=0.177  Sum_probs=172.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++.....+..+|+|..+......   .+.+|+. +++++||||+++++++..++ .++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~   82 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN-TMM   82 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC-CcE
Confidence            357899999999999999998765433456899999998654332   6667777 99999999999999998774 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.++++|||.+.....
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence            99999999999999987655799999999999999999999654   899999999999999999999999998765432


Q ss_pred             CCC-C--ccc---cc-------Ccccc--ccccc--------CCCCc---------c---eeccccCCCCCCcchHHHHH
Q 046594          215 GSN-R--RNC---EK-------TSEMA--EDIND--------FVGGQ---------E---CLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       215 ~~~-~--~~~---~~-------~~~~s--~DV~S--------~~~~~---------~---~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ... .  ...   ..       ...++  +||||        ...+.         +   .+....   ....+..++..
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  236 (266)
T cd05064         160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF---RLPAPRNCPNL  236 (266)
T ss_pred             cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC---CCCCCCCCCHH
Confidence            211 0  000   00       22223  89999        11111         0   011111   22345566788


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      +.+++.+||+     .+|++||++.++++.|+++
T Consensus       237 ~~~li~~c~~-----~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         237 LHQLMLDCWQ-----KERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHHcC-----CCchhCCCHHHHHHHHHhh
Confidence            9999999999     9999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-34  Score=253.37  Aligned_cols=219  Identities=19%  Similarity=0.156  Sum_probs=171.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+.|++.+.||.|..+.||+|++.-   .++.||||++..+....   .++.|+. ++.++||||++++..|..+ ..+|
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p---~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~-~~LW  100 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIP---TNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD-SELW  100 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecc---cCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec-ceeE
Confidence            3579999999999999999999974   45999999998776554   7888888 9999999999999999988 5569


Q ss_pred             EEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +||.||.+||+.+++...-. .+++..+..|.+++++||.|||+.   |.||||||+.||||+.+|.+||+|||.+..+.
T Consensus       101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~  177 (516)
T KOG0582|consen  101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF  177 (516)
T ss_pred             EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence            99999999999999987644 799999999999999999999654   99999999999999999999999999876554


Q ss_pred             CCCC----C--ccccc-------------Ccc-cccccccCCCCc----------------ceeccccC---------CC
Q 046594          214 GGSN----R--RNCEK-------------TSE-MAEDINDFVGGQ----------------ECLDQRLY---------IP  248 (304)
Q Consensus       214 ~~~~----~--~~~~~-------------~~~-~s~DV~S~~~~~----------------~~~~~~~~---------~~  248 (304)
                      ....    .  ...++             .|| +.+|||||+-..                +++-..+.         ..
T Consensus       178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~  257 (516)
T KOG0582|consen  178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGL  257 (516)
T ss_pred             ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccC
Confidence            3322    1  11222             222 229999922111                11111110         00


Q ss_pred             CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          249 NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       249 ~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+........+.+++..||+     +||.+|||+++++++
T Consensus       258 ~~d~~k~~~ksf~e~i~~CL~-----kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  258 DKDEDKKFSKSFREMIALCLV-----KDPSKRPTASKLLKH  293 (516)
T ss_pred             ChHHhhhhcHHHHHHHHHHhh-----cCcccCCCHHHHhcc
Confidence            111223345689999999999     999999999999975

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-35  Score=283.06  Aligned_cols=226  Identities=23%  Similarity=0.237  Sum_probs=181.7

Q ss_pred             hccccccCCccccceeeecceeecCC--CcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRN--LTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~--~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      -+..+.||+|+||.||.+.+.+...+  -..||+|.+.......   +|.+|.. |++++|||||+++|+|.+.... +|
T Consensus       694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~-~i  772 (1025)
T KOG1095|consen  694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP-LI  772 (1025)
T ss_pred             eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc-EE
Confidence            34567899999999999998765432  3459999998765443   7777777 9999999999999999997566 99


Q ss_pred             EEeecCCCChhhHhhhc------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          136 VFEFMQRGSLRWNLREK------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ++|||++|+|..+|++.      ...+...+.+.++.|||+|++||++.   .+|||||..+|+||+....+||+|||+|
T Consensus       773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlA  849 (1025)
T KOG1095|consen  773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLA  849 (1025)
T ss_pred             EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchh
Confidence            99999999999999987      44789999999999999999999655   6999999999999999999999999999


Q ss_pred             cccCCCCCCc--cccc------------Ccccc--ccccc---------------CCCCc--ceeccccCCCCCCcchHH
Q 046594          210 NYCSGGSNRR--NCEK------------TSEMA--EDIND---------------FVGGQ--ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       210 ~~~~~~~~~~--~~~~------------~~~~s--~DV~S---------------~~~~~--~~~~~~~~~~~~~~~~~~  256 (304)
                      +.+.....+.  ..+.            .+.++  +||||               ++.-.  +++..-+...+-+.|..|
T Consensus       850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~C  929 (1025)
T KOG1095|consen  850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYC  929 (1025)
T ss_pred             HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCC
Confidence            9654444311  1111            56666  99999               11111  333322222245778899


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      +..+.++|.+||+     .+|++||++..+++.++.+.+.
T Consensus       930 P~~ly~lM~~CW~-----~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  930 PEKLYQLMLQCWK-----HDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             ChHHHHHHHHHcc-----CChhhCccHHHHHhhhhhhhhh
Confidence            9999999999999     9999999999999999887663

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-35  Score=262.08  Aligned_cols=213  Identities=18%  Similarity=0.153  Sum_probs=171.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ...|...+.+|+|+|++|++|+.+.   .++.+|||++.....-.     -...|.. |.+| .||.|++|+--|.+. .
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~---t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~-~  147 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKA---TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE-E  147 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecC---CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc-c
Confidence            3457888999999999999999985   46999999987543222     3344455 7777 899999999999988 5


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+|+||+++|+|.++|++.+ .+++..+..++.||+.||+|||.   .|||||||||+|||+|.|++++|+|||.|+.
T Consensus       148 sLYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~  223 (604)
T KOG0592|consen  148 SLYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKI  223 (604)
T ss_pred             ceEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeecccccc
Confidence            5699999999999999999997 89999999999999999999955   4999999999999999999999999999997


Q ss_pred             cCCCCC---------------CcccccCcccc------------ccccc--------------CCCCc------ceeccc
Q 046594          212 CSGGSN---------------RRNCEKTSEMA------------EDIND--------------FVGGQ------ECLDQR  244 (304)
Q Consensus       212 ~~~~~~---------------~~~~~~~~~~s------------~DV~S--------------~~~~~------~~~~~~  244 (304)
                      +.+...               ....|+..|++            +|+|+              |....      .+++-.
T Consensus       224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~  303 (604)
T KOG0592|consen  224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD  303 (604)
T ss_pred             CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc
Confidence            754221               11334422222            99999              22211      333333


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 LYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 ~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                           -++|+..++.+.+|+.+.|.     .||.+|+|..+|.+|
T Consensus       304 -----y~fp~~fp~~a~dLv~KLLv-----~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  304 -----YEFPEGFPEDARDLIKKLLV-----RDPSDRLTSQQIKAH  338 (604)
T ss_pred             -----ccCCCCCCHHHHHHHHHHHc-----cCccccccHHHHhhC
Confidence                 35677777999999999999     999999999999876

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-34  Score=262.54  Aligned_cols=222  Identities=18%  Similarity=0.216  Sum_probs=174.6

Q ss_pred             ccccCCccccceeeecceeecC-CCcEEEEEEecccc--chh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMA--SQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~--~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .++||+|+||.||++..+.... ....||||..+...  ..+   ++..|.. +++++|||||+++|++....+. ++||
T Consensus       162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl-~ivm  240 (474)
T KOG0194|consen  162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL-MLVM  240 (474)
T ss_pred             cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc-EEEE
Confidence            4799999999999998865322 11238999998522  122   6777777 9999999999999999988555 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      |+|+||+|.++|...++.++..+...++.+.+.||+|||.   ++++||||-.+|+|++.++.+||+|||+++.-.....
T Consensus       241 El~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~  317 (474)
T KOG0194|consen  241 ELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM  317 (474)
T ss_pred             EecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence            9999999999999988779999999999999999999955   4899999999999999999999999999887642111


Q ss_pred             -C-----------cccccCcccc--ccccc--------CCCCc-------------ceeccccCCCCCCcchHHHHHHHH
Q 046594          218 -R-----------RNCEKTSEMA--EDIND--------FVGGQ-------------ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       218 -~-----------~~~~~~~~~s--~DV~S--------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                       .           +.....+.++  +||||        |..+.             .+.....   +-..+...+..+..
T Consensus       318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~---r~~~~~~~p~~~~~  394 (474)
T KOG0194|consen  318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY---RMPIPSKTPKELAK  394 (474)
T ss_pred             ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc---cCCCCCCCHHHHHH
Confidence             1           1111145565  99999        22211             2212233   34556677888999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ++.+||.     .||++||||.++.+.|+.+.....
T Consensus       395 ~~~~c~~-----~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  395 VMKQCWK-----KDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             HHHHhcc-----CChhhccCHHHHHHHHHHHHhccc
Confidence            9999999     999999999999999998876544

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3.5e-34  Score=253.70  Aligned_cols=224  Identities=20%  Similarity=0.210  Sum_probs=166.2

Q ss_pred             HHhhccccccCCccccceeeecceee-------------cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV-------------SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVT  121 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~-------------~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~  121 (304)
                      ..+|++.+.||+|+||.||++.+...             ...+..||+|.+.......   .+.+|+. +++++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            46899999999999999999875321             1134579999987654332   6777777 99999999999


Q ss_pred             eeeeeeCCCCceEEEEeecCCCChhhHhhhcC------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046594          122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKG------------------GPLDWEKRLAIALQIDSANQMVCMYSKPPI  183 (304)
Q Consensus       122 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i  183 (304)
                      +++++.+.+. .+++|||+++|+|.+++....                  ..+++...+.++.|++.||+|||+.   ++
T Consensus        84 ~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i  159 (304)
T cd05096          84 LLGVCVDEDP-LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF  159 (304)
T ss_pred             EEEEEecCCc-eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence            9999988755 499999999999999886532                  1467889999999999999999764   89


Q ss_pred             eecCCCCCCeeeCCCCCeeEcccccccccCCCCC---Cc-cccc----------Ccccc--cccccCC------------
Q 046594          184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---RR-NCEK----------TSEMA--EDINDFV------------  235 (304)
Q Consensus       184 vH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---~~-~~~~----------~~~~s--~DV~S~~------------  235 (304)
                      +||||||+|||++.++.+||+|||+++.......   .. ..++          .+.++  +||||++            
T Consensus       160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~  239 (304)
T cd05096         160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE  239 (304)
T ss_pred             cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence            9999999999999999999999999986543221   00 0000          22233  8999911            


Q ss_pred             -CCc-----cee-------ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          236 -GGQ-----ECL-------DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       236 -~~~-----~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                       +..     +.+       ...........+..++..+.+++.+||+     .||.+|||+.+|.+.|+
T Consensus       240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~-----~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         240 QPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWS-----RDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHcc-----CCchhCcCHHHHHHHHh
Confidence             000     000       0000000112234566789999999999     99999999999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-35  Score=240.11  Aligned_cols=219  Identities=20%  Similarity=0.243  Sum_probs=178.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +..|.+.+.||+|.||.||.++++   +++-.||+|++.......     ++++|+. .+.++||||.+++++|.+....
T Consensus        21 l~dfeigr~LgkgkFG~vYlarek---ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri   97 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREK---KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI   97 (281)
T ss_pred             hhhccccccccCCccccEeEeeec---cCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence            568999999999999999999998   457899999997654332     8888888 9999999999999999998555


Q ss_pred             eEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                       ||++||.++|+|...|..... .+++.....++.|+|.||.|+   |.++++||||||+|+|++.++.+||+|||-+..
T Consensus        98 -yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~---h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~  173 (281)
T KOG0580|consen   98 -YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYC---HLKRVIHRDIKPENLLLGSAGELKIADFGWSVH  173 (281)
T ss_pred             -EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHh---ccCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence             999999999999999985443 799999999999999999999   556899999999999999999999999999887


Q ss_pred             cCCCCCCccccc------------Cccccccccc-----------CCCCcc----eeccccCCCCCCcchHHHHHHHHHH
Q 046594          212 CSGGSNRRNCEK------------TSEMAEDIND-----------FVGGQE----CLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       212 ~~~~~~~~~~~~------------~~~~s~DV~S-----------~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .......+.+|+            ......|+|+           .++.+.    -.-.++...+-.+|...+..+.++|
T Consensus       174 ~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI  253 (281)
T KOG0580|consen  174 APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLI  253 (281)
T ss_pred             cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHH
Confidence            765444556666            1111299999           222221    1111111123456677889999999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+|+.     .+|.+|.+..|+++|
T Consensus       254 ~~ll~-----~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  254 SRLLV-----KNPIERLALTEVMDH  273 (281)
T ss_pred             HHHhc-----cCccccccHHHHhhh
Confidence            99999     999999999999986

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3.8e-34  Score=260.85  Aligned_cols=223  Identities=24%  Similarity=0.237  Sum_probs=167.3

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.+.  ...+..||||+++......   .+.+|+. ++.+ +||||+++++++...+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            45799999999999999999875432  2245689999987543222   5666777 8888 89999999999988865


Q ss_pred             ceEEEEeecCCCChhhHhhhcC----------------------------------------------------------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG----------------------------------------------------------  153 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------  153 (304)
                      . ++||||+++|+|.+++....                                                          
T Consensus       114 ~-~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         114 T-LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             c-eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence            5 99999999999999886532                                                          


Q ss_pred             ----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          154 ----------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       154 ----------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                                      ..+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++.......
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  269 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN  269 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence                            1478889999999999999999754   899999999999999999999999999986643322


Q ss_pred             ---Cc-ccc---c-------Ccccc--ccccc--------CCCCc-------------ceeccccCCCCCCcchHHHHHH
Q 046594          218 ---RR-NCE---K-------TSEMA--EDIND--------FVGGQ-------------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       218 ---~~-~~~---~-------~~~~s--~DV~S--------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                         .. ..+   +       ...++  +||||        ...+.             ..+....   ....+...+.++
T Consensus       270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l  346 (375)
T cd05104         270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY---RMLSPECAPSEM  346 (375)
T ss_pred             ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCc---cCCCCCCCCHHH
Confidence               00 000   0       12223  99999        11011             1111111   112233345789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+++.+||+     .||++|||+.++++.|++.
T Consensus       347 ~~li~~cl~-----~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         347 YDIMKSCWD-----ADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHHHHHcc-----CChhHCcCHHHHHHHHHhh
Confidence            999999999     9999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-34  Score=258.92  Aligned_cols=216  Identities=19%  Similarity=0.229  Sum_probs=179.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      +.+|..++.+|+|+||.+++.+++.   +...+++|.+......+    .-..|+. +++++|||||.+.+.|..++..+
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~---~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l   79 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKS---DDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLL   79 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhcc---CCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceE
Confidence            4689999999999999999999874   56899999998655333    3345555 99999999999999999997767


Q ss_pred             EEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|||+||+||+|.+.+.+..+ .++++.++.|+.|++.|++|||+.   .|+|||||+.|||++.++.++|+|||+|+.+
T Consensus        80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l  156 (426)
T KOG0589|consen   80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKIL  156 (426)
T ss_pred             EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhc
Confidence            999999999999999988764 899999999999999999999754   6999999999999999999999999999999


Q ss_pred             CCCCC--CcccccCcccc------------ccccc--------------CCCCc------ceeccccCCCCCCcchHHHH
Q 046594          213 SGGSN--RRNCEKTSEMA------------EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       213 ~~~~~--~~~~~~~~~~s------------~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~  258 (304)
                      .....  .+..|++.++.            +||||              |...+      .++...+    ...|...+.
T Consensus       157 ~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~----~Plp~~ys~  232 (426)
T KOG0589|consen  157 NPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLY----SPLPSMYSS  232 (426)
T ss_pred             CCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccC----CCCCccccH
Confidence            87763  44445533332            99999              32222      2333332    556778889


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++..++..|+.     .+|..||++.+++.+
T Consensus       233 el~~lv~~~l~-----~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  233 ELRSLVKSMLR-----KNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHHHHHhh-----cCCccCCCHHHHhhC
Confidence            99999999999     999999999999975

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-34  Score=270.75  Aligned_cols=226  Identities=20%  Similarity=0.199  Sum_probs=180.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCC-CCcccceeee-eeC---C--
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSS-HLNIVTLLGY-PQD---G--  129 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~-h~niv~~~~~-~~~---~--  129 (304)
                      .+.++.+.|.+|||+.||+|.+..   .|..+|+|++-..+...  ...+|+. |++|+ |+|||.+++. ...   .  
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~---~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVK---GGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecC---CCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            467889999999999999999863   34899999998775554  7788888 99995 9999999993 221   1  


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      ..+++|.||||.||+|-++|..+-. .|.+.++++|+.|+++|+++||. .+++|||||||-+||||+.+|+.||||||.
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGS  192 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGS  192 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccc
Confidence            2346899999999999999986533 79999999999999999999998 477899999999999999999999999999


Q ss_pred             ccccCCCCC--------------Ccc-ccc---------Ccccc--ccccc--------------CCCC-c-ceeccccC
Q 046594          209 ANYCSGGSN--------------RRN-CEK---------TSEMA--EDIND--------------FVGG-Q-ECLDQRLY  246 (304)
Q Consensus       209 a~~~~~~~~--------------~~~-~~~---------~~~~s--~DV~S--------------~~~~-~-~~~~~~~~  246 (304)
                      |........              .++ ..+         +..+.  +|||+              |+.. . .|++.+. 
T Consensus       193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y-  271 (738)
T KOG1989|consen  193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNY-  271 (738)
T ss_pred             cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccc-
Confidence            865432221              111 111         33333  99999              4333 2 6777777 


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                        .-...+..+..+.+||..||+     .||++||++.+++.++..+++.+
T Consensus       272 --~~P~~p~ys~~l~~LI~~mL~-----~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  272 --SFPPFPNYSDRLKDLIRTMLQ-----PNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             --cCCCCccHHHHHHHHHHHHhc-----cCcccCCCHHHHHHHHHHHhcCC
Confidence              222336789999999999999     99999999999999999887744

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.2e-33  Score=242.72  Aligned_cols=223  Identities=20%  Similarity=0.172  Sum_probs=170.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHHhhCCCCCc-ccceeeeeeCCCC-
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEILLKSSSHLN-IVTLLGYPQDGLQ-  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~n-iv~~~~~~~~~~~-  131 (304)
                      +..|+.++++|+|.||+||+++.+   .+|+.||+|+++....++     .++|.-.++.++|+| |+++++++...+. 
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~---~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~   86 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSK---RTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNH   86 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEe---cCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccc
Confidence            457888999999999999999987   457999999999876643     455555599999999 9999999988753 


Q ss_pred             ----ceEEEEeecCCCChhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          132 ----RRCLVFEFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       132 ----~~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                          .+++|+||++. +|.+++...+   ..++...+..++.|+++||+|||++   +|+||||||.||||+++|.+||+
T Consensus        87 ~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKla  162 (323)
T KOG0594|consen   87 RGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLA  162 (323)
T ss_pred             cccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeee
Confidence                67999999977 9999998876   3588899999999999999999764   89999999999999999999999


Q ss_pred             ccccccccCCCCC--Cccccc-----------Ccccc--ccccc--------------CCCCc-----------------
Q 046594          205 GFGAANYCSGGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ-----------------  238 (304)
Q Consensus       205 Dfgla~~~~~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~-----------------  238 (304)
                      |||+|+...-+..  ....++           ...++  .||||              |++..                 
T Consensus       163 DFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e  242 (323)
T KOG0594|consen  163 DFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNE  242 (323)
T ss_pred             ccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCc
Confidence            9999997763333  333333           22344  89999              22222                 


Q ss_pred             -------ceeccccCCCCCCcchH-------HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHH
Q 046594          239 -------ECLDQRLYIPNEKFKIT-------SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQV  293 (304)
Q Consensus       239 -------~~~~~~~~~~~~~~~~~-------~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~  293 (304)
                             ...+-....+...-+..       ......+++.+|++     .+|.+|.|+..+++|  +..+
T Consensus       243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~-----y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQ-----YDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhc-----cCcccCcCHHHHhcChhhccc
Confidence                   11111111111110111       12478899999999     999999999999987  5544

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.9e-33  Score=252.68  Aligned_cols=229  Identities=23%  Similarity=0.258  Sum_probs=170.6

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      .+||++.+.||+|+||.||++...++  ...++.||+|+++......   .+..|+. +.++ +|+||++++++|...+.
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            46899999999999999999976543  2346799999987543332   4455666 8888 89999999999987767


Q ss_pred             ceEEEEeecCCCChhhHhhhcC----------------------------------------------------------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG----------------------------------------------------------  153 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------  153 (304)
                      .+++++||+++++|.+++....                                                          
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            7799999999999999886421                                                          


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---Ccc-cc---c-
Q 046594          154 --GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---RRN-CE---K-  223 (304)
Q Consensus       154 --~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---~~~-~~---~-  223 (304)
                        ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.++|+|||++..+.....   ... .+   + 
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~  242 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM  242 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence              1578999999999999999999654   899999999999999999999999999987633221   000 00   0 


Q ss_pred             ------Ccccc--ccccc--------CCCCc---------ceeccccC-CCCCCcchHHHHHHHHHHHHhccccCCCCCC
Q 046594          224 ------TSEMA--EDIND--------FVGGQ---------ECLDQRLY-IPNEKFKITSLAKLGDIEKWCISCCSNIEGN  277 (304)
Q Consensus       224 ------~~~~s--~DV~S--------~~~~~---------~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp  277 (304)
                            ...++  +||||        +..+.         +.+...+. ......+......+.+++.+||+     .+|
T Consensus       243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~-----~~p  317 (337)
T cd05054         243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWH-----NNP  317 (337)
T ss_pred             CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHcc-----CCh
Confidence                  11122  89999        11011         00000100 00122234456789999999999     999


Q ss_pred             CCCCCHHHHHHHHHHHHh
Q 046594          278 ENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       278 ~~Rps~~~vl~~L~~~~~  295 (304)
                      ++||++.+++++|+++.+
T Consensus       318 ~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         318 EDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999998865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.8e-33  Score=250.53  Aligned_cols=227  Identities=16%  Similarity=0.142  Sum_probs=173.0

Q ss_pred             HHhhccccccCCccccceeeecceeecC-CCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|+..+.||+|+||.||++.+..... ....||+|.++.....   ..+.+|+. ++.++||||++++|++... .. 
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~-   83 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV-   83 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc-
Confidence            3579999999999999999998653211 2345999998754332   26667777 9999999999999999875 44 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++++||+++|+|.+++......+++...+.++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEcccccccccc
Confidence            89999999999999998876578999999999999999999965   489999999999999999999999999998765


Q ss_pred             CCCC-Cc---cccc----------Ccccc--cccccCC--------CCc------------ceeccccCCCCCCcchHHH
Q 046594          214 GGSN-RR---NCEK----------TSEMA--EDINDFV--------GGQ------------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       214 ~~~~-~~---~~~~----------~~~~s--~DV~S~~--------~~~------------~~~~~~~~~~~~~~~~~~~  257 (304)
                      .... ..   ...+          ...++  +||||++        .+.            .+.....   ....+..+.
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  237 (316)
T cd05108         161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICT  237 (316)
T ss_pred             CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCC---CCCCCCCCC
Confidence            4332 11   1001          12222  8999911        011            1111111   122334556


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+.+++.+||.     .||++|||+.+++.+|..+...+.
T Consensus       238 ~~~~~li~~cl~-----~~p~~Rps~~~l~~~l~~~~~~~~  273 (316)
T cd05108         238 IDVYMIMVKCWM-----IDADSRPKFRELIIEFSKMARDPQ  273 (316)
T ss_pred             HHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHcCCc
Confidence            789999999999     999999999999999998877554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=9e-34  Score=258.25  Aligned_cols=224  Identities=22%  Similarity=0.239  Sum_probs=169.3

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.+.  ..++..||+|++......+   .+.+|+. ++.+ +|+||++++++|...+.
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            56899999999999999999876432  2345689999997654333   5667777 8888 89999999999988855


Q ss_pred             ceEEEEeecCCCChhhHhhhcC----------------------------------------------------------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG----------------------------------------------------------  153 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------  153 (304)
                      . ++||||+++|+|.++++...                                                          
T Consensus       117 ~-~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         117 V-LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             e-EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            4 99999999999999886421                                                          


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---Cc
Q 046594          154 -----------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---RR  219 (304)
Q Consensus       154 -----------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---~~  219 (304)
                                 .++++..++.++.|++.||+|||+   ++++||||||+|||++.++.++|+|||+++.......   ..
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~  272 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG  272 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence                       147888999999999999999965   4899999999999999999999999999986543322   10


Q ss_pred             c-cc---c-------Ccccc--ccccc--------CCCCc-------------ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          220 N-CE---K-------TSEMA--EDIND--------FVGGQ-------------ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       220 ~-~~---~-------~~~~s--~DV~S--------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      . .+   +       ...++  +||||        ...+.             .......   ....+...+..+.+++.
T Consensus       273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~  349 (374)
T cd05106         273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY---QMSRPDFAPPEIYSIMK  349 (374)
T ss_pred             CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc---CccCCCCCCHHHHHHHH
Confidence            0 00   1       12233  89999        11011             1111111   12223334678999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      +||+     .||.+|||+.++++.|+++.
T Consensus       350 ~cl~-----~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         350 MCWN-----LEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHcC-----CChhhCcCHHHHHHHHHHHh
Confidence            9999     99999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=3.3e-33  Score=242.58  Aligned_cols=225  Identities=16%  Similarity=0.156  Sum_probs=172.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++..+....+...+|+|..+......   .+..|+. +++++||||+++++++...+. .++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~i   82 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP-VMI   82 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc-eEE
Confidence            57899999999999999999876443345789999987654332   5666777 999999999999999887744 499


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      +|||+++++|.+++....+.+++..++.++.|++.||+|||+   .+++||||||+|||++.++.++|+|||++......
T Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~  159 (266)
T cd05033          83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS  159 (266)
T ss_pred             EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence            999999999999998766689999999999999999999965   48999999999999999999999999999877521


Q ss_pred             CC--Cc--ccc-----c-----Ccccc--ccccc--------C--C--CCc-----ceeccccCCCCCCcchHHHHHHHH
Q 046594          216 SN--RR--NCE-----K-----TSEMA--EDIND--------F--V--GGQ-----ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       216 ~~--~~--~~~-----~-----~~~~s--~DV~S--------~--~--~~~-----~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ..  ..  ...     .     ...++  +||||        .  .  +..     +..+..........+..++..+.+
T Consensus       160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  239 (266)
T cd05033         160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQ  239 (266)
T ss_pred             ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            11  10  000     0     12222  89999        1  1  010     111100000012334556788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ++.+||+     .+|++||++.+++++|+++
T Consensus       240 li~~cl~-----~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         240 LMLDCWQ-----KDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHcC-----CCcccCcCHHHHHHHHHhh
Confidence            9999999     9999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=2.7e-33  Score=245.81  Aligned_cols=214  Identities=21%  Similarity=0.227  Sum_probs=166.2

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeC--C-CCceEEE
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQD--G-LQRRCLV  136 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~--~-~~~~~lv  136 (304)
                      ..+|+|++|.||++.+     +|+.||||.++.....     ..+.+|+. +++++||||++++|++.+  . ...+++|
T Consensus        26 ~~i~~g~~~~v~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv  100 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-----NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLI  100 (283)
T ss_pred             eEEeeCCceEEEEEEE-----CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEE
Confidence            5789999999999876     4689999999764332     25667787 999999999999999876  2 2356899


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++|+|.+++.... .+++.....++.|++.||.|||..+  +++||||||+|||++.++.+||+|||+++......
T Consensus       101 ~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~  177 (283)
T PHA02988        101 LEYCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP  177 (283)
T ss_pred             EEeCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence            99999999999998765 7999999999999999999997532  68899999999999999999999999998654322


Q ss_pred             C--Cccccc---------Ccccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHHHHHHH
Q 046594          217 N--RRNCEK---------TSEMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       217 ~--~~~~~~---------~~~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .  ..+..+         ...++  +||||              |....  +    +.....   +...+..++..+.++
T Consensus       178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~l~~l  254 (283)
T PHA02988        178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNN---SLKLPLDCPLEIKCI  254 (283)
T ss_pred             ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC---CCCCCCcCcHHHHHH
Confidence            1  111111         12334  99999              21111  1    111112   233455678899999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +.+||+     .||++|||+.++++.|+.++.
T Consensus       255 i~~cl~-----~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        255 VEACTS-----HDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHHhc-----CCcccCcCHHHHHHHHHHHHh
Confidence            999999     999999999999999998864

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.8e-33  Score=250.99  Aligned_cols=149  Identities=17%  Similarity=0.175  Sum_probs=129.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++.   .+..+|+|.+.......   .+.+|+. +++++||||+++++++..++ .++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   79 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKP---SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EIS   79 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-EEE
Confidence            3679999999999999999998863   57899999987653322   6777887 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++.... .+++..+..++.|++.||.|||+.+  +|+||||||+|||++.++.++|+|||++.....
T Consensus        80 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  156 (331)
T cd06649          80 ICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (331)
T ss_pred             EEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence            9999999999999998765 7899999999999999999997643  699999999999999999999999999976643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.8e-33  Score=245.24  Aligned_cols=223  Identities=22%  Similarity=0.249  Sum_probs=169.6

Q ss_pred             Hhh-ccccccCCccccceeeecceee-cCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCC-Cc
Q 046594           60 KRR-RMLKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGL-QR  132 (304)
Q Consensus        60 ~~~-~~~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~  132 (304)
                      +|| +..+.||+|+||.||++.+... ..++..+|+|........   ..+.+|+. +++++||||+++++++...+ ..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG   82 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence            455 9999999999999998765432 246789999999765432   26667777 99999999999999886543 34


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ++++|||+++++|.+++...  .+++.++..++.|++.||+|||+.   +++||||||+|||++.++.++|+|||+++..
T Consensus        83 ~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  157 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV  157 (283)
T ss_pred             EEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence            68999999999999999765  599999999999999999999754   8999999999999999999999999999866


Q ss_pred             CCCCC-C-------ccc-------ccCcccc--ccccc-----------CCCCc-------cee----------------
Q 046594          213 SGGSN-R-------RNC-------EKTSEMA--EDIND-----------FVGGQ-------ECL----------------  241 (304)
Q Consensus       213 ~~~~~-~-------~~~-------~~~~~~s--~DV~S-----------~~~~~-------~~~----------------  241 (304)
                      ..... .       ...       ......+  +||||           ..+..       +..                
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05080         158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL  237 (283)
T ss_pred             CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence            43221 0       000       0012223  89999           11110       000                


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +...   ....+...+..+.+++.+||+     .||++|||+.++++.|+.+.+
T Consensus       238 ~~~~---~~~~~~~~~~~~~~li~~cl~-----~~p~~Rps~~~i~~~l~~~~~  283 (283)
T cd05080         238 ERGM---RLPCPKNCPQEVYILMKNCWE-----TEAKFRPTFRSLIPILKEMHH  283 (283)
T ss_pred             hcCC---CCCCCCCCCHHHHHHHHHHhc-----cChhhCCCHHHHHHHHHHhhC
Confidence            0011   112234456889999999999     999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=2.5e-33  Score=252.51  Aligned_cols=226  Identities=21%  Similarity=0.239  Sum_probs=169.5

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      .+||++.+.||+|+||.||++.+.+.  ...++.||||.++......   .+..|+. +.++ +||||+++++++...+.
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            46899999999999999999986543  2357899999997644332   4556666 8888 78999999999877666


Q ss_pred             ceEEEEeecCCCChhhHhhhcC----------------------------------------------------------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG----------------------------------------------------------  153 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------  153 (304)
                      .++++|||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            6799999999999999986532                                                          


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---Cc-cc
Q 046594          154 --------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---RR-NC  221 (304)
Q Consensus       154 --------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---~~-~~  221 (304)
                              ..+++..+..++.|++.||+|||+   .+++||||||+|||++.++++||+|||++........   .. ..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                    136788889999999999999965   4899999999999999999999999999976532211   00 00


Q ss_pred             c-----c-----Ccccc--cccccCC--------CCc----------ce---eccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          222 E-----K-----TSEMA--EDINDFV--------GGQ----------EC---LDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       222 ~-----~-----~~~~s--~DV~S~~--------~~~----------~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                      +     .     ...++  +||||+.        .+.          ..   +....   ....+...+..+.+++.+||
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~cl  319 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---RMRAPDYTTPEMYQTMLDCW  319 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC---CCCCCCCCCHHHHHHHHHHc
Confidence            0     0     12223  8999911        011          00   00111   11223334567899999999


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          269 SCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      .     .||++|||+.+++++|+.+.+
T Consensus       320 ~-----~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         320 H-----GEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             c-----CChhhCcCHHHHHHHHHHHHh
Confidence            9     999999999999999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-34  Score=258.13  Aligned_cols=219  Identities=20%  Similarity=0.216  Sum_probs=172.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ...+...||+|.||+||++.+.|      .||||+++......    .|+.|+. +++-+|.||+-+.|||-.. +. .|
T Consensus       393 ev~l~~rIGsGsFGtV~Rg~whG------dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-~~-AI  464 (678)
T KOG0193|consen  393 EVLLGERIGSGSFGTVYRGRWHG------DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-PL-AI  464 (678)
T ss_pred             Hhhccceeccccccceeeccccc------ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-ce-ee
Confidence            34567899999999999999974      68999998765443    8889998 9999999999999999887 45 89


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |+.+|+|-+|+.+++.....++..+...|+.|+++||.||   |.++|||||||..|||+.+++++||+|||++..-...
T Consensus       465 iTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YL---HAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w  541 (678)
T KOG0193|consen  465 ITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYL---HAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW  541 (678)
T ss_pred             eehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhh---hhhhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence            9999999999999998877899999999999999999999   5668999999999999999999999999998644221


Q ss_pred             CC----Cccccc-------------Ccccc--cccccCCCC------------cceec--------cccCCCCCCcchHH
Q 046594          216 SN----RRNCEK-------------TSEMA--EDINDFVGG------------QECLD--------QRLYIPNEKFKITS  256 (304)
Q Consensus       216 ~~----~~~~~~-------------~~~~s--~DV~S~~~~------------~~~~~--------~~~~~~~~~~~~~~  256 (304)
                      ..    ....+.             ...++  +|||||+.-            .+.-|        ..+.........++
T Consensus       542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~  621 (678)
T KOG0193|consen  542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNC  621 (678)
T ss_pred             ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccC
Confidence            11    111111             22333  999992221            11111        11100112334567


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ..++.+|+..||.     +++++||.+.+|+..|+.+..
T Consensus       622 pk~mk~Ll~~C~~-----~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  622 PKAMKRLLSDCWK-----FDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             HHHHHHHHHHHHh-----cCcccCccHHHHHHHHHHhhh
Confidence            8899999999999     999999999999998887766

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.7e-33  Score=243.34  Aligned_cols=226  Identities=22%  Similarity=0.241  Sum_probs=170.1

Q ss_pred             HhhccccccCCccccceeeecceee-cCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCC-CCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~~  134 (304)
                      .+|++.+.+|+|+||.||.+.+++. ..++..+|+|.+.......  .+..|+. +++++||||+++++++... ...++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4688999999999999999876432 2457899999987654433  6777888 9999999999999987543 34468


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +|+||+++|+|.+++......+++..++.++.|++.||+|||+.   |++||||||+||+++.+++++|+|||++.....
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence            99999999999999987655799999999999999999999654   899999999999999999999999999987643


Q ss_pred             CCC---Ccccc-------c-----Ccccc--ccccc--------CCC-------Ccce---eccccC-------------
Q 046594          215 GSN---RRNCE-------K-----TSEMA--EDIND--------FVG-------GQEC---LDQRLY-------------  246 (304)
Q Consensus       215 ~~~---~~~~~-------~-----~~~~s--~DV~S--------~~~-------~~~~---~~~~~~-------------  246 (304)
                      ...   ....+       .     ....+  +||||        +..       ....   +.....             
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05081         161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK  240 (284)
T ss_pred             CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh
Confidence            321   00000       0     12222  89999        110       0000   000000             


Q ss_pred             -CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          247 -IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       247 -~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                       ......+...+..+.+++.+||.     .+|++|||+.++++.|+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~-----~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         241 NNGRLPAPPGCPAEIYAIMKECWN-----NDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHcc-----CChhhCCCHHHHHHHHHhc
Confidence             00111233456789999999999     9999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-34  Score=251.65  Aligned_cols=221  Identities=21%  Similarity=0.255  Sum_probs=168.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----------------HHHHHHH-hhCCCCCcccc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----------------KLEEEIL-LKSSSHLNIVT  121 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----------------~~~~e~~-l~~l~h~niv~  121 (304)
                      +..|++.+.||+|.||.|-++++.   .+++.||||++.......                ..++|+. |+++.|||||+
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~---~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDE---VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeec---CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            457899999999999999999886   357999999987533211                4556777 99999999999


Q ss_pred             eeeeeeCCC-CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC
Q 046594          122 LLGYPQDGL-QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN  200 (304)
Q Consensus       122 ~~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~  200 (304)
                      |+++..+.. +.+|||+|||..|.+...-.... .+.+.+++.|++++..||+|||.   +|||||||||+|+||+++|+
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~-els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~  248 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP-ELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGT  248 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCCCCcc-cccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCc
Confidence            999987653 45799999999988864433222 39999999999999999999955   48999999999999999999


Q ss_pred             eeEcccccccccCCCCC-------CcccccC-------------cccc---ccccc--------------CCCCc-----
Q 046594          201 AKLAGFGAANYCSGGSN-------RRNCEKT-------------SEMA---EDIND--------------FVGGQ-----  238 (304)
Q Consensus       201 ~kl~Dfgla~~~~~~~~-------~~~~~~~-------------~~~s---~DV~S--------------~~~~~-----  238 (304)
                      +||+|||.+.....+..       ..+.|++             ..+.   -||||              |-.+.     
T Consensus       249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~  328 (576)
T KOG0585|consen  249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF  328 (576)
T ss_pred             EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence            99999999886632211       3344441             2222   79999              11111     


Q ss_pred             -ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          239 -ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       239 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                       .++...+.   -...++..+.+.+||+++|+     +||++|.+..+|..|.=-..
T Consensus       329 ~KIvn~pL~---fP~~pe~~e~~kDli~~lL~-----KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  329 DKIVNDPLE---FPENPEINEDLKDLIKRLLE-----KDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             HHHhcCccc---CCCcccccHHHHHHHHHHhh-----cChhheeehhhheecceecc
Confidence             44444441   11223567899999999999     99999999999988764433

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.4e-33  Score=252.05  Aligned_cols=210  Identities=15%  Similarity=0.172  Sum_probs=159.6

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEee
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~  139 (304)
                      +.||+|+||.||++.++   .+|+.+|+|++......     ..+..|.. ++.++||||+++++++...+ .+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~e~   76 (323)
T cd05571           1 KLLGKGTFGKVILVREK---ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD-RLCFVMEY   76 (323)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC-EEEEEEeC
Confidence            46899999999999876   45789999998754211     14556666 99999999999999998874 55999999


Q ss_pred             cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--
Q 046594          140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--  217 (304)
Q Consensus       140 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--  217 (304)
                      +++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......  
T Consensus        77 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~  152 (323)
T cd05571          77 ANGGELFFHLSRER-VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATM  152 (323)
T ss_pred             CCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcc
Confidence            99999999998765 799999999999999999999654   899999999999999999999999999875422211  


Q ss_pred             Cccccc----------Ccccc--cccccCC--------------CCc--ceeccccCCCCCCcchHHHHHHHHHHHHhcc
Q 046594          218 RRNCEK----------TSEMA--EDINDFV--------------GGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCIS  269 (304)
Q Consensus       218 ~~~~~~----------~~~~s--~DV~S~~--------------~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~  269 (304)
                      ....++          ...++  +||||++              ...  ....... .....++...+..+.+++.+||+
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~li~~~L~  231 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEEIRFPRTLSPEAKSLLAGLLK  231 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHcc
Confidence            111222          12223  9999911              111  1111000 01224455667889999999999


Q ss_pred             ccCCCCCCCCCC-----CHHHHHHH
Q 046594          270 CCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       270 ~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                           .||++||     ++.++++|
T Consensus       232 -----~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         232 -----KDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             -----CCHHHcCCCCCCCHHHHHcC
Confidence                 9999999     79999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.3e-33  Score=247.91  Aligned_cols=216  Identities=18%  Similarity=0.179  Sum_probs=164.7

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      |+..+.||+|+||.||++.+..   +++.+|+|.+......     ..+.+|+. +++++|+||+++++++.+.+ .+++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-~~~l   77 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-ALCL   77 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEec---CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC-eEEE
Confidence            6788999999999999998763   5789999998653321     14556777 99999999999999998875 4599


Q ss_pred             EEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||||+++|+|.+++..... .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.++|+|||++.....
T Consensus        78 v~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05631          78 VLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE  154 (285)
T ss_pred             EEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence            9999999999988765432 68999999999999999999965   4899999999999999999999999999987643


Q ss_pred             CCC-Cccccc----------Ccccc--ccccc--------------CCCCc-----ceeccccCCCCCCcchHHHHHHHH
Q 046594          215 GSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       215 ~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ... ....++          ...++  +||||              |....     +.++.........++...+..+.+
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (285)
T cd05631         155 GETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKS  234 (285)
T ss_pred             CCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHH
Confidence            322 111222          22223  89999              11111     111211111123455566788999


Q ss_pred             HHHHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      |+.+||+     .||.+||+     ++++++|
T Consensus       235 li~~~l~-----~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         235 ICRMLLT-----KNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             HHHHHhh-----cCHHHhcCCCCCCHHHHhcC
Confidence            9999999     99999997     8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-34  Score=256.35  Aligned_cols=223  Identities=22%  Similarity=0.226  Sum_probs=177.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+-.+.++||+|.||.|.+|.-.+    +..||||+++......   .|..|+. |.+++||||++++|+|..++.. +
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCeveg----~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi-c  611 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCEVEG----PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL-C  611 (807)
T ss_pred             hhheehhhhhcCcccceeEEEEecC----ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch-H
Confidence            3445678999999999999988643    5899999999876544   7888888 9999999999999999998555 9


Q ss_pred             EEEeecCCCChhhHhhhcCCC-CCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKGGP-LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~-l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +++|||++|+|.+++..+..+ +.-....+|+.||+.||+||.+.   +++||||.+.|+|++.++++||+|||+++-+-
T Consensus       612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly  688 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLY  688 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccc
Confidence            999999999999999888543 35567788999999999999554   89999999999999999999999999999776


Q ss_pred             CCCCCccccc--------------Ccccc--cccccCCC--------------Cc-----------ceeccccCCCCCCc
Q 046594          214 GGSNRRNCEK--------------TSEMA--EDINDFVG--------------GQ-----------ECLDQRLYIPNEKF  252 (304)
Q Consensus       214 ~~~~~~~~~~--------------~~~~s--~DV~S~~~--------------~~-----------~~~~~~~~~~~~~~  252 (304)
                      .+......|.              .+.++  +|||+|..              .+           ++++..-...-...
T Consensus       689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~  768 (807)
T KOG1094|consen  689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSR  768 (807)
T ss_pred             cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccC
Confidence            6555333332              55666  99999211              11           12221110001234


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      |.-|+..+.+++.+||.     .|..+|||++++..+|+...
T Consensus       769 P~~cp~~lyelml~Cw~-----~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  769 PPACPQGLYELMLRCWR-----RESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             CCcCcHHHHHHHHHHhc-----hhhhcCCCHHHHHHHHHHhc
Confidence            56788999999999999     99999999999999998653

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-34  Score=259.13  Aligned_cols=216  Identities=20%  Similarity=0.219  Sum_probs=181.7

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR  142 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~  142 (304)
                      ..+||-|.||.||...++.   -.-.||||.++.+...- +|..|.. |+.++|||+|+++|+|...... |||+|||..
T Consensus       272 khKLGGGQYGeVYeGvWKk---yslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF-YIiTEfM~y  347 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF-YIITEFMCY  347 (1157)
T ss_pred             eeccCCCcccceeeeeeec---cceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe-EEEEecccC
Confidence            5689999999999998873   34789999999876654 6666666 9999999999999999988555 999999999


Q ss_pred             CChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCCCccc
Q 046594          143 GSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNC  221 (304)
Q Consensus       143 gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  221 (304)
                      |+|.++|++.+. .++.-..+.++.||..||+||   .++++|||||..+|+|+.++..+|++|||+++++..+......
T Consensus       348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYL---EkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA  424 (1157)
T KOG4278|consen  348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA  424 (1157)
T ss_pred             ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHH---HHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceeccc
Confidence            999999998765 677788899999999999999   6668999999999999999999999999999999877653333


Q ss_pred             cc-------------Ccccc--ccccc---------------CCCCc-----ceeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          222 EK-------------TSEMA--EDIND---------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       222 ~~-------------~~~~s--~DV~S---------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                      |.             ...++  +|||+               +++-+     +++....   +-+-|+.|++.+.+||++
T Consensus       425 GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy---RM~~PeGCPpkVYeLMra  501 (1157)
T KOG4278|consen  425 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY---RMDGPEGCPPKVYELMRA  501 (1157)
T ss_pred             CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc---cccCCCCCCHHHHHHHHH
Confidence            33             22222  99999               33322     5555666   667788999999999999


Q ss_pred             hccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          267 CISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       267 cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ||+     ++|.+||++.|+-+.+|.+-.
T Consensus       502 CW~-----WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  502 CWN-----WSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             Hhc-----CCcccCccHHHHHHHHHHHhc
Confidence            999     999999999999999998754

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-34  Score=237.86  Aligned_cols=203  Identities=22%  Similarity=0.239  Sum_probs=171.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +..|++++.+|.|+||.|.+++.+   .+|..+|+|+++....-+     ....|.. |+.+.||+++++++.|.+. ..
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k---~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~-~~  118 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREK---HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN-SN  118 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEc---cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC-Ce
Confidence            567889999999999999999987   458999999998765433     4556777 9999999999999999988 55


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||.+||.|..++++.+ ++++..+..++.||+.||+|||..   +|++|||||+|||+|.+|.+||+|||+|+.+
T Consensus       119 lymvmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v  194 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRV  194 (355)
T ss_pred             EEEEEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence            599999999999999999988 899999999999999999999665   7999999999999999999999999999998


Q ss_pred             CCCCCCcccccCcccc------------ccccc-----------CCC---Cc------ceeccccCCCCCCcchHHHHHH
Q 046594          213 SGGSNRRNCEKTSEMA------------EDIND-----------FVG---GQ------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       213 ~~~~~~~~~~~~~~~s------------~DV~S-----------~~~---~~------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ... +.+.||++.|++            +|-|+           +++   +.      .++...+     .+|...+..+
T Consensus       195 ~~r-T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v-----~fP~~fs~~~  268 (355)
T KOG0616|consen  195 SGR-TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV-----KFPSYFSSDA  268 (355)
T ss_pred             cCc-EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc-----cCCcccCHHH
Confidence            776 556677744444            89999           221   11      3333333     6788888999


Q ss_pred             HHHHHHhccccCCCCCCCCC
Q 046594          261 GDIEKWCISCCSNIEGNENH  280 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~R  280 (304)
                      .+|+.+.++     .|-.+|
T Consensus       269 kdLl~~LL~-----vD~t~R  283 (355)
T KOG0616|consen  269 KDLLKKLLQ-----VDLTKR  283 (355)
T ss_pred             HHHHHHHHh-----hhhHhh
Confidence            999999999     999988

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.1e-32  Score=238.97  Aligned_cols=219  Identities=21%  Similarity=0.217  Sum_probs=171.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..|.+.+.+|+|++|.||++.++   ..+..+|+|......... .+..|+. ++.++|+||+++++++...+.. +++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~lv~   81 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF-YIIT   81 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEe---cCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCc-EEEE
Confidence            45788899999999999999876   346899999987654332 6667777 9999999999999999887544 9999


Q ss_pred             eecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++++|.+++..... .+++..++.++.|++.||+|||.   .+++||||||+||+++.++.+||+|||++.......
T Consensus        82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~  158 (263)
T cd05052          82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  158 (263)
T ss_pred             EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence            99999999999876543 68999999999999999999965   489999999999999999999999999998765432


Q ss_pred             CC---ccc-----cc-----Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHHHHH
Q 046594          217 NR---RNC-----EK-----TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~~---~~~-----~~-----~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ..   ...     ..     ...++  +||||        ...+.            ..+....   ....+...+..+.
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  235 (263)
T cd05052         159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY---RMERPEGCPPKVY  235 (263)
T ss_pred             eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---CCCCCCCCCHHHH
Confidence            20   000     00     12222  89999        11011            1112222   3345566678899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      +++.+||+     .||++|||+.++++.|+.+
T Consensus       236 ~li~~cl~-----~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         236 ELMRACWQ-----WNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHcc-----CCcccCCCHHHHHHHHHhh
Confidence            99999999     9999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=9.9e-33  Score=238.23  Aligned_cols=219  Identities=21%  Similarity=0.277  Sum_probs=170.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      +++|++.+.+|+|+||.||++..+     |..+++|..+.......+.+|+. +++++|+|++++++++...++..++++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   79 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc-----CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence            468999999999999999988653     67899999976655556777777 999999999999998776656669999


Q ss_pred             eecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++++|.+++..... .+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++.......
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~  156 (256)
T cd05082          80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  156 (256)
T ss_pred             ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence            99999999999987544 58999999999999999999965   489999999999999999999999999988654332


Q ss_pred             CC--ccccc-------Ccccc--cccccCC--------CCc---------ce---eccccCCCCCCcchHHHHHHHHHHH
Q 046594          217 NR--RNCEK-------TSEMA--EDINDFV--------GGQ---------EC---LDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       217 ~~--~~~~~-------~~~~s--~DV~S~~--------~~~---------~~---~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ..  ....+       ...++  +||||++        .+.         +.   +....   ....+..++..+.+++.
T Consensus       157 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~  233 (256)
T cd05082         157 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---KMDAPDGCPPVVYDVMK  233 (256)
T ss_pred             CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCCHHHHHHHH
Confidence            21  11111       22233  9999911        011         00   11111   22334456788999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      +||+     .+|++|||+.++++.|+.+
T Consensus       234 ~~l~-----~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         234 QCWH-----LDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHhc-----CChhhCcCHHHHHHHHhcC
Confidence            9999     9999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.5e-33  Score=244.25  Aligned_cols=216  Identities=28%  Similarity=0.334  Sum_probs=161.9

Q ss_pred             ccccccCCccccceeeecce-eecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           63 RMLKSFGDSVEGLTLIKGDR-AVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~-~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+.+.||.|.||.||++.+. .....+..|+||.++.....   +.+.+++. +++++||||++++|++...+. .++|+
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~-~~lv~   80 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP-LFLVM   80 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS-EEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccc-ccccc
Confidence            35678999999999999987 23345688999999664333   37777888 999999999999999996644 59999


Q ss_pred             eecCCCChhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|.+++... ...+++..++.|+.|++.||+|||+.   +++|+||+++|||++.++.+||+|||++.......
T Consensus        81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~  157 (259)
T PF07714_consen   81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS  157 (259)
T ss_dssp             E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            999999999999987 44899999999999999999999765   79999999999999999999999999998773222


Q ss_pred             C----Cccccc----------Ccccc--ccccc--------CC----CCc-----c---eeccccCCCCCCcchHHHHHH
Q 046594          217 N----RRNCEK----------TSEMA--EDIND--------FV----GGQ-----E---CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       217 ~----~~~~~~----------~~~~s--~DV~S--------~~----~~~-----~---~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .    ......          ....+  +||||        +.    +..     +   .+....   +...+..++..+
T Consensus       158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  234 (259)
T PF07714_consen  158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ---RLPIPDNCPKDI  234 (259)
T ss_dssp             SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE---ETTSBTTSBHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cceeccchhHHH
Confidence            1    001111          22233  99999        11    111     1   111111   234556678889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      .+++.+||.     .||++|||+.++++.|
T Consensus       235 ~~li~~C~~-----~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  235 YSLIQQCWS-----HDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHT------SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHcC-----CChhhCcCHHHHHhcC
Confidence            999999999     9999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.3e-32  Score=242.23  Aligned_cols=224  Identities=21%  Similarity=0.243  Sum_probs=171.4

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.+|+|+||.||++..+...  .....+|+|.........   .+..|+. ++++ +|+||+++++++..++.
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            467899999999999999998876443  345789999987643332   5666777 8888 89999999999987754


Q ss_pred             ceEEEEeecCCCChhhHhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC
Q 046594          132 RRCLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD  196 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~  196 (304)
                       ++++|||+++|+|.+++...               ...+++..++.++.|++.||+|||+.   +++||||||+|||++
T Consensus        91 -~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~  166 (293)
T cd05053          91 -LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT  166 (293)
T ss_pred             -eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence             59999999999999998643               22689999999999999999999754   899999999999999


Q ss_pred             CCCCeeEcccccccccCCCCC----Ccc---ccc-------Ccccc--cccccCCC--------Cc------------ce
Q 046594          197 ELCNAKLAGFGAANYCSGGSN----RRN---CEK-------TSEMA--EDINDFVG--------GQ------------EC  240 (304)
Q Consensus       197 ~~~~~kl~Dfgla~~~~~~~~----~~~---~~~-------~~~~s--~DV~S~~~--------~~------------~~  240 (304)
                      .++.++|+|||+++.......    ...   ..+       ...++  +||||++-        +.            ..
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  246 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL  246 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            999999999999987644321    000   000       12222  89999110        11            11


Q ss_pred             eccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          241 LDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      +....   ....+..+...+.+++.+||+     .||++|||+.++++.|+.+.
T Consensus       247 ~~~~~---~~~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         247 LKEGY---RMEKPQNCTQELYHLMRDCWH-----EVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHcCC---cCCCCCCCCHHHHHHHHHHcc-----cCcccCcCHHHHHHHHHHhh
Confidence            11111   223445567889999999999     99999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-33  Score=231.05  Aligned_cols=224  Identities=20%  Similarity=0.207  Sum_probs=174.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCC----C
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGL----Q  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~----~  131 (304)
                      .+||++.+.+|+|||+.||++..-   .++..+|+|++.-...++  ...+|+. .++++|||+++++++...+.    .
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~---s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGL---STGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             CceEEEeeeecCCCceeeeeeccc---CcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            469999999999999999998854   467899999998766444  5566777 99999999999999875432    2


Q ss_pred             ceEEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      ..||+++|...|+|.+.++..   +..+++.+.+.|+.++++||++||+. .++++||||||.|||+.+++.++|.|||.
T Consensus        97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS  175 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS  175 (302)
T ss_pred             eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence            359999999999999988764   22799999999999999999999875 34699999999999999999999999999


Q ss_pred             ccccCCCCC---------------Cccccc---------Ccccc--ccccc---------C---------CCCc----ce
Q 046594          209 ANYCSGGSN---------------RRNCEK---------TSEMA--EDIND---------F---------VGGQ----EC  240 (304)
Q Consensus       209 a~~~~~~~~---------------~~~~~~---------~~~~s--~DV~S---------~---------~~~~----~~  240 (304)
                      +....-...               .+...+         ...++  +||||         |         ..+.    .+
T Consensus       176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv  255 (302)
T KOG2345|consen  176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV  255 (302)
T ss_pred             ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee
Confidence            876532211               001111         22333  99999         1         1111    44


Q ss_pred             eccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          241 LDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      ...++.+|+.   ...++.+.+++++|++     .||.+||++.+++.+++.+.
T Consensus       256 ~n~q~s~P~~---~~yse~l~~lik~mlq-----vdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  256 QNAQISIPNS---SRYSEALHQLIKSMLQ-----VDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             eccccccCCC---CCccHHHHHHHHHHhc-----CCcccCCCHHHHHHHHHhhc
Confidence            5556633322   2378899999999999     99999999999999998764

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1e-32  Score=241.57  Aligned_cols=223  Identities=22%  Similarity=0.289  Sum_probs=171.2

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ...|++.+.||+|+||.||++...+..  .....+++|.+.......   .+.+|+. ++.++||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT   83 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence            357899999999999999998875432  234689999987554332   6777888 9999999999999999877544


Q ss_pred             eEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC
Q 046594          133 RCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE  197 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~  197 (304)
                       +++|||+++|+|.+++....               ..+++..+..++.|++.||+|||+.   +++||||||+||+++.
T Consensus        84 -~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~  159 (283)
T cd05048          84 -CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE  159 (283)
T ss_pred             -EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence             99999999999999987642               2578899999999999999999654   8999999999999999


Q ss_pred             CCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CCCCc---------ce---e
Q 046594          198 LCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ---------EC---L  241 (304)
Q Consensus       198 ~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~---~  241 (304)
                      ++.++|+|||+++.......    ....++          .+.++  +||||        +..+.         ++   +
T Consensus       160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i  239 (283)
T cd05048         160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI  239 (283)
T ss_pred             CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999999999976533221    000000          22233  89999        11011         11   1


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ....   ....+..++.++.+|+.+||+     .||++||++.+++++|+++
T Consensus       240 ~~~~---~~~~~~~~~~~~~~l~~~c~~-----~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         240 RSRQ---LLPCPEDCPARVYALMIECWN-----EIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HcCC---cCCCcccCCHHHHHHHHHHcc-----CChhhCcCHHHHHHHHhcC
Confidence            1111   233456678899999999999     9999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-33  Score=251.49  Aligned_cols=216  Identities=20%  Similarity=0.188  Sum_probs=166.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ...|++.+.||+|+||.||++.++.   +++.+|+|.+......     ..+..|+. +++++||||+++++++...+ .
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~   92 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKG---TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN-R   92 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-E
Confidence            4679999999999999999998863   4789999998754321     25667777 99999999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  168 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKV  168 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEc
Confidence            599999999999999998766 789999999999999999999664   8999999999999999999999999999876


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ..... ...++          ....+  +||||              |....  +...... .....++...+..+.+++
T Consensus       169 ~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~li  246 (329)
T PTZ00263        169 PDRTF-TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKIL-AGRLKFPNWFDGRARDLV  246 (329)
T ss_pred             CCCcc-eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHh-cCCcCCCCCCCHHHHHHH
Confidence            44322 11122          11122  99999              11111  1111110 001234444567889999


Q ss_pred             HHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      .+||+     .||.+||+     +.++++|
T Consensus       247 ~~~L~-----~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        247 KGLLQ-----TDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             HHHhh-----cCHHHcCCCCCCCHHHHhcC
Confidence            99999     99999997     6888876

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.4e-32  Score=239.09  Aligned_cols=227  Identities=19%  Similarity=0.169  Sum_probs=168.9

Q ss_pred             HHhhccccccCCccccceeeecceeecC-CCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ...|++.+.||+|+||.||++.+..... ....+++|.........   .+..+.. +++++||||+++++++... . .
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~-~-~   83 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA-S-L   83 (279)
T ss_pred             HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-c-c
Confidence            4578999999999999999988753211 11258888886543332   5556666 8899999999999988643 3 4


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++++||+++|+|.+++......+++..+..++.|++.||+|||+   ++++||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            89999999999999998766689999999999999999999965   489999999999999999999999999998654


Q ss_pred             CCCC---C-ccccc----------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHH
Q 046594          214 GGSN---R-RNCEK----------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       214 ~~~~---~-~~~~~----------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ....   . ...+.          .+.++  +||||        ...+.            +++....   ....+..+.
T Consensus       161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  237 (279)
T cd05111         161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGE---RLAQPQICT  237 (279)
T ss_pred             CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---cCCCCCCCC
Confidence            3221   0 00111          22233  89999        11011            1111111   112233455


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+.+++.+||.     .||++|||+.++++.|+.+.+.+-
T Consensus       238 ~~~~~li~~c~~-----~~p~~Rps~~el~~~l~~~~~~~~  273 (279)
T cd05111         238 IDVYMVMVKCWM-----IDENVRPTFKELANEFTRMARDPP  273 (279)
T ss_pred             HHHHHHHHHHcC-----CCcccCcCHHHHHHHHHHHHhCCc
Confidence            678899999999     999999999999999999887653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-33  Score=248.79  Aligned_cols=214  Identities=21%  Similarity=0.186  Sum_probs=165.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|+||.||++.++.   +++.+|+|.+.....     ...+.+|+. ++.++||||+++++++.+. ..++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~   77 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRI---SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ-RFLY   77 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC-CeEE
Confidence            68899999999999999998763   478999999875332     125667777 9999999999999998877 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus        78 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612          78 MLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            9999999999999998766 79999999999999999999965   4899999999999999999999999999987644


Q ss_pred             CCCCccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          215 GSNRRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       215 ~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                      ... ...++          ....+  +||||              |....  ++..... .....++......+.+++.+
T Consensus       154 ~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~  231 (291)
T cd05612         154 RTW-TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKIL-AGKLEFPRHLDLYAKDLIKK  231 (291)
T ss_pred             Ccc-cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hCCcCCCccCCHHHHHHHHH
Confidence            322 11111          11122  89999              11111  1111111 00123455557789999999


Q ss_pred             hccccCCCCCCCCCCC-----HHHHHHH
Q 046594          267 CISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       267 cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      ||+     .||.+||+     +.++++|
T Consensus       232 ~l~-----~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         232 LLV-----VDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HcC-----CCHHHccCCccCCHHHHhcC
Confidence            999     99999995     8898876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2e-32  Score=240.11  Aligned_cols=223  Identities=17%  Similarity=0.216  Sum_probs=170.6

Q ss_pred             HhhccccccCCccccceeeecceee-cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCC-CCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~  133 (304)
                      +-|++.+.||+|+||.||.+.+... ...+..+|+|.++......   .+.+|+. ++.++|||++++++++... ....
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            4578999999999999999876432 2457899999987554332   6777888 9999999999999998775 2445


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++++|.+++......+++..++.++.|++.||+|||+.   |++||||||+||+++.++.++|+|||+++...
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE  160 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccc
Confidence            899999999999999977655789999999999999999999654   89999999999999999999999999998654


Q ss_pred             CCCC----C-ccccc----------Ccccc--cccccCCC-----------Cc---c----ee----------------c
Q 046594          214 GGSN----R-RNCEK----------TSEMA--EDINDFVG-----------GQ---E----CL----------------D  242 (304)
Q Consensus       214 ~~~~----~-~~~~~----------~~~~s--~DV~S~~~-----------~~---~----~~----------------~  242 (304)
                      ....    . ...+.          ...++  +||||++-           ..   .    ..                .
T Consensus       161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05079         161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE  240 (284)
T ss_pred             cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH
Confidence            3221    0 00000          12233  99999210           00   0    00                0


Q ss_pred             cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          243 QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       243 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ...   ....+...+..+.+++.+||+     .||++|||+.++++.|+.+
T Consensus       241 ~~~---~~~~~~~~~~~~~~li~~~l~-----~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         241 EGK---RLPRPPNCPEEVYQLMRKCWE-----FQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             cCc---cCCCCCCCCHHHHHHHHHHcc-----CCcccCcCHHHHHHHHHhh
Confidence            000   112234456889999999999     9999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.9e-32  Score=239.51  Aligned_cols=227  Identities=17%  Similarity=0.156  Sum_probs=172.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCC-CcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRN-LTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~-~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|+..+.||+|+||.||++.+...... ...||+|.+.......   .+.+|.. ++.++|+||+++++++... .. 
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~-   83 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV-   83 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc-
Confidence            46789999999999999999986533211 2358999987544332   5666666 9999999999999998764 34 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++++||+++|+|.+++......+++..++.++.|++.||+|||+   ++++||||||+|||++.++.+||+|||+++...
T Consensus        84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence            89999999999999998765579999999999999999999965   489999999999999999999999999998764


Q ss_pred             CCCC--Cc--cccc----------Ccccc--cccccC--------CCCc------------ceeccccCCCCCCcchHHH
Q 046594          214 GGSN--RR--NCEK----------TSEMA--EDINDF--------VGGQ------------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       214 ~~~~--~~--~~~~----------~~~~s--~DV~S~--------~~~~------------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ....  ..  ..+.          ...++  +||||+        ..+.            ..+....   ....+..++
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  237 (279)
T cd05109         161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE---RLPQPPICT  237 (279)
T ss_pred             cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---cCCCCccCC
Confidence            3222  00  0000          12222  899991        1011            0111111   122344566


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+.+++.+||.     .||++||++.++++.|+.+...+.
T Consensus       238 ~~~~~li~~~l~-----~dp~~Rp~~~~l~~~l~~~~~~~~  273 (279)
T cd05109         238 IDVYMIMVKCWM-----IDSECRPRFRELVDEFSRMARDPS  273 (279)
T ss_pred             HHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHhhcCCc
Confidence            789999999999     999999999999999999877664

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.4e-32  Score=238.78  Aligned_cols=226  Identities=17%  Similarity=0.186  Sum_probs=171.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.+|+|+||.||++..+.....+..+|+|.++......   .+..|+. +++++||||+++++++..++. .+
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~   81 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP-VM   81 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc-cE
Confidence            358899999999999999998875433344689999987543322   6677777 999999999999999987754 59


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ++|||+++++|.+++......+++.+++.++.|++.||+|||+.   +++||||||+|||++.++.++|+|||++.....
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            99999999999999987766789999999999999999999654   899999999999999999999999999987644


Q ss_pred             CCC---Cccc-------cc-----Ccccc--cccccCC--------CCc---------ceeccccCCCCCCcchHHHHHH
Q 046594          215 GSN---RRNC-------EK-----TSEMA--EDINDFV--------GGQ---------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       215 ~~~---~~~~-------~~-----~~~~s--~DV~S~~--------~~~---------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ...   ....       ..     ...++  +||||++        .+.         +..+......+...+...+..+
T Consensus       159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd05066         159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAAL  238 (267)
T ss_pred             ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHH
Confidence            322   0000       00     12233  8999911        111         0000000000112233456788


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+++.+||+     .+|.+||++.++++.|+++
T Consensus       239 ~~li~~~l~-----~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         239 HQLMLDCWQ-----KDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHHcc-----cCchhCCCHHHHHHHHHhh
Confidence            999999999     9999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-32  Score=242.72  Aligned_cols=219  Identities=23%  Similarity=0.259  Sum_probs=172.9

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCC---CceEEEEee
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGL---QRRCLVFEF  139 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~---~~~~lv~e~  139 (304)
                      .+.+|+|.||.||++...     ++.||||++.....+. .-+.++. +-.++|+||++++++-....   ..++||+||
T Consensus       215 ~eli~~Grfg~V~KaqL~-----~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f  289 (534)
T KOG3653|consen  215 LELIGRGRFGCVWKAQLD-----NRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF  289 (534)
T ss_pred             HHHhhcCccceeehhhcc-----CceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence            357899999999998874     4899999999877666 3334444 77889999999999865543   245999999


Q ss_pred             cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhh------cCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCM------YSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       140 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~------~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      .+.|+|.++|..+  .++|....+++..+++||+|||+      .|+++|+|||||++||||..|++..|+|||+|..+.
T Consensus       290 h~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~  367 (534)
T KOG3653|consen  290 HPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE  367 (534)
T ss_pred             ccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence            9999999999987  59999999999999999999995      467899999999999999999999999999999887


Q ss_pred             CCCC----CcccccCcccc------------------ccccc---------------CCC--Cc----------------
Q 046594          214 GGSN----RRNCEKTSEMA------------------EDIND---------------FVG--GQ----------------  238 (304)
Q Consensus       214 ~~~~----~~~~~~~~~~s------------------~DV~S---------------~~~--~~----------------  238 (304)
                      ....    ....|+.+||+                  .||||               +++  .+                
T Consensus       368 p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e  447 (534)
T KOG3653|consen  368 PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE  447 (534)
T ss_pred             CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence            6554    44556533333                  78999               110  00                


Q ss_pred             ----ceeccccCCCCCCcch-----HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          239 ----ECLDQRLYIPNEKFKI-----TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       239 ----~~~~~~~~~~~~~~~~-----~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                          -++..+.   +..++.     .....+++.+..||+     .||+.|.|+.-+.+.+..+..+..
T Consensus       448 ~mq~~VV~kK~---RP~~p~~W~~h~~~~~l~et~EeCWD-----hDaeARLTA~Cv~eR~~~l~~~~~  508 (534)
T KOG3653|consen  448 EMQELVVRKKQ---RPKIPDAWRKHAGMAVLCETIEECWD-----HDAEARLTAGCVEERMAELMMLWE  508 (534)
T ss_pred             HHHHHHHhhcc---CCCChhhhhcCccHHHHHHHHHHHcC-----CchhhhhhhHHHHHHHHHHhccCC
Confidence                1122222   233332     235668899999999     999999999999999988887664

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.6e-32  Score=236.35  Aligned_cols=211  Identities=21%  Similarity=0.228  Sum_probs=163.2

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++..+   .+++.+|+|........+   .+.+|+. +++++||||+++++++..... +++||||++
T Consensus         1 ~~lg~g~~g~vy~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e~~~   76 (252)
T cd05084           1 ERIGRGNFGEVFSGRLR---ADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP-IYIVMELVQ   76 (252)
T ss_pred             CccCcccCccEEEEEEe---cCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCC-eEEEEeecc
Confidence            46899999999998875   357899999876543322   6777777 999999999999999988754 599999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCCCcc-
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN-  220 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-  220 (304)
                      +++|.+++......+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++........... 
T Consensus        77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  153 (252)
T cd05084          77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG  153 (252)
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence            999999998765578999999999999999999965   4899999999999999999999999999876443211000 


Q ss_pred             --------cc-----cCcccc--ccccc--------C----CCCc--------ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          221 --------CE-----KTSEMA--EDIND--------F----VGGQ--------ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       221 --------~~-----~~~~~s--~DV~S--------~----~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                              ..     ..+.++  +||||        .    .+..        ..+....   ....+...+..+.+++.
T Consensus       154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~  230 (252)
T cd05084         154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV---RLPCPELCPDAVYRLME  230 (252)
T ss_pred             CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC---CCCCcccCCHHHHHHHH
Confidence                    00     012223  89999        1    0110        1111112   23444556788999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      +||.     .+|++|||+.++++.|+
T Consensus       231 ~~l~-----~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         231 RCWE-----YDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHcC-----CChhhCcCHHHHHHHHh
Confidence            9999     99999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.2e-32  Score=237.62  Aligned_cols=218  Identities=20%  Similarity=0.225  Sum_probs=165.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..|++.+.||+|+||.||++..+    ++..+|+|.+..... ...+..|+. +++++||||+++++++...+. ++++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~----~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~iv~   78 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR----AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKP-LYIVT   78 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec----cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCC-EEEEE
Confidence            46888999999999999998764    346899998875443 336777887 999999999999999988754 59999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++|+|.+++......+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||+++.......
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05114          79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY  155 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence            99999999999986555789999999999999999999654   899999999999999999999999999886543222


Q ss_pred             C---cccc---c-------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          218 R---RNCE---K-------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       218 ~---~~~~---~-------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      .   ...+   .       ...++  +||||        +..+.         +.............+...+..+.+++.
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~  235 (256)
T cd05114         156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMY  235 (256)
T ss_pred             eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence            1   0000   0       11222  99999        11111         111100000011223344577899999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      +||.     .+|++|||+.++++.|
T Consensus       236 ~c~~-----~~p~~Rps~~~l~~~l  255 (256)
T cd05114         236 SCWH-----EKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHcc-----CCcccCcCHHHHHHhh
Confidence            9999     9999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=3.1e-32  Score=236.82  Aligned_cols=222  Identities=16%  Similarity=0.231  Sum_probs=171.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..|++.+.||+|+||.||++..+.....+..+|+|.+.......   .+..|+. ++.++||||+++++++..++.. ++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~-~l   82 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV-MI   82 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce-EE
Confidence            46889999999999999999887554445689999987643322   7777888 9999999999999998877544 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++....+.+++.+++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  159 (269)
T cd05065          83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD  159 (269)
T ss_pred             EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccC
Confidence            9999999999999987665789999999999999999999754   8999999999999999999999999998765432


Q ss_pred             CC----Ccccc--------c-----Ccccc--cccccCC--------CCc---------ce---eccccCCCCCCcchHH
Q 046594          216 SN----RRNCE--------K-----TSEMA--EDINDFV--------GGQ---------EC---LDQRLYIPNEKFKITS  256 (304)
Q Consensus       216 ~~----~~~~~--------~-----~~~~s--~DV~S~~--------~~~---------~~---~~~~~~~~~~~~~~~~  256 (304)
                      ..    ....+        .     ...++  +||||++        .+.         +.   +....   ....+.++
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~  236 (269)
T cd05065         160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY---RLPPPMDC  236 (269)
T ss_pred             ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---cCCCcccC
Confidence            21    00000        0     12223  8999911        011         00   00111   12233456


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      +..+.+++.+||.     .+|++||++.+++..|+++
T Consensus       237 ~~~~~~li~~~l~-----~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         237 PTALHQLMLDCWQ-----KDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHhh
Confidence            6789999999999     9999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=2.1e-32  Score=236.77  Aligned_cols=219  Identities=21%  Similarity=0.204  Sum_probs=168.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+++|+|++|.||++.+.    ++..+|+|.+...... ..+.+|+. ++.++|+||+++++++...+.. +++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~----~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~lv   79 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN----NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI-YII   79 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec----CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc-EEE
Confidence            568999999999999999998754    4578999998754433 36777777 9999999999999998877554 999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++|+|.+++.... ..+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  156 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN  156 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence            99999999999997653 3789999999999999999999764   7999999999999999999999999999876543


Q ss_pred             CC---Ccccc---c-------Ccccc--ccccc--------CCCCc---------ce---eccccCCCCCCcchHHHHHH
Q 046594          216 SN---RRNCE---K-------TSEMA--EDIND--------FVGGQ---------EC---LDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~---~~~~~---~-------~~~~s--~DV~S--------~~~~~---------~~---~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..   ....+   +       .+..+  +||||        ...+.         ..   +....   ........+..+
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  233 (261)
T cd05072         157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY---RMPRMENCPDEL  233 (261)
T ss_pred             ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHH
Confidence            21   11111   0       12223  89999        11011         00   01111   112223456789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+++.+||.     .+|++|||++++.+.|+++
T Consensus       234 ~~li~~~l~-----~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         234 YDIMKTCWK-----EKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HHHHHHHcc-----CCcccCcCHHHHHHHHhcC
Confidence            999999999     9999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.1e-32  Score=249.29  Aligned_cols=214  Identities=20%  Similarity=0.174  Sum_probs=161.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ...|+..+.||+|+||.||++.+.   .+++.||||++.......   .+.+|+. ++.++|+||+++++++...+ .++
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~  148 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHR---PTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-EIQ  148 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEEC---CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC-eEE
Confidence            356788899999999999999875   357899999986544332   6777887 99999999999999998774 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+..     ..++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++....
T Consensus       149 lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~  220 (353)
T PLN00034        149 VLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ  220 (353)
T ss_pred             EEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence            999999999986532     456788889999999999999764   899999999999999999999999999986643


Q ss_pred             CCC--Cccccc---------------Cccc--cccccc--------------CCCCc-----ceeccccCCCCCCcchHH
Q 046594          215 GSN--RRNCEK---------------TSEM--AEDIND--------------FVGGQ-----ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       215 ~~~--~~~~~~---------------~~~~--s~DV~S--------------~~~~~-----~~~~~~~~~~~~~~~~~~  256 (304)
                      ...  ....++               ..+.  .+||||              |....     ..............+...
T Consensus       221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (353)
T PLN00034        221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATA  300 (353)
T ss_pred             ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCcc
Confidence            221  111111               1111  389999              11100     000000000012334556


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..+.+++.+||.     .||++|||+.|+++|
T Consensus       301 ~~~l~~li~~~l~-----~~P~~Rpt~~ell~h  328 (353)
T PLN00034        301 SREFRHFISCCLQ-----REPAKRWSAMQLLQH  328 (353)
T ss_pred             CHHHHHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            7889999999999     999999999999986

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.3e-32  Score=246.81  Aligned_cols=148  Identities=17%  Similarity=0.193  Sum_probs=129.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++   .++..+|+|.+.......   .+..|+. ++.++||||+++++++...+ .++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   79 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHK---PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EIS   79 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEEC---CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC-EEE
Confidence            468999999999999999999876   356889999987653332   6777777 99999999999999998874 559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.+  +++||||||+|||++.++.+||+|||++....
T Consensus        80 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~  155 (333)
T cd06650          80 ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (333)
T ss_pred             EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence            9999999999999998765 7899999999999999999998533  69999999999999999999999999987653

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.4e-32  Score=237.54  Aligned_cols=219  Identities=21%  Similarity=0.219  Sum_probs=166.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      +.|++.+.+|+|+||.||.+.+.    ++..+|+|.+..... .+.+.+|+. +++++||||+++++++...+. ++++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~----~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~   78 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRP-IYIVT   78 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEec----CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCC-cEEEE
Confidence            57899999999999999998764    245699998875443 336777877 999999999999999987754 49999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++|+|.+++......+++..++.++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||+++.......
T Consensus        79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05113          79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY  155 (256)
T ss_pred             EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence            99999999999987655789999999999999999999654   899999999999999999999999999886543322


Q ss_pred             C---ccccc----------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          218 R---RNCEK----------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       218 ~---~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      .   ...+.          ...++  +||||        +..+.         +..+..........+...+..+.+++.
T Consensus       156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  235 (256)
T cd05113         156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMY  235 (256)
T ss_pred             eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            1   11110          12223  99999        11011         111111100012233445678999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      +||+     .||.+|||+.++++.|+
T Consensus       236 ~cl~-----~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         236 SCWH-----EKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHcC-----CCcccCCCHHHHHHhhC
Confidence            9999     99999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=5.9e-33  Score=244.08  Aligned_cols=147  Identities=24%  Similarity=0.287  Sum_probs=126.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +.+|++.+.||+|+||.||++.++.   ++..||+|.++.....   ..+.+|+. +++++||||+++++++...+ ..+
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~   79 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER-CLT   79 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECC---CCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC-eEE
Confidence            4579999999999999999998763   4789999998754322   25556777 99999999999999998774 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +||||+++ +|.+++...+..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        80 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          80 LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             EEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            99999975 9999988766578999999999999999999965   489999999999999999999999999987653

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.1e-32  Score=252.58  Aligned_cols=227  Identities=19%  Similarity=0.185  Sum_probs=167.9

Q ss_pred             HhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCC-CCcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSS-HLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~  132 (304)
                      .+|++.+.||+|+||.||++.+.+..  ..+..||||++.......   .+..|+. ++++. ||||+++++++...+. 
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~-  115 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP-  115 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc-
Confidence            46788999999999999998875432  234579999997544332   5666777 99995 9999999999988744 


Q ss_pred             eEEEEeecCCCChhhHhhhcC-----------------------------------------------------------
Q 046594          133 RCLVFEFMQRGSLRWNLREKG-----------------------------------------------------------  153 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~-----------------------------------------------------------  153 (304)
                      +|+||||+++|+|.+++....                                                           
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            599999999999999886431                                                           


Q ss_pred             ------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC
Q 046594          154 ------------------------------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE  197 (304)
Q Consensus       154 ------------------------------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~  197 (304)
                                                          ..+++..+..++.|++.||+|||+   .+++||||||+|||++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeC
Confidence                                                147788899999999999999965   48999999999999999


Q ss_pred             CCCeeEcccccccccCCCCC----Cccccc----------Ccccc--cccccC--------CCCc-----ceecc----c
Q 046594          198 LCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDINDF--------VGGQ-----ECLDQ----R  244 (304)
Q Consensus       198 ~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S~--------~~~~-----~~~~~----~  244 (304)
                      ++.+||+|||+++.......    ....++          ...++  +||||+        ..+.     ...+.    .
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~  352 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNK  352 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHH
Confidence            99999999999986543221    111111          12223  899991        1010     00000    0


Q ss_pred             cC-CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          245 LY-IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       245 ~~-~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +. ......+...+..+.+++.+||+     .||++|||+.++.++|+++.+
T Consensus       353 ~~~~~~~~~~~~~~~~l~~li~~cl~-----~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         353 IKSGYRMAKPDHATQEVYDIMVKCWN-----SEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HhcCCCCCCCccCCHHHHHHHHHHCc-----cCHhHCcCHHHHHHHHHHHcC
Confidence            00 00122344566789999999999     999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=9.5e-34  Score=254.53  Aligned_cols=215  Identities=22%  Similarity=0.180  Sum_probs=177.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|.+.+.+|+|.||.||+++.+.+   .+.||+|.+......+    .+++|+. ++.++||||+.++++|... .++|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t---~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~-~~~~   77 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYT---IQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS-AHLW   77 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccc---eeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc-ceEE
Confidence            4788999999999999999998854   5899999998655443    5778888 9999999999999999988 5669


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +|+||+.| +|..++...+ .++++.+..++.++..||.|||..   +|+|||+||.|||++.+|++|++|||+|+....
T Consensus        78 vVte~a~g-~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~  152 (808)
T KOG0597|consen   78 VVTEYAVG-DLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST  152 (808)
T ss_pred             EEehhhhh-hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc
Confidence            99999977 9999999888 899999999999999999999665   899999999999999999999999999998877


Q ss_pred             CCC--CcccccCcccc------------ccccc-----------CCCCc-----ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          215 GSN--RRNCEKTSEMA------------EDIND-----------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       215 ~~~--~~~~~~~~~~s------------~DV~S-----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ...  ....|++-||+            +|.||           .|+.-     +.+...+ .....+|...+..+..++
T Consensus       153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~-~d~v~~p~~~S~~f~nfl  231 (808)
T KOG0597|consen  153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSIL-KDPVKPPSTASSSFVNFL  231 (808)
T ss_pred             CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh-cCCCCCcccccHHHHHHH
Confidence            655  44455533333            99999           12111     2222221 112345668889999999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ...|.     +||.+|.|+.+++.|
T Consensus       232 ~gLL~-----kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  232 QGLLI-----KDPAQRLTWTDLLGH  251 (808)
T ss_pred             HHHhh-----cChhhcccHHHHhcC
Confidence            99999     999999999999875

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-33  Score=248.37  Aligned_cols=216  Identities=17%  Similarity=0.136  Sum_probs=164.0

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|+||.||++.+..   +++.||+|++......     ..+..|+. +..++||||+++++++...+ .+|
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-~~~   77 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKD---TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE-YLY   77 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC-EEE
Confidence            68999999999999999998763   4789999999754321     15566777 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++.....
T Consensus        78 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600          78 LAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence            9999999999999998765 799999999999999999999764   899999999999999999999999999986544


Q ss_pred             CCC--Cccccc-------Ccccc--cccccCC-----------CCc-----ceec------cccCCCC-CCcchHHHHHH
Q 046594          215 GSN--RRNCEK-------TSEMA--EDINDFV-----------GGQ-----ECLD------QRLYIPN-EKFKITSLAKL  260 (304)
Q Consensus       215 ~~~--~~~~~~-------~~~~s--~DV~S~~-----------~~~-----~~~~------~~~~~~~-~~~~~~~~~~l  260 (304)
                      ...  .++..+       ...++  +||||++           +..     +...      ..+..+. .......+..+
T Consensus       154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~  233 (333)
T cd05600         154 YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEA  233 (333)
T ss_pred             ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHH
Confidence            211  111111       22233  9999911           110     0000      0010000 00012346789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+++.+||.     .+|.+||++.++++|
T Consensus       234 ~~li~~~l~-----~~~~rr~s~~~ll~h  257 (333)
T cd05600         234 WDLITKLIN-----DPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHHHHhh-----ChhhhcCCHHHHHhC
Confidence            999999999     999999999999987

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.6e-32  Score=239.69  Aligned_cols=225  Identities=19%  Similarity=0.232  Sum_probs=167.4

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.+|+|+||.||.+.+++..  ..+..+|+|++.......   .+.+|+. ++.++||||+++++++..+.. 
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~-   83 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP-   83 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-
Confidence            468999999999999999998876542  245789999986543222   5666777 999999999999999987754 


Q ss_pred             eEEEEeecCCCChhhHhhhcCC---------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG---------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~---------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                      .++||||+++|+|.+++.....         .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence            4999999999999999875321         367888999999999999999764   8999999999999999999999


Q ss_pred             cccccccccCCCCC--C--ccccc----------Ccccc--cccccC--------CCCc---------ceeccccCCCCC
Q 046594          204 AGFGAANYCSGGSN--R--RNCEK----------TSEMA--EDINDF--------VGGQ---------ECLDQRLYIPNE  250 (304)
Q Consensus       204 ~Dfgla~~~~~~~~--~--~~~~~----------~~~~s--~DV~S~--------~~~~---------~~~~~~~~~~~~  250 (304)
                      +|||+++.......  .  ...++          ...++  +||||+        ..+.         +..+........
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~  240 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL  240 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            99999875533221  0  00001          12233  899991        0001         111000000012


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      ..+...+..+.+++.+||+     .||++|||+.+++++|++
T Consensus       241 ~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         241 DKPDNCPDMLFELMRMCWQ-----YNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcC-----CChhhCcCHHHHHHHhhC
Confidence            3345566789999999999     999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=3.1e-32  Score=241.62  Aligned_cols=229  Identities=21%  Similarity=0.252  Sum_probs=174.6

Q ss_pred             HhhccccccCCccccceeeecceeec----CCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVS----RNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGL  130 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~----~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~  130 (304)
                      .+|.+.+.||+|+||.||.+.+.+..    ..+..+|+|.+.......   .+.+|+. ++.+ +||||+++++++...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            58999999999999999998865432    234679999998643322   5556666 8888 7999999999998875


Q ss_pred             CceEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL  195 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill  195 (304)
                      . .++||||+++|+|.+++....               ..+++.+++.++.|++.||+|||+.   +++||||||+||++
T Consensus        98 ~-~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill  173 (307)
T cd05098          98 P-LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV  173 (307)
T ss_pred             c-eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence            4 499999999999999997642               1488999999999999999999754   89999999999999


Q ss_pred             CCCCCeeEcccccccccCCCCC----Cccc---cc-------Ccccc--ccccc--------CCCCc---------c---
Q 046594          196 DELCNAKLAGFGAANYCSGGSN----RRNC---EK-------TSEMA--EDIND--------FVGGQ---------E---  239 (304)
Q Consensus       196 ~~~~~~kl~Dfgla~~~~~~~~----~~~~---~~-------~~~~s--~DV~S--------~~~~~---------~---  239 (304)
                      +.++.++|+|||+++.......    ....   .+       ...++  +||||        ...+.         +   
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~  253 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK  253 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence            9999999999999876543211    0000   00       22233  89999        11011         1   


Q ss_pred             eeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhccc
Q 046594          240 CLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSV  300 (304)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~~  300 (304)
                      .+....   ..+.+...+..+.+++.+||.     .+|++|||+.++++.|+.+.+...+.
T Consensus       254 ~~~~~~---~~~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~evl~~l~~~~~~~~~~  306 (307)
T cd05098         254 LLKEGH---RMDKPSNCTNELYMMMRDCWH-----AVPSQRPTFKQLVEDLDRILALTSNQ  306 (307)
T ss_pred             HHHcCC---CCCCCCcCCHHHHHHHHHHcc-----cChhhCcCHHHHHHHHHHHHHHhhcC
Confidence            111111   223455667889999999999     99999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-33  Score=251.03  Aligned_cols=223  Identities=19%  Similarity=0.194  Sum_probs=180.4

Q ss_pred             ccccCCccccceeeecceeec-CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEee
Q 046594           65 LKSFGDSVEGLTLIKGDRAVS-RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~-~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~  139 (304)
                      .+.||+|-||.||.+.|.... ...-.||||..+.+...+   .|..|.. +++++||||++++|+|.+. .. |||||.
T Consensus       394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~-WivmEL  471 (974)
T KOG4257|consen  394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PM-WIVMEL  471 (974)
T ss_pred             HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ce-eEEEec
Confidence            468999999999999997652 233468999988754333   6666666 9999999999999999886 55 999999


Q ss_pred             cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-C
Q 046594          140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-R  218 (304)
Q Consensus       140 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~  218 (304)
                      ++.|.|..++..+...++......++.||+.||+|||   +++++||||..+|||+.+..-+||+|||+++.+..... .
T Consensus       472 ~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk  548 (974)
T KOG4257|consen  472 APLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK  548 (974)
T ss_pred             ccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchhh
Confidence            9999999999998889999999999999999999995   55899999999999999999999999999999987765 3


Q ss_pred             ccccc------------Ccccc--ccccc---------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHh
Q 046594          219 RNCEK------------TSEMA--EDIND---------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWC  267 (304)
Q Consensus       219 ~~~~~------------~~~~s--~DV~S---------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~c  267 (304)
                      ...+.            ...++  +|||-               |.+-+  +++-..-...+.+.|+.|++.+..|+.+|
T Consensus       549 aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskc  628 (974)
T KOG4257|consen  549 ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKC  628 (974)
T ss_pred             ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHH
Confidence            33333            23333  99998               11111  22222221225678899999999999999


Q ss_pred             ccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          268 ISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       268 l~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      |.     +||.+||++.++...|+.+.+.+
T Consensus       629 Wa-----yeP~kRPrftei~~~lsdv~qee  653 (974)
T KOG4257|consen  629 WA-----YEPSKRPRFTEIKAILSDVLQEE  653 (974)
T ss_pred             hc-----cCcccCCcHHHHHHHHHHHHHHh
Confidence            99     99999999999999998887643

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=3.7e-32  Score=240.74  Aligned_cols=229  Identities=18%  Similarity=0.248  Sum_probs=174.0

Q ss_pred             HHhhccccccCCccccceeeecceee----cCCCcEEEEEEeccccch---hHHHHHHH-hhCC-CCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV----SRNLTVVAVKARRYMASQ---TKLEEEIL-LKSS-SHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l-~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||.+.+.+.    ..++..+|+|........   ..+..|+. ++.+ +||||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            56899999999999999999976432    234568999998754322   26667777 8888 899999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      .. .+++|||+++|+|.+++....               ..+++.++..++.|++.||+|||+.   |++||||||+||+
T Consensus        94 ~~-~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil  169 (304)
T cd05101          94 GP-LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVL  169 (304)
T ss_pred             Cc-eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEE
Confidence            54 499999999999999987642               2578889999999999999999654   8999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCC----Ccccc---c-------Ccccc--ccccc--------CCCCc---------cee
Q 046594          195 LDELCNAKLAGFGAANYCSGGSN----RRNCE---K-------TSEMA--EDIND--------FVGGQ---------ECL  241 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~---~-------~~~~s--~DV~S--------~~~~~---------~~~  241 (304)
                      ++.++.+||+|||+++.......    ....+   +       ...++  +||||        +..+.         ++.
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  249 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  249 (304)
T ss_pred             EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            99999999999999986643221    10000   0       12223  99999        11111         111


Q ss_pred             ---ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          242 ---DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       242 ---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                         ....   ....+..++..+.+++.+||.     .+|++|||+.++++.|+++..+..+
T Consensus       250 ~~~~~~~---~~~~~~~~~~~~~~li~~cl~-----~~p~~Rps~~e~l~~l~~~~~~~~~  302 (304)
T cd05101         250 KLLKEGH---RMDKPANCTNELYMMMRDCWH-----AIPSHRPTFKQLVEDLDRILTLTTN  302 (304)
T ss_pred             HHHHcCC---cCCCCCCCCHHHHHHHHHHcc-----cChhhCCCHHHHHHHHHHHHHhhhc
Confidence               1111   122344567889999999999     9999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.9e-33  Score=247.28  Aligned_cols=214  Identities=20%  Similarity=0.188  Sum_probs=161.5

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccc----h--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----Q--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ++.||+|+||.||++........++.+|+|.+.....    .  ..+..|+. ++.++||||+++++++..++ .+|+||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-~~~lv~   79 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-KLYLIL   79 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC-eEEEEE
Confidence            3679999999999998654445689999999875321    1  15566777 99999999999999998874 459999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++|+|.+++...+ .+.+..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  155 (323)
T cd05584          80 EYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT  155 (323)
T ss_pred             eCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence            9999999999998765 788999999999999999999654   899999999999999999999999999875432221


Q ss_pred             --Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHh
Q 046594          218 --RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWC  267 (304)
Q Consensus       218 --~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~c  267 (304)
                        ....++          ....+  +||||              |....  ....... .....++...+..+.+++.+|
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~  234 (323)
T cd05584         156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL-KGKLNLPPYLTPEARDLLKKL  234 (323)
T ss_pred             cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHH
Confidence              111222          11122  99999              11111  1111111 012234555678899999999


Q ss_pred             ccccCCCCCCCCCC-----CHHHHHHH
Q 046594          268 ISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       268 l~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      |+     .||++||     ++.++++|
T Consensus       235 l~-----~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         235 LK-----RNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             cc-----cCHhHcCCCCCCCHHHHhcC
Confidence            99     9999999     78888775

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-32  Score=236.03  Aligned_cols=218  Identities=20%  Similarity=0.172  Sum_probs=169.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.+|+|++|.||++.+.    +++.+|+|.++..... ..+.+|+. +++++||||+++++++...+. ++++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~----~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~lv   79 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN----NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEP-IYIV   79 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec----CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCC-eeee
Confidence            457899999999999999998764    3478999998765433 36777777 999999999999999887754 4999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++.... ..+++..+..++.|++.||.|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  156 (261)
T cd05068          80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED  156 (261)
T ss_pred             eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence            99999999999997654 3689999999999999999999654   8999999999999999999999999999876533


Q ss_pred             CCCcccc------c-------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHHHH
Q 046594          216 SNRRNCE------K-------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~~~~~~------~-------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ......+      +       ....+  +||||        ...++            ..++...   ....+...+..+
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  233 (261)
T cd05068         157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY---RMPCPPGCPKEL  233 (261)
T ss_pred             cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCcCCHHH
Confidence            2211000      0       12223  89999        11011            1111111   123345567889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      .+++.+||+     .+|++||++.++.+.|+.
T Consensus       234 ~~li~~~l~-----~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         234 YDIMLDCWK-----EDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHHhh-----cCcccCCCHHHHHHHHhc
Confidence            999999999     999999999999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-32  Score=239.53  Aligned_cols=224  Identities=18%  Similarity=0.225  Sum_probs=165.8

Q ss_pred             HHhhccccccCCccccceeeecceeec-----------CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCccccee
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS-----------RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLL  123 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-----------~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~  123 (304)
                      .++|++.+.||+|+||.||++.+.+..           .....||+|..+......   .+.+|+. +++++|+|+++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            468999999999999999998765321           112458999987653332   6777888 9999999999999


Q ss_pred             eeeeCCCCceEEEEeecCCCChhhHhhhcC-----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCC
Q 046594          124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKG-----------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN  192 (304)
Q Consensus       124 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~N  192 (304)
                      +++...+. +++||||+++++|.+++....           ..+++..++.++.|++.||+|||+.   +++||||||+|
T Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N  159 (295)
T cd05097          84 GVCVSDDP-LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN  159 (295)
T ss_pred             EEEcCCCc-cEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence            99987754 499999999999999986532           1368899999999999999999654   89999999999


Q ss_pred             eeeCCCCCeeEcccccccccCCCCC---Cc----cc-------ccCcccc--cccccCC-------------CCc-----
Q 046594          193 ILLDELCNAKLAGFGAANYCSGGSN---RR----NC-------EKTSEMA--EDINDFV-------------GGQ-----  238 (304)
Q Consensus       193 ill~~~~~~kl~Dfgla~~~~~~~~---~~----~~-------~~~~~~s--~DV~S~~-------------~~~-----  238 (304)
                      |+++.++.+||+|||++........   ..    ..       ...+.++  +||||+.             +..     
T Consensus       160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~  239 (295)
T cd05097         160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE  239 (295)
T ss_pred             EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence            9999999999999999976533221   00    00       0012233  9999911             000     


Q ss_pred             cee-------ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          239 ECL-------DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       239 ~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      +.+       +..........+...+..+.+++.+||+     .||++|||+++|++.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~-----~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         240 QVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWS-----RDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcC-----CCchhCcCHHHHHHHHh
Confidence            100       0000000112233456789999999999     99999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=9.2e-33  Score=247.37  Aligned_cols=210  Identities=17%  Similarity=0.193  Sum_probs=159.7

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEee
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~  139 (304)
                      +.||+|+||.||++.++   .+++.+|+|++......     ..+.+|+. ++.++||||+++++++...+ .+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~lv~Ey   76 (328)
T cd05593           1 KLLGKGTFGKVILVREK---ASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD-RLCFVMEY   76 (328)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-EEEEEEeC
Confidence            46899999999999876   35789999999754211     15556666 99999999999999998874 45999999


Q ss_pred             cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--
Q 046594          140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--  217 (304)
Q Consensus       140 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--  217 (304)
                      +++|+|.+.+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......  
T Consensus        77 ~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~  152 (328)
T cd05593          77 VNGGELFFHLSRER-VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATM  152 (328)
T ss_pred             CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccc
Confidence            99999999887765 799999999999999999999654   899999999999999999999999999876432211  


Q ss_pred             Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhcc
Q 046594          218 RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCIS  269 (304)
Q Consensus       218 ~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~  269 (304)
                      ....++          ...++  +||||              |....  +...... .....++...+..+.+++.+||.
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~li~~~L~  231 (328)
T cd05593         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEDIKFPRTLSADAKSLLSGLLI  231 (328)
T ss_pred             ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc-cCCccCCCCCCHHHHHHHHHHcC
Confidence            111222          12222  89999              11111  1111111 11223455667889999999999


Q ss_pred             ccCCCCCCCCCC-----CHHHHHHH
Q 046594          270 CCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       270 ~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                           .||++||     ++.++++|
T Consensus       232 -----~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         232 -----KDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             -----CCHHHcCCCCCCCHHHHhcC
Confidence                 9999997     89999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=2.8e-32  Score=235.85  Aligned_cols=221  Identities=20%  Similarity=0.192  Sum_probs=171.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..|++.+.+|.|+||.||++.+..    +..+++|.+......  ..+..|+. ++.++|+||+++++++...+. .+++
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~----~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~lv   80 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN----RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP-VYII   80 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC----CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCC-eEEE
Confidence            468999999999999999988753    688999999866542  37777888 999999999999999988754 4999


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++....+ .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~  157 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKED  157 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence            999999999999986533 789999999999999999999654   8999999999999999999999999999766433


Q ss_pred             CC--Cccccc----------Ccccc--cccccCC--------CCc---------ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDINDFV--------GGQ---------ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S~~--------~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ..  ....+.          ....+  +||||++        .+.         +..+..........+..++..+.+++
T Consensus       158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  237 (261)
T cd05148         158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIM  237 (261)
T ss_pred             cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHH
Confidence            22  100000          12222  8999911        111         11111110002234456678899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+||+     .||.+|||+.++++.|+.+
T Consensus       238 ~~~l~-----~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         238 LECWA-----AEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHcC-----CCchhCcCHHHHHHHHhcC
Confidence            99999     9999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-34  Score=249.07  Aligned_cols=213  Identities=20%  Similarity=0.186  Sum_probs=175.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .|+.++.||+|.||.||++.+..   .++.||+|++..+...+   .+++|+. |.+++++||.++||.+..+ ..+|++
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~---t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g-~~Lwii   89 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNK---TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG-TKLWII   89 (467)
T ss_pred             ccccchhccccccceeeeeeecc---ccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec-ccHHHH
Confidence            57788999999999999999874   46899999998776554   7778888 9999999999999999988 556999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||||.||++.+.++..+ .+++....-++++++.||.|||..   +.+|||||+.|||+..+|.+||+|||.+.......
T Consensus        90 Mey~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~  165 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV  165 (467)
T ss_pred             HHHhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence            99999999999998876 568888899999999999999654   89999999999999999999999999999887665


Q ss_pred             C--CcccccCccc-----------c-ccccc-----------CCCCc--------ceeccccCCCCCCcchHHHHHHHHH
Q 046594          217 N--RRNCEKTSEM-----------A-EDIND-----------FVGGQ--------ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       217 ~--~~~~~~~~~~-----------s-~DV~S-----------~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .  .+..|++..|           . +||||           .|+..        -++.++.   +..+....++.+.++
T Consensus       166 ~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~---PP~L~~~~S~~~kEF  242 (467)
T KOG0201|consen  166 KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSA---PPRLDGDFSPPFKEF  242 (467)
T ss_pred             hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCC---CCccccccCHHHHHH
Confidence            5  4455552222           2 99999           22222        1222222   334445778889999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..||+     +||+.|||+.++++|
T Consensus       243 V~~CL~-----k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  243 VEACLD-----KNPEFRPSAKELLKH  263 (467)
T ss_pred             HHHHhh-----cCcccCcCHHHHhhh
Confidence            999999     999999999999975

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.1e-32  Score=237.59  Aligned_cols=219  Identities=19%  Similarity=0.179  Sum_probs=165.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+|++.+.+|+|+||.||++..+   .+++.+|+|+........  .+++|+. +++++||||+++++++...+ .+++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~---~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~-~~~i   83 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNL---HTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE-KLWI   83 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEEC---CCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-EEEE
Confidence            457999999999999999998875   357899999997554332  5667777 99999999999999998774 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++++|.+++...+ ++++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd06646          84 CMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT  159 (267)
T ss_pred             EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence            999999999999987665 789999999999999999999654   8999999999999999999999999998765432


Q ss_pred             CC--Cccccc-------------Ccccc--ccccc-----------CCCCc---------ceeccccCCCCCCcchHHHH
Q 046594          216 SN--RRNCEK-------------TSEMA--EDIND-----------FVGGQ---------ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       216 ~~--~~~~~~-------------~~~~s--~DV~S-----------~~~~~---------~~~~~~~~~~~~~~~~~~~~  258 (304)
                      ..  ....+.             ....+  +||||           ..+..         ......+..+........+.
T Consensus       160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06646         160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSS  239 (267)
T ss_pred             ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCH
Confidence            21  111111             11122  89999           11110         01111110001111223457


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      .+.+++.+||.     .||++|||+++++++|
T Consensus       240 ~~~~li~~~l~-----~~P~~Rp~~~~il~~l  266 (267)
T cd06646         240 TFHNFVKISLT-----KNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHHHHhh-----CChhhCcCHHHHhcCC
Confidence            89999999999     9999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=7.2e-33  Score=248.34  Aligned_cols=219  Identities=16%  Similarity=0.110  Sum_probs=163.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc------hhHHHHHHH-hhCC-CCCcccceeeeeeCCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS------QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~  132 (304)
                      .|++.+.||+|+||.||++........+..+|+|++.....      ...+..|.. ++.+ +|+||+++++++... ..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~   79 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE-AK   79 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC-CE
Confidence            47889999999999999988755445689999999874321      114556666 8888 589999999998877 44


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        80 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614          80 LHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            599999999999999998765 799999999999999999999654   8999999999999999999999999999865


Q ss_pred             CCCCC---Cccccc-----------Ccccc--cccccCCC-------Cc------------ceeccccCCCCCCcchHHH
Q 046594          213 SGGSN---RRNCEK-----------TSEMA--EDINDFVG-------GQ------------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       213 ~~~~~---~~~~~~-----------~~~~s--~DV~S~~~-------~~------------~~~~~~~~~~~~~~~~~~~  257 (304)
                      .....   ....++           ....+  +||||++.       +.            ..+...+......++...+
T Consensus       156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (332)
T cd05614         156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIG  235 (332)
T ss_pred             cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCC
Confidence            33221   111222           11122  89999110       00            0011111001223444566


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      ..+.+++.+||+     .||++||     ++.++++|
T Consensus       236 ~~~~~li~~~l~-----~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         236 PEAQDLLHKLLR-----KDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             HHHHHHHHHHcC-----CCHHHcCCCCCCCHHHHHcC
Confidence            788999999999     9999999     77788875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=3.3e-32  Score=240.18  Aligned_cols=225  Identities=18%  Similarity=0.213  Sum_probs=167.3

Q ss_pred             HHhhccccccCCccccceeeecceee-------------cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV-------------SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVT  121 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~-------------~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~  121 (304)
                      .++|++.+.||+|+||.||++.+...             ..+...+|+|.........   .+.+|+. ++.++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            46799999999999999999865421             1234579999998653322   6777888 99999999999


Q ss_pred             eeeeeeCCCCceEEEEeecCCCChhhHhhhcCC----------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 046594          122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGG----------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD  191 (304)
Q Consensus       122 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~  191 (304)
                      +++++...+.. +++|||+++|+|.+++.....          .+++.++..++.|++.||+|||+.   +++||||||+
T Consensus        84 ~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~  159 (296)
T cd05095          84 LLAVCITSDPL-CMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR  159 (296)
T ss_pred             EEEEEecCCcc-EEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence            99999887555 999999999999999876431          467889999999999999999764   8999999999


Q ss_pred             CeeeCCCCCeeEcccccccccCCCCC---Cc-----cccc------Ccccc--cccccCC-------------CCc----
Q 046594          192 NILLDELCNAKLAGFGAANYCSGGSN---RR-----NCEK------TSEMA--EDINDFV-------------GGQ----  238 (304)
Q Consensus       192 Nill~~~~~~kl~Dfgla~~~~~~~~---~~-----~~~~------~~~~s--~DV~S~~-------------~~~----  238 (304)
                      |||++.++.++|+|||+++.......   ..     ....      .+.++  +||||++             +..    
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~  239 (296)
T cd05095         160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD  239 (296)
T ss_pred             eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence            99999999999999999986533221   00     0000      22333  9999911             010    


Q ss_pred             -ceec-------cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          239 -ECLD-------QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       239 -~~~~-------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                       +.+.       ..........+..++..+.+++.+||+     .||.+|||+.++++.|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~-----~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         240 EQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWR-----RNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcC-----CCcccCCCHHHHHHHHhC
Confidence             1000       000000112234456889999999999     999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=9.1e-33  Score=248.52  Aligned_cols=218  Identities=18%  Similarity=0.127  Sum_probs=165.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ...|++.+.||+|+||.||++.++..  ++..+|+|.+.....     ...+.+|+. ++.++||||+++++++.+. ..
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-~~  105 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNE--DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE-SY  105 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECC--CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-CE
Confidence            45799999999999999999987532  346899999864321     125566777 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++..
T Consensus       106 ~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~  181 (340)
T PTZ00426        106 LYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVV  181 (340)
T ss_pred             EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence            599999999999999998766 799999999999999999999654   8999999999999999999999999999876


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc-ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ-ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ..... ...++          ....+  +||||              |.... ......+......++...+..+.+++.
T Consensus       182 ~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~  260 (340)
T PTZ00426        182 DTRTY-TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMK  260 (340)
T ss_pred             CCCcc-eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            43221 11222          11122  89999              11111 000011100112345555677899999


Q ss_pred             HhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          266 WCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      +||+     .||++|+     ++.++++|
T Consensus       261 ~~l~-----~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        261 KLLS-----HDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHcc-----cCHHHcCCCCCCCHHHHHcC
Confidence            9999     9999995     89999886

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.9e-32  Score=234.63  Aligned_cols=215  Identities=25%  Similarity=0.246  Sum_probs=166.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+|++.+.+|+|+||.||++.++    .+..+|+|.+...... ..+.+|+. ++.++||||+++++++...+. .++||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~lv~   78 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR----GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRP-IFIVT   78 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec----CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc-eEEEE
Confidence            46889999999999999998764    3468999998754433 36666777 999999999999999887754 49999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||+++.......
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~  155 (256)
T cd05059          79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY  155 (256)
T ss_pred             ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence            99999999999987655789999999999999999999654   899999999999999999999999999986643222


Q ss_pred             C---cccc---c-------Ccccc--cccccC--------CCCc---------ce---eccccCCCCCCcchHHHHHHHH
Q 046594          218 R---RNCE---K-------TSEMA--EDINDF--------VGGQ---------EC---LDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       218 ~---~~~~---~-------~~~~s--~DV~S~--------~~~~---------~~---~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .   ...+   +       ...++  +||||+        ..+.         +.   +....   ....+...+..+.+
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  232 (256)
T cd05059         156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY---RLYRPKLAPTEVYT  232 (256)
T ss_pred             cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC---cCCCCCCCCHHHHH
Confidence            1   1100   0       12223  999991        1011         11   11111   22334456788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      ++.+||.     .+|++|||+.++++.|
T Consensus       233 li~~cl~-----~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         233 IMYSCWH-----EKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHhc-----CChhhCcCHHHHHHHh
Confidence            9999999     9999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=5.8e-33  Score=248.14  Aligned_cols=210  Identities=17%  Similarity=0.191  Sum_probs=159.3

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEee
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~  139 (304)
                      +.||+|+||.||++.++   .+|..||+|.+......     ..+.+|.. ++.++||||+++++++...+ .+|+||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~E~   76 (323)
T cd05595           1 KLLGKGTFGKVILVREK---ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-RLCFVMEY   76 (323)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-EEEEEEeC
Confidence            46899999999999876   35799999999754221     14556667 99999999999999998874 55999999


Q ss_pred             cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--
Q 046594          140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--  217 (304)
Q Consensus       140 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--  217 (304)
                      +++|+|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++.......  
T Consensus        77 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  152 (323)
T cd05595          77 ANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM  152 (323)
T ss_pred             CCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcc
Confidence            99999999887765 799999999999999999999654   899999999999999999999999999875422211  


Q ss_pred             Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhcc
Q 046594          218 RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCIS  269 (304)
Q Consensus       218 ~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~  269 (304)
                      ....++          ...++  +||||              |....  ....... .....++...+..+.+++.+||+
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~li~~~L~  231 (323)
T cd05595         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-MEEIRFPRTLSPEAKSLLAGLLK  231 (323)
T ss_pred             ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHcc
Confidence            111122          22223  89999              11111  1111111 01223455667889999999999


Q ss_pred             ccCCCCCCCCCC-----CHHHHHHH
Q 046594          270 CCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       270 ~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                           .||.+||     ++.++++|
T Consensus       232 -----~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         232 -----KDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             -----CCHHHhCCCCCCCHHHHHcC
Confidence                 9999998     89998875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=3.7e-32  Score=235.25  Aligned_cols=222  Identities=18%  Similarity=0.192  Sum_probs=163.6

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++.......+...+|+|........   ..+.+|.. ++.++||||+++++++...++..++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            4689999999999887544345578999998643322   26666777 9999999999999988755555599999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC----
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN----  217 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----  217 (304)
                      +|+|.+++......+++.....++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++.......    
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence            9999999987655678888899999999999999654   899999999999999999999999999975532211    


Q ss_pred             -----Ccc--ccc-----Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          218 -----RRN--CEK-----TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       218 -----~~~--~~~-----~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                           ...  ...     ....+  +||||        ...+.         +.............+...+..+.+++.+
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  237 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLS  237 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHH
Confidence                 000  000     12222  99999        11111         0000000000112233446789999999


Q ss_pred             hccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          267 CISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       267 cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ||.     .+|++||++.++++.|+++..
T Consensus       238 cl~-----~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         238 CWH-----PKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HcC-----CChhhCCCHHHHHHHHHHHhc
Confidence            999     999999999999999998753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-32  Score=245.22  Aligned_cols=208  Identities=18%  Similarity=0.158  Sum_probs=156.9

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccc---h--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---Q--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      ||+|+||.||++.+.   .+++.+|+|.+.....   .  ..+..|.. +++++||||+++++++...+ .+++||||++
T Consensus         1 lg~G~~g~Vy~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~   76 (312)
T cd05585           1 IGKGSFGKVMQVRKR---DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE-KLYLVLAFIN   76 (312)
T ss_pred             CCcCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC-eEEEEEcCCC
Confidence            699999999999876   3578999999875321   1  14556666 99999999999999998774 5599999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Cc
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RR  219 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~  219 (304)
                      +|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.++|+|||+++.......  ..
T Consensus        77 ~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  152 (312)
T cd05585          77 GGELFHHLQREG-RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNT  152 (312)
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccc
Confidence            999999998765 799999999999999999999654   899999999999999999999999999986432221  11


Q ss_pred             cccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhcccc
Q 046594          220 NCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCC  271 (304)
Q Consensus       220 ~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~  271 (304)
                      ..++          ...++  +||||              |....  +...... .....++...+..+.+++.+||+  
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~--  229 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL-QEPLRFPDGFDRDAKDLLIGLLS--  229 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH-cCCCCCCCcCCHHHHHHHHHHcC--
Confidence            1222          11223  89999              11111  1111111 11224455667889999999999  


Q ss_pred             CCCCCCCCCCC---HHHHHHH
Q 046594          272 SNIEGNENHPK---IVDVLSG  289 (304)
Q Consensus       272 ~~~~dp~~Rps---~~~vl~~  289 (304)
                         .||.+||+   +.++++|
T Consensus       230 ---~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         230 ---RDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             ---CCHHHcCCCCCHHHHHcC
Confidence               99999985   6777665

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.3e-32  Score=236.70  Aligned_cols=224  Identities=19%  Similarity=0.199  Sum_probs=166.9

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCC-----
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-----  131 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~-----  131 (304)
                      |++.+.+|+|+||.||.+........+..+|+|.++.....    ..+..|+. ++.++||||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            56788999999999999876533223578999998754322    15667777 999999999999998866533     


Q ss_pred             ceEEEEeecCCCChhhHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG-----GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      ..++++||+++|+|.+++....     ..+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence            3589999999999999885431     2689999999999999999999654   8999999999999999999999999


Q ss_pred             ccccccCCCCC--Cc-----cc-------ccCcccc--cccccCC--------CCc---------ceeccccCCCCCCcc
Q 046594          207 GAANYCSGGSN--RR-----NC-------EKTSEMA--EDINDFV--------GGQ---------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       207 gla~~~~~~~~--~~-----~~-------~~~~~~s--~DV~S~~--------~~~---------~~~~~~~~~~~~~~~  253 (304)
                      |+++.......  ..     ..       ......+  +||||++        .+.         ++.+..........+
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  237 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQP  237 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            99986643321  00     00       0012222  9999911        011         111111100122345


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ..++..+.+++.+||+     .||.+|||+.+++++|+++
T Consensus       238 ~~~~~~~~~li~~~l~-----~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         238 EDCLDELYDLMYSCWR-----ADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             cCCCHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHhh
Confidence            5667889999999999     9999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.1e-32  Score=245.84  Aligned_cols=210  Identities=18%  Similarity=0.124  Sum_probs=157.6

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEee
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~  139 (304)
                      ++.||+|+||.||++........|+.+|+|++......    ..+..|+. +++++||||+++++++...+ .+|+||||
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~   79 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG-KLYLILDF   79 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-EEEEEEcC
Confidence            36799999999999876433346899999999754322    14556666 99999999999999998874 55999999


Q ss_pred             cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--
Q 046594          140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--  217 (304)
Q Consensus       140 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--  217 (304)
                      +++|+|.+++.... .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++........  
T Consensus        80 ~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~  155 (318)
T cd05582          80 LRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA  155 (318)
T ss_pred             CCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce
Confidence            99999999997665 799999999999999999999764   899999999999999999999999999986544322  


Q ss_pred             Cccccc----------Ccccc--cccccCCC-------Cc---------ceeccccCCCCCCcchHHHHHHHHHHHHhcc
Q 046594          218 RRNCEK----------TSEMA--EDINDFVG-------GQ---------ECLDQRLYIPNEKFKITSLAKLGDIEKWCIS  269 (304)
Q Consensus       218 ~~~~~~----------~~~~s--~DV~S~~~-------~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~  269 (304)
                      ....++          ....+  +||||++.       +.         +...... .....++...+..+.+++.+||+
T Consensus       156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~li~~~l~  234 (318)
T cd05582         156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL-KAKLGMPQFLSPEAQSLLRALFK  234 (318)
T ss_pred             ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhh
Confidence            112222          11122  99999211       10         1111110 01123445567789999999999


Q ss_pred             ccCCCCCCCCCCCHHH
Q 046594          270 CCSNIEGNENHPKIVD  285 (304)
Q Consensus       270 ~~~~~~dp~~Rps~~~  285 (304)
                           .||++||++.+
T Consensus       235 -----~~P~~R~~a~~  245 (318)
T cd05582         235 -----RNPANRLGAGP  245 (318)
T ss_pred             -----cCHhHcCCCCC
Confidence                 99999999443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.6e-32  Score=245.52  Aligned_cols=211  Identities=15%  Similarity=0.168  Sum_probs=158.9

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEee
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~  139 (304)
                      +.||+|+||.||++.++   .++..+|+|.+......     ..+..|.. ++.++||||+++++++...+ .+++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~-~~~lv~E~   76 (325)
T cd05594           1 KLLGKGTFGKVILVKEK---ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-RLCFVMEY   76 (325)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC-EEEEEEeC
Confidence            46899999999999876   35789999999754221     14455666 88999999999999988874 55999999


Q ss_pred             cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--
Q 046594          140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--  217 (304)
Q Consensus       140 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--  217 (304)
                      +++|+|.+++.... .+++..+..++.|++.||+|||+.  .+|+||||||+|||++.++.+||+|||+++.......  
T Consensus        77 ~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  153 (325)
T cd05594          77 ANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM  153 (325)
T ss_pred             CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence            99999999887765 799999999999999999999742  4899999999999999999999999999875432211  


Q ss_pred             Cccccc----------Ccccc--cccccCC--------------CCc--ceeccccCCCCCCcchHHHHHHHHHHHHhcc
Q 046594          218 RRNCEK----------TSEMA--EDINDFV--------------GGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCIS  269 (304)
Q Consensus       218 ~~~~~~----------~~~~s--~DV~S~~--------------~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~  269 (304)
                      ....++          ...++  +||||++              ...  ....... .....++...+..+.+++.+||+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~li~~~L~  232 (325)
T cd05594         154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEEIRFPRTLSPEAKSLLSGLLK  232 (325)
T ss_pred             ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHhh
Confidence            111222          22223  9999911              110  1111000 01123455567889999999999


Q ss_pred             ccCCCCCCCCCC-----CHHHHHHH
Q 046594          270 CCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       270 ~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                           .||++|+     ++.++++|
T Consensus       233 -----~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         233 -----KDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             -----cCHHHhCCCCCCCHHHHhcC
Confidence                 9999996     89999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=7.8e-32  Score=234.08  Aligned_cols=222  Identities=17%  Similarity=0.222  Sum_probs=171.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|+..+.+|+|+||.||++..+........+++|.........   .+..|+. +++++|+|++++.+++...+.. ++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~l   83 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA-MI   83 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc-EE
Confidence            46888999999999999999876443344589999987653322   5667777 9999999999999999887555 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++++|.+++....+.+++.++..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  160 (268)
T cd05063          84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD  160 (268)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence            9999999999999987655799999999999999999999654   8999999999999999999999999999766432


Q ss_pred             CC--Cc-cc-----cc-------Ccccc--ccccc--------CCCCc---------c---eeccccCCCCCCcchHHHH
Q 046594          216 SN--RR-NC-----EK-------TSEMA--EDIND--------FVGGQ---------E---CLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       216 ~~--~~-~~-----~~-------~~~~s--~DV~S--------~~~~~---------~---~~~~~~~~~~~~~~~~~~~  258 (304)
                      ..  .. ..     .+       ...++  +||||        ...+.         +   .+....   ....+.+.+.
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~~~  237 (268)
T cd05063         161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF---RLPAPMDCPS  237 (268)
T ss_pred             cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC---CCCCCCCCCH
Confidence            22  00 00     00       12222  89999        11011         0   111111   1223345667


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+.+++.+||.     .+|++||++.++++.|+++
T Consensus       238 ~~~~li~~c~~-----~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         238 AVYQLMLQCWQ-----QDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHHHcC-----CCcccCcCHHHHHHHHHhh
Confidence            89999999999     9999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.3e-32  Score=241.95  Aligned_cols=145  Identities=23%  Similarity=0.245  Sum_probs=125.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.++   .+++.+|+|++.......   .+.+|+. ++.++||||+++++++.+.. ..++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~l   80 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSK---VNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE-TLTL   80 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEEC---CCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-eEEE
Confidence            57999999999999999999886   357899999987543322   4556676 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ||||++ ++|.+++....+.+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  153 (303)
T cd07869          81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAK  153 (303)
T ss_pred             EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence            999996 588888877655799999999999999999999654   8999999999999999999999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-32  Score=245.64  Aligned_cols=212  Identities=18%  Similarity=0.163  Sum_probs=181.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      -|.+.+.||+|.|..|-++++-   ..|+.||||++.....++    .+.+|+. |+.++|||||++|++.... ..+||
T Consensus        19 LYDLekTlG~GHFAVVKLArHV---FTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ-TKlyL   94 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHV---FTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ-TKLYL   94 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhh---cccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc-ceEEE
Confidence            4788899999999999999885   468999999999877665    6667777 9999999999999998777 66799


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfgla~~~~~  214 (304)
                      |+|.-.+|+|++++-++...+.+..+.+|+.||+.|+.|+|+.|   ++||||||+|+.+- .-|.+||+|||++..+.+
T Consensus        95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P  171 (864)
T KOG4717|consen   95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP  171 (864)
T ss_pred             EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence            99999999999999888878999999999999999999999987   99999999999875 568999999999999888


Q ss_pred             CCC-Cccccc----------Ccccc---ccccc-----------CCCCc---------ceeccccCCCCCCcchHHHHHH
Q 046594          215 GSN-RRNCEK----------TSEMA---EDIND-----------FVGGQ---------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       215 ~~~-~~~~~~----------~~~~s---~DV~S-----------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      +.. .+.+|.          +..|.   .||||           .++.+         .++|-..     ..|...+.++
T Consensus       172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY-----tvPshvS~eC  246 (864)
T KOG4717|consen  172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY-----TVPSHVSKEC  246 (864)
T ss_pred             cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc-----cCchhhhHHH
Confidence            877 666666          22222   89999           33333         4555554     5678889999


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||..||.     .||.+|.|.++|..+
T Consensus       247 rdLI~sMLv-----RdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  247 RDLIQSMLV-----RDPKKRASLEEIVST  270 (864)
T ss_pred             HHHHHHHHh-----cCchhhccHHHHhcc
Confidence            999999999     999999999998764

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=7.4e-32  Score=237.17  Aligned_cols=223  Identities=21%  Similarity=0.243  Sum_probs=168.7

Q ss_pred             hhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.+|+|+||.||++......  .....+++|.........   .+..|+. ++.++||||+++++.+...+.. +
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~   79 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL-L   79 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc-E
Confidence            4788899999999999998764321  234679999887654332   6667777 9999999999999999887555 9


Q ss_pred             EEEeecCCCChhhHhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 046594          135 LVFEFMQRGSLRWNLREKG-----------------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD  191 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~  191 (304)
                      +++||+++|+|.+++....                       ..+++..++.++.|++.||+|||+.   +++||||||+
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~  156 (290)
T cd05045          80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR  156 (290)
T ss_pred             EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence            9999999999999886421                       1578999999999999999999754   8999999999


Q ss_pred             CeeeCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--cccccCC--------CCc---------
Q 046594          192 NILLDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDINDFV--------GGQ---------  238 (304)
Q Consensus       192 Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S~~--------~~~---------  238 (304)
                      |||+++++.++|+|||+++.......    ....+.          ....+  +||||++        .+.         
T Consensus       157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  236 (290)
T cd05045         157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE  236 (290)
T ss_pred             eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence            99999999999999999976532211    000100          12223  8999911        011         


Q ss_pred             ---ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          239 ---ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       239 ---~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                         +......   ....+...+..+.+++.+||+     .+|++||++.++++.|+++..
T Consensus       237 ~~~~~~~~~~---~~~~~~~~~~~~~~~i~~cl~-----~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         237 RLFNLLKTGY---RMERPENCSEEMYNLMLTCWK-----QEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HHHHHHhCCC---CCCCCCCCCHHHHHHHHHHcc-----CCcccCCCHHHHHHHHHHHHh
Confidence               1111112   223345566789999999999     999999999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2.4e-32  Score=239.22  Aligned_cols=225  Identities=17%  Similarity=0.182  Sum_probs=169.5

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++...++  ...+..+|+|+++......   .+.+|.. ++.++||||+++++++...+. 
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~-   82 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP-   82 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc-
Confidence            34688999999999999999876543  1345789999998654432   5677777 899999999999999988755 


Q ss_pred             eEEEEeecCCCChhhHhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC
Q 046594          133 RCLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE  197 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~  197 (304)
                      .++++||+++++|.+++...               ...+++..+..++.|++.||+|||+.   +++||||||+||+++.
T Consensus        83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~  159 (283)
T cd05091          83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFD  159 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecC
Confidence            49999999999999998532               12588899999999999999999654   8999999999999999


Q ss_pred             CCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC----CCc-----ceeccc
Q 046594          198 LCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV----GGQ-----ECLDQR  244 (304)
Q Consensus       198 ~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~----~~~-----~~~~~~  244 (304)
                      ++.+||+|||+++.......    ....++          .+..+  +||||        +.    ...     ++.+..
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i  239 (283)
T cd05091         160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI  239 (283)
T ss_pred             CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999999999876543221    000000          12223  89999        11    100     111111


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          245 LYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       245 ~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      ........+.+++..+.+++.+||+     .+|++||++.+++..|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~-----~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         240 RNRQVLPCPDDCPAWVYTLMLECWN-----EFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HcCCcCCCCCCCCHHHHHHHHHHhC-----CCcccCCCHHHHHHHhhC
Confidence            1001233456677889999999999     999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-33  Score=252.01  Aligned_cols=215  Identities=21%  Similarity=0.174  Sum_probs=174.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      +.|.-++.||.|.||.||.+++.   .+.++||||++.....+.     ++..|+. |++++|||++.+-|||...... 
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~---~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~Ta-  101 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDV---RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTA-  101 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeecc---CccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchH-
Confidence            35778899999999999999986   456999999998776554     6667777 9999999999999999888666 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |||||||- |+-.|++.-..+++.+..+..|..+.+.||+|||++   +.||||||..|||+++.|.+||+|||.|....
T Consensus       102 WLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~  177 (948)
T KOG0577|consen  102 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMA  177 (948)
T ss_pred             HHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcC
Confidence            99999995 599999988888999999999999999999999875   79999999999999999999999999998876


Q ss_pred             CCCC-Cccccc----------Ccccc--ccccc-----------CCCCc--c------eeccccCCCCCC-cchHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDIND-----------FVGGQ--E------CLDQRLYIPNEK-FKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S-----------~~~~~--~------~~~~~~~~~~~~-~~~~~~~~l  260 (304)
                      +..+ .++...          .|.|.  +||||           .|+.-  .      .+..+-   .+. ...+.+..+
T Consensus       178 PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe---sPtLqs~eWS~~F  254 (948)
T KOG0577|consen  178 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE---SPTLQSNEWSDYF  254 (948)
T ss_pred             chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC---CCCCCCchhHHHH
Confidence            6555 222222          66666  99999           22211  0      011111   111 234567889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      ..++..||+     +-|.+|||..+++.|-
T Consensus       255 ~~Fvd~CLq-----KipqeRptse~ll~H~  279 (948)
T KOG0577|consen  255 RNFVDSCLQ-----KIPQERPTSEELLKHR  279 (948)
T ss_pred             HHHHHHHHh-----hCcccCCcHHHHhhcc
Confidence            999999999     9999999999999864

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=5.5e-32  Score=238.17  Aligned_cols=231  Identities=20%  Similarity=0.240  Sum_probs=173.7

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+.|.+.+.||+|+||.||++.+...  ..++..+++|.+.......  .+.+|+. +++++|+||+++++++...+.. 
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-   82 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL-   82 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce-
Confidence            45788999999999999999875432  2345679999987655443  6777877 9999999999999999887554 


Q ss_pred             EEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC
Q 046594          134 CLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL  198 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~  198 (304)
                      ++||||+++++|.+++....               ..+++..++.++.|++.||+|||+   ++++||||||+|||++.+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~  159 (291)
T cd05094          83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGAN  159 (291)
T ss_pred             EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccC
Confidence            99999999999999997643               248999999999999999999965   489999999999999999


Q ss_pred             CCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CCCCc---------ceecccc
Q 046594          199 CNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ---------ECLDQRL  245 (304)
Q Consensus       199 ~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~~~~~  245 (304)
                      +.++|+|||++........    ....+.          ...++  +||||        +..+.         +..+...
T Consensus       160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  239 (291)
T cd05094         160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT  239 (291)
T ss_pred             CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence            9999999999976543221    001111          12222  99999        11011         0111000


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          246 YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       246 ~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      .......+..++..+.+++.+||+     .||++|||+.++++.|+++.....
T Consensus       240 ~~~~~~~~~~~~~~~~~li~~~l~-----~~P~~Rpt~~~v~~~l~~~~~~~~  287 (291)
T cd05094         240 QGRVLERPRVCPKEVYDIMLGCWQ-----REPQQRLNIKEIYKILHALGKATP  287 (291)
T ss_pred             CCCCCCCCccCCHHHHHHHHHHcc-----cChhhCcCHHHHHHHHHHHHhhcC
Confidence            000122334456789999999999     999999999999999999976543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=4e-32  Score=248.93  Aligned_cols=224  Identities=19%  Similarity=0.222  Sum_probs=168.2

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCCC-CCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSS-HLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~-h~niv~~~~~~~~~~~  131 (304)
                      ..+|.+.+.||+|+||.||++.+++.  ...+..||+|+++......   .+..|+. +.++. ||||+++++++...+.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            35678889999999999999987542  2345789999998653332   5666777 88897 9999999999988754


Q ss_pred             ceEEEEeecCCCChhhHhhhcC----------------------------------------------------------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG----------------------------------------------------------  153 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------  153 (304)
                       +++||||+++|+|.++++...                                                          
T Consensus       116 -~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (401)
T cd05107         116 -IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD  194 (401)
T ss_pred             -cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence             599999999999999986532                                                          


Q ss_pred             ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          154 ---------------------------------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       154 ---------------------------------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                                                             ..+++.....++.|++.||+|||+   ++++||||||+|||
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiL  271 (401)
T cd05107         195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVL  271 (401)
T ss_pred             chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEE
Confidence                                                   136777889999999999999964   58999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC----CCc--------
Q 046594          195 LDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV----GGQ--------  238 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~----~~~--------  238 (304)
                      ++.++.++|+|||+++.......    ....++          ...++  +||||        +.    +..        
T Consensus       272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~  351 (401)
T cd05107         272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF  351 (401)
T ss_pred             EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence            99999999999999986532211    111111          11222  89999        11    000        


Q ss_pred             -ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          239 -ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       239 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                       ..+....   +...+...+..+.+++.+||.     .+|.+||++.++++.|+++.
T Consensus       352 ~~~~~~~~---~~~~p~~~~~~l~~li~~cl~-----~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         352 YNAIKRGY---RMAKPAHASDEIYEIMQKCWE-----EKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHcCC---CCCCCCCCCHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHHh
Confidence             1111111   123344567889999999999     99999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-33  Score=241.47  Aligned_cols=215  Identities=19%  Similarity=0.154  Sum_probs=163.0

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCC----ceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ----RRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~----~~~l  135 (304)
                      +|+..+.+|.|.||.||.+....+   ++.||||+.-.+....  ..|.. |+++.|||||++.-+|....+    .+.+
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~---~~~vAIKKv~~d~r~k--nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRET---EEEVAIKKVLQDKRYK--NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCC---CceeEEEEecCCCCcC--cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            467788999999999999987644   6899999987654432  24455 889999999999888765422    3468


Q ss_pred             EEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-CCeeEcccccccc
Q 046594          136 VFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-CNAKLAGFGAANY  211 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfgla~~  211 (304)
                      ||||+|. +|.+.++..   +..++...+.-++.|+.+||+|||..   ||+||||||.|+|+|.+ |.+||||||.|+.
T Consensus       100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~  175 (364)
T KOG0658|consen  100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKV  175 (364)
T ss_pred             HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCccee
Confidence            9999998 999999853   33788899999999999999999763   89999999999999965 9999999999998


Q ss_pred             cCCCCC----Cccccc--------Ccccc--ccccc--------------CCCCc-------------------------
Q 046594          212 CSGGSN----RRNCEK--------TSEMA--EDIND--------------FVGGQ-------------------------  238 (304)
Q Consensus       212 ~~~~~~----~~~~~~--------~~~~s--~DV~S--------------~~~~~-------------------------  238 (304)
                      +..++.    ..++.+        ...++  -||||              |++..                         
T Consensus       176 L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~  255 (364)
T KOG0658|consen  176 LVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP  255 (364)
T ss_pred             eccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence            876665    112222        33333  89999              33322                         


Q ss_pred             ---ceeccccCCCC--CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          239 ---ECLDQRLYIPN--EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       239 ---~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                         +.-.+.++...  .-+.....+++.+++.+++.     .+|.+|.++.|++.|
T Consensus       256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~-----Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQ-----YSPSKRLSALEALAH  306 (364)
T ss_pred             ccccccCcccccccceeecccCCCHHHHHHHHHHhc-----cChhhcCCHHHHhcc
Confidence               11112221100  11344567889999999999     999999999999864

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=5.3e-32  Score=233.93  Aligned_cols=212  Identities=18%  Similarity=0.211  Sum_probs=163.0

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      .||+|+||.||++.++.. .++..+|+|+++......    .+.+|+. ++.++||||+++++++... . .++||||++
T Consensus         2 ~lg~G~~g~v~~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~-~~lv~e~~~   78 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMK-KSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE-S-WMLVMELAE   78 (257)
T ss_pred             cCCCcCCcceEEeEEecC-CCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-C-cEEEEecCC
Confidence            689999999999876433 356899999987544322    6667777 9999999999999988543 4 489999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC----
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN----  217 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----  217 (304)
                      +|+|.+++.... .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||+++.......    
T Consensus        79 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  154 (257)
T cd05116          79 LGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA  154 (257)
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence            999999997665 799999999999999999999654   899999999999999999999999999987644322    


Q ss_pred             -Cccc---c--c-----Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          218 -RRNC---E--K-----TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       218 -~~~~---~--~-----~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                       ....   .  .     ....+  +||||        ...+.            +.+....   ....+...+..+.+++
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li  231 (257)
T cd05116         155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE---RMECPQRCPPEMYDLM  231 (257)
T ss_pred             cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC---CCCCCCCCCHHHHHHH
Confidence             0000   0  0     12222  99999        11011            1111222   2345556778899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+||+     .||++||++.+|.+.|++.
T Consensus       232 ~~~~~-----~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         232 KLCWT-----YGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHhc-----cCchhCcCHHHHHHHHhcc
Confidence            99999     9999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=7.5e-32  Score=233.17  Aligned_cols=213  Identities=17%  Similarity=0.196  Sum_probs=163.3

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCC
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR  142 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~  142 (304)
                      .||+|+||.||.+.++.. ..+..+|+|.........   .+.+|+. +++++||||+++++++...  .+++||||+++
T Consensus         2 ~ig~G~~g~v~~~~~~~~-~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~--~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMR-KKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE--ALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcccEEEEEEecC-CCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC--CeEEEEEeCCC
Confidence            489999999999876533 235679999987654332   5777777 9999999999999988543  44999999999


Q ss_pred             CChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---Cc
Q 046594          143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---RR  219 (304)
Q Consensus       143 gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---~~  219 (304)
                      |+|.+++......+++..++.++.|++.||+|||+   .+++||||||+|||++.++.+||+|||++........   ..
T Consensus        79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  155 (257)
T cd05115          79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR  155 (257)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence            99999998665589999999999999999999965   4899999999999999999999999999976543321   00


Q ss_pred             cc------cc------Ccccc--ccccc--------CCCCc---------c---eeccccCCCCCCcchHHHHHHHHHHH
Q 046594          220 NC------EK------TSEMA--EDIND--------FVGGQ---------E---CLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       220 ~~------~~------~~~~s--~DV~S--------~~~~~---------~---~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ..      ..      ...++  +||||        ...+.         +   .+....   +...+..++.++.+++.
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~  232 (257)
T cd05115         156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK---RLDCPAECPPEMYALMK  232 (257)
T ss_pred             CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC---CCCCCCCCCHHHHHHHH
Confidence            00      00      12223  89999        11111         0   111111   23455566789999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      +||.     .||++||++.++.+.|+.+
T Consensus       233 ~c~~-----~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         233 DCWI-----YKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHcC-----CChhhCcCHHHHHHHHhhh
Confidence            9999     9999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.2e-32  Score=258.47  Aligned_cols=218  Identities=18%  Similarity=0.183  Sum_probs=164.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .|++.+.+|+|+||.||.+.....  .+..||+|.+.......  .+++|+. ++.++||||+++++++...+ .+|+||
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~--~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-~~~lv~  144 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSD--PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD-KLLLIM  144 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCC--CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC-EEEEEE
Confidence            489999999999999999976432  25788888875544333  6677777 99999999999999998874 559999


Q ss_pred             eecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          138 EFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       138 e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||+++|+|.+++...   ..++++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence            999999999887643   2268999999999999999999965   4899999999999999999999999999987644


Q ss_pred             CCC----Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          215 GSN----RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       215 ~~~----~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ...    ....++          ...++  +||||              |....  +++...+......++...+..+.+
T Consensus       222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  301 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKA  301 (478)
T ss_pred             ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHH
Confidence            321    112222          12223  89999              11111  112221100012344456688999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||.     .||++||++.+++++
T Consensus       302 li~~~L~-----~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        302 LLDPLLS-----KNPALRPTTQQLLHT  323 (478)
T ss_pred             HHHHHhc-----cChhhCcCHHHHHhC
Confidence            9999999     999999999999764

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=7e-32  Score=238.98  Aligned_cols=230  Identities=19%  Similarity=0.176  Sum_probs=167.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~  133 (304)
                      +..|++.+.||+|+||.||++.++... ....+++|.........   .+.+|+. +.++ +|+||+++++++...+.. 
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~-   83 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL-   83 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCC-ceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc-
Confidence            457899999999999999999875321 11356888776433222   6667777 8888 899999999999887554 


Q ss_pred             EEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC
Q 046594          134 CLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL  198 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~  198 (304)
                      ++||||+++|+|.+++....               ..+++.+++.++.|++.||+|||+   .|++||||||+|||++.+
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~  160 (303)
T cd05088          84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGEN  160 (303)
T ss_pred             eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCC
Confidence            99999999999999997542               257899999999999999999965   489999999999999999


Q ss_pred             CCeeEcccccccccCCCCC-Cc---cc--cc-----Ccccc--cccccCCC--------Cc---------ceeccccCCC
Q 046594          199 CNAKLAGFGAANYCSGGSN-RR---NC--EK-----TSEMA--EDINDFVG--------GQ---------ECLDQRLYIP  248 (304)
Q Consensus       199 ~~~kl~Dfgla~~~~~~~~-~~---~~--~~-----~~~~s--~DV~S~~~--------~~---------~~~~~~~~~~  248 (304)
                      +.++|+|||++........ ..   ..  ..     ...++  +||||++.        +.         +..+......
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~  240 (303)
T cd05088         161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY  240 (303)
T ss_pred             CcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence            9999999999864321111 00   00  00     11222  99999210        11         1111000000


Q ss_pred             CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          249 NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       249 ~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ....+...+..+.+++.+||+     .+|++||++.+++++|+.+.+...
T Consensus       241 ~~~~~~~~~~~~~~li~~~l~-----~~p~~Rp~~~~il~~l~~~~~~~~  285 (303)
T cd05088         241 RLEKPLNCDDEVYDLMRQCWR-----EKPYERPSFAQILVSLNRMLEERK  285 (303)
T ss_pred             cCCCCCCCCHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHhhh
Confidence            122333456788999999999     999999999999999998876554

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-33  Score=238.46  Aligned_cols=229  Identities=20%  Similarity=0.207  Sum_probs=170.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHHhhCCCCCcccceeeeeeC----C
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEILLKSSSHLNIVTLLGYPQD----G  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~niv~~~~~~~~----~  129 (304)
                      ..+|..++.+|+|+||.|..+.++.   +|+.||||++.......     .++|...|+.++|+||+.+.+.+..    .
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~---t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~   97 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKR---TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK   97 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcC---CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence            3567778999999999999999874   57999999998433222     4444444999999999999998765    2


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      -+.+|+|+|+|+. +|.+.++... .+....+..++.|+++||.|+|+.   +++||||||+|+|++.+..+||+|||+|
T Consensus        98 f~DvYiV~elMet-DL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA  172 (359)
T KOG0660|consen   98 FNDVYLVFELMET-DLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA  172 (359)
T ss_pred             cceeEEehhHHhh-HHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence            2347999999955 9999998876 699999999999999999999655   8999999999999999999999999999


Q ss_pred             cccCCC----CC---Cccccc--------Ccccc--ccccc--------------CCCCc--------------------
Q 046594          210 NYCSGG----SN---RRNCEK--------TSEMA--EDIND--------------FVGGQ--------------------  238 (304)
Q Consensus       210 ~~~~~~----~~---~~~~~~--------~~~~s--~DV~S--------------~~~~~--------------------  238 (304)
                      +.....    ..   ..+..+        ...++  .||||              |++..                    
T Consensus       173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l  252 (359)
T KOG0660|consen  173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL  252 (359)
T ss_pred             eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence            988542    11   111111        33344  89999              44433                    


Q ss_pred             -ce--------eccccCCCCCCcc---hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHhhhccc
Q 046594          239 -EC--------LDQRLYIPNEKFK---ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQLFSSV  300 (304)
Q Consensus       239 -~~--------~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~~~~~~  300 (304)
                       .+        +......++..+.   +...+.+.+|+.+||.     .||.+|+|++|+++|  |+.+....+.|
T Consensus       253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~-----fdP~kRita~eAL~hPYl~~~hdp~dEP  323 (359)
T KOG0660|consen  253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLV-----FDPKKRITAEEALAHPYLAPYHDPEDEP  323 (359)
T ss_pred             HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhc-----cCccccCCHHHHhcChhhhhhcCCccCC
Confidence             00        0000000111111   2456778999999999     999999999999985  56665555443

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=4.4e-32  Score=235.41  Aligned_cols=223  Identities=17%  Similarity=0.123  Sum_probs=166.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--h---hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--Q---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.+|+|+||.||++..+   .+++.+|+|.+.....  .   ..+.+|+. ++.++||||+++++++...+. .
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~   77 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCL---LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNE-L   77 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEe---CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCe-E
Confidence            47899999999999999999876   3578999998764221  1   15667777 999999999999999987754 4


Q ss_pred             EEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ++++||+++|+|.+++...   ...+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.++|+|||++.
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~  154 (267)
T cd08228          78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGR  154 (267)
T ss_pred             EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccce
Confidence            9999999999999888642   2268999999999999999999965   489999999999999999999999999988


Q ss_pred             ccCCCCC--Cccccc----------Ccccc--ccccc--------C----C--CCc----ceeccccC-CCCCCcchHHH
Q 046594          211 YCSGGSN--RRNCEK----------TSEMA--EDIND--------F----V--GGQ----ECLDQRLY-IPNEKFKITSL  257 (304)
Q Consensus       211 ~~~~~~~--~~~~~~----------~~~~s--~DV~S--------~----~--~~~----~~~~~~~~-~~~~~~~~~~~  257 (304)
                      .......  ....+.          ....+  +||||        +    +  ...    ...+.... ......+...+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd08228         155 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYS  234 (267)
T ss_pred             eccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcC
Confidence            6643221  011111          11122  89999        1    1  010    10010000 00111223455


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      ..+.+++.+||.     .+|++||++.++++.|++++
T Consensus       235 ~~~~~li~~cl~-----~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         235 EKLRELVSMCIY-----PDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHHCC-----CCcccCcCHHHHHHHHHHhc
Confidence            779999999999     99999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=7e-32  Score=237.13  Aligned_cols=231  Identities=19%  Similarity=0.226  Sum_probs=172.1

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ...|.+.+.+|+|+||.||++.....  ..++..+|+|.+.......  .+.+|+. +++++||||+++++++...+. +
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~   82 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP-L   82 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc-c
Confidence            35688999999999999999875332  1245679999987654332  6777777 999999999999999988754 4


Q ss_pred             EEEEeecCCCChhhHhhhcC------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCe
Q 046594          134 CLVFEFMQRGSLRWNLREKG------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA  201 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~  201 (304)
                      +++|||+++++|.+++...+            ..+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~  159 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLV  159 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcE
Confidence            99999999999999987543            148999999999999999999965   489999999999999999999


Q ss_pred             eEcccccccccCCCCC----Cccc---cc-------Ccccc--ccccc--------CCCCc---------ceeccccCCC
Q 046594          202 KLAGFGAANYCSGGSN----RRNC---EK-------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIP  248 (304)
Q Consensus       202 kl~Dfgla~~~~~~~~----~~~~---~~-------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~  248 (304)
                      +|+|||+++.......    ....   .+       ...++  +||||        ...+.         +..+......
T Consensus       160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~  239 (288)
T cd05093         160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR  239 (288)
T ss_pred             EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            9999999976533221    0000   01       12223  99999        11011         1111111000


Q ss_pred             CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          249 NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       249 ~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ....+...+..+.+++.+||+     .||.+|||+.++++.|+++.....
T Consensus       240 ~~~~~~~~~~~l~~li~~~l~-----~~p~~Rpt~~~v~~~l~~~~~~~~  284 (288)
T cd05093         240 VLQRPRTCPKEVYDLMLGCWQ-----REPHMRLNIKEIHSLLQNLAKASP  284 (288)
T ss_pred             cCCCCCCCCHHHHHHHHHHcc-----CChhhCCCHHHHHHHHHHHHHhcc
Confidence            112233456789999999999     999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2.5e-32  Score=239.67  Aligned_cols=146  Identities=23%  Similarity=0.222  Sum_probs=123.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|++.+.||+|+||.||++.++.   +++.+|+|++......    ..+.+|+. ++.++||||+++++++...+ .+++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~l   77 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKE---TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-KLYL   77 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECC---CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC-EEEE
Confidence            68999999999999999998863   5689999998754322    25566777 99999999999999998774 5599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||||++++.+..+.. ....+++..+..++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.....
T Consensus        78 v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  152 (287)
T cd07848          78 VFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSE  152 (287)
T ss_pred             EEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence            999999876665443 334799999999999999999999754   899999999999999999999999999987643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=2.5e-32  Score=240.03  Aligned_cols=219  Identities=21%  Similarity=0.210  Sum_probs=155.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hh---CCCCCcccceeeeeeC---
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LK---SSSHLNIVTLLGYPQD---  128 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~---~l~h~niv~~~~~~~~---  128 (304)
                      .+|++.+.||+|+||.||++.+..  ..+..+|+|.++......    .+..|+. ++   .++||||+++++++..   
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~   78 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLK--NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   78 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcC--CCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence            379999999999999999998743  246789999987543221    2333333 44   4579999999998852   


Q ss_pred             -CCCceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          129 -GLQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       129 -~~~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                       ....+++||||++ ++|.+++..... .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||+||
T Consensus        79 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Df  154 (290)
T cd07862          79 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF  154 (290)
T ss_pred             CCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence             2345699999996 599998876533 68999999999999999999965   48999999999999999999999999


Q ss_pred             ccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceecc-------cc-
Q 046594          207 GAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQ-------RL-  245 (304)
Q Consensus       207 gla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~-------~~-  245 (304)
                      |+++....... ....++          ...++  +||||              |....      .+++.       .. 
T Consensus       155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~  234 (290)
T cd07862         155 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  234 (290)
T ss_pred             cceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence            99986644322 111122          12222  89999              11111      00000       00 


Q ss_pred             ---CCC-----------CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          246 ---YIP-----------NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       246 ---~~~-----------~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                         ..+           ......+.+..+.+++.+||+     .||++|||+.++++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-----~~P~~R~s~~~~l~h  287 (290)
T cd07862         235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT-----FNPAKRISAYSALSH  287 (290)
T ss_pred             hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhc-----cCchhcCCHHHHhcC
Confidence               000           000112345667899999999     999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=8.6e-32  Score=237.68  Aligned_cols=226  Identities=18%  Similarity=0.161  Sum_probs=168.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCC-CCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++.+.||+|+||.||++..+... ....+++|.++.....   ..+..|+. ++++ +||||+++++++...+.. +
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~-~   79 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDG-LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL-Y   79 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCC-CcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc-e
Confidence            46889999999999999998765321 1235788888743322   25666777 8888 799999999999887554 9


Q ss_pred             EEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC
Q 046594          135 LVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC  199 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~  199 (304)
                      +++||+++|+|.+++....               ..+++..+..++.|++.||+|||+.   +++||||||+|||++.++
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~  156 (297)
T cd05089          80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL  156 (297)
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence            9999999999999997542               2588999999999999999999754   899999999999999999


Q ss_pred             CeeEcccccccccCCCCC--Cc--c--ccc-----Ccccc--ccccc--------CCCCc---------c---eeccccC
Q 046594          200 NAKLAGFGAANYCSGGSN--RR--N--CEK-----TSEMA--EDIND--------FVGGQ---------E---CLDQRLY  246 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~--~~--~--~~~-----~~~~s--~DV~S--------~~~~~---------~---~~~~~~~  246 (304)
                      .+||+|||++........  ..  .  ...     ...++  +||||        +..+.         +   ...... 
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~-  235 (297)
T cd05089         157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-  235 (297)
T ss_pred             eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-
Confidence            999999999864322111  00  0  001     12223  99999        11111         0   111111 


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                        ....+...+..+.+++.+||+     .+|.+|||+.++++.|+.+.+...
T Consensus       236 --~~~~~~~~~~~~~~li~~~l~-----~~p~~Rp~~~~i~~~l~~~~~~~~  280 (297)
T cd05089         236 --RMEKPRNCDDEVYELMRQCWR-----DRPYERPPFAQISVQLSRMLEARK  280 (297)
T ss_pred             --CCCCCCCCCHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHhhc
Confidence              223344566889999999999     999999999999999999887554

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=6e-32  Score=236.15  Aligned_cols=225  Identities=23%  Similarity=0.269  Sum_probs=170.2

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|.+.+.+|+|+||.||++.....  ..++..+|+|.++.....   ..+.+|+. ++.++|+||+++++++.... .
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~   82 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD-P   82 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC-C
Confidence            35789999999999999999876543  234578999999865544   26777877 99999999999999998884 4


Q ss_pred             eEEEEeecCCCChhhHhhhcC-------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC
Q 046594          133 RCLVFEFMQRGSLRWNLREKG-------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC  199 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~  199 (304)
                      .+++|||+++++|.+++...+             ..+++..+..++.|++.||+|||.   .+++||||||+||+++.++
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~  159 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCC
Confidence            599999999999999997642             257899999999999999999965   4899999999999999999


Q ss_pred             CeeEcccccccccCCCCC----Cccc-----cc-----Ccccc--ccccc--------CCCCc---------ceeccccC
Q 046594          200 NAKLAGFGAANYCSGGSN----RRNC-----EK-----TSEMA--EDIND--------FVGGQ---------ECLDQRLY  246 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~----~~~~-----~~-----~~~~s--~DV~S--------~~~~~---------~~~~~~~~  246 (304)
                      .++|+|||++........    ....     ..     .+.++  +||||        +..+.         +..+....
T Consensus       160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~  239 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ  239 (280)
T ss_pred             eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            999999999976532221    0000     01     22233  99999        11011         11111000


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      ......+...+..+.+++.+||.     .||++||++.|+++.|++
T Consensus       240 ~~~~~~~~~~~~~~~~li~~~l~-----~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         240 GRLLQRPRTCPSEVYDIMLGCWK-----RDPQQRINIKDIHERLQK  280 (280)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcC-----CCcccCCCHHHHHHHhhC
Confidence            00123344567889999999999     999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=6.9e-32  Score=237.19  Aligned_cols=228  Identities=18%  Similarity=0.221  Sum_probs=168.9

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++..+...  ..+..+|+|.........   .+.+|.. ++.++||||+++++++...+..
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            468999999999999999998765322  235689999887544322   5666777 9999999999999998877554


Q ss_pred             eEEEEeecCCCChhhHhhhcC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          133 RCLVFEFMQRGSLRWNLREKG---------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                       ++||||+++|+|.+++....         ..+.+..+..++.|++.||+|||+.   +++||||||+||+++.++.++|
T Consensus        85 -~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          85 -LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             -EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence             99999999999999997532         1456778899999999999999654   8999999999999999999999


Q ss_pred             cccccccccCCCCC--Ccc--c---cc-------Ccccc--cccccCC------------CCc-----ceeccccCCCCC
Q 046594          204 AGFGAANYCSGGSN--RRN--C---EK-------TSEMA--EDINDFV------------GGQ-----ECLDQRLYIPNE  250 (304)
Q Consensus       204 ~Dfgla~~~~~~~~--~~~--~---~~-------~~~~s--~DV~S~~------------~~~-----~~~~~~~~~~~~  250 (304)
                      +|||+++.......  ...  .   .+       .+.++  +||||++            +..     +..+........
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~  240 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL  240 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            99999876533221  000  0   00       22233  8999910            110     111111100012


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ..+..++..+.+++.+||+     .||++|||+.++++.|++...
T Consensus       241 ~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         241 DQPDNCPERVTDLMRMCWQ-----FNPKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             CCCCCCCHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHhhcC
Confidence            3344556889999999999     999999999999999987654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.2e-32  Score=257.23  Aligned_cols=219  Identities=19%  Similarity=0.219  Sum_probs=166.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCC---
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ---  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~---  131 (304)
                      .+|++.+.||+|+||.||++.+.   .+++.||||.+.......    .+..|+. +..++|+|++++++.+...+.   
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRV---SDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEc---CCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            58999999999999999999875   457999999987543221    5666777 999999999999887654321   


Q ss_pred             ----ceEEEEeecCCCChhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          132 ----RRCLVFEFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       132 ----~~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                          .+++||||+++|+|.+++....   ..+++..+..++.|++.||+|||.   .+|+||||||+|||++.++.+||+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEE
Confidence                3589999999999999987532   278999999999999999999965   489999999999999999999999


Q ss_pred             ccccccccCCCCC----Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCc
Q 046594          205 GFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKF  252 (304)
Q Consensus       205 Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~  252 (304)
                      |||+++.......    ....++          ...++  +||||              |....  +++...+.......
T Consensus       186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~  265 (496)
T PTZ00283        186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPL  265 (496)
T ss_pred             ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence            9999986643221    112222          12233  89999              11111  12222221112334


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +...+..+.+++.+||+     .||.+||++.+++++
T Consensus       266 ~~~~~~~l~~li~~~L~-----~dP~~RPs~~ell~~  297 (496)
T PTZ00283        266 PPSISPEMQEIVTALLS-----SDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCCCCHHHHHHHHHHcc-----cChhhCcCHHHHHhC
Confidence            56677889999999999     999999999999876

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=1.8e-31  Score=231.37  Aligned_cols=221  Identities=22%  Similarity=0.184  Sum_probs=167.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.+|+|+||.||++.+.+    ...+|+|.++.... ...+..|+. ++.++|+||+++++++... . .++|
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~----~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-~-~~lv   78 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-P-IYIV   78 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecC----CceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCC-C-cEEE
Confidence            4689999999999999999997642    35699999986443 336777887 9999999999999987543 4 4999


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++|+|.+++....+ .+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~  155 (262)
T cd05071          79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  155 (262)
T ss_pred             EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence            999999999999986432 68999999999999999999965   48999999999999999999999999999766433


Q ss_pred             CCC---ccccc----------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHHHHH
Q 046594          216 SNR---RNCEK----------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       216 ~~~---~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ...   ...+.          ...++  +||||        ...+.         +..+..........+...+..+.++
T Consensus       156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  235 (262)
T cd05071         156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL  235 (262)
T ss_pred             ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHH
Confidence            221   11110          12233  99999        11011         1111110000122344567889999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      +.+||+     .||++||++.++++.|+..
T Consensus       236 i~~~l~-----~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         236 MCQCWR-----KEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHcc-----CCcccCCCHHHHHHHHHHh
Confidence            999999     9999999999999999865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.98  E-value=6.1e-33  Score=249.45  Aligned_cols=205  Identities=22%  Similarity=0.248  Sum_probs=169.9

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCCC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG  143 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~g  143 (304)
                      ++-+|.|+.|.||+.+.+     ++.||||+++.-+.     .++. |++|+|+||+.+.|+|... ..+|||||||+.|
T Consensus       129 LeWlGSGaQGAVF~Grl~-----netVAVKKV~elkE-----TdIKHLRkLkH~NII~FkGVCtqs-PcyCIiMEfCa~G  197 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH-----NETVAVKKVRELKE-----TDIKHLRKLKHPNIITFKGVCTQS-PCYCIIMEFCAQG  197 (904)
T ss_pred             hhhhccCcccceeeeecc-----CceehhHHHhhhhh-----hhHHHHHhccCcceeeEeeeecCC-ceeEEeeeccccc
Confidence            467899999999988865     58999999875322     3344 9999999999999999988 4449999999999


Q ss_pred             ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-Ccccc
Q 046594          144 SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-RRNCE  222 (304)
Q Consensus       144 sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~  222 (304)
                      -|..+|+..+ ++.....+.|..+||.||.|||.+   .|||||||.-||||+.+..+||+|||-++....-.+ ....|
T Consensus       198 qL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaG  273 (904)
T KOG4721|consen  198 QLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAG  273 (904)
T ss_pred             cHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhh
Confidence            9999999877 899999999999999999999885   699999999999999999999999999998876655 55556


Q ss_pred             c----------Ccccc--cccccCCC-----------Cc---------ceeccccCCCCCCcchHHHHHHHHHHHHhccc
Q 046594          223 K----------TSEMA--EDINDFVG-----------GQ---------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISC  270 (304)
Q Consensus       223 ~----------~~~~s--~DV~S~~~-----------~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~  270 (304)
                      +          ....+  .|||||+.           ..         .+-...+   ....|..|++.+.-|+++||+ 
T Consensus       274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL---~LpvPstcP~GfklL~Kqcw~-  349 (904)
T KOG4721|consen  274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSL---HLPVPSTCPDGFKLLLKQCWN-  349 (904)
T ss_pred             hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcc---cccCcccCchHHHHHHHHHHh-
Confidence            5          22233  99999321           11         1222333   445778899999999999999 


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHH
Q 046594          271 CSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       271 ~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                          -.|..||++.+++.||+-
T Consensus       350 ----sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  350 ----SKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             ----cCCCCCccHHHHHHHHhh
Confidence                999999999999999974

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.98  E-value=1.5e-31  Score=232.64  Aligned_cols=229  Identities=18%  Similarity=0.191  Sum_probs=172.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|.+.+.+|+|+||.||++.+.........+++|.........   .+.+|+. +++++||||+++++++... .. +
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~-~   82 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PV-W   82 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-Cc-E
Confidence            356888999999999999999875432334579999987654322   6777877 9999999999999998754 44 8


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ++|||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||+++....
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeeccc
Confidence            99999999999999987655789999999999999999999654   899999999999999999999999999876543


Q ss_pred             CCC---Cccc----c-c-----Ccccc--cccccCC--------CCc---------ceeccccCCCCCCcchHHHHHHHH
Q 046594          215 GSN---RRNC----E-K-----TSEMA--EDINDFV--------GGQ---------ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       215 ~~~---~~~~----~-~-----~~~~s--~DV~S~~--------~~~---------~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ...   ....    . .     ...++  +||||++        .+.         +.............+..++..+.+
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (270)
T cd05056         160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS  239 (270)
T ss_pred             ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHH
Confidence            321   0000    0 0     11222  8999910        011         111100000012334566788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      ++.+|+.     .+|++|||+.++++.|+++...+
T Consensus       240 li~~~l~-----~~P~~Rpt~~~~~~~l~~~~~~~  269 (270)
T cd05056         240 LMTKCWA-----YDPSKRPRFTELKAQLSDILQEE  269 (270)
T ss_pred             HHHHHcC-----CChhhCcCHHHHHHHHHHHHhcc
Confidence            9999999     99999999999999999987643

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.98  E-value=1.4e-31  Score=235.85  Aligned_cols=224  Identities=20%  Similarity=0.225  Sum_probs=167.4

Q ss_pred             HHhhccccccCCccccceeeecceeec-------------CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS-------------RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVT  121 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-------------~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~  121 (304)
                      ..+|++.+.||+|+||.||++.+....             ..+..+|+|.+.......   .+..|+. +++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            468999999999999999998764321             123579999988654332   6677777 99999999999


Q ss_pred             eeeeeeCCCCceEEEEeecCCCChhhHhhhcC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 046594          122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKG----------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD  191 (304)
Q Consensus       122 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~  191 (304)
                      +++++..++ ..++++||+++++|.+++....          ..+++..++.++.|++.||+|||+.   +++||||||+
T Consensus        84 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~  159 (296)
T cd05051          84 LLGVCTVDP-PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR  159 (296)
T ss_pred             EEEEEecCC-CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence            999998874 4499999999999999987654          1589999999999999999999764   8999999999


Q ss_pred             CeeeCCCCCeeEcccccccccCCCCC---C-cccc---c-------Ccccc--cccccCC----------CC--------
Q 046594          192 NILLDELCNAKLAGFGAANYCSGGSN---R-RNCE---K-------TSEMA--EDINDFV----------GG--------  237 (304)
Q Consensus       192 Nill~~~~~~kl~Dfgla~~~~~~~~---~-~~~~---~-------~~~~s--~DV~S~~----------~~--------  237 (304)
                      ||+++.++.++|+|||+++.......   . ...+   +       ...++  +||||++          ..        
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~  239 (296)
T cd05051         160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD  239 (296)
T ss_pred             ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence            99999999999999999876533221   0 0000   0       12233  9999911          00        


Q ss_pred             cceeccc-------cCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          238 QECLDQR-------LYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       238 ~~~~~~~-------~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      .+.+...       -.......+...+.++.+++.+||+     .||++|||+.++++.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~-----~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         240 QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWR-----RDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhc-----cChhcCCCHHHHHHHhc
Confidence            0000000       0000112233455789999999999     99999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.98  E-value=2.6e-31  Score=236.51  Aligned_cols=231  Identities=20%  Similarity=0.201  Sum_probs=171.6

Q ss_pred             HHhhccccccCCccccceeeecceee----cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV----SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~  129 (304)
                      ..+|.+.+.+|+|+||.||++...+.    ......+|+|.+.......   .+..|+. ++.+ +||||+++++++...
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            46899999999999999999875432    1235679999987543332   5566666 8888 699999999999877


Q ss_pred             CCceEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      +. ++++|||+++|+|.+++....               ..+++.++..++.|++.||+|||+   .|++||||||+|||
T Consensus        91 ~~-~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nil  166 (314)
T cd05099          91 GP-LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVL  166 (314)
T ss_pred             Cc-eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEE
Confidence            44 599999999999999997632               258899999999999999999965   48999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCC----Ccccc---c-------Ccccc--cccccC--------CCCc---------cee
Q 046594          195 LDELCNAKLAGFGAANYCSGGSN----RRNCE---K-------TSEMA--EDINDF--------VGGQ---------ECL  241 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~---~-------~~~~s--~DV~S~--------~~~~---------~~~  241 (304)
                      ++.++.+||+|||+++.......    ....+   +       ...++  +||||+        ..+.         +..
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~  246 (314)
T cd05099         167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF  246 (314)
T ss_pred             EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999999986643211    00000   0       22233  899991        1011         111


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ...........+..++..+.+++.+||.     .||++|||+.++++.|+++....+
T Consensus       247 ~~~~~~~~~~~~~~~~~~l~~li~~cl~-----~~p~~Rps~~~ll~~l~~~~~~~~  298 (314)
T cd05099         247 KLLREGHRMDKPSNCTHELYMLMRECWH-----AVPTQRPTFKQLVEALDKVLAAVS  298 (314)
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcC-----CCcccCcCHHHHHHHHHHHHHHhc
Confidence            1000000123445566789999999999     999999999999999999986443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.98  E-value=1.1e-31  Score=231.48  Aligned_cols=218  Identities=21%  Similarity=0.280  Sum_probs=170.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ...|++.+.+|.|+||.||.+...     ++.+|+|.+..... ...+..|+. ++.++|+||+++++++.+. ...++|
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-----~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v   78 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-----GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG-NPLYIV   78 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-----CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC-CCeEEE
Confidence            467899999999999999988753     68899999987655 236667777 9999999999999999886 444999


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++..... .+++..+..++.|++.||.|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~  155 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG  155 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence            999999999999976643 689999999999999999999654   8999999999999999999999999999876433


Q ss_pred             CC--Cccc-------ccCcccc--cccccCC--------CCc---------ce---eccccCCCCCCcchHHHHHHHHHH
Q 046594          216 SN--RRNC-------EKTSEMA--EDINDFV--------GGQ---------EC---LDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       216 ~~--~~~~-------~~~~~~s--~DV~S~~--------~~~---------~~---~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ..  ....       ...+..+  +||||++        .+.         ++   +....   ....+...+..+.+++
T Consensus       156 ~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li  232 (256)
T cd05039         156 QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY---RMEAPEGCPPEVYKVM  232 (256)
T ss_pred             cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC---CCCCccCCCHHHHHHH
Confidence            22  1110       0122233  8999911        011         11   11111   2233445568899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+||.     .+|++|||+.++++.|+++
T Consensus       233 ~~~l~-----~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         233 KDCWE-----LDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHhc-----cChhhCcCHHHHHHHHhcC
Confidence            99999     9999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.98  E-value=1.6e-31  Score=231.19  Aligned_cols=217  Identities=20%  Similarity=0.212  Sum_probs=167.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.+|+|+||.||++...    ++..+|+|.+...... ..+.+|+. +++++|+|++++++++... . .+++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~----~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-~-~~lv   78 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN----GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEE-P-IYIV   78 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec----CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCC-C-cEEE
Confidence            568999999999999999998654    4577999998764433 36777887 9999999999999987543 4 4999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++.... ..+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05070          79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN  155 (260)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence            99999999999997643 2689999999999999999999764   7999999999999999999999999999766433


Q ss_pred             CC---Ccccc---c-------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHHHH
Q 046594          216 SN---RRNCE---K-------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~---~~~~~---~-------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..   ....+   +       ....+  +||||        ...+.            +.+....   ....+...+..+
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  232 (260)
T cd05070         156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY---RMPCPQDCPISL  232 (260)
T ss_pred             ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCcCCHHH
Confidence            22   10110   1       12223  99999        11011            1111111   223445567889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      .+++.+||.     .||++|||+.++.+.|++
T Consensus       233 ~~li~~~l~-----~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         233 HELMLQCWK-----KDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHcc-----cCcccCcCHHHHHHHHhc
Confidence            999999999     999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.98  E-value=2e-31  Score=233.04  Aligned_cols=224  Identities=21%  Similarity=0.257  Sum_probs=171.8

Q ss_pred             HHhhccccccCCccccceeeecceee-cCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCC-Cc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGL-QR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~  132 (304)
                      .+.|+..+.+|+|+||.||++.+... ...+..+|+|.+......   ..+..|+. ++.++|+||+++++++...+ ..
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~   82 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS   82 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence            35688899999999999999986432 335789999999866553   37788888 99999999999999987632 34


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .+++|||+++++|.+++......+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++...
T Consensus        83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038          83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence            5999999999999999987765799999999999999999999654   8999999999999999999999999999876


Q ss_pred             CCCCC--C---ccc----c-c-----Ccccc--cccccCC-----------CCc----ce-------------------e
Q 046594          213 SGGSN--R---RNC----E-K-----TSEMA--EDINDFV-----------GGQ----EC-------------------L  241 (304)
Q Consensus       213 ~~~~~--~---~~~----~-~-----~~~~s--~DV~S~~-----------~~~----~~-------------------~  241 (304)
                      .....  .   ...    . .     ....+  +||||++           ...    ..                   +
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05038         160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL  239 (284)
T ss_pred             ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence            53221  0   000    0 0     12222  9999911           000    00                   0


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ....   ....+..++.++.+++.+||+     .+|++|||+.+++++|+++
T Consensus       240 ~~~~---~~~~~~~~~~~~~~li~~cl~-----~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         240 KEGE---RLPRPPSCPDEVYDLMKLCWE-----AEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HcCC---cCCCCccCCHHHHHHHHHHhc-----cChhhCCCHHHHHHHHhhc
Confidence            0011   112233445789999999999     9999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=4.2e-32  Score=238.32  Aligned_cols=217  Identities=18%  Similarity=0.166  Sum_probs=164.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .|++.+.||+|+||.||++.+.   .+++.||+|.+......     ..+.+|+. ++.++||||+++++.+..++ .++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   76 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-ALC   76 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEc---CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-eEE
Confidence            4788999999999999998875   35789999998753321     14556777 99999999999999998874 559


Q ss_pred             EEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.   +++||||||+||++++++.++|+|||++....
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605          77 LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             EEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            9999999999998887643 3699999999999999999999764   89999999999999999999999999998764


Q ss_pred             CCCC-Cccccc----------Ccccc--ccccc--------------CCCCcc-----eeccccCCCCCCcchHHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQE-----CLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .... ....++          ....+  +||||              |.....     .+...+......++...+..+.
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
T cd05605         154 EGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAAR  233 (285)
T ss_pred             CCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHH
Confidence            3322 111112          12223  89999              211110     0111110112334455678899


Q ss_pred             HHHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      +++.+||.     .||++||     ++.++++|
T Consensus       234 ~li~~~l~-----~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         234 SICRQLLT-----KDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HHHHHHcc-----CCHHHhcCCCCCCHHHHhcC
Confidence            99999999     9999999     88899776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.98  E-value=1.6e-31  Score=233.43  Aligned_cols=224  Identities=23%  Similarity=0.211  Sum_probs=168.0

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|++|.||++.+....  ..+..+++|.........   .+..|.. ++.++|+||+++++++.+.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            367899999999999999999876411  135789999887544322   5666777 9999999999999999887555


Q ss_pred             eEEEEeecCCCChhhHhhhcCC------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC---CeeE
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC---NAKL  203 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~---~~kl  203 (304)
                       +++|||+++++|.+++.....      .+++..+..++.|++.||+|||+.   +++||||||+||+++.++   .+||
T Consensus        85 -~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          85 -FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             -EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence             999999999999999876532      589999999999999999999654   799999999999998654   5999


Q ss_pred             cccccccccCCCCCC----c---c--ccc-----Ccccc--ccccc--------CCCCc---------ceeccccCCCCC
Q 046594          204 AGFGAANYCSGGSNR----R---N--CEK-----TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNE  250 (304)
Q Consensus       204 ~Dfgla~~~~~~~~~----~---~--~~~-----~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~  250 (304)
                      +|||+++........    .   .  ...     ...++  +||||        +..+.         +..+......+.
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~  240 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL  240 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            999999866322210    0   0  000     22233  99999        11111         111111100123


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      ..+...+..+.+++.+||+     .+|++|||+.+++++|+
T Consensus       241 ~~~~~~~~~~~~~i~~cl~-----~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         241 DPPKGCPGPVYRIMTDCWQ-----HTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcC-----CCcccCcCHHHHHHHhh
Confidence            4455667889999999999     99999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.98  E-value=1.8e-31  Score=232.13  Aligned_cols=222  Identities=18%  Similarity=0.192  Sum_probs=160.7

Q ss_pred             ccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC-----Cc
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL-----QR  132 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~-----~~  132 (304)
                      .+.+.||+|+||.||++.+.... ....+|+|.++.....    ..+.+|.. ++.++|+||+++++++....     ..
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDD-SILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             ccccccCcccCceEEEeEEccCC-CeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            45688999999999998875331 1236999988754211    25666777 99999999999999875321     23


Q ss_pred             eEEEEeecCCCChhhHhhhc-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          133 RCLVFEFMQRGSLRWNLREK-----GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                      .++++||+++|+|.+++...     ...+++.....++.|++.||+|||+.   +|+||||||+|||++.++.++|+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence            58999999999999887432     22589999999999999999999764   89999999999999999999999999


Q ss_pred             cccccCCCCC--Ccc--ccc----------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcch
Q 046594          208 AANYCSGGSN--RRN--CEK----------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKI  254 (304)
Q Consensus       208 la~~~~~~~~--~~~--~~~----------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~  254 (304)
                      +++.......  ...  ...          ...++  +||||        ...+.         ++.+..........+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  237 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPP  237 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence            9987643221  000  000          12223  99999        11111         1001000000113344


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ..+..+.+++.+||.     .||++|||+.+++++|+++
T Consensus       238 ~~~~~~~~li~~~l~-----~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         238 DCLDGLYSLMSSCWL-----LNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCHHHHHHHHHHcC-----CCcccCcCHHHHHHHHHhh
Confidence            566789999999999     9999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=4.7e-32  Score=243.30  Aligned_cols=144  Identities=22%  Similarity=0.285  Sum_probs=122.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCC----C
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGL----Q  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~----~  131 (304)
                      ||++.+.||+|+||.||++.++   .++..||+|++.....    ...+..|+. ++.++||||+++++++....    .
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   77 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDT---HTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK   77 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEEC---CCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCc
Confidence            6899999999999999999876   3578999999874321    125667777 99999999999999886432    2


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||++ ++|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        78 ~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~  152 (338)
T cd07859          78 DIYVVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV  152 (338)
T ss_pred             eEEEEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence            3699999995 59999887765 799999999999999999999664   899999999999999999999999999976


Q ss_pred             c
Q 046594          212 C  212 (304)
Q Consensus       212 ~  212 (304)
                      .
T Consensus       153 ~  153 (338)
T cd07859         153 A  153 (338)
T ss_pred             c
Confidence            5

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.98  E-value=1.6e-31  Score=230.88  Aligned_cols=215  Identities=19%  Similarity=0.178  Sum_probs=166.1

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++.+......+..+|+|.+......   ..+..|+. ++.+.|+||+++++++... . ++++|||++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~-~~~v~e~~~   78 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE-P-LMLVMELAP   78 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC-c-eEEEEEeCC
Confidence            4689999999999988655334579999999866542   26777777 9999999999999987643 3 499999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Cc
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RR  219 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~  219 (304)
                      +|+|.+++.... .+++..+..++.|++.||+|||..   +++||||||+|||++.++.+||+|||+++.......  ..
T Consensus        79 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~  154 (257)
T cd05060          79 LGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA  154 (257)
T ss_pred             CCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence            999999998776 799999999999999999999654   799999999999999999999999999986644332  10


Q ss_pred             ccc------c-------Ccccc--ccccc--------C----CCCc--------ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          220 NCE------K-------TSEMA--EDIND--------F----VGGQ--------ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       220 ~~~------~-------~~~~s--~DV~S--------~----~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ...      .       ...++  +||||        .    .+..        ..+....   ....+...+..+.+++
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li  231 (257)
T cd05060         155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE---RLPRPEECPQEIYSIM  231 (257)
T ss_pred             ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC---cCCCCCCCCHHHHHHH
Confidence            000      0       12223  99999        1    1111        0011111   1234455668899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      .+||.     .||++||++.++++.|+++.
T Consensus       232 ~~cl~-----~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         232 LSCWK-----YRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHhc-----CChhhCcCHHHHHHHHHhcc
Confidence            99999     99999999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.98  E-value=6.2e-32  Score=235.96  Aligned_cols=216  Identities=20%  Similarity=0.248  Sum_probs=154.1

Q ss_pred             ccCCccccceeeecceee---------------------cCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccce
Q 046594           67 SFGDSVEGLTLIKGDRAV---------------------SRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTL  122 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~---------------------~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~  122 (304)
                      .||+|+||.||++.....                     ......|++|.+.......  .+.++.. ++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            589999999998764211                     0122468999987544332  5666666 999999999999


Q ss_pred             eeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC---
Q 046594          123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC---  199 (304)
Q Consensus       123 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~---  199 (304)
                      ++++...... ++||||+++|+|..++....+.+++..+..++.|++.||+|||+   ++++||||||+|||++.++   
T Consensus        82 ~~~~~~~~~~-~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~  157 (274)
T cd05076          82 HGVCVRGSEN-IMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAE  157 (274)
T ss_pred             EEEEEeCCce-EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCccc
Confidence            9999887555 99999999999999997765579999999999999999999964   4899999999999997643   


Q ss_pred             ----CeeEcccccccccCCCCC-Cccc-------cc-Ccccc--cccccCC--------CCcceeccc-------cCCCC
Q 046594          200 ----NAKLAGFGAANYCSGGSN-RRNC-------EK-TSEMA--EDINDFV--------GGQECLDQR-------LYIPN  249 (304)
Q Consensus       200 ----~~kl~Dfgla~~~~~~~~-~~~~-------~~-~~~~s--~DV~S~~--------~~~~~~~~~-------~~~~~  249 (304)
                          .++++|||++........ ....       .. ...++  +||||+.        .+...+...       .....
T Consensus       158 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  237 (274)
T cd05076         158 GTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKK  237 (274)
T ss_pred             CccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhc
Confidence                389999998764432211 1000       00 12233  9999911        111000000       00001


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      ...+......+.+++.+||+     .+|++|||+.+++++|+
T Consensus       238 ~~~~~~~~~~~~~li~~cl~-----~~p~~Rps~~~il~~L~  274 (274)
T cd05076         238 HRLPEPSCKELATLISQCLT-----YEPTQRPSFRTILRDLT  274 (274)
T ss_pred             cCCCCCCChHHHHHHHHHcc-----cChhhCcCHHHHHHhhC
Confidence            12223334678999999999     99999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.98  E-value=1.6e-31  Score=234.21  Aligned_cols=221  Identities=21%  Similarity=0.301  Sum_probs=167.0

Q ss_pred             HhhccccccCCccccceeeecceee-cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..|++.+.||+|+||.||++..... ...+..+++|.+.......   .+..|+. ++.++||||+++++++...... |
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~   83 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV-C   83 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce-E
Confidence            5688999999999999999875322 1356899999997543322   6777777 9999999999999998887555 9


Q ss_pred             EEEeecCCCChhhHhhhcC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC
Q 046594          135 LVFEFMQRGSLRWNLREKG----------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL  198 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~----------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~  198 (304)
                      ++|||+++++|.+++....                ..+++.+...++.|++.||+|||+.   +++||||||+|||++.+
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~  160 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ  160 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC
Confidence            9999999999999985331                1478899999999999999999654   89999999999999999


Q ss_pred             CCeeEcccccccccCCCCC----Ccccc---c-------Ccccc--ccccc--------CCCCc------------ceec
Q 046594          199 CNAKLAGFGAANYCSGGSN----RRNCE---K-------TSEMA--EDIND--------FVGGQ------------ECLD  242 (304)
Q Consensus       199 ~~~kl~Dfgla~~~~~~~~----~~~~~---~-------~~~~s--~DV~S--------~~~~~------------~~~~  242 (304)
                      +.+||+|||+++.......    ....+   +       ...++  +||||        +..+.            +.+.
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~  240 (283)
T cd05090         161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR  240 (283)
T ss_pred             CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            9999999999976533221    00000   1       12223  99999        11011            1111


Q ss_pred             cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          243 QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       243 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      ...   ....+..++..+.+++.+||+     .||++||++.+++++|..
T Consensus       241 ~~~---~~~~~~~~~~~~~~li~~cl~-----~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         241 KRQ---LLPCSEDCPPRMYSLMTECWQ-----EGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             cCC---cCCCCCCCCHHHHHHHHHHcc-----cCcccCcCHHHHHHHhhc
Confidence            111   123344567889999999999     999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.98  E-value=2.1e-31  Score=239.10  Aligned_cols=227  Identities=20%  Similarity=0.243  Sum_probs=171.1

Q ss_pred             HHhhccccccCCccccceeeecceeecC----CCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSR----NLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||.+.+.+..+    ....+|+|.........   .+..|+. ++++ +||||+++++++...
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   90 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence            3579999999999999999998654322    23478999887543332   5666777 8888 899999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      + .+++++||+++|+|.+++....               ..+++.++..++.|++.||+|||..   +++||||||+|||
T Consensus        91 ~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil  166 (334)
T cd05100          91 G-PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVL  166 (334)
T ss_pred             C-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEE
Confidence            5 4599999999999999987532               1578899999999999999999654   8999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCC----Ccccc---c-------Ccccc--ccccc--------CCCCc---------cee
Q 046594          195 LDELCNAKLAGFGAANYCSGGSN----RRNCE---K-------TSEMA--EDIND--------FVGGQ---------ECL  241 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~---~-------~~~~s--~DV~S--------~~~~~---------~~~  241 (304)
                      ++.++.+||+|||+++.......    ....+   +       ...++  +||||        ...+.         +..
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~  246 (334)
T cd05100         167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF  246 (334)
T ss_pred             EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            99999999999999986543221    00000   0       12222  89999        11010         111


Q ss_pred             c---cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          242 D---QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       242 ~---~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      .   ...   ....+...+..+.+++.+||.     .+|++|||+.+++++|+++....
T Consensus       247 ~~~~~~~---~~~~~~~~~~~l~~li~~cl~-----~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         247 KLLKEGH---RMDKPANCTHELYMIMRECWH-----AVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             HHHHcCC---CCCCCCCCCHHHHHHHHHHcc-----cChhhCcCHHHHHHHHHHHhhhc
Confidence            1   111   223445566789999999999     99999999999999999998543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.98  E-value=6.1e-33  Score=232.81  Aligned_cols=216  Identities=18%  Similarity=0.137  Sum_probs=176.0

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeec
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      |.++++||+|.||.||++.++   ..|..+|+|....+..-.++-.|+. +.+...|++|++||.++...+ +|+|||||
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~---EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD-LWIVMEYC  110 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHR---ESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD-LWIVMEYC  110 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHh---ccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCc-eEeehhhc
Confidence            677899999999999999998   4689999999987766556666666 999999999999999988744 59999999


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--C
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--R  218 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~  218 (304)
                      ..|++.+.++.+++++.+.....+++..+.||+|||..   .-+|||||..|||++.+|.+||+|||.|..+.....  .
T Consensus       111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRN  187 (502)
T KOG0574|consen  111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRN  187 (502)
T ss_pred             CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhC
Confidence            99999999999988999999999999999999999876   579999999999999999999999999998866543  3


Q ss_pred             ccccc-----------Ccccc-ccccc-----------CCCCcce-------eccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          219 RNCEK-----------TSEMA-EDIND-----------FVGGQEC-------LDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       219 ~~~~~-----------~~~~s-~DV~S-----------~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                      +..|+           -+|-+ +||||           .|+..++       +-+.-..+.-.-|+..+.++-+++++||
T Consensus       188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CL  267 (502)
T KOG0574|consen  188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCL  267 (502)
T ss_pred             ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHh
Confidence            33344           23333 99999           2222221       1122111122335667889999999999


Q ss_pred             cccCCCCCCCCCCCHHHHHHH
Q 046594          269 SCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .     +.|++|-|+.++++|
T Consensus       268 i-----K~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  268 I-----KKPEERKTALRLCEH  283 (502)
T ss_pred             c-----CCHHHHHHHHHHhhh
Confidence            9     999999999999886

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.98  E-value=3.2e-31  Score=231.77  Aligned_cols=226  Identities=19%  Similarity=0.178  Sum_probs=171.3

Q ss_pred             HHhhccccccCCccccceeeecceeec-CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS-RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||.+.+.... ..+..+++|.+.......   .+.+|.. +++++|+||+++++++...+...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            468999999999999999999876421 125789999987543332   5666777 99999999999999988765666


Q ss_pred             EEEEeecCCCChhhHhhhcC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          134 CLVFEFMQRGSLRWNLREKG-------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~-------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      ++++||+++|+|.+++....       ..+++.+++.++.|++.||+|||+.   +++||||||+||+++.++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence            99999999999999987642       2589999999999999999999754   8999999999999999999999999


Q ss_pred             ccccccCCCCC-------Cccc--cc-----Ccccc--ccccc--------CCCCc---------c---eeccccCCCCC
Q 046594          207 GAANYCSGGSN-------RRNC--EK-----TSEMA--EDIND--------FVGGQ---------E---CLDQRLYIPNE  250 (304)
Q Consensus       207 gla~~~~~~~~-------~~~~--~~-----~~~~s--~DV~S--------~~~~~---------~---~~~~~~~~~~~  250 (304)
                      |+++.+.....       ....  ..     ...++  +||||        +..+.         +   .+....   ..
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~  238 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY---RL  238 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC---CC
Confidence            99986533221       0000  01     12222  99999        11011         0   001111   11


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ..+..++..+.+++.+||.     .||++|||+.++++.|+.+..
T Consensus       239 ~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         239 AQPINCPDELFAVMACCWA-----LDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             CCCCcCCHHHHHHHHHHcC-----CChhhCCCHHHHHHHHHHHHh
Confidence            2234456789999999999     999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.98  E-value=1.4e-31  Score=233.53  Aligned_cols=224  Identities=20%  Similarity=0.275  Sum_probs=169.2

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.+|+|+||.||++..+...  ..+..+|+|.........   .+.+++. ++.++||||+++++++..... 
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~-   83 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP-   83 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC-
Confidence            468999999999999999998876543  345789999987554322   5667777 999999999999999988754 


Q ss_pred             eEEEEeecCCCChhhHhhhcC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          133 RCLVFEFMQRGSLRWNLREKG---------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                      .++||||+++|+|.+++....         ..+++..++.++.|++.||+|||+   .+++||||||+||+++.++.++|
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl  160 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEE
Confidence            499999999999999987532         147889999999999999999965   48999999999999999999999


Q ss_pred             cccccccccCCCCC----Ccc---ccc-------Ccccc--cccccCC--------CCc---------ceeccccCCCCC
Q 046594          204 AGFGAANYCSGGSN----RRN---CEK-------TSEMA--EDINDFV--------GGQ---------ECLDQRLYIPNE  250 (304)
Q Consensus       204 ~Dfgla~~~~~~~~----~~~---~~~-------~~~~s--~DV~S~~--------~~~---------~~~~~~~~~~~~  250 (304)
                      +|||+++.......    ...   ...       .+..+  +||||++        .+.         +...........
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~  240 (277)
T cd05032         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL  240 (277)
T ss_pred             CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCC
Confidence            99999876543221    011   111       22233  8999911        011         000000000012


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      ..+...+..+.+++.+||+     .+|++|||+.++++.|+
T Consensus       241 ~~~~~~~~~~~~li~~~l~-----~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         241 DLPENCPDKLLELMRMCWQ-----YNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcC-----CChhhCCCHHHHHHHhc
Confidence            3455567889999999999     99999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.98  E-value=2.1e-31  Score=235.83  Aligned_cols=223  Identities=22%  Similarity=0.218  Sum_probs=169.1

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.+.  ...+..+|+|.++......   .+.+|+. ++++ +||||+++++++...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            46899999999999999999875322  1245689999987643322   5677777 9999 79999999999988754


Q ss_pred             ceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      . +++|||+++|+|.+++..... .+++.++..++.|++.||+|||+.   +++|+||||+|||++.++.++|+|||+++
T Consensus       114 ~-~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         114 I-LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             e-EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcccc
Confidence            4 999999999999999976543 489999999999999999999754   89999999999999999999999999998


Q ss_pred             ccCCCCC---C-ccccc----------Ccccc--ccccc--------CCCCc-------------ceeccccCCCCCCcc
Q 046594          211 YCSGGSN---R-RNCEK----------TSEMA--EDIND--------FVGGQ-------------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       211 ~~~~~~~---~-~~~~~----------~~~~s--~DV~S--------~~~~~-------------~~~~~~~~~~~~~~~  253 (304)
                      .......   . ...+.          ....+  +||||        ...+.             .......   ....+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~  266 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY---RMAQP  266 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC---cCCCC
Confidence            6643321   0 00000          11222  89999        11011             1111111   11223


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ...+..+.+++.+||+     ++|++|||+.++++.|+++
T Consensus       267 ~~~~~~~~~li~~cl~-----~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         267 EHAPAEIYDIMKTCWD-----ADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CCCCHHHHHHHHHHcC-----CCchhCcCHHHHHHHHHhh
Confidence            3446789999999999     9999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.98  E-value=2.4e-31  Score=232.50  Aligned_cols=230  Identities=16%  Similarity=0.128  Sum_probs=173.9

Q ss_pred             HHhhccccccCCccccceeeecceeecC-CCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.++.... ....+|+|.........   .+.+|+. +++++||||+++++++..  ...
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~   83 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS--SQV   83 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--Cce
Confidence            4689999999999999999998753321 12369999887654332   6667777 999999999999999987  344


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++++||+++|+|.+++......+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++...
T Consensus        84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence            99999999999999998876679999999999999999999976   489999999999999999999999999998765


Q ss_pred             CCCC-Cc---cc----c-c-----Ccccc--cccccCC-------C-Cc---------ceeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RR---NC----E-K-----TSEMA--EDINDFV-------G-GQ---------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~---~~----~-~-----~~~~s--~DV~S~~-------~-~~---------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... ..   ..    . .     ...++  +||||++       . +.         ++.+..........+..+...+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (279)
T cd05057         161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDV  240 (279)
T ss_pred             CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHH
Confidence            3322 10   00    0 0     12223  9999911       0 11         1110000000123344456788


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      .+++.+||.     .||.+|||+.++++.|+++...+.
T Consensus       241 ~~~~~~~l~-----~~p~~Rp~~~~l~~~l~~~~~~~~  273 (279)
T cd05057         241 YMVLVKCWM-----IDAESRPTFKELINEFSKMARDPQ  273 (279)
T ss_pred             HHHHHHHcC-----CChhhCCCHHHHHHHHHHHHhCCc
Confidence            999999999     999999999999999999876544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.98  E-value=9.7e-32  Score=233.26  Aligned_cols=223  Identities=17%  Similarity=0.154  Sum_probs=167.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|++|.||++.++   .++..++||.+......     ..+.+|+. ++.++|+||+++++++..++. .
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~---~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-~   77 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCL---LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE-L   77 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeec---CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe-E
Confidence            46889999999999999999875   35789999987643221     16667777 999999999999999988754 4


Q ss_pred             EEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      +++|||+++++|.+++...   ...+++..++.++.|++.||+|||+   .+++|+||||+||+++.++.++|+|||++.
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~  154 (267)
T cd08229          78 NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGR  154 (267)
T ss_pred             EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhh
Confidence            9999999999999988642   2368999999999999999999965   489999999999999999999999999987


Q ss_pred             ccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc----ceeccccCCCCCC-cchHHH
Q 046594          211 YCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ----ECLDQRLYIPNEK-FKITSL  257 (304)
Q Consensus       211 ~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~----~~~~~~~~~~~~~-~~~~~~  257 (304)
                      .......  ....+.          ....+  +||||              +....    ............. .+...+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd08229         155 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS  234 (267)
T ss_pred             ccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCccccc
Confidence            6543222  111111          11222  89999              11110    0000000000011 123456


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      ..+.+++.+||.     .||++|||+.+|++.++++.
T Consensus       235 ~~~~~li~~~l~-----~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         235 EELRQLVNMCIN-----PDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHHHHHHHhcC-----CCcccCCCHHHHHHHHhhhc
Confidence            789999999999     99999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.98  E-value=2.4e-31  Score=232.81  Aligned_cols=225  Identities=22%  Similarity=0.251  Sum_probs=168.4

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .++++..+++|+|+||.||++.....  ..++..+++|.........  .+..|+. ++.++|+||+++++++...+.. 
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-   82 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL-   82 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce-
Confidence            46788899999999999999875432  2345789999887544332  6777888 9999999999999999887554 


Q ss_pred             EEEEeecCCCChhhHhhhcC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC
Q 046594          134 CLVFEFMQRGSLRWNLREKG--------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC  199 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~  199 (304)
                      +++|||+++|+|.+++....              ..+++..++.++.|++.||+|||+.   +++||||||+|||+++++
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~  159 (280)
T cd05092          83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGL  159 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCC
Confidence            99999999999999987653              1488999999999999999999654   899999999999999999


Q ss_pred             CeeEcccccccccCCCCC----Ccc---c-c-c-----Ccccc--ccccc--------C----CCCc-----ceeccccC
Q 046594          200 NAKLAGFGAANYCSGGSN----RRN---C-E-K-----TSEMA--EDIND--------F----VGGQ-----ECLDQRLY  246 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~----~~~---~-~-~-----~~~~s--~DV~S--------~----~~~~-----~~~~~~~~  246 (304)
                      .++|+|||++........    ...   . . .     ...++  +||||        +    ++..     +..+....
T Consensus       160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  239 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQ  239 (280)
T ss_pred             CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHc
Confidence            999999999875532211    000   0 0 0     12223  89999        1    1111     11111110


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      ......+..++..+.+++.+||+     .||++||++.++++.|+.
T Consensus       240 ~~~~~~~~~~~~~~~~li~~cl~-----~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         240 GRELERPRTCPPEVYAIMQGCWQ-----REPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             CccCCCCCCCCHHHHHHHHHHcc-----CChhhCCCHHHHHHHHhC
Confidence            00123344566889999999999     999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.98  E-value=2.6e-31  Score=229.07  Aligned_cols=216  Identities=22%  Similarity=0.281  Sum_probs=167.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|++.+.+|+|+||.||.+..     .+..+|+|..+.......+.+|+. ++.++|||++++++++... .. +++|
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~-~~v~   77 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY-----TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GL-YIVM   77 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc-----CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-Cc-EEEE
Confidence            46899999999999999998754     467899999976555556777777 9999999999999998764 44 9999


Q ss_pred             eecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++++|.+++..... .+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++.......
T Consensus        78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~  154 (254)
T cd05083          78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV  154 (254)
T ss_pred             ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence            99999999999986543 68999999999999999999965   489999999999999999999999999987654322


Q ss_pred             C--Ccccc-------cCcccc--cccccCC--------CCc------------ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          217 N--RRNCE-------KTSEMA--EDINDFV--------GGQ------------ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       217 ~--~~~~~-------~~~~~s--~DV~S~~--------~~~------------~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      .  .....       ..+.++  +||||++        .+.            .......   ....+...+..+.+++.
T Consensus       155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~  231 (254)
T cd05083         155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY---RMEPPEGCPADVYVLMT  231 (254)
T ss_pred             CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---CCCCCCcCCHHHHHHHH
Confidence            2  10000       022333  8999911        011            1111111   12233455678999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      +||+     .+|++||++.++++.|++
T Consensus       232 ~~l~-----~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         232 SCWE-----TEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHcC-----CChhhCcCHHHHHHHHcc
Confidence            9999     999999999999998863

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.98  E-value=5.4e-32  Score=241.86  Aligned_cols=205  Identities=19%  Similarity=0.162  Sum_probs=152.7

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----h-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----T-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.++   .+|+.||+|++......     . .+.++.. ++.++||||+++++++...+ .+++|||
T Consensus         1 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~-~~~lv~e   76 (323)
T cd05575           1 KVIGKGSFGKVLLAKHK---ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD-KLYFVLD   76 (323)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC-EEEEEEc
Confidence            46899999999999886   45799999998753221     1 3344444 78899999999999998874 4599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus        77 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  152 (323)
T cd05575          77 YVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKT  152 (323)
T ss_pred             CCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCc
Confidence            999999999988765 799999999999999999999654   899999999999999999999999999875432221 


Q ss_pred             -Cccccc----------Ccccc--cccccCC--------------CCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDINDFV--------------GGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S~~--------------~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||++              ...  +..+..+. .....+...+..+.+++.+||
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~li~~~l  231 (323)
T cd05575         153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN-KPLRLKPNISVSARHLLEGLL  231 (323)
T ss_pred             cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHh
Confidence             111222          22222  9999911              111  11111110 012234455788999999999


Q ss_pred             cccCCCCCCCCCCCHH
Q 046594          269 SCCSNIEGNENHPKIV  284 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~  284 (304)
                      +     .||.+||++.
T Consensus       232 ~-----~~p~~R~~~~  242 (323)
T cd05575         232 Q-----KDRTKRLGAK  242 (323)
T ss_pred             h-----cCHHhCCCCC
Confidence            9     9999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.98  E-value=2.6e-31  Score=229.85  Aligned_cols=217  Identities=21%  Similarity=0.234  Sum_probs=167.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ...|++.+.||+|+||.||++..+    +++.+|+|.+....... .+.+|+. +++++|+|++++++++..  ...+++
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~----~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v   78 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYN----GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ--EPIYII   78 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecC----CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEcc--CCcEEE
Confidence            567999999999999999998754    56889999988654433 7777887 999999999999998744  335999


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++....+ .+++.++..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDN  155 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence            999999999999876443 78999999999999999999965   48999999999999999999999999999766522


Q ss_pred             CCC---cccc---c-------Ccccc--cccccCC--------CCc---------c---eeccccCCCCCCcchHHHHHH
Q 046594          216 SNR---RNCE---K-------TSEMA--EDINDFV--------GGQ---------E---CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~~---~~~~---~-------~~~~s--~DV~S~~--------~~~---------~---~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ...   ...+   +       ....+  +||||++        .+.         +   .+....   ....+...+.++
T Consensus       156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  232 (260)
T cd05067         156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY---RMPRPDNCPEEL  232 (260)
T ss_pred             CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC---CCCCCCCCCHHH
Confidence            210   1110   0       12222  8999911        011         0   111111   123334456789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      .+++.+||.     .+|++|||+.++++.|+.
T Consensus       233 ~~li~~~l~-----~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         233 YELMRLCWK-----EKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHcc-----CChhhCCCHHHHHHHhhc
Confidence            999999999     999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.98  E-value=6.2e-32  Score=240.80  Aligned_cols=209  Identities=19%  Similarity=0.208  Sum_probs=153.8

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----h-HHHHHHHh-hCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----T-KLEEEILL-KSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~-~~~~e~~l-~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.+.+   .++.||+|.++.....     . .+.++..+ ...+||||+++++++...+ .+++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~-~~~lv~e   76 (316)
T cd05592           1 KVLGKGSFGKVMLAELKG---TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE-HLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC-EEEEEEc
Confidence            468999999999998864   4689999998754211     1 23333334 3558999999999998774 5599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus        77 ~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~  152 (316)
T cd05592          77 YLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK  152 (316)
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCc
Confidence            999999999998765 799999999999999999999764   899999999999999999999999999976432222 


Q ss_pred             -Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||              |....  +.... +......++...+..+.+++.+||
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~ll~~~l  231 (316)
T cd05592         153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS-ILNDRPHFPRWISKEAKDCLSKLF  231 (316)
T ss_pred             cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCHHHHHHHHHHc
Confidence             112222          12223  89999              11111  11111 100123345556778899999999


Q ss_pred             cccCCCCCCCCCCCHH-HHHH
Q 046594          269 SCCSNIEGNENHPKIV-DVLS  288 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~-~vl~  288 (304)
                      +     .||.+||++. ++++
T Consensus       232 ~-----~~P~~R~~~~~~l~~  247 (316)
T cd05592         232 E-----RDPTKRLGVDGDIRQ  247 (316)
T ss_pred             c-----CCHHHcCCChHHHHc
Confidence            9     9999999875 5554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.98  E-value=9e-33  Score=228.89  Aligned_cols=218  Identities=20%  Similarity=0.175  Sum_probs=173.3

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----------HHHHHHH-hhCC-CCCcccceeee
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----------KLEEEIL-LKSS-SHLNIVTLLGY  125 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----------~~~~e~~-l~~l-~h~niv~~~~~  125 (304)
                      ++.+|.-.+.+|+|..+.|-++.++.   .|..+|+|++.......          .-+.|+. |+++ .||+|+++.++
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~---t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~   91 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKE---TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV   91 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcc---cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence            45678889999999999998888874   46889999986433221          3345555 7776 89999999999


Q ss_pred             eeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          126 PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       126 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                      +..+ ..+++|+|.|+.|.|.|++...- .++++....|++|+.+|++|||.   ++|+||||||+|||++++.++||+|
T Consensus        92 yes~-sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isD  166 (411)
T KOG0599|consen   92 YESD-AFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISD  166 (411)
T ss_pred             ccCc-chhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEec
Confidence            9988 44599999999999999998876 79999999999999999999954   4899999999999999999999999


Q ss_pred             cccccccCCCCC-CcccccCcccc------------------ccccc-----------CCC-Cc--------ceeccccC
Q 046594          206 FGAANYCSGGSN-RRNCEKTSEMA------------------EDIND-----------FVG-GQ--------ECLDQRLY  246 (304)
Q Consensus       206 fgla~~~~~~~~-~~~~~~~~~~s------------------~DV~S-----------~~~-~~--------~~~~~~~~  246 (304)
                      ||+|..+..+.. ...||+++|.+                  .|+|+           -++ +.        .++.... 
T Consensus       167 FGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky-  245 (411)
T KOG0599|consen  167 FGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY-  245 (411)
T ss_pred             cceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc-
Confidence            999999998887 55566633332                  78888           111 11        2333333 


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ....+...+.+....+||.+||+     .||.+|.|++|++.|
T Consensus       246 qF~speWadis~~~KdLIsrlLq-----Vdp~~Ritake~LaH  283 (411)
T KOG0599|consen  246 QFRSPEWADISATVKDLISRLLQ-----VDPTKRITAKEALAH  283 (411)
T ss_pred             ccCCcchhhccccHHHHHHHHHe-----eCchhcccHHHHhcC
Confidence            11223335667889999999999     999999999999975

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=6.1e-32  Score=243.87  Aligned_cols=210  Identities=21%  Similarity=0.177  Sum_probs=164.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|+||.||++.+..   +++.||+|++.....     ...+.+|.. +..++||||+++++++.+++ .++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~   77 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKD---TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE-HLY   77 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECC---CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC-eEE
Confidence            68999999999999999998763   578999999875421     126677777 99999999999999998874 559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||.   .|++||||||+|||++.++.+||+|||++.....
T Consensus        78 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          78 LVMEYMPGGDLMNLLIRKD-VFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             EEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            9999999999999998774 79999999999999999999976   4899999999999999999999999999987654


Q ss_pred             CC------------------------------C-Cccccc----------Ccccc--ccccc--------------CCCC
Q 046594          215 GS------------------------------N-RRNCEK----------TSEMA--EDIND--------------FVGG  237 (304)
Q Consensus       215 ~~------------------------------~-~~~~~~----------~~~~s--~DV~S--------------~~~~  237 (304)
                      ..                              . ....++          ...++  +||||              |...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~  233 (350)
T cd05573         154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD  233 (350)
T ss_pred             cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence            43                              0 111222          12223  99999              1111


Q ss_pred             c------ceec--cccCCCCCCcch--HHHHHHHHHHHHhccccCCCCCCCCCCC-HHHHHHH
Q 046594          238 Q------ECLD--QRLYIPNEKFKI--TSLAKLGDIEKWCISCCSNIEGNENHPK-IVDVLSG  289 (304)
Q Consensus       238 ~------~~~~--~~~~~~~~~~~~--~~~~~l~~l~~~cl~~~~~~~dp~~Rps-~~~vl~~  289 (304)
                      .      .+..  ..+     .++.  ..+..+.+++.+|+.      ||.+||+ +.++++|
T Consensus       234 ~~~~~~~~i~~~~~~~-----~~p~~~~~~~~~~~li~~ll~------dp~~R~~s~~~ll~h  285 (350)
T cd05573         234 TLQETYNKIINWKESL-----RFPPDPPVSPEAIDLICRLLC------DPEDRLGSFEEIKSH  285 (350)
T ss_pred             CHHHHHHHHhccCCcc-----cCCCCCCCCHHHHHHHHHHcc------ChhhcCCCHHHHhcC
Confidence            1      1111  111     2222  247889999999998      8999999 9999986

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.98  E-value=1.1e-31  Score=244.30  Aligned_cols=214  Identities=17%  Similarity=0.132  Sum_probs=164.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .++..+|+|.+.....     ...+.+|+. ++.++||||+++++++.+. ..
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~-~~  117 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHK---SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD-KY  117 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC-CE
Confidence            568999999999999999999876   3578999999864321     114666777 9999999999999998877 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++...  .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~  192 (370)
T cd05596         118 LYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence            59999999999999998764  588999999999999999999764   8999999999999999999999999999766


Q ss_pred             CCCCC---Cccccc--------------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcc
Q 046594          213 SGGSN---RRNCEK--------------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       213 ~~~~~---~~~~~~--------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~  253 (304)
                      .....   ....++              ...++  +||||              |....      .+.....   ...++
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~---~~~~~  269 (370)
T cd05596         193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN---SLTFP  269 (370)
T ss_pred             cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC---cCCCC
Confidence            43221   111222              11233  89999              11111      2222111   11223


Q ss_pred             h--HHHHHHHHHHHHhccccCCCCCCCC--CCCHHHHHHH
Q 046594          254 I--TSLAKLGDIEKWCISCCSNIEGNEN--HPKIVDVLSG  289 (304)
Q Consensus       254 ~--~~~~~l~~l~~~cl~~~~~~~dp~~--Rps~~~vl~~  289 (304)
                      .  ..+..+.+++.+||+     .+|.+  |||+.++++|
T Consensus       270 ~~~~~s~~~~~li~~~L~-----~~p~r~~R~s~~ell~h  304 (370)
T cd05596         270 DDIEISKQAKDLICAFLT-----DREVRLGRNGVDEIKSH  304 (370)
T ss_pred             CcCCCCHHHHHHHHHHcc-----ChhhccCCCCHHHHhcC
Confidence            2  457889999999999     99987  9999999886

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=6.8e-32  Score=247.82  Aligned_cols=210  Identities=19%  Similarity=0.191  Sum_probs=169.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      +..|+.++.||+|.||.|+++..+++   ++.+|||+++....-.     ....|.. +... +||.+++++.+|+.. +
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~---~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~-~  442 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGT---NEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK-E  442 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCC---CcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC-C
Confidence            56899999999999999999999865   5899999998754221     3333333 3333 799999999999988 6


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ++|+||||+.||++..+.+..  .+++..+..|+..++.||.|||+.   |||+||||.+|||+|.+|.+||+|||+++.
T Consensus       443 ~l~fvmey~~Ggdm~~~~~~~--~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe  517 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLMHHIHTD--VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE  517 (694)
T ss_pred             eEEEEEEecCCCcEEEEEecc--cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence            779999999999965554433  799999999999999999999664   899999999999999999999999999997


Q ss_pred             cCCCC-C-CcccccCcccc------------ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          212 CSGGS-N-RRNCEKTSEMA------------EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       212 ~~~~~-~-~~~~~~~~~~s------------~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .-... . .+.+|++.+++            .|.|+              |+++.  +++|..+ .....+|...+.+..
T Consensus       518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~-~d~~~yP~~ls~ea~  596 (694)
T KOG0694|consen  518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV-NDEVRYPRFLSKEAI  596 (694)
T ss_pred             cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh-cCCCCCCCcccHHHH
Confidence            75332 2 67788844444            89999              55333  5666554 223457888999999


Q ss_pred             HHHHHhccccCCCCCCCCCCCH
Q 046594          262 DIEKWCISCCSNIEGNENHPKI  283 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~  283 (304)
                      +|+++.|.     +||++|--+
T Consensus       597 ~il~~ll~-----k~p~kRLG~  613 (694)
T KOG0694|consen  597 AIMRRLLR-----KNPEKRLGS  613 (694)
T ss_pred             HHHHHHhc-----cCcccccCC
Confidence            99999999     999999865

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.98  E-value=1.8e-31  Score=231.46  Aligned_cols=217  Identities=19%  Similarity=0.208  Sum_probs=155.9

Q ss_pred             cccCCccccceeeecceeec---------CCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           66 KSFGDSVEGLTLIKGDRAVS---------RNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~---------~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      +.||+|+||.||++......         .....+++|.+.......  .+.++.. ++.++||||+++++++...... 
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~-   79 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN-   79 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC-
Confidence            46899999999998743211         123468999877544332  6667777 9999999999999999887555 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC-------eeEccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN-------AKLAGF  206 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~-------~kl~Df  206 (304)
                      +++|||+++|+|..++......+++..++.++.|++.||+|||+   ++++||||||+|||++.++.       ++++||
T Consensus        80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~  156 (262)
T cd05077          80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDP  156 (262)
T ss_pred             EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence            99999999999999988765579999999999999999999954   58999999999999987664       899999


Q ss_pred             ccccccCCCCC-Cccccc--------Ccccc--cccccCC--------CCcceec-c------ccCCCCCCcchHHHHHH
Q 046594          207 GAANYCSGGSN-RRNCEK--------TSEMA--EDINDFV--------GGQECLD-Q------RLYIPNEKFKITSLAKL  260 (304)
Q Consensus       207 gla~~~~~~~~-~~~~~~--------~~~~s--~DV~S~~--------~~~~~~~-~------~~~~~~~~~~~~~~~~l  260 (304)
                      |++........ .....+        ...++  +||||++        .+..... .      .+..............+
T Consensus       157 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (262)
T cd05077         157 GIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPSCKEL  236 (262)
T ss_pred             CCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCCCChHHH
Confidence            99876543222 111110        12223  8999911        0100000 0      00000001112234678


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      .+++.+||+     .||++||++.+++++|+
T Consensus       237 ~~li~~cl~-----~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         237 ADLMTHCMN-----YDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHHHHHcC-----CChhhCcCHHHHHHhcC
Confidence            999999999     99999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.98  E-value=3e-32  Score=235.67  Aligned_cols=217  Identities=20%  Similarity=0.234  Sum_probs=159.4

Q ss_pred             cccCCccccceeeecceeecC----CCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSR----NLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~----~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++..+....    ....+++|........  +.+.++.. ++.++|||++++++++..++.. ++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~-~lv~e   79 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDES-IMVQE   79 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCc-EEEEe
Confidence            468999999999988754321    2356888888654333  25666667 9999999999999999887555 99999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC--------eeEccccccc
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN--------AKLAGFGAAN  210 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~--------~kl~Dfgla~  210 (304)
                      |+++|+|.+++...+..+++..+..++.|++.||+|||+   ++++||||||+||+++.++.        ++++|||++.
T Consensus        80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~  156 (258)
T cd05078          80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI  156 (258)
T ss_pred             cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence            999999999998766578999999999999999999965   48999999999999987765        6999999987


Q ss_pred             ccCCCCC-Cccccc--------Ccccc--cccccC--------CCCc---ceecc----ccCCCCCCcchHHHHHHHHHH
Q 046594          211 YCSGGSN-RRNCEK--------TSEMA--EDINDF--------VGGQ---ECLDQ----RLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       211 ~~~~~~~-~~~~~~--------~~~~s--~DV~S~--------~~~~---~~~~~----~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ....... .....+        ...++  +||||+        .+..   ...++    ........++......+.+++
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (258)
T cd05078         157 TVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWTELANLI  236 (258)
T ss_pred             ccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcHHHHHHH
Confidence            6544322 111111        12233  899991        1111   00000    000002234444557799999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      .+||+     .||++|||+.++++.|+
T Consensus       237 ~~~l~-----~~p~~Rps~~~il~~l~  258 (258)
T cd05078         237 NQCMD-----YEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHhc-----cChhhCCCHHHHHHhcC
Confidence            99999     99999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.98  E-value=7.5e-32  Score=241.59  Aligned_cols=211  Identities=16%  Similarity=0.150  Sum_probs=155.7

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch---h--HHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---T--KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~--~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.++.   +++.+|+|.+......   .  .+..|.. +.++ +||||+++++++...+ .+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-~~~lv~E   76 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKK---TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES-RLFFVIE   76 (329)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC-EEEEEEe
Confidence            468999999999998763   4689999999754211   1  4445555 5555 8999999999998874 4599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus        77 ~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~  152 (329)
T cd05618          77 YVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT  152 (329)
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc
Confidence            999999998887665 799999999999999999999764   899999999999999999999999999875422111 


Q ss_pred             -Cccccc----------Ccccc--ccccc-----------CCCCc-------------ceeccccCCCCCCcchHHHHHH
Q 046594          218 -RRNCEK----------TSEMA--EDIND-----------FVGGQ-------------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S-----------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                       ....++          ...++  +||||           ..+..             ..+..........+|...+..+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~  232 (329)
T cd05618         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA  232 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHH
Confidence             111222          12222  99999           11110             0000000001223556667888


Q ss_pred             HHHHHHhccccCCCCCCCCCCC------HHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPK------IVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps------~~~vl~~  289 (304)
                      .+++.+||.     .||++||+      +.++++|
T Consensus       233 ~~ll~~~L~-----~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         233 ASVLKSFLN-----KDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             HHHHHHHhc-----CCHHHcCCCCCCCCHHHHhcC
Confidence            999999999     99999998      4677765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.98  E-value=5.9e-32  Score=241.71  Aligned_cols=213  Identities=20%  Similarity=0.189  Sum_probs=157.9

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH----hhCCCCCcccceeeeeeCCCCc
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL----LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~----l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      |++.+.||+|+||.||++.++   .+++.||||+++....     ...+..|..    ++.++||||+++++++...+ .
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~-~   76 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYK---KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED-H   76 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-E
Confidence            678899999999999999876   3578999999975321     113333332    46778999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++|+|...+...  .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++..
T Consensus        77 ~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          77 VCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             EEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            59999999999999888653  699999999999999999999654   8999999999999999999999999998754


Q ss_pred             CCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ....++          ...++  +||||              |....  +..+... .....++...+..+.+
T Consensus       152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~  230 (324)
T cd05589         152 MGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV-NDEVRYPRFLSREAIS  230 (324)
T ss_pred             CCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hCCCCCCCCCCHHHHH
Confidence            32211  111122          22223  89999              11111  1111111 0012345556788899


Q ss_pred             HHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      ++.+||.     .||.+||     ++.+++++
T Consensus       231 li~~~L~-----~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         231 IMRRLLR-----RNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             HHHHHhh-----cCHhHcCCCCCCCHHHHhhC
Confidence            9999999     9999999     57777765

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=7.3e-32  Score=241.65  Aligned_cols=211  Identities=17%  Similarity=0.154  Sum_probs=156.0

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.++.   +++.||+|+++.....     ..+..|.. +..+ +||||+++++++...+ .+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~-~~~lv~e   76 (329)
T cd05588           1 RVIGRGSYAKVLLVELKK---TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES-RLFFVIE   76 (329)
T ss_pred             CeEeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC-EEEEEEe
Confidence            468999999999998763   5789999999754221     14555666 7777 7999999999998874 5599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC-C
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS-N  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~  217 (304)
                      |+++|+|.+++...+ .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++...... .
T Consensus        77 ~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~  152 (329)
T cd05588          77 FVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT  152 (329)
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCc
Confidence            999999999887665 79999999999999999999965   489999999999999999999999999987532211 1


Q ss_pred             -Cccccc----------Ccccc--ccccc-----------CCCCc-------------ceeccccCCCCCCcchHHHHHH
Q 046594          218 -RRNCEK----------TSEMA--EDIND-----------FVGGQ-------------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S-----------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                       ....++          ...++  +||||           ..+..             +.....+......+|...+..+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  232 (329)
T cd05588         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA  232 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHH
Confidence             112222          12222  89999           11110             0000000000123445566789


Q ss_pred             HHHHHHhccccCCCCCCCCCCC------HHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPK------IVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps------~~~vl~~  289 (304)
                      .+++.+||+     .||.+||+      +.++++|
T Consensus       233 ~~li~~~L~-----~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         233 SSVLKGFLN-----KDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             HHHHHHHhc-----cCHHHcCCCCCCCCHHHHhcC
Confidence            999999999     99999997      6788765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=4.2e-31  Score=228.99  Aligned_cols=223  Identities=19%  Similarity=0.186  Sum_probs=168.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.+|+|+||.||++.+.   .+++.+|+|.++....     ...+.+|+. +++++|+|++++++++...+ ..
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~-~~   77 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICL---LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN-EL   77 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEc---CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-eE
Confidence            47899999999999999999876   3578999998864221     226677777 99999999999999998874 45


Q ss_pred             EEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      +++|||+++|+|.+++...   ...+++.+++.++.|++.||+|||+.   |++||||+|+||+++.++.++|+|||++.
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~  154 (267)
T cd08224          78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGR  154 (267)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceee
Confidence            9999999999999988653   22689999999999999999999654   89999999999999999999999999987


Q ss_pred             ccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc----ceeccccCCCCCCcch-HHH
Q 046594          211 YCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ----ECLDQRLYIPNEKFKI-TSL  257 (304)
Q Consensus       211 ~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~----~~~~~~~~~~~~~~~~-~~~  257 (304)
                      .......  ....+.          ...++  +||||              +....    +..+..........+. ..+
T Consensus       155 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd08224         155 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYS  234 (267)
T ss_pred             eccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcC
Confidence            6543221  111111          11222  89999              11111    1111100000122232 556


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      ..+.+++.+||.     .+|++|||+.++++.|+++.
T Consensus       235 ~~~~~~i~~cl~-----~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         235 EELRDLVSRCIN-----PDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHHHHcC-----CCcccCCCHHHHHHHHHHhc
Confidence            789999999999     99999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.97  E-value=3.7e-31  Score=234.32  Aligned_cols=227  Identities=16%  Similarity=0.161  Sum_probs=170.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCC-CcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRN-LTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~-~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ...|+..+.||+|+||.||++........ ...+|+|.........   .+.+|.. ++.++||||+++++++... .. 
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~-   83 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI-   83 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc-
Confidence            45688899999999999999876532111 1367999887654332   5666777 9999999999999998764 34 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++++||+++|+|.+++......+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++...
T Consensus        84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110          84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEcccccccccc
Confidence            79999999999999998766578999999999999999999965   489999999999999999999999999998664


Q ss_pred             CCCC----Cccccc----------Ccccc--cccccCC--------CCc------------ceeccccCCCCCCcchHHH
Q 046594          214 GGSN----RRNCEK----------TSEMA--EDINDFV--------GGQ------------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       214 ~~~~----~~~~~~----------~~~~s--~DV~S~~--------~~~------------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ....    ....++          ...++  +||||++        .+.            +.+....   ....+..++
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  237 (303)
T cd05110         161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE---RLPQPPICT  237 (303)
T ss_pred             CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC---CCCCCCCCC
Confidence            3222    001011          12223  8999911        011            1111111   112233456


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+.+++.+||.     .+|++||++.++++.|+.+.+.+.
T Consensus       238 ~~~~~li~~c~~-----~~p~~Rp~~~~l~~~l~~~~~~~~  273 (303)
T cd05110         238 IDVYMVMVKCWM-----IDADSRPKFKELAAEFSRMARDPQ  273 (303)
T ss_pred             HHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHhchh
Confidence            788999999999     999999999999999999877654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=4.1e-31  Score=232.12  Aligned_cols=225  Identities=21%  Similarity=0.249  Sum_probs=167.8

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|+..+.+|+|+||.||++.+.+.  ..++..+|+|.+......   ..+.+|+. +++++||||+++++++..++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            35789999999999999999987542  235689999998765432   26777787 9999999999999999887555


Q ss_pred             eEEEEeecCCCChhhHhhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 046594          133 RCLVFEFMQRGSLRWNLREKG---------------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD  191 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~---------------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~  191 (304)
                       ++++||+++|+|.+++....                     ..+++..++.++.|++.||+|||+.   +++||||||+
T Consensus        84 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~  159 (288)
T cd05050          84 -CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR  159 (288)
T ss_pred             -EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence             99999999999999997532                     1478889999999999999999754   8999999999


Q ss_pred             CeeeCCCCCeeEcccccccccCCCCC----Ccccc---c-------Ccccc--cccccCC------------CCc-----
Q 046594          192 NILLDELCNAKLAGFGAANYCSGGSN----RRNCE---K-------TSEMA--EDINDFV------------GGQ-----  238 (304)
Q Consensus       192 Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~---~-------~~~~s--~DV~S~~------------~~~-----  238 (304)
                      ||+++.++.++|+|||++........    .....   +       ...++  +||||++            +..     
T Consensus       160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~  239 (288)
T cd05050         160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE  239 (288)
T ss_pred             heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999876533221    00000   0       12222  8999911            110     


Q ss_pred             ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          239 ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      +.............+...+..+.+++.+||+     .||++|||+.|+++.|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~-----~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         240 EVIYYVRDGNVLSCPDNCPLELYNLMRLCWS-----KLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcc-----cCcccCCCHHHHHHHhhC
Confidence            1000000000012234556789999999999     999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=1.7e-31  Score=244.00  Aligned_cols=143  Identities=20%  Similarity=0.125  Sum_probs=125.1

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .|+.++.||+|+||.||++.++   .+++.+|+|++......     ..+..|+. ++.++||||+++++++.+.+ .++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-~~~   77 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKV---DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-NLY   77 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-EEE
Confidence            5788999999999999999876   35789999999754311     15667777 99999999999999998874 559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      +||||+++|+|.+++.... .+++..+..++.|++.||+|||.   .+|+||||||+|||++.++++||+|||+++.
T Consensus        78 lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~  150 (381)
T cd05626          78 FVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence            9999999999999998766 79999999999999999999965   4899999999999999999999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=1.7e-31  Score=242.01  Aligned_cols=146  Identities=27%  Similarity=0.308  Sum_probs=121.9

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC--
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL--  130 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~--  130 (304)
                      +.++|++.+.||+|+||.||++.+.   ..|..+|+|.+......    ..+.+|+. ++.++||||+++++++....  
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   95 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDT---VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL   95 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEc---CCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc
Confidence            4689999999999999999999876   35789999998653221    25556666 99999999999999986543  


Q ss_pred             ---CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          131 ---QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       131 ---~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                         ..+|+||||+++ +|.+.+..   .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg  168 (359)
T cd07876          96 EEFQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG  168 (359)
T ss_pred             cccceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence               235999999976 67766643   588999999999999999999654   89999999999999999999999999


Q ss_pred             cccccC
Q 046594          208 AANYCS  213 (304)
Q Consensus       208 la~~~~  213 (304)
                      +++...
T Consensus       169 ~a~~~~  174 (359)
T cd07876         169 LARTAC  174 (359)
T ss_pred             Cccccc
Confidence            997653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=1.9e-31  Score=238.99  Aligned_cols=213  Identities=18%  Similarity=0.119  Sum_probs=163.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----h-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----Q-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|+||.||++.++   .+++.+|+|+++....    . ..+.+|+. ++.++|+||+++++++.+.+ .++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~-~~~   77 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREK---ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD-NLY   77 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-eEE
Confidence            6889999999999999999876   3578999999986432    1 16677777 88899999999999988774 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601          78 LVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             EEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence            99999999999999988755899999999999999999999654   899999999999999999999999999987644


Q ss_pred             CCC---Cccccc----------------Ccccc--cccccCC--------------CCc------ceeccccCCCCCCcc
Q 046594          215 GSN---RRNCEK----------------TSEMA--EDINDFV--------------GGQ------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       215 ~~~---~~~~~~----------------~~~~s--~DV~S~~--------------~~~------~~~~~~~~~~~~~~~  253 (304)
                      ...   ....++                ...++  +||||++              ...      .+.....   ...++
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~  231 (330)
T cd05601         155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR---FLKFP  231 (330)
T ss_pred             CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC---ccCCC
Confidence            322   111111                11122  8999911              111      1111110   01122


Q ss_pred             --hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 --ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 --~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                        ...+..+.+++.+|+.      +|.+|||+.++++|
T Consensus       232 ~~~~~~~~~~~li~~ll~------~p~~R~t~~~l~~h  263 (330)
T cd05601         232 EDPKVSSDFLDLIQSLLC------GQKERLGYEGLCCH  263 (330)
T ss_pred             CCCCCCHHHHHHHHHHcc------ChhhCCCHHHHhCC
Confidence              2356778999999988      89999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.97  E-value=5.6e-31  Score=227.90  Aligned_cols=220  Identities=21%  Similarity=0.221  Sum_probs=165.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|++|.||++.+.+    +..+|+|........ ..+.+|+. +++++|+|++++++++... . .+++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~----~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~-~~~v   78 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNG----TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE-P-IYIV   78 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcC----CceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-C-cEEE
Confidence            3679999999999999999987643    356999988754433 36677777 9999999999999987543 4 4899


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++|+|.+++..... .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDN  155 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence            999999999999976543 589999999999999999999654   8999999999999999999999999999866433


Q ss_pred             CC---Cccccc----------Ccccc--cccccC--------CCCc---------ceeccccCCCCCCcchHHHHHHHHH
Q 046594          216 SN---RRNCEK----------TSEMA--EDINDF--------VGGQ---------ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       216 ~~---~~~~~~----------~~~~s--~DV~S~--------~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ..   ....++          ....+  +||||+        ..+.         +.............+...+..+.++
T Consensus       156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  235 (260)
T cd05069         156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHEL  235 (260)
T ss_pred             cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHH
Confidence            22   111111          12233  899991        1011         1101000000123344567889999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      +.+||.     .||++||++.++++.|+.
T Consensus       236 i~~~l~-----~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         236 MKLCWK-----KDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHcc-----CCcccCcCHHHHHHHHhc
Confidence            999999     999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.97  E-value=6.5e-32  Score=241.78  Aligned_cols=143  Identities=20%  Similarity=0.180  Sum_probs=127.2

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      |++++.||+|+||.||+|+-+.   .|..+|+|+++......     ..+.|.. |....+|+||+++..|++. ..+||
T Consensus       143 Fe~Lk~IgkGAfGeVrLarKk~---Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~-~~LYL  218 (550)
T KOG0605|consen  143 FELLKVIGKGAFGEVRLARKKD---TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK-EYLYL  218 (550)
T ss_pred             chhheeeccccceeEEEEEEcc---CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC-CeeEE
Confidence            6668899999999999999885   47999999998765443     4555666 8889999999999999998 55699


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ||||++||++..+|...+ .|++..+..++.+++-|++-+|+.   |+|||||||+|+|||..|++||+||||+..+
T Consensus       219 iMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             EEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence            999999999999999887 899999999999999999999664   9999999999999999999999999998643

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.97  E-value=5.6e-31  Score=226.29  Aligned_cols=210  Identities=20%  Similarity=0.216  Sum_probs=161.9

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++..    .++..+|+|..+......   .+.+|+. ++.++||||+++++++...+.. ++||||++
T Consensus         1 ~~ig~g~~g~vy~~~~----~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~lv~e~~~   75 (250)
T cd05085           1 ELLGKGNFGEVFKGTL----KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPI-YIVMELVP   75 (250)
T ss_pred             CccCCCCCceEEEEEe----cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCcc-EEEEECCC
Confidence            3689999999998864    356899999987654432   5667777 9999999999999999887554 99999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-C-c
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-R-R  219 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~-~  219 (304)
                      +++|.+++......+++..+..++.|++.||.|||.   .+++||||||+||+++.++.++|+|||++........ . .
T Consensus        76 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  152 (250)
T cd05085          76 GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG  152 (250)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCC
Confidence            999999998765578999999999999999999965   4899999999999999999999999999875433221 0 0


Q ss_pred             -cc-----c-----cCcccc--cccccC--------C----CCc-----c---eeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          220 -NC-----E-----KTSEMA--EDINDF--------V----GGQ-----E---CLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       220 -~~-----~-----~~~~~s--~DV~S~--------~----~~~-----~---~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                       ..     .     ..+..+  +||||+        .    +..     .   .+....   ....+...+..+.+++.+
T Consensus       153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~  229 (250)
T cd05085         153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY---RMSCPQKCPDDVYKVMQR  229 (250)
T ss_pred             CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHH
Confidence             00     0     022233  899991        1    110     0   011111   223445567889999999


Q ss_pred             hccccCCCCCCCCCCCHHHHHHHHH
Q 046594          267 CISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       267 cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      ||.     .+|++||++.++++.|.
T Consensus       230 ~l~-----~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         230 CWD-----YKPENRPKFSELQKELA  249 (250)
T ss_pred             Hcc-----cCcccCCCHHHHHHHhc
Confidence            999     99999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=1e-31  Score=239.76  Aligned_cols=205  Identities=17%  Similarity=0.131  Sum_probs=152.1

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----h-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----T-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.+.   .+++.+|+|++......     . .+.++.. ++.++||||+++++++.+.+ .+|+|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~-~~~lv~e   76 (321)
T cd05603           1 KVIGKGSFGKVLLAKRK---SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE-KLYFVLD   76 (321)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-EEEEEEc
Confidence            46899999999999876   45789999998753221     1 3344444 78899999999999988774 4599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+.+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus        77 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  152 (321)
T cd05603          77 YVNGGELFFHLQRER-CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET  152 (321)
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCc
Confidence            999999998887655 789999999999999999999654   899999999999999999999999999875422221 


Q ss_pred             -Cccccc----------Ccccc--cccccCC-----------C---Cc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDINDFV-----------G---GQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S~~-----------~---~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||++           +   ..  ...+... .....++...+..+.+++.+||
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~l  231 (321)
T cd05603         153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL-HKPLQLPGGKTVAACDLLVGLL  231 (321)
T ss_pred             cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHc
Confidence             111222          12223  9999911           1   11  1111111 0112344556778999999999


Q ss_pred             cccCCCCCCCCCCCHH
Q 046594          269 SCCSNIEGNENHPKIV  284 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~  284 (304)
                      +     .||.+||++.
T Consensus       232 ~-----~~p~~R~~~~  242 (321)
T cd05603         232 H-----KDQRRRLGAK  242 (321)
T ss_pred             c-----CCHhhcCCCC
Confidence            9     9999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=1.7e-31  Score=241.71  Aligned_cols=149  Identities=25%  Similarity=0.312  Sum_probs=123.1

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC-
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL-  130 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~-  130 (304)
                      .+.++|++.+.||+|+||.||++.+..   .++.+|+|++......    ..+.+|+. ++.++||||+++++++.... 
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   90 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKS   90 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecC---CCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccc
Confidence            346899999999999999999998753   4689999998754322    14555666 99999999999999886432 


Q ss_pred             ----CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          131 ----QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       131 ----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                          ..+++||||+++ +|.+.+..   .+++..+..++.|++.||+|||+   .||+||||||+|||++.++.+||+||
T Consensus        91 ~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Df  163 (355)
T cd07874          91 LEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF  163 (355)
T ss_pred             ccccceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeC
Confidence                245999999976 77777654   58899999999999999999965   48999999999999999999999999


Q ss_pred             ccccccCCC
Q 046594          207 GAANYCSGG  215 (304)
Q Consensus       207 gla~~~~~~  215 (304)
                      |+++.....
T Consensus       164 g~~~~~~~~  172 (355)
T cd07874         164 GLARTAGTS  172 (355)
T ss_pred             cccccCCCc
Confidence            999876443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=1.1e-31  Score=239.70  Aligned_cols=210  Identities=19%  Similarity=0.147  Sum_probs=154.0

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.++   .+++.||+|++.....     ...+..|.. +..+ +||||+++++++...+ .+|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-~~~iv~E   76 (320)
T cd05590           1 RVLGKGSFGKVMLARLK---ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD-RLFFVME   76 (320)
T ss_pred             CeeeeCCCeEEEEEEEc---CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC-EEEEEEc
Confidence            46899999999999876   3578999999875321     113333444 5544 7999999999998874 4599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++....... 
T Consensus        77 y~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~  152 (320)
T cd05590          77 FVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT  152 (320)
T ss_pred             CCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc
Confidence            999999999988765 799999999999999999999654   899999999999999999999999999876422211 


Q ss_pred             -Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||              |....  ++..... .....++...+..+.+++.+||
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~L  231 (320)
T cd05590         153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL-NDEVVYPTWLSQDAVDILKAFM  231 (320)
T ss_pred             ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHc
Confidence             112222          12222  89999              11111  1111111 0012334456678899999999


Q ss_pred             cccCCCCCCCCCCCH------HHHHHH
Q 046594          269 SCCSNIEGNENHPKI------VDVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~------~~vl~~  289 (304)
                      +     .||++||++      .++++|
T Consensus       232 ~-----~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         232 T-----KNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             c-----cCHHHCCCCCCCCCHHHHHcC
Confidence            9     999999998      666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=4.2e-32  Score=248.87  Aligned_cols=215  Identities=20%  Similarity=0.207  Sum_probs=177.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .-++.++||+|.||.|+.+.++....+-..||||.++.....   +.|..|+. |.+|+|+|++++||+..+. .- .+|
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q-p~-mMV  188 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ-PA-MMV  188 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc-hh-hHH
Confidence            446678899999999999998765444467999999876654   27777777 9999999999999999874 44 899


Q ss_pred             EeecCCCChhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      +|.++.|+|.+.|+.. ...|.......|+.|||.||.||   ..+++|||||..+|+|+....++||+||||.+.+...
T Consensus       189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YL---eskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYL---ESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN  265 (1039)
T ss_pred             hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence            9999999999999983 33888999999999999999999   6678999999999999999999999999999988776


Q ss_pred             CCCccccc---------------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHH
Q 046594          216 SNRRNCEK---------------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       216 ~~~~~~~~---------------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~  258 (304)
                      ...-..+.               .+.++  +|||+        |..++            +.+|..-   +-.-|..|++
T Consensus       266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e---rLpRPk~cse  342 (1039)
T KOG0199|consen  266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE---RLPRPKYCSE  342 (1039)
T ss_pred             CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc---cCCCCCCChH
Confidence            65111111               45555  99999        33333            4455444   5567789999


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      +++++++.||.     .+|++|||+..|.+
T Consensus       343 dIY~imk~cWa-----h~paDRptFsair~  367 (1039)
T KOG0199|consen  343 DIYQIMKNCWA-----HNPADRPTFSAIRE  367 (1039)
T ss_pred             HHHHHHHHhcc-----CCccccccHHHHHH
Confidence            99999999999     99999999999974

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.97  E-value=3.9e-31  Score=234.73  Aligned_cols=147  Identities=19%  Similarity=0.187  Sum_probs=127.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .|++.+.||+|+||.||++.+..   ++..+|+|.+.......   .+..|+. +++++||||+++++++..++ .++++
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv   77 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRP---SGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG-EISIC   77 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcC---CCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-EEEEE
Confidence            58899999999999999998763   46889999987653332   5667777 99999999999999998874 55999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |||+++++|.+++.... .+++..+..++.|++.||+|||+.  .+++||||||+|||++.++.++|+|||++.....
T Consensus        78 ~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (308)
T cd06615          78 MEHMDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  152 (308)
T ss_pred             eeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence            99999999999998765 799999999999999999999853  2799999999999999999999999999876543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=1.4e-31  Score=238.98  Aligned_cols=210  Identities=18%  Similarity=0.140  Sum_probs=154.9

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.++.   .++.+|+|++......     ..+..|.. +..+ +||||+++++++...+ .+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~-~~~lv~E   76 (321)
T cd05591           1 KVLGKGSFGKVMLAELKG---TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD-RLFFVME   76 (321)
T ss_pred             CccccCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-eEEEEEe
Confidence            468999999999998763   4689999998754211     13334444 5544 8999999999998874 4599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|...+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++........ 
T Consensus        77 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  152 (321)
T cd05591          77 YVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT  152 (321)
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcc
Confidence            999999999887765 799999999999999999999764   899999999999999999999999999875432221 


Q ss_pred             -Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||              |....  +...... .....++...+..+.+++.+||
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~ll~~~L  231 (321)
T cd05591         153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL-HDDVLYPVWLSKEAVSILKAFM  231 (321)
T ss_pred             ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHh
Confidence             111222          11222  89999              11111  1111111 0011234445678899999999


Q ss_pred             cccCCCCCCCCCC-------CHHHHHHH
Q 046594          269 SCCSNIEGNENHP-------KIVDVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rp-------s~~~vl~~  289 (304)
                      +     .||++||       ++.++++|
T Consensus       232 ~-----~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         232 T-----KNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             c-----cCHHHcCCCCCCCCCHHHHhcC
Confidence            9     9999999       88888866

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=1.2e-31  Score=238.89  Aligned_cols=210  Identities=20%  Similarity=0.207  Sum_probs=153.8

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hh-CCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LK-SSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~-~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.++.   +|+.+|+|.++....     ...+..|.. +. ..+||||+++++++... +.+|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-~~~~lv~E   76 (316)
T cd05620           1 KVLGKGSFGKVLLAELKG---KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK-EHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC-CEEEEEEC
Confidence            468999999999998864   578999999975421     113333333 54 45899999999999887 45599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.++|+|||+++....... 
T Consensus        77 ~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05620          77 FLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR  152 (316)
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCc
Confidence            999999999987765 789999999999999999999664   899999999999999999999999999875322111 


Q ss_pred             -Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||              |....  +... .+......++...+..+.+++.+||
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l  231 (316)
T cd05620         153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFE-SIRVDTPHYPRWITKESKDILEKLF  231 (316)
T ss_pred             eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCCCCCCCCCHHHHHHHHHHc
Confidence             111222          12223  89999              11111  1111 1101122344456678999999999


Q ss_pred             cccCCCCCCCCCCCHH-HHHHH
Q 046594          269 SCCSNIEGNENHPKIV-DVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~-~vl~~  289 (304)
                      +     .||++||++. ++++|
T Consensus       232 ~-----~dP~~R~~~~~~~~~h  248 (316)
T cd05620         232 E-----RDPTRRLGVVGNIRGH  248 (316)
T ss_pred             c-----CCHHHcCCChHHHHcC
Confidence            9     9999999984 66543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=1.1e-31  Score=239.95  Aligned_cols=208  Identities=19%  Similarity=0.158  Sum_probs=153.8

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----h-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----T-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.+.   .+++.+|+|++......     . .+.++.. ++.++||||+++++++...+. +++|||
T Consensus         1 ~~lg~G~fg~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~-~~lv~e   76 (325)
T cd05602           1 KVIGKGSFGKVLLARHK---AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK-LYFVLD   76 (325)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCe-EEEEEe
Confidence            46899999999999876   35689999998753211     1 3334444 788999999999999988744 599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+.+..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++....... 
T Consensus        77 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~  152 (325)
T cd05602          77 YINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGT  152 (325)
T ss_pred             CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCC
Confidence            999999999998765 788999999999999999999654   899999999999999999999999999875432221 


Q ss_pred             -Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||              |....  +..+... .....++...+..+.+++.+||
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~l  231 (325)
T cd05602         153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-NKPLQLKPNITNSARHLLEGLL  231 (325)
T ss_pred             cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH-hCCcCCCCCCCHHHHHHHHHHc
Confidence             112222          22222  99999              11111  1111111 0012334456788999999999


Q ss_pred             cccCCCCCCCCCCCHHHHH
Q 046594          269 SCCSNIEGNENHPKIVDVL  287 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~vl  287 (304)
                      +     .||.+||++.+.+
T Consensus       232 ~-----~~p~~R~~~~~~~  245 (325)
T cd05602         232 Q-----KDRTKRLGAKDDF  245 (325)
T ss_pred             c-----cCHHHCCCCCCCH
Confidence            9     9999999887433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.97  E-value=2.8e-31  Score=228.68  Aligned_cols=216  Identities=18%  Similarity=0.203  Sum_probs=164.9

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      |...+.+|+|++|.||++..+   .++..+++|.+......    ..+..|+. ++.++|||++++++++...+ ..++|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv   77 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRK---ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG-KLNIV   77 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEc---CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC-EEEEE
Confidence            677889999999999999876   35789999998753221    26666777 99999999999999998874 45999


Q ss_pred             EeecCCCChhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++... ...+++..++.++.|++.||.|||+   .+++||||||+||+++.++.++|+|||+++.....
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence            9999999999999875 3379999999999999999999965   48999999999999999999999999998876543


Q ss_pred             CC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ..  ....+.          ....+  +||||              +....  ..............+......+.+++.
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  234 (256)
T cd08529         155 TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLID  234 (256)
T ss_pred             cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHH
Confidence            32  111111          12222  99999              11111  111111100012334456678999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +||+     .+|++||++.+++++
T Consensus       235 ~~l~-----~~p~~Rp~~~~ll~~  253 (256)
T cd08529         235 QCLT-----KDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHcc-----CCcccCcCHHHHhhC
Confidence            9999     999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=2.9e-31  Score=241.38  Aligned_cols=214  Identities=15%  Similarity=0.133  Sum_probs=163.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++.   +++.+|+|.+.....     ...+.+|+. ++.++||||+++++++.++ ..
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~-~~  117 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKS---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD-KY  117 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CE
Confidence            4689999999999999999998863   478999999864221     125667777 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++|+|.+++...  .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceec
Confidence            59999999999999999765  589999999999999999999654   8999999999999999999999999999876


Q ss_pred             CCCCC---Cccccc--------------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcc
Q 046594          213 SGGSN---RRNCEK--------------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       213 ~~~~~---~~~~~~--------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~  253 (304)
                      .....   ....++              .+.++  +||||              |....      .+.+...   ...++
T Consensus       193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~---~~~~p  269 (370)
T cd05621         193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN---SLNFP  269 (370)
T ss_pred             ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc---ccCCC
Confidence            43221   111222              11233  99999              11111      2222211   12223


Q ss_pred             h--HHHHHHHHHHHHhccccCCCCCCCC--CCCHHHHHHH
Q 046594          254 I--TSLAKLGDIEKWCISCCSNIEGNEN--HPKIVDVLSG  289 (304)
Q Consensus       254 ~--~~~~~l~~l~~~cl~~~~~~~dp~~--Rps~~~vl~~  289 (304)
                      .  ..+..+.+++.+|+.     .++.+  |+++.++++|
T Consensus       270 ~~~~~s~~~~~li~~~L~-----~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         270 EDVEISKHAKNLICAFLT-----DREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CcccCCHHHHHHHHHHcc-----CchhccCCCCHHHHhcC
Confidence            2  346778899999998     66544  9999999987

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=2.1e-31  Score=233.27  Aligned_cols=209  Identities=17%  Similarity=0.102  Sum_probs=156.5

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      ||+|+||.||++.++   .+++.+|+|.+......     ..+..|+. ++.++|+||+++.+++.... .+++||||++
T Consensus         1 lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~lv~e~~~   76 (280)
T cd05608           1 LGKGGFGEVSACQMR---ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT-DLCLVMTIMN   76 (280)
T ss_pred             CCCCCceeEEEEEEc---cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC-eEEEEEeCCC
Confidence            699999999999876   35789999998754322     14455666 99999999999999988774 4599999999


Q ss_pred             CCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          142 RGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       142 ~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      +|+|.+.+...   ...+++..++.++.|++.||+|||+.   +|+||||||+||+++.++.++|+|||++........ 
T Consensus        77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~  153 (280)
T cd05608          77 GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK  153 (280)
T ss_pred             CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc
Confidence            99999887542   23689999999999999999999754   899999999999999999999999999976544322 


Q ss_pred             -Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          218 -RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                       ....++          ...++  +||||              |....      ....... .....++...+..+.+++
T Consensus       154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li  232 (280)
T cd05608         154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL-NDSVTYPDKFSPASKSFC  232 (280)
T ss_pred             ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc-ccCCCCcccCCHHHHHHH
Confidence             111111          22222  99999              11111      1111111 011234455678899999


Q ss_pred             HHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      .+||+     .||++||     ++.++++|
T Consensus       233 ~~~l~-----~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         233 EALLA-----KDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             HHHhc-----CCHHHhcCCCCCCHHHHhcC
Confidence            99999     9999999     77888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=8.3e-31  Score=228.13  Aligned_cols=216  Identities=21%  Similarity=0.210  Sum_probs=159.4

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEeec
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      +.+|+|+||.||++..+... ....+++|..+.....   ..+..|+. ++++ +||||+++++++...+.. +++|||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~-~lv~e~~   78 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL-YLAIEYA   78 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCC-CeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCc-eEEEEeC
Confidence            35899999999999875321 1135788888753322   25667777 8888 899999999999887554 9999999


Q ss_pred             CCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          141 QRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       141 ~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                      ++|+|.+++....               ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~d  155 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIAD  155 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECC
Confidence            9999999987542               147899999999999999999975   4899999999999999999999999


Q ss_pred             cccccccCCCCC-C---cc--ccc-----Ccccc--cccccCC--------CCc------------ceeccccCCCCCCc
Q 046594          206 FGAANYCSGGSN-R---RN--CEK-----TSEMA--EDINDFV--------GGQ------------ECLDQRLYIPNEKF  252 (304)
Q Consensus       206 fgla~~~~~~~~-~---~~--~~~-----~~~~s--~DV~S~~--------~~~------------~~~~~~~~~~~~~~  252 (304)
                      ||++........ .   ..  ...     ....+  +||||++        .+.            ..+....   ..+.
T Consensus       156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---~~~~  232 (270)
T cd05047         156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---RLEK  232 (270)
T ss_pred             CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC---CCCC
Confidence            999863321111 0   00  000     11222  8999911        111            0111111   1223


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      +...+..+.+++.+||.     .||.+|||+.++++.|+++.
T Consensus       233 ~~~~~~~~~~li~~~l~-----~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         233 PLNCDDEVYDLMRQCWR-----EKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CCcCCHHHHHHHHHHcc-----cChhhCCCHHHHHHHHHHhh
Confidence            44456789999999999     99999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.97  E-value=5e-31  Score=227.37  Aligned_cols=218  Identities=17%  Similarity=0.162  Sum_probs=164.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .|++.+.+|+|++|.||.+..+   .+++.+|+|.+......    ..+.+|+. +++++|+|++++++.+...+..+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~l   77 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHR---TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYI   77 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEc---CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEE
Confidence            4889999999999999999876   34689999998654321    15667777 9999999999999988765566699


Q ss_pred             EEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +|||+++++|.+++.... ..+++.++..++.|++.|++|||+.   +++||||||+||+++.++.++|+|||++.....
T Consensus        78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence            999999999999998643 3689999999999999999999654   899999999999999999999999999976643


Q ss_pred             CCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          215 GSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       215 ~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ...  ....++          ....+  +||||              +....  ..............+...+..+.+++
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  234 (257)
T cd08223         155 QCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELI  234 (257)
T ss_pred             cCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHH
Confidence            221  111111          12222  89999              11111  11111110001234455668899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||+     .||++|||+.+++++
T Consensus       235 ~~~l~-----~~p~~Rp~~~~~l~~  254 (257)
T cd08223         235 ATMLS-----KRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHhc-----cCcccCCCHHHHhcC
Confidence            99999     999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.97  E-value=3.2e-31  Score=230.11  Aligned_cols=218  Identities=18%  Similarity=0.181  Sum_probs=163.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.+|+|.++......  .+.+|+. ++.++||||+++++.+...+. +++
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~-~~l   83 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNV---NTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDK-LWI   83 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEc---CCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE-EEE
Confidence            357899999999999999999875   346899999987654333  5666777 999999999999999988744 499


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ++||+++++|.+++...+ .+++.++..++.|++.||+|||+.   +++|+||||+||+++.++.++|+|||++......
T Consensus        84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd06645          84 CMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT  159 (267)
T ss_pred             EEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence            999999999999988766 799999999999999999999764   8999999999999999999999999998755322


Q ss_pred             CC--Cccccc-------------Ccccc--ccccc-----------CCCCc------ce---eccccCCCCCCcchHHHH
Q 046594          216 SN--RRNCEK-------------TSEMA--EDIND-----------FVGGQ------EC---LDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       216 ~~--~~~~~~-------------~~~~s--~DV~S-----------~~~~~------~~---~~~~~~~~~~~~~~~~~~  258 (304)
                      ..  ....++             ...++  +||||           ..+..      ..   .......+........+.
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06645         160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSN  239 (267)
T ss_pred             ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCH
Confidence            11  000111             11122  89999           11100      00   001110000001112346


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+.+++.+||.     .||++|||+.++++|
T Consensus       240 ~~~~li~~~l~-----~~P~~R~~~~~ll~~  265 (267)
T cd06645         240 SFHHFVKMALT-----KNPKKRPTAEKLLQH  265 (267)
T ss_pred             HHHHHHHHHcc-----CCchhCcCHHHHhcC
Confidence            78899999999     999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.9e-31  Score=228.11  Aligned_cols=221  Identities=20%  Similarity=0.170  Sum_probs=169.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.+|+|+||.||++...    ++..+|+|.+...... ..+.+|+. +++++|+||+++++++..... ++++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~----~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~~v   79 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN----GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEP-IYIV   79 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc----CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCc-eEEE
Confidence            468999999999999999998754    3478999998865443 37778888 999999999999999887644 4999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++.... ..+++..+..++.|++.||+|||+.   +++|+||||+||+++.++.++|+|||++......
T Consensus        80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~  156 (261)
T cd05034          80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD  156 (261)
T ss_pred             EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence            99999999999998754 3789999999999999999999654   7999999999999999999999999998766432


Q ss_pred             CC---Ccc----ccc------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHHHHH
Q 046594          216 SN---RRN----CEK------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       216 ~~---~~~----~~~------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ..   ...    ...      ....+  +||||        ...+.         ...+..........+...+..+.++
T Consensus       157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (261)
T cd05034         157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDL  236 (261)
T ss_pred             hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence            21   000    000      12233  89999        11111         1111111000123334456789999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      +.+||.     .+|++||+++++.+.|+.
T Consensus       237 i~~~l~-----~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         237 MLQCWD-----KDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHcc-----cCcccCCCHHHHHHHHhc
Confidence            999999     999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.97  E-value=8.7e-31  Score=225.85  Aligned_cols=217  Identities=18%  Similarity=0.175  Sum_probs=163.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +|++.+.+|+|+||.||++.+..   ++..+|+|.++......   .+..|.. ++.++|+||+++++.+..+ ..++++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv   76 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVN---SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD-GHLYIV   76 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcC---CCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC-CEEEEE
Confidence            47889999999999999998763   57899999986543222   5666777 9999999999999999877 455999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++|+|.+++.... ..+++...+.++.|++.||.|||+   .+++|+||||+||+++.++.++++|||++......
T Consensus        77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  153 (255)
T cd08219          77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP  153 (255)
T ss_pred             EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence            99999999999887543 368999999999999999999965   48999999999999999999999999998766432


Q ss_pred             CC--Cccccc----------Ccccc--cccccCC-----------C---Cc--ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDINDFV-----------G---GQ--ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S~~-----------~---~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ..  ....+.          ....+  +||||++           +   ..  ..............+...+..+.+++.
T Consensus       154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  233 (255)
T cd08219         154 GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIK  233 (255)
T ss_pred             ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHH
Confidence            21  111111          11222  8999911           1   10  000000000012234455677899999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +||+     .||++|||+.+++..
T Consensus       234 ~~l~-----~~P~~Rp~~~~il~~  252 (255)
T cd08219         234 QMFK-----RNPRSRPSATTILSR  252 (255)
T ss_pred             HHHh-----CCcccCCCHHHHhhc
Confidence            9999     999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.97  E-value=6e-31  Score=226.82  Aligned_cols=217  Identities=22%  Similarity=0.242  Sum_probs=167.4

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++........+..+++|.+......   ..+.+|+. ++.++|+|++++++++... ..++++|||++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv~e~~~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE-EPLYLVLEYME   79 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC-CceEEEEEecc
Confidence            4689999999999988643233689999999876553   37777887 9999999999999999886 45599999999


Q ss_pred             CCChhhHhhhc--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          142 RGSLRWNLREK--------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       142 ~gsL~~~l~~~--------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +++|.+++...        ...+++..++.++.|++.||+|||+   .+++||||||+||+++.++.++|+|||.+....
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  156 (262)
T cd00192          80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY  156 (262)
T ss_pred             CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEcccccccccc
Confidence            99999999886        3489999999999999999999965   589999999999999999999999999998776


Q ss_pred             CCCC----Cccccc----------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ....    ....++          ...++  +||||        ...+.         +..+..........+...+..+
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (262)
T cd00192         157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDEL  236 (262)
T ss_pred             cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHH
Confidence            5321    111111          12223  89999        11111         1111110001234455667889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      .+++.+||.     .||.+|||+.|++++|+
T Consensus       237 ~~li~~~l~-----~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         237 YELMLSCWQ-----LDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHHcc-----CCcccCcCHHHHHHhhC
Confidence            999999999     99999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=2.1e-31  Score=236.52  Aligned_cols=147  Identities=23%  Similarity=0.293  Sum_probs=125.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +.+|++.+.||+|+||.||++.++.   .+..+|+|.++......   .+.+|+. +++++||||+++++++..++. .+
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~   80 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKS-LT   80 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecC---CCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCe-EE
Confidence            3579999999999999999998763   46899999987543322   4556777 999999999999999988744 59


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +||||+++ +|.+++...+..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++....
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          81 LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKS  155 (309)
T ss_pred             EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecC
Confidence            99999976 8988887766578999999999999999999965   489999999999999999999999999987643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=1.6e-31  Score=238.97  Aligned_cols=215  Identities=17%  Similarity=0.159  Sum_probs=157.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCC-cccceeeeeeCCCCce
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHL-NIVTLLGYPQDGLQRR  133 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~-niv~~~~~~~~~~~~~  133 (304)
                      .|++.+.||+|+||.||++.+++   .++.+|+|++.....     ...+..|.. +..++|+ +|+++++++... +.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-DRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-CEE
Confidence            37889999999999999998764   468999999875321     114445555 7778665 577888888776 455


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++....
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~  152 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENI  152 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence            99999999999999998765 789999999999999999999654   89999999999999999999999999987532


Q ss_pred             CCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHH
Q 046594          214 GGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       214 ~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ....  ....++          ...++  +||||              |....  +...... .....++...+..+.++
T Consensus       153 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~l  231 (324)
T cd05587         153 FGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM-EHNVSYPKSLSKEAVSI  231 (324)
T ss_pred             CCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHH
Confidence            2111  111222          12222  89999              11111  1111000 01233455667889999


Q ss_pred             HHHhccccCCCCCCCCCCCH-----HHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKI-----VDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~-----~~vl~~  289 (304)
                      +.+||.     .||.+|++.     .++++|
T Consensus       232 i~~~l~-----~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         232 CKGLLT-----KHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             HHHHhh-----cCHHHcCCCCCCCHHHHhcC
Confidence            999999     999999986     666654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.8e-31  Score=240.99  Aligned_cols=144  Identities=21%  Similarity=0.172  Sum_probs=126.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|+||.||++.+..   +++.||||++......     ..+..|+. ++.++||||+++++++.+++ .+|
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-~~~   77 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKD---TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN-YLY   77 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-eEE
Confidence            58899999999999999998863   4789999999754211     15566777 99999999999999998874 559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.++|+|||++...
T Consensus        78 lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          78 LIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             EEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceec
Confidence            9999999999999998765 799999999999999999999664   8999999999999999999999999998754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.7e-31  Score=227.35  Aligned_cols=213  Identities=22%  Similarity=0.201  Sum_probs=165.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-------hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-------TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .|++.+.+|+|++|.||.+...   .++..+|+|.+......       ..+.+|+. +++++||||+++++++...+ .
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~---~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~   78 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDV---DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE-T   78 (263)
T ss_pred             cccccceecCCCceEEEEEEEc---CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC-e
Confidence            5888999999999999999765   35789999998654221       15667777 99999999999999998885 5


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++++||+++++|.+.+.... .+++..+..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||+++..
T Consensus        79 ~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625          79 LSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             EEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            599999999999999998765 789999999999999999999654   8999999999999999999999999998755


Q ss_pred             CCCCC--C---ccccc----------Ccccc--ccccc-----------CCC---Cc------ceeccccCCCCCCcchH
Q 046594          213 SGGSN--R---RNCEK----------TSEMA--EDIND-----------FVG---GQ------ECLDQRLYIPNEKFKIT  255 (304)
Q Consensus       213 ~~~~~--~---~~~~~----------~~~~s--~DV~S-----------~~~---~~------~~~~~~~~~~~~~~~~~  255 (304)
                      .....  .   ...+.          ....+  +||||           ..+   .+      .......   ...++..
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~  231 (263)
T cd06625         155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT---NPQLPSH  231 (263)
T ss_pred             cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC---CCCCCcc
Confidence            33211  0   00111          11122  89999           111   11      1111111   2345566


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          256 SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       256 ~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ....+.+++.+||.     .+|.+|||+.+++++
T Consensus       232 ~~~~~~~li~~~l~-----~~p~~Rpt~~~ll~~  260 (263)
T cd06625         232 VSPDARNFLRRTFV-----ENAKKRPSAEELLRH  260 (263)
T ss_pred             CCHHHHHHHHHHhh-----cCcccCCCHHHHhhC
Confidence            77889999999999     999999999999976

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=3e-31  Score=242.79  Aligned_cols=141  Identities=24%  Similarity=0.278  Sum_probs=121.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|++.+.||+|+||.||++.+.   ..++.||+|....    ..+.+|+. +++++||||+++++++..... .++++
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~---~~~~~vaiK~~~~----~~~~~E~~il~~l~HpnIv~~~~~~~~~~~-~~lv~  162 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDN---KTCEHVVIKAGQR----GGTATEAHILRAINHPSIIQLKGTFTYNKF-TCLIL  162 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEEC---CCCCEEEEechhh----hhhHHHHHHHHhCCCCCCCCEeEEEEECCe-eEEEE
Confidence            457999999999999999999886   3578999997542    23456666 999999999999999987744 49999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |++. ++|.+++.... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       163 e~~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        163 PRYK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             ecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            9995 58988887665 789999999999999999999654   8999999999999999999999999999754

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-33  Score=228.13  Aligned_cols=218  Identities=18%  Similarity=0.109  Sum_probs=172.4

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +-..|++.+.||+|.|+.|+++.++.   .|+.+|+|.+......    +.+++|+. -+.++||||+++.....+...+
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~---tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~   85 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH   85 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhcc---chHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccccee
Confidence            45678999999999999999998863   4788888887644322    27788888 8889999999999998887566


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEcccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGAA  209 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfgla  209 (304)
                       |+|+|+++|++|..-+-.+. .+++..+-.++.||++||+|+|.   .+|+|||+||+|+|+.+   ...+||+|||+|
T Consensus        86 -ylvFe~m~G~dl~~eIV~R~-~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvA  160 (355)
T KOG0033|consen   86 -YLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLA  160 (355)
T ss_pred             -EEEEecccchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceE
Confidence             99999999999976555443 68999999999999999999955   48999999999999963   346999999999


Q ss_pred             cccCCCCC-CcccccCcccc------------ccccc--------------CCC-Cc-----ceeccccCCCCCCcchHH
Q 046594          210 NYCSGGSN-RRNCEKTSEMA------------EDIND--------------FVG-GQ-----ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       210 ~~~~~~~~-~~~~~~~~~~s------------~DV~S--------------~~~-~~-----~~~~~~~~~~~~~~~~~~  256 (304)
                      ..++.+.. .+..|++++++            +|||+              |-. .+     .++...... ....-...
T Consensus       161 i~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~-~~~~w~~i  239 (355)
T KOG0033|consen  161 IEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDY-PSPEWDTV  239 (355)
T ss_pred             EEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCC-CCcccCcC
Confidence            99986555 66667766655            89999              222 22     233333221 12233456


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++..+|+.+||.     .||.+|.|+.|.++|
T Consensus       240 s~~Ak~LvrrML~-----~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  240 TPEAKSLIRRMLT-----VNPKKRITADEALKH  267 (355)
T ss_pred             CHHHHHHHHHHhc-----cChhhhccHHHHhCC
Confidence            7889999999999     999999999999876

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=1.9e-31  Score=238.56  Aligned_cols=206  Identities=19%  Similarity=0.150  Sum_probs=152.2

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch-----h-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----T-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.++   .+|+.+|+|++......     . .+.++.. ++.++||||+++++++...+ .+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~-~~~lv~e   76 (325)
T cd05604           1 KVIGKGSFGKVLLAKRK---LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE-KLYFVLD   76 (325)
T ss_pred             CceeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC-EEEEEEc
Confidence            46899999999999875   46799999998753211     1 2334444 78899999999999998874 4599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|..++.... .+++..+..++.|++.||+|||+.   |++||||||+|||++.++.+||+|||+++....... 
T Consensus        77 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  152 (325)
T cd05604          77 FVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT  152 (325)
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCC
Confidence            999999999887665 799999999999999999999654   899999999999999999999999999875432211 


Q ss_pred             -Cccccc----------Ccccc--cccccCC--------------CCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDINDFV--------------GGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S~~--------------~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||++              ...  +..+..+. .....+...+..+.+++.+|+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~ll  231 (325)
T cd05604         153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH-KPLVLRPGASLTAWSILEELL  231 (325)
T ss_pred             cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc-CCccCCCCCCHHHHHHHHHHh
Confidence             111222          12222  9999911              111  11111110 011233445677889999999


Q ss_pred             cccCCCCCCCCCCCHHH
Q 046594          269 SCCSNIEGNENHPKIVD  285 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~  285 (304)
                      .     .||.+||++.+
T Consensus       232 ~-----~~p~~R~~~~~  243 (325)
T cd05604         232 E-----KDRQRRLGAKE  243 (325)
T ss_pred             c-----cCHHhcCCCCC
Confidence            9     99999998853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=3.8e-31  Score=232.14  Aligned_cols=217  Identities=20%  Similarity=0.189  Sum_probs=155.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-h---hCCCCCcccceeeeeeCC---
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-L---KSSSHLNIVTLLGYPQDG---  129 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l---~~l~h~niv~~~~~~~~~---  129 (304)
                      +|++.+.||+|+||.||++.++.   +++.+|+|.++......    .+.+|.. +   +.++||||+++++++...   
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~   77 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPH---SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD   77 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECC---CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC
Confidence            58899999999999999998863   57899999987543221    2333333 4   445799999999987643   


Q ss_pred             -CCceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          130 -LQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       130 -~~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                       ...++++|||+++ +|.+++..... .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||
T Consensus        78 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg  153 (288)
T cd07863          78 RETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFG  153 (288)
T ss_pred             CCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccC
Confidence             2346999999975 89888876543 589999999999999999999654   89999999999999999999999999


Q ss_pred             cccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceec-----------c
Q 046594          208 AANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLD-----------Q  243 (304)
Q Consensus       208 la~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~-----------~  243 (304)
                      ++........ ....++          ...++  +||||              |....      .+.+           .
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07863         154 LARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR  233 (288)
T ss_pred             ccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence            9987643322 111111          12223  89999              11110      0000           0


Q ss_pred             ccCCCC-----------CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          244 RLYIPN-----------EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       244 ~~~~~~-----------~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ....+.           ..........+.+++.+||+     .||++|||+.++++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~R~t~~~~l~h  285 (288)
T cd07863         234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLT-----FNPHKRISAFRALQH  285 (288)
T ss_pred             cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhc-----cCcccCCCHHHHhcC
Confidence            000000           01112345678899999999     999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=4.1e-31  Score=238.29  Aligned_cols=216  Identities=18%  Similarity=0.140  Sum_probs=175.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCC-CCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSS-HLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~-h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|.||.||.+..+.+   |+.+|+|.+......     .....|+. |+++. |||||.+++.+.+.. 
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~t---g~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~-  109 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKST---GKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD-  109 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCC---CceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC-
Confidence            45789999999999999999999854   799999999765542     26778888 99998 999999999999985 


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC----CCeeEcccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL----CNAKLAGFG  207 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~----~~~kl~Dfg  207 (304)
                      .+++|||++.||.|.+.+...  .+++..+..++.|++.+++|||.   .|++||||||+|+|+...    +.+|++|||
T Consensus       110 ~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG  184 (382)
T KOG0032|consen  110 SVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFG  184 (382)
T ss_pred             eEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence            459999999999999999886  39999999999999999999966   489999999999999633    579999999


Q ss_pred             cccccCCCCC-CcccccCcccc------------ccccc-----------CCCCc---------ceeccccCCCCCCcch
Q 046594          208 AANYCSGGSN-RRNCEKTSEMA------------EDIND-----------FVGGQ---------ECLDQRLYIPNEKFKI  254 (304)
Q Consensus       208 la~~~~~~~~-~~~~~~~~~~s------------~DV~S-----------~~~~~---------~~~~~~~~~~~~~~~~  254 (304)
                      ++........ ...+|+.++++            .||||           .++..         .+....+.. ..+...
T Consensus       185 la~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f-~~~~w~  263 (382)
T KOG0032|consen  185 LAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDF-TSEPWD  263 (382)
T ss_pred             CceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCC-CCCCcc
Confidence            9999987444 55566633333            89999           11111         222232211 233445


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+..+.+++.+++.     .||..|+|+.++++|
T Consensus       264 ~is~~akd~i~~ll~-----~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  264 DISESAKDFIRKLLE-----FDPRKRLTAAQALQH  293 (382)
T ss_pred             ccCHHHHHHHHHhcc-----cCcccCCCHHHHhcC
Confidence            668899999999999     999999999999997

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.97  E-value=1.2e-30  Score=228.58  Aligned_cols=217  Identities=19%  Similarity=0.138  Sum_probs=163.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .|++.+.||+|+||.||++.+..   .+..+++|.+.......  .+..|+. ++.++|||++++++++...+ ..++|+
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-~~~~v~   81 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKE---TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-NLWILI   81 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECC---CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC-EEEEEE
Confidence            47889999999999999998763   46789999987654333  5666777 99999999999999998874 459999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++++|..++.....++++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~  158 (282)
T cd06643          82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ  158 (282)
T ss_pred             EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence            99999999998876555799999999999999999999764   899999999999999999999999999865432211


Q ss_pred             -----Ccccc------------cCcccc--ccccc-----------CCCCcce-----ecccc--CCCCCCcchHHHHHH
Q 046594          218 -----RRNCE------------KTSEMA--EDIND-----------FVGGQEC-----LDQRL--YIPNEKFKITSLAKL  260 (304)
Q Consensus       218 -----~~~~~------------~~~~~s--~DV~S-----------~~~~~~~-----~~~~~--~~~~~~~~~~~~~~l  260 (304)
                           ..+..            ....++  +||||           .++....     .....  ..+....+...+..+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (282)
T cd06643         159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEF  238 (282)
T ss_pred             ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHH
Confidence                 00000            011222  99999           1111100     00000  000112334456789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+++.+||+     .||.+||++.+++++
T Consensus       239 ~~li~~~l~-----~~p~~Rp~~~~il~~  262 (282)
T cd06643         239 KDFLKKCLE-----KNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            999999999     999999999999865

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.97  E-value=7.2e-31  Score=231.89  Aligned_cols=217  Identities=20%  Similarity=0.191  Sum_probs=165.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .++|++.+.||+|+||.||++...   .++..+|+|.+.......  .+.+|+. ++.++|+||+++++++..++ ..++
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~l   93 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDI---ATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-ELWV   93 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEEC---CCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-EEEE
Confidence            578999999999999999999865   357899999997544332  6666777 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++++|.+++...  .+++.++..++.|++.||+|||+.   +++||||||+|||++.++.++|+|||++......
T Consensus        94 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~  168 (297)
T cd06656          94 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  168 (297)
T ss_pred             eecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence            99999999999998754  589999999999999999999654   8999999999999999999999999998765433


Q ss_pred             CC--Cccccc----------Ccccc--ccccc--------------CCCCc---ceec-cccCCCCCCcchHHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND--------------FVGGQ---ECLD-QRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~---~~~~-~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ..  ....+.          ....+  +||||              |....   .... .....+....+...+..+.++
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  248 (297)
T cd06656         169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDF  248 (297)
T ss_pred             ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHH
Confidence            22  111111          12222  89999              11111   0000 000001112344556778999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||.     .||++||++.+++++
T Consensus       249 i~~~l~-----~~p~~Rps~~~il~~  269 (297)
T cd06656         249 LNRCLE-----MDVDRRGSAKELLQH  269 (297)
T ss_pred             HHHHcc-----CChhhCcCHHHHhcC
Confidence            999999     999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.97  E-value=2.8e-31  Score=232.12  Aligned_cols=209  Identities=18%  Similarity=0.148  Sum_probs=153.1

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      ||+|+||.||++..+.   +|+.+|+|.+......     ..+..|.. +++++||||+++++++..+ ..+++||||++
T Consensus         1 lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~-~~~~lv~e~~~   76 (277)
T cd05607           1 LGKGGFGEVCAVQVKN---TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK-THLCLVMSLMN   76 (277)
T ss_pred             CCCCCceEEEEEEEcc---CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC-CeEEEEEecCC
Confidence            6999999999998763   5789999998643221     13344666 9999999999999998877 45599999999


Q ss_pred             CCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-Cc
Q 046594          142 RGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-RR  219 (304)
Q Consensus       142 ~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~  219 (304)
                      +|+|.+++..... .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++........ ..
T Consensus        77 g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~  153 (277)
T cd05607          77 GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQ  153 (277)
T ss_pred             CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeec
Confidence            9999988865443 689999999999999999999654   899999999999999999999999999876654322 11


Q ss_pred             cccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHHHHHHHHHh
Q 046594          220 NCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAKLGDIEKWC  267 (304)
Q Consensus       220 ~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~l~~~c  267 (304)
                      ..++          ...++  +||||              +....      ++................+..+.+++.+|
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  233 (277)
T cd05607         154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLF  233 (277)
T ss_pred             cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHH
Confidence            1111          12233  89999              11110      11111110000011123567789999999


Q ss_pred             ccccCCCCCCCCCCCHHHHHH
Q 046594          268 ISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       268 l~~~~~~~dp~~Rps~~~vl~  288 (304)
                      |+     .||++||++.|+++
T Consensus       234 L~-----~~P~~R~~~~~~~~  249 (277)
T cd05607         234 LA-----KKPEDRLGSREKND  249 (277)
T ss_pred             hc-----cCHhhCCCCccchh
Confidence            99     99999999966553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=4.5e-31  Score=240.72  Aligned_cols=142  Identities=20%  Similarity=0.196  Sum_probs=124.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .|++.+.||+|+||.||++.+..   .++.+|+|.+.....     ...+.+|+. ++.++|+||+++++.+.++ +.++
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~-~~~~   77 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVD---TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK-DNLY   77 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CEEE
Confidence            58999999999999999998763   478999999864321     125667777 9999999999999999887 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.
T Consensus        78 lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          78 FVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            9999999999999998766 789999999999999999999764   89999999999999999999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=4e-31  Score=240.01  Aligned_cols=144  Identities=24%  Similarity=0.219  Sum_probs=126.1

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .|++.+.||+|+||.||++.++.   .++.+|+|++......     ..+++|.. +.+++|+||+++++.+.+.. .+|
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~-~~~   77 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKD---TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL-NLY   77 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-eEE
Confidence            58899999999999999998763   5789999999754321     15666777 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        78 lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628          78 LIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             EEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence            9999999999999998765 79999999999999999999965   48999999999999999999999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=2e-31  Score=237.72  Aligned_cols=210  Identities=20%  Similarity=0.184  Sum_probs=155.8

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.++.   ++..+|+|.++....     ...+..|.. ++.+ +||||+++++++...+ .+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~-~~~lv~e   76 (318)
T cd05570           1 KVLGKGSFGKVLLAELKG---TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD-RLFFVME   76 (318)
T ss_pred             CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-EEEEEEc
Confidence            468999999999998763   468999999875421     113334444 6555 7999999999988874 5599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.++|+|||+++....... 
T Consensus        77 ~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  152 (318)
T cd05570          77 YVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT  152 (318)
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc
Confidence            999999999988765 79999999999999999999965   4899999999999999999999999999875322211 


Q ss_pred             -Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||              |....  .... .+......++...+..+.+++.+||
T Consensus       153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~li~~~l  231 (318)
T cd05570         153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQ-SILEDEVRYPRWLSKEAKSILKSFL  231 (318)
T ss_pred             ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHH-HHHcCCCCCCCcCCHHHHHHHHHHc
Confidence             111222          12222  89999              11111  1100 0000012344556788999999999


Q ss_pred             cccCCCCCCCCCCCH-----HHHHHH
Q 046594          269 SCCSNIEGNENHPKI-----VDVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~-----~~vl~~  289 (304)
                      .     .||.+|||+     .+++++
T Consensus       232 ~-----~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         232 T-----KNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             c-----CCHHHcCCCCCCCHHHHhcC
Confidence            9     999999999     888765

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=5.6e-31  Score=230.86  Aligned_cols=220  Identities=19%  Similarity=0.221  Sum_probs=166.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ...|++.+.||+|+||.||++.+.   .++..+|+|+.......   ..+..|+. ++.++||||+++++++... +.++
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~   79 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHI---PTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-NNIC   79 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEc---CCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-CEEE
Confidence            357899999999999999998875   35789999988754332   26777777 9999999999999999988 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++++|.+++...+ .+++..+..++.+++.||.|||+.+  +++||||||+||+++.++.++|+|||++.....
T Consensus        80 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~  156 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN  156 (284)
T ss_pred             EEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence            9999999999999988765 7999999999999999999998643  799999999999999999999999999875432


Q ss_pred             CCCCccccc----------Ccccc--ccccc--------------CCCCc-------------ceeccccCCCCCCcch-
Q 046594          215 GSNRRNCEK----------TSEMA--EDIND--------------FVGGQ-------------ECLDQRLYIPNEKFKI-  254 (304)
Q Consensus       215 ~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~-------------~~~~~~~~~~~~~~~~-  254 (304)
                      .......++          ....+  +||||              |....             +............++. 
T Consensus       157 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd06620         157 SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSS  236 (284)
T ss_pred             hccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCch
Confidence            221111111          22223  99999              11000             0011111000111222 


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      ..+..+.+++.+||+     .||++|||+.+++++.
T Consensus       237 ~~~~~~~~li~~~l~-----~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         237 DFPEDLRDFVDACLL-----KDPTERPTPQQLCAMP  267 (284)
T ss_pred             hcCHHHHHHHHHHhc-----CCcccCcCHHHHhcCc
Confidence            255679999999999     9999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.97  E-value=1.1e-30  Score=225.18  Aligned_cols=219  Identities=22%  Similarity=0.259  Sum_probs=166.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..|++.+.+|+|+||.||++.+.    ++..+|+|.+...... ..+..|+. +++++|||++++++++...... ++++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~----~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~-~~v~   78 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL----EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPI-CLVF   78 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe----CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCce-EEEE
Confidence            36788999999999999998764    3578999998765433 36777878 9999999999999998877544 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++........
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  155 (256)
T cd05112          79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY  155 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence            99999999999987655789999999999999999999654   799999999999999999999999999876533221


Q ss_pred             ---Cccc---cc-------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          218 ---RRNC---EK-------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       218 ---~~~~---~~-------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                         ....   +.       .+.++  +||||        ...+.         ...+..........+...+..+.+++.
T Consensus       156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (256)
T cd05112         156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQ  235 (256)
T ss_pred             cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence               0110   00       22233  99999        11111         111100000011123335678999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      +||.     .+|++|||+.+++++|.
T Consensus       236 ~~l~-----~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         236 HCWK-----ERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHcc-----cChhhCCCHHHHHHhhC
Confidence            9999     99999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=7.5e-31  Score=230.12  Aligned_cols=218  Identities=15%  Similarity=0.136  Sum_probs=165.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +|++++.||+|+||.||++.+..   .+..+|+|.+......   ..+.+|+. +++++|+||+++++.+... +.+++|
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv   77 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRP---TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE-GAVYMC   77 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-CeEEEE
Confidence            68899999999999999998763   5789999988754322   25666777 9999999999999998887 455999


Q ss_pred             EeecCCCChhhHhhhc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          137 FEFMQRGSLRWNLREK--GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |||+++++|.+++...  ...+++..+..++.|++.||.|||+.  .+++||||||+||+++.++.++|+|||++.....
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  155 (286)
T cd06622          78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA  155 (286)
T ss_pred             EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence            9999999999988764  22689999999999999999999742  3799999999999999999999999999876533


Q ss_pred             CCCCccccc-----C-----------cccc--ccccc--------------CCCCc--ceec---cccCCCCCCcchHHH
Q 046594          215 GSNRRNCEK-----T-----------SEMA--EDIND--------------FVGGQ--ECLD---QRLYIPNEKFKITSL  257 (304)
Q Consensus       215 ~~~~~~~~~-----~-----------~~~s--~DV~S--------------~~~~~--~~~~---~~~~~~~~~~~~~~~  257 (304)
                      .......+.     +           ..++  +||||              |....  ...+   ..........+...+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd06622         156 SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYS  235 (286)
T ss_pred             CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccC
Confidence            222111110     1           1123  89999              11111  1000   011001234555677


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+++.+||.     .+|++||++.+++++
T Consensus       236 ~~~~~li~~~l~-----~~p~~Rp~~~~l~~~  262 (286)
T cd06622         236 DDAQDFVAKCLN-----KIPNRRPTYAQLLEH  262 (286)
T ss_pred             HHHHHHHHHHcc-----cCcccCCCHHHHhcC
Confidence            889999999999     999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.97  E-value=6e-31  Score=227.34  Aligned_cols=221  Identities=19%  Similarity=0.178  Sum_probs=167.1

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC-CCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~~  134 (304)
                      +|++.+.+|.|+||.||++.+.   .++..+|+|.+.......    .+..|+. +++++|+||+++++++... +..++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRK---SDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLY   77 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeec---CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEE
Confidence            4788999999999999999876   357899999987543211    5667777 9999999999999987643 34568


Q ss_pred             EEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          135 LVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYS--KPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~--~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ++|||+++++|.+++...   ..++++..++.++.|++.||+|||..+  +.+++|+||+|+||+++.++.++|+|||++
T Consensus        78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~  157 (265)
T cd08217          78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA  157 (265)
T ss_pred             EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence            999999999999998764   337999999999999999999997432  668999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHH
Q 046594          210 NYCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ........  ....++          ....+  +||||              +....  .............++...+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (265)
T cd08217         158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSE  237 (265)
T ss_pred             ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHH
Confidence            87654332  111111          12222  89999              11110  110100000023455566788


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+++.+||+     .+|++|||+.+|++|
T Consensus       238 ~~~l~~~~l~-----~~p~~Rp~~~~il~~  262 (265)
T cd08217         238 LNEVIKSMLN-----VDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHHHHcc-----CCcccCCCHHHHhhC
Confidence            9999999999     999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.97  E-value=1.2e-30  Score=226.73  Aligned_cols=215  Identities=18%  Similarity=0.207  Sum_probs=155.1

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++..... .....+++|.+.......   .+.+|+. ++.++|+||+++++.+...+.. ++||||++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~-~lv~e~~~   78 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRG-MSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPY-LLVLEFCP   78 (269)
T ss_pred             CcCCccCCceEEEEEEecC-CCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCce-EEEEEeCC
Confidence            3689999999999865332 345789999876543322   5666777 8999999999999999887544 99999999


Q ss_pred             CCChhhHhhhcCC----CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          142 RGSLRWNLREKGG----PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       142 ~gsL~~~l~~~~~----~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      +|+|.+++.....    ..++.....++.|++.||+|||+.   +++||||||+|||++.++++||+|||++........
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~  155 (269)
T cd05042          79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY  155 (269)
T ss_pred             CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchh
Confidence            9999999977542    346788899999999999999654   899999999999999999999999999865322111


Q ss_pred             -------Cccc-cc-------------Ccccc--ccccc--------CC----CCc-----c-----eeccccCCCCCCc
Q 046594          218 -------RRNC-EK-------------TSEMA--EDIND--------FV----GGQ-----E-----CLDQRLYIPNEKF  252 (304)
Q Consensus       218 -------~~~~-~~-------------~~~~s--~DV~S--------~~----~~~-----~-----~~~~~~~~~~~~~  252 (304)
                             .... ..             ....+  +||||        +.    +..     +     +.......+....
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (269)
T cd05042         156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQL  235 (269)
T ss_pred             eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcc
Confidence                   0000 00             01122  99999        11    111     0     0111111112233


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      +...+..+.+++..||.      ||++|||+++|++.|.
T Consensus       236 ~~~~~~~~~~~~~~~~~------dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         236 DLKYSDRWYEVMQFCWL------DPETRPTAEEVHELLT  268 (269)
T ss_pred             cccCCHHHHHHHHHHhc------CcccccCHHHHHHHhc
Confidence            44566778888888876      9999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.97  E-value=7.2e-31  Score=231.77  Aligned_cols=217  Identities=20%  Similarity=0.192  Sum_probs=164.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+|++.+.+|+|++|.||++.+.   .++..+++|.+.......  .+.+|+. ++.++|+|++++++.+..+. ..++
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~---~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~-~~~l   94 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDV---ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-ELWV   94 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEEC---CCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-EEEE
Confidence            468999999999999999999865   357899999987654332  6667777 99999999999999988774 5599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++++|.+++...  .+++.++..++.|++.||+|||..   +++||||||+||+++.++.++|+|||++......
T Consensus        95 v~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~  169 (296)
T cd06654          95 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (296)
T ss_pred             eecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence            99999999999998654  589999999999999999999654   8999999999999999999999999998765432


Q ss_pred             CC--Cccccc----------Ccccc--ccccc--------------CCCCcc---eecc-ccCCCCCCcchHHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND--------------FVGGQE---CLDQ-RLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~~---~~~~-~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ..  ....++          ....+  +||||              |.....   .... ....+....+......+.++
T Consensus       170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  249 (296)
T cd06654         170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF  249 (296)
T ss_pred             ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHH
Confidence            21  111111          11222  99999              111110   0000 00000112344556779999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||.     .||++|||+.+++++
T Consensus       250 i~~~l~-----~~p~~Rpt~~eil~~  270 (296)
T cd06654         250 LNRCLD-----MDVEKRGSAKELLQH  270 (296)
T ss_pred             HHHHCc-----CCcccCcCHHHHhhC
Confidence            999999     999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.97  E-value=9.2e-31  Score=227.71  Aligned_cols=218  Identities=18%  Similarity=0.163  Sum_probs=162.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCC-CCCcccceeeeeeCCC-----C
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSS-SHLNIVTLLGYPQDGL-----Q  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l-~h~niv~~~~~~~~~~-----~  131 (304)
                      .+|++.+.+|+|+||.||++...   .+++.+|+|......... .+..|+. ++++ +|+||+++++++...+     .
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~---~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHV---KTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEc---CCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            47888999999999999999876   346899999987654333 5666666 7777 7999999999987532     3


Q ss_pred             ceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      .++++|||+++|+|.+++.... ..+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++.
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCce
Confidence            4689999999999999988753 3789999999999999999999764   89999999999999999999999999987


Q ss_pred             ccCCCCC--Cccccc---------------Ccccc--ccccc-----------CCCCcc-------eeccccCCCCCCcc
Q 046594          211 YCSGGSN--RRNCEK---------------TSEMA--EDIND-----------FVGGQE-------CLDQRLYIPNEKFK  253 (304)
Q Consensus       211 ~~~~~~~--~~~~~~---------------~~~~s--~DV~S-----------~~~~~~-------~~~~~~~~~~~~~~  253 (304)
                      .......  ....++               ...++  +||||           ..+...       ...... ......+
T Consensus       160 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~  238 (272)
T cd06637         160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN-PAPRLKS  238 (272)
T ss_pred             ecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC-CCCCCCC
Confidence            6533211  111111               11222  99999           111100       000000 0011122


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ...+..+.+++.+||.     .||.+|||+.++++|
T Consensus       239 ~~~~~~~~~li~~~l~-----~~p~~Rpt~~~il~~  269 (272)
T cd06637         239 KKWSKKFQSFIESCLV-----KNHSQRPTTEQLMKH  269 (272)
T ss_pred             CCcCHHHHHHHHHHcC-----CChhhCCCHHHHhhC
Confidence            3455789999999999     999999999999874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.97  E-value=1.5e-30  Score=225.21  Aligned_cols=217  Identities=19%  Similarity=0.183  Sum_probs=166.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.+|+|+||.||++.+.    ++..+++|........ ..+.+|+. +++++|+||+++++++.. .. .+++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~-~~~v   78 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EP-IYII   78 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEec----CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CC-eEEE
Confidence            468999999999999999998753    3567999988765433 36777777 999999999999999877 34 4999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++.... ..+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  155 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN  155 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence            99999999999997643 3688999999999999999999654   8999999999999999999999999998766433


Q ss_pred             CC---Ccccc---c-------Ccccc--ccccc--------CCCCc---------cee---ccccCCCCCCcchHHHHHH
Q 046594          216 SN---RRNCE---K-------TSEMA--EDIND--------FVGGQ---------ECL---DQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~---~~~~~---~-------~~~~s--~DV~S--------~~~~~---------~~~---~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..   ....+   .       ...++  +||||        ...+.         ...   ....   ....+...+..+
T Consensus       156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  232 (260)
T cd05073         156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---RMPRPENCPEEL  232 (260)
T ss_pred             CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC---CCCCcccCCHHH
Confidence            22   11110   0       12233  89999        11111         000   1111   112334556789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      .+++.+||.     .+|++||++.++++.|+.
T Consensus       233 ~~~i~~~l~-----~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         233 YNIMMRCWK-----NRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHcc-----cCcccCcCHHHHHHHHhc
Confidence            999999999     999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=2.9e-31  Score=236.44  Aligned_cols=210  Identities=20%  Similarity=0.186  Sum_probs=153.4

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccc-----hh-HHHHHHHhh-CCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QT-KLEEEILLK-SSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~-~~~~e~~l~-~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++.+..   .++.||+|.++....     .. .+.++..++ .++||||+++++++.+.+ .+++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~-~~~lv~e   76 (316)
T cd05619           1 KMLGKGSFGKVFLAELKG---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE-NLFFVME   76 (316)
T ss_pred             CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC-EEEEEEe
Confidence            468999999999998763   468999999876421     11 333333354 459999999999998874 4599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+++.++..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++....... 
T Consensus        77 y~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05619          77 YLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK  152 (316)
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc
Confidence            999999999998765 789999999999999999999654   899999999999999999999999999875422111 


Q ss_pred             -Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 -RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                       ....++          ...++  +||||              |....  +... .+......++...+..+.+++.+||
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~li~~~l  231 (316)
T cd05619         153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQ-SIRMDNPCYPRWLTREAKDILVKLF  231 (316)
T ss_pred             eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCCCCCccCCHHHHHHHHHHh
Confidence             111122          12223  89999              11111  1111 0100112344455677899999999


Q ss_pred             cccCCCCCCCCCCCHH-HHHHH
Q 046594          269 SCCSNIEGNENHPKIV-DVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~-~vl~~  289 (304)
                      +     .||++||++. ++++|
T Consensus       232 ~-----~~P~~R~~~~~~l~~h  248 (316)
T cd05619         232 V-----REPERRLGVKGDIRQH  248 (316)
T ss_pred             c-----cCHhhcCCChHHHHcC
Confidence            9     9999999996 66553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=228.44  Aligned_cols=218  Identities=19%  Similarity=0.162  Sum_probs=166.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .+|++.+.+|.|+||.||++....   ++..+|+|.........  .+..|+. +++++||||+++++.+..++ .+++|
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv   80 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKE---TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN-KLWIL   80 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcC---CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC-eEEEE
Confidence            579999999999999999998753   57899999987654333  6667777 99999999999999998874 45999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|.+++...+..+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||++.......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~  157 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL  157 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence            999999999999987665799999999999999999999654   89999999999999999999999999886553321


Q ss_pred             C--Cccccc---------------Cccc--cccccc-----------CCCCc-----ceecccc--CCCCCCcchHHHHH
Q 046594          217 N--RRNCEK---------------TSEM--AEDIND-----------FVGGQ-----ECLDQRL--YIPNEKFKITSLAK  259 (304)
Q Consensus       217 ~--~~~~~~---------------~~~~--s~DV~S-----------~~~~~-----~~~~~~~--~~~~~~~~~~~~~~  259 (304)
                      .  ....++               ....  .+||||           .++..     .......  ..+....+...+..
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (280)
T cd06611         158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSS  237 (280)
T ss_pred             cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHH
Confidence            1  000011               1112  289999           11111     0000000  00011223345678


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+++.+||+     .+|.+||++.+++++
T Consensus       238 ~~~li~~~l~-----~~p~~Rps~~~il~~  262 (280)
T cd06611         238 FNDFLKSCLV-----KDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHHhc-----cChhhCcCHHHHhcC
Confidence            8999999999     999999999999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=3.6e-31  Score=236.58  Aligned_cols=215  Identities=17%  Similarity=0.135  Sum_probs=158.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCC-CCCcccceeeeeeCCCCce
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~  133 (304)
                      .|++.+.||+|+||.||++.++.   ++..+|+|.+.......     .+..+.. +..+ +|++|+++++++...+ .+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD-RL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC-EE
Confidence            37889999999999999998763   46899999987543211     2333334 5555 6899999999988774 55


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++|+|.+.+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~  152 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENM  152 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence            99999999999999987765 799999999999999999999754   89999999999999999999999999997543


Q ss_pred             CCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHH
Q 046594          214 GGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       214 ~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ....  ....++          ...++  +||||              |....  +...... .....++...+..+.++
T Consensus       153 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~l  231 (323)
T cd05616         153 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM-EHNVAYPKSMSKEAVAI  231 (323)
T ss_pred             CCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH-hCCCCCCCcCCHHHHHH
Confidence            2211  112222          22223  89999              11111  1111111 01223455667889999


Q ss_pred             HHHhccccCCCCCCCCCCCH-----HHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKI-----VDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~-----~~vl~~  289 (304)
                      +.+|++     .||++|++.     .++++|
T Consensus       232 i~~~l~-----~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         232 CKGLMT-----KHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             HHHHcc-----cCHHhcCCCCCCCHHHHhcC
Confidence            999999     999999984     666654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.97  E-value=1.3e-30  Score=224.85  Aligned_cols=218  Identities=18%  Similarity=0.151  Sum_probs=165.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ||+..+.+|+|+||.+|.+...   .++..+++|.+......    ..+.+|+. +++++|+||+++++++.+. ..+++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~   76 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRT---EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD-NTLLI   76 (256)
T ss_pred             CceEeeEecccCCceEEEEEEc---CCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-CeEEE
Confidence            6899999999999999888765   46789999988754321    25667777 9999999999999999887 45599


Q ss_pred             EEeecCCCChhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +|||+++|+|.+++... ...+++.++..++.|++.||+|||+.   +++||||+|+||+++.++.+||+|||++.....
T Consensus        77 ~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~  153 (256)
T cd08221          77 EMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGS  153 (256)
T ss_pred             EEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence            99999999999999876 33789999999999999999999654   899999999999999999999999999886644


Q ss_pred             CCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          215 GSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       215 ~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ...  ....++          ....+  +||||              +....  +.............+...+..+.+++
T Consensus       154 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  233 (256)
T cd08221         154 EYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLV  233 (256)
T ss_pred             ccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHH
Confidence            331  111111          11122  89999              11111  11111110001222344567899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      .+||.     .+|++||++.++++++
T Consensus       234 ~~~l~-----~~p~~R~s~~~ll~~~  254 (256)
T cd08221         234 HSLLQ-----QDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHcc-----cCcccCCCHHHHhhCc
Confidence            99999     9999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=9.6e-31  Score=225.77  Aligned_cols=216  Identities=19%  Similarity=0.210  Sum_probs=158.0

Q ss_pred             cccCCccccceeeecceeec-------CCCcEEEEEEeccccc-hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           66 KSFGDSVEGLTLIKGDRAVS-------RNLTVVAVKARRYMAS-QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +.||+|+||.||++.++...       .....+++|....... ...+.+++. +++++||||+++++++.. +.. ++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~-~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN-IMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc-EEE
Confidence            46899999999998876432       0113588888765543 346777777 999999999999999887 455 999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-------CeeEcccccc
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-------NAKLAGFGAA  209 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-------~~kl~Dfgla  209 (304)
                      |||+++|+|.+++......+++..+..++.|++.||+|||+   .+++||||||+|||++.++       .++|+|||++
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999998766578999999999999999999965   4899999999999999887       7999999999


Q ss_pred             cccCCCCC-Cccc--cc-----Cc--ccc--cccccC--------CCCc----ce-eccc--cCCCCCCcchHHHHHHHH
Q 046594          210 NYCSGGSN-RRNC--EK-----TS--EMA--EDINDF--------VGGQ----EC-LDQR--LYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       210 ~~~~~~~~-~~~~--~~-----~~--~~s--~DV~S~--------~~~~----~~-~~~~--~~~~~~~~~~~~~~~l~~  262 (304)
                      ........ ....  ..     ..  .++  +||||+        ..+.    .. ....  ........+......+.+
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (259)
T cd05037         156 ITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPDCAELAN  235 (259)
T ss_pred             cccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCCCCCchHHHH
Confidence            87543221 1100  00     11  333  999991        1111    00 0000  000011122222378899


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      ++.+||.     .+|.+|||+.++++.|+
T Consensus       236 li~~~l~-----~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         236 LINQCWT-----YDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HHHHHhc-----cChhhCCCHHHHHHhcC
Confidence            9999999     99999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.97  E-value=1.5e-30  Score=227.35  Aligned_cols=213  Identities=19%  Similarity=0.208  Sum_probs=164.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..|+..+.||+|+||.||++.+.   .++..+|+|.........   .+.+|+. +++++||||+++++++..++ .+++
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l   79 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDN---RTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT-KLWI   79 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEc---CCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC-ceEE
Confidence            46788899999999999998765   346899999987544322   6777777 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |+||+++++|.+++...  .+++..+..++.|++.|++|||+   .+++|+||+|+||+++.++.++|+|||++......
T Consensus        80 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06642          80 IMEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT  154 (277)
T ss_pred             EEEccCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence            99999999999988653  68999999999999999999964   48999999999999999999999999999766433


Q ss_pred             CC--Cccccc----------Ccccc--ccccc-----------CCCCcc--------eeccccCCCCCCcchHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND-----------FVGGQE--------CLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S-----------~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ..  ....+.          ...++  +||||           ..+..+        ......   ....+...+..+.+
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  231 (277)
T cd06642         155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS---PPTLEGQYSKPFKE  231 (277)
T ss_pred             chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC---CCCCCcccCHHHHH
Confidence            21  011111          12223  99999           111110        011111   12233456678999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||+     .+|++||++.++++|
T Consensus       232 li~~~l~-----~~p~~Rp~~~~il~~  253 (277)
T cd06642         232 FVEACLN-----KDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHHcc-----CCcccCcCHHHHHHh
Confidence            9999999     999999999999985

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.3e-31  Score=239.44  Aligned_cols=143  Identities=22%  Similarity=0.178  Sum_probs=124.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--h---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--Q---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|+||.||++..+   .+++.||+|++.....  .   ..+..|+. +++++||||+++++++.+.+ .+|
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-~~~   77 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKK---DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ-YLY   77 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEEC---CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eeE
Confidence            5889999999999999999876   3578999999865321  1   15666777 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      +||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        78 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~  150 (377)
T cd05629          78 LIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTG  150 (377)
T ss_pred             EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccc
Confidence            9999999999999998765 799999999999999999999654   899999999999999999999999999963

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.97  E-value=1.3e-30  Score=224.51  Aligned_cols=218  Identities=21%  Similarity=0.186  Sum_probs=168.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      .+|+..+.+|+|+||.||++....   ++..+++|.+........+.+|+. +++++|+||+++++++... ..+|+++|
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~l~~e   78 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKE---TGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKN-TDLWIVME   78 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcC---CCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC-CcEEEEEe
Confidence            468899999999999999988753   468999999986654557888888 9999999999999999887 45599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++++|.+++......+++..+..++.|++.||.|||+.   +++||||+|+||+++.++.++|+|||++........ 
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence            9999999999987666899999999999999999999764   799999999999999999999999999987654331 


Q ss_pred             -Cccccc----------Ccccc--cccccC-----------CCCc-----c--eeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          218 -RRNCEK----------TSEMA--EDINDF-----------VGGQ-----E--CLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S~-----------~~~~-----~--~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                       ....+.          ...++  +||||+           .+..     .  .............+......+.+++.+
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  235 (256)
T cd06612         156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKK  235 (256)
T ss_pred             cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHH
Confidence             111111          12223  999991           1110     0  000000000112233455789999999


Q ss_pred             hccccCCCCCCCCCCCHHHHHHH
Q 046594          267 CISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       267 cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ||+     .||++|||+.+++++
T Consensus       236 ~l~-----~~P~~Rps~~~il~~  253 (256)
T cd06612         236 CLV-----KDPEERPSAIQLLQH  253 (256)
T ss_pred             HHh-----cChhhCcCHHHHhcC
Confidence            999     999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=8.9e-31  Score=237.77  Aligned_cols=148  Identities=24%  Similarity=0.305  Sum_probs=122.7

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC--
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL--  130 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~--  130 (304)
                      +..+|++.+.||+|+||.||.+.+..   .++.+|||++......    ..+.+|+. ++.++||||+++++++....  
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~   98 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL   98 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECC---CCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc
Confidence            36799999999999999999998753   4688999998753221    14556666 99999999999999875432  


Q ss_pred             ---CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          131 ---QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       131 ---~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                         ..+|+||||+++ +|.+.+..   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||
T Consensus        99 ~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG  171 (364)
T cd07875          99 EEFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG  171 (364)
T ss_pred             cccCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCC
Confidence               346999999976 78777754   58899999999999999999965   489999999999999999999999999


Q ss_pred             cccccCCC
Q 046594          208 AANYCSGG  215 (304)
Q Consensus       208 la~~~~~~  215 (304)
                      +++.....
T Consensus       172 ~a~~~~~~  179 (364)
T cd07875         172 LARTAGTS  179 (364)
T ss_pred             CccccCCC
Confidence            99876543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=4e-31  Score=245.53  Aligned_cols=217  Identities=17%  Similarity=0.170  Sum_probs=156.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCC-------C
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDG-------L  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~-------~  130 (304)
                      .++|++.+.||+|+||.||++.+.   ..++.||||++....  ....+|+. ++.++||||+++++++...       .
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~---~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICI---DTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEEC---CCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            357999999999999999999875   346899999886432  23345666 9999999999998876432       1


Q ss_pred             CceEEEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGF  206 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Df  206 (304)
                      ..+++||||+++ +|.+++..   ....+++..+..++.|++.||+|||+.   +|+||||||+|||++.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence            235799999976 78777653   233799999999999999999999654   899999999999999664 7999999


Q ss_pred             ccccccCCCCC-Cccccc-----------Ccccc--ccccc--------------CCCCc------ce------------
Q 046594          207 GAANYCSGGSN-RRNCEK-----------TSEMA--EDIND--------------FVGGQ------EC------------  240 (304)
Q Consensus       207 gla~~~~~~~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~------------  240 (304)
                      |+++....... ....++           ...++  +||||              |....      .+            
T Consensus       216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~  295 (440)
T PTZ00036        216 GSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL  295 (440)
T ss_pred             ccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            99987644322 111111           11233  89999              21111      00            


Q ss_pred             --ecccc---CCC-------CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          241 --LDQRL---YIP-------NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       241 --~~~~~---~~~-------~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                        +.+..   ..+       ...+|...+.++.+|+.+||.     .||.+|||+.|+++|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~-----~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLK-----YEPLKRLNPIEALAD  351 (440)
T ss_pred             HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCC-----CChhHCcCHHHHhCC
Confidence              00000   000       011223345789999999999     999999999999975

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.97  E-value=7.4e-31  Score=230.42  Aligned_cols=217  Identities=19%  Similarity=0.195  Sum_probs=162.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .|+..+.||+|+||.||.+.+..   +++.+|+|.+......     ..+.+|+. ++.++|+|++++.+++..++ ..+
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~   76 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRA---TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-ALC   76 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECC---CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC-EEE
Confidence            36778899999999999988763   5789999998654321     14556767 99999999999999988874 459


Q ss_pred             EEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++|||+++++|.+++...+. .+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.++|+|||++....
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632          77 LVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             EEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence            99999999999988876433 69999999999999999999965   489999999999999999999999999987653


Q ss_pred             CCCC-Cccccc----------Ccccc--ccccc--------------CCCCc-----ceeccccCCCCCCcchHHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .... ....++          ...++  +||||              |....     +.+..........++...+..+.
T Consensus       154 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
T cd05632         154 EGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAK  233 (285)
T ss_pred             CCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHH
Confidence            3221 111111          12222  89999              11111     11111111111234455667889


Q ss_pred             HHHHHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      +++.+||+     .||++||+     +.++++|
T Consensus       234 ~li~~~l~-----~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         234 SICKMLLT-----KDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             HHHHHHcc-----CCHhHcCCCcccChHHHHcC
Confidence            99999999     99999999     7788776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.97  E-value=8.1e-30  Score=258.30  Aligned_cols=215  Identities=20%  Similarity=0.283  Sum_probs=161.3

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCCCCh
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL  145 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL  145 (304)
                      .+|+|+||.||++..+   .++..||+|++......  ..+++. +++++||||++++|+|.+.+.. ++||||+++|+|
T Consensus       697 ~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~--~~~~~~~l~~l~HpnIv~~~~~~~~~~~~-~lv~Ey~~~g~L  770 (968)
T PLN00113        697 VISRGKKGASYKGKSI---KNGMQFVVKEINDVNSI--PSSEIADMGKLQHPNIVKLIGLCRSEKGA-YLIHEYIEGKNL  770 (968)
T ss_pred             EEccCCCeeEEEEEEC---CCCcEEEEEEccCCccc--cHHHHHHHhhCCCCCcceEEEEEEcCCCC-EEEEeCCCCCcH
Confidence            5899999999999875   35789999998653322  223455 9999999999999999888555 999999999999


Q ss_pred             hhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--------
Q 046594          146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--------  217 (304)
Q Consensus       146 ~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--------  217 (304)
                      .++++    .++|..+..++.|+++||+|||..++++++||||||+||+++.++..++. ||..........        
T Consensus       771 ~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~  845 (968)
T PLN00113        771 SEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYV  845 (968)
T ss_pred             HHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCcccccccc
Confidence            99996    38999999999999999999997768899999999999999998887775 665543322111        


Q ss_pred             CcccccCcccc--ccccc-----------CCCCc-----------------------ceeccccCCCCCCcchHHHHHHH
Q 046594          218 RRNCEKTSEMA--EDIND-----------FVGGQ-----------------------ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       218 ~~~~~~~~~~s--~DV~S-----------~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .+.......++  +||||           ..+..                       ..+|+.+.. ....+.++..++.
T Consensus       846 aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  924 (968)
T PLN00113        846 APETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG-DVSVNQNEIVEVM  924 (968)
T ss_pred             CcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC-CCCccHHHHHHHH
Confidence            11111122333  99999           11100                       122333310 1123456667889


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      +++.+||+     .||++||||.|+++.|+++.+..+
T Consensus       925 ~l~~~Cl~-----~~P~~RPt~~evl~~L~~~~~~~~  956 (968)
T PLN00113        925 NLALHCTA-----TDPTARPCANDVLKTLESASRSSS  956 (968)
T ss_pred             HHHHhhCc-----CCchhCcCHHHHHHHHHHhhcccc
Confidence            99999999     999999999999999999977444

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.97  E-value=6.3e-31  Score=232.50  Aligned_cols=147  Identities=24%  Similarity=0.298  Sum_probs=126.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +.+|++.+.||+|+||.||++.++.   ++..||+|.+.......   .+.+|+. ++.++||||+++++++...+ .++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-~~~   80 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKL---TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-SLT   80 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcC---CCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC-eEE
Confidence            4679999999999999999998763   46899999987543322   5556777 99999999999999998774 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +||||+++ +|.+++......+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++....
T Consensus        81 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          81 LVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             EEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence            99999974 9999888766578999999999999999999965   489999999999999999999999999987653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.97  E-value=6.1e-31  Score=231.00  Aligned_cols=216  Identities=16%  Similarity=0.153  Sum_probs=162.5

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      |+..+.||+|+||.||++.+..   .++.+|+|.+......     ..+..|+. ++.++|+|++++++.+...+ .+++
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~l   77 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-ALCL   77 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcC---CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC-EEEE
Confidence            6788899999999999998874   4689999998653221     14455666 99999999999999998874 5599


Q ss_pred             EEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||||+++++|.+++..... .+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++.....
T Consensus        78 v~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05630          78 VLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  154 (285)
T ss_pred             EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence            9999999999998865443 68999999999999999999965   4899999999999999999999999999876543


Q ss_pred             CCC-Cccccc----------Ccccc--ccccc--------------CCCCcc-----eeccccCCCCCCcchHHHHHHHH
Q 046594          215 GSN-RRNCEK----------TSEMA--EDIND--------------FVGGQE-----CLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       215 ~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ... ....++          ...++  +||||              |.....     ............++...+..+.+
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
T cd05630         155 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARS  234 (285)
T ss_pred             CccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHH
Confidence            322 111222          12222  89999              111110     00000000012334456678999


Q ss_pred             HHHHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      ++.+||+     .||++|||     +.++++|
T Consensus       235 li~~~l~-----~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         235 LCKMLLC-----KDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             HHHHHhh-----cCHHHccCCCCCchHHHHcC
Confidence            9999999     99999999     8899874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.97  E-value=7.4e-31  Score=226.31  Aligned_cols=217  Identities=18%  Similarity=0.203  Sum_probs=165.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|++.+.+|+|+||.+|.+...   .+++.+++|.+.....    ...+.+|+. +++++||||+++++++...+ ..++
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~l   76 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSK---EDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG-NLYI   76 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEc---CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC-eEEE
Confidence            6899999999999999998875   3578999999875321    126777777 99999999999999988774 5599


Q ss_pred             EEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |+||+++++|.+.+..... .+++.++..++.|++.||+|||+   .+++|+||+|+||+++.++.++|+|||++.....
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218          77 VMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence            9999999999999876533 68999999999999999999965   4899999999999999999999999999976644


Q ss_pred             CCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          215 GSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       215 ~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ...  ....+.          ....+  +||||              +...+  +..+..........+...+..+.+++
T Consensus       154 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  233 (256)
T cd08218         154 TVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLV  233 (256)
T ss_pred             chhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHH
Confidence            221  000011          12222  89999              11111  11111110001234455678899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||+     .+|++||++.+++++
T Consensus       234 ~~~l~-----~~p~~Rp~~~~vl~~  253 (256)
T cd08218         234 SQLFK-----RNPRDRPSVNSILEK  253 (256)
T ss_pred             HHHhh-----CChhhCcCHHHHhhC
Confidence            99999     999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.97  E-value=2.4e-30  Score=225.22  Aligned_cols=224  Identities=17%  Similarity=0.178  Sum_probs=164.2

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCC-----
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-----  131 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~-----  131 (304)
                      |++.+.||+|+||.||++..+.....+..+|+|.+......    +.+..|+. ++.++||||+++++++.....     
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            56788999999999999987654445789999998754322    15666777 999999999999998865321     


Q ss_pred             ceEEEEeecCCCChhhHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG-----GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      ..++++||+++|+|.+++....     ..+++...+.++.|++.||+|||+.   +++||||||+||+++.++.++|+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence            2378899999999998875321     1578999999999999999999654   8999999999999999999999999


Q ss_pred             ccccccCCCCC--C--ccccc----------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcc
Q 046594          207 GAANYCSGGSN--R--RNCEK----------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       207 gla~~~~~~~~--~--~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~  253 (304)
                      |+++.......  .  .....          ....+  +||||        ...+.         +.............+
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  237 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP  237 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCC
Confidence            99986643221  0  00000          12223  99999        11011         000000000011223


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ...+..+.+++.+||+     .+|++|||+.++++.|+++
T Consensus       238 ~~~~~~~~~l~~~~l~-----~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         238 PDCLEDVYELMCQCWS-----PEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCCCHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHhh
Confidence            4556789999999999     9999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.9e-31  Score=241.81  Aligned_cols=210  Identities=22%  Similarity=0.207  Sum_probs=170.4

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCCC
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG  143 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~g  143 (304)
                      .+|+|.||+||.++++.+   ...+|||.+.....+.  -+.||+. -+.++|.|||+++|.+..+ +.+-+.||-.+||
T Consensus       582 VLGKGTYG~VYA~RD~~t---qvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen-Gf~kIFMEqVPGG  657 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDT---QVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN-GFFKIFMEQVPGG  657 (1226)
T ss_pred             EeecCceeEEEeeccccc---eeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC-CeEEEEeecCCCC
Confidence            689999999999999754   4789999998766555  6778888 8899999999999998777 5658999999999


Q ss_pred             ChhhHhhhcCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCeeEcccccccccCCCCC--C
Q 046594          144 SLRWNLREKGGPL--DWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAKLAGFGAANYCSGGSN--R  218 (304)
Q Consensus       144 sL~~~l~~~~~~l--~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfgla~~~~~~~~--~  218 (304)
                      +|.++++..=+++  ++.+.-.+.+||++||.|||+.   .|||||||-+|+||+ ..|.+||+|||-++.+..-.+  .
T Consensus       658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE  734 (1226)
T KOG4279|consen  658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE  734 (1226)
T ss_pred             cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence            9999999886677  8889999999999999999776   599999999999997 689999999999987754433  3


Q ss_pred             ccccc-------------Ccccc-cccccCCC-----------Cc-------ceeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          219 RNCEK-------------TSEMA-EDINDFVG-----------GQ-------ECLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       219 ~~~~~-------------~~~~s-~DV~S~~~-----------~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                      +..|+             .||-. +|||||+.           .-       ..+.-.+...-.+.|.+.+.+...+|.+
T Consensus       735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Filr  814 (1226)
T KOG4279|consen  735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILR  814 (1226)
T ss_pred             ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHH
Confidence            33343             33333 99999222           11       2222222223467888999999999999


Q ss_pred             hccccCCCCCCCCCCCHHHHHH
Q 046594          267 CISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       267 cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      |+.     +||.+||++.+++.
T Consensus       815 cFe-----pd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  815 CFE-----PDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HcC-----CCcccCccHHHhcc
Confidence            999     99999999999985

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=8e-31  Score=239.58  Aligned_cols=143  Identities=20%  Similarity=0.172  Sum_probs=125.1

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|+.++.||+|+||.||++.++.   +++.+|+|++.....     ...+.+|+. +++++||||+++++.+.+.+ .+|
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-~~~   77 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVD---TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-NLY   77 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC-EEE
Confidence            58899999999999999998763   578999999875432     115667777 99999999999999998874 559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++..
T Consensus        78 lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~  150 (382)
T cd05625          78 FVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTG  150 (382)
T ss_pred             EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence            9999999999999998765 789999999999999999999654   899999999999999999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=2.2e-30  Score=225.82  Aligned_cols=221  Identities=18%  Similarity=0.296  Sum_probs=167.7

Q ss_pred             HhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|+..+.+|+|+||.||++..+...  .+...+++|........   ..+..|+. +++++|+||+++++++...+.. 
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-   83 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH-   83 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc-
Confidence            57899999999999999999875432  24578999998765544   26777877 9999999999999998877555 


Q ss_pred             EEEEeecCCCChhhHhhhcCC--------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG--------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~--------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                      ++||||+++|+|.+++.....        .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++++|
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~  160 (275)
T cd05046          84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL  160 (275)
T ss_pred             eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence            999999999999999976541        589999999999999999999654   899999999999999999999999


Q ss_pred             cccccccCCCCC---Ccccc-----c-----Ccccc--ccccc--------CCCCc----ceec---------cccCCCC
Q 046594          206 FGAANYCSGGSN---RRNCE-----K-----TSEMA--EDIND--------FVGGQ----ECLD---------QRLYIPN  249 (304)
Q Consensus       206 fgla~~~~~~~~---~~~~~-----~-----~~~~s--~DV~S--------~~~~~----~~~~---------~~~~~~~  249 (304)
                      ||++........   ....+     .     ....+  +||||        +..+.    ...+         ...   .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~---~  237 (275)
T cd05046         161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL---E  237 (275)
T ss_pred             cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc---C
Confidence            999875432211   01000     0     11122  89999        11011    1000         111   1


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      ...+...+..+.+++.+||+     .||.+|||+.+++++|++
T Consensus       238 ~~~~~~~~~~l~~~i~~~l~-----~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         238 LPVPEGCPSRLYKLMTRCWA-----VNPKDRPSFSELVSALGE  275 (275)
T ss_pred             CCCCCCCCHHHHHHHHHHcC-----CCcccCCCHHHHHHHhcC
Confidence            12234456789999999999     999999999999998863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=7e-31  Score=235.11  Aligned_cols=211  Identities=19%  Similarity=0.155  Sum_probs=155.4

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.||+|+||.||++..+   .+++.+|+|++.......     .+..|.. +.++ +||||+++++++... ..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-~~~~lv~e   76 (327)
T cd05617           1 RVIGRGSYAKVLLVRLK---KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT-SRLFLVIE   76 (327)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC-CEEEEEEe
Confidence            46899999999999876   357899999998643221     4555666 6666 799999999998877 45599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC-C
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS-N  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~  217 (304)
                      |+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++...... .
T Consensus        77 ~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  152 (327)
T cd05617          77 YVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT  152 (327)
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc
Confidence            999999999887665 799999999999999999999664   89999999999999999999999999987532211 1


Q ss_pred             -Cccccc----------Ccccc--ccccc-----------CCCCc-----------ceeccccCCCCCCcchHHHHHHHH
Q 046594          218 -RRNCEK----------TSEMA--EDIND-----------FVGGQ-----------ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S-----------~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                       ....++          ...++  +||||           ..+..           +............+|...+..+.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  232 (327)
T cd05617         153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASH  232 (327)
T ss_pred             eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence             112222          22222  99999           11110           000000000012345556678899


Q ss_pred             HHHHhccccCCCCCCCCCCCH------HHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKI------VDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~------~~vl~~  289 (304)
                      ++.+||+     .||.+|+++      .++++|
T Consensus       233 li~~~L~-----~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         233 VLKGFLN-----KDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             HHHHHhc-----cCHHHcCCCCCCCCHHHHHcC
Confidence            9999999     999999984      566654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.97  E-value=4.8e-30  Score=223.12  Aligned_cols=215  Identities=21%  Similarity=0.225  Sum_probs=155.1

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++...+. ..+..+|+|.++......   .+.+|+. +++++||||+++++++.+.... ++||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~lv~e~~~   78 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSG-YTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPY-LLVMEFCP   78 (269)
T ss_pred             CcccccCCceEEEEEEcCC-CCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCc-EEEEECCC
Confidence            4689999999999875432 245789999987654322   6667777 9999999999999999887554 99999999


Q ss_pred             CCChhhHhhhcCC----CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          142 RGSLRWNLREKGG----PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       142 ~gsL~~~l~~~~~----~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      +|+|.+++.....    ..++..+..++.|++.||+|||+.   +++||||||+||+++.+++++|+|||++........
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~  155 (269)
T cd05087          79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY  155 (269)
T ss_pred             CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence            9999999975421    467788889999999999999654   899999999999999999999999999875432211


Q ss_pred             --C--ccccc-----C-------c-----ccc--ccccc--------CCCCc---------c-----eeccccCCCCCCc
Q 046594          218 --R--RNCEK-----T-------S-----EMA--EDIND--------FVGGQ---------E-----CLDQRLYIPNEKF  252 (304)
Q Consensus       218 --~--~~~~~-----~-------~-----~~s--~DV~S--------~~~~~---------~-----~~~~~~~~~~~~~  252 (304)
                        .  ...+.     +       .     ..+  +||||        ...+.         +     ........+....
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (269)
T cd05087         156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRL  235 (269)
T ss_pred             eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCcc
Confidence              0  00000     0       0     112  89999        11011         0     0011111111222


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      ....+..+.+++.+||.      +|++|||+.+|+..|+
T Consensus       236 ~~~~~~~~~~l~~~c~~------~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         236 KLPLSDRWYEVMQFCWL------QPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCChHHHHHHHHHhc------CcccCCCHHHHHHHhc
Confidence            23445678899999987      6999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=3.5e-30  Score=222.24  Aligned_cols=216  Identities=19%  Similarity=0.173  Sum_probs=163.0

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccc-h--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-Q--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|++|.||++.+.........+|+|.+..... .  ..+..|+. +++++||||+++++.+..  ..+++++||++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~   78 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAP   78 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecC
Confidence            468999999999998764322334799999987655 2  26777888 999999999999999887  45599999999


Q ss_pred             CCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---
Q 046594          142 RGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---  217 (304)
Q Consensus       142 ~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---  217 (304)
                      +|+|.+++.... ..+++..++.++.|++.||+|||.   .+++||||||+||+++.++.+||+|||++........   
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  155 (257)
T cd05040          79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV  155 (257)
T ss_pred             CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEecccccccccccccccee
Confidence            999999998765 478999999999999999999965   4899999999999999999999999999987644221   


Q ss_pred             --Ccccc---c-------Ccccc--ccccc--------CCCCc---------ceecccc-CCCCCCcchHHHHHHHHHHH
Q 046594          218 --RRNCE---K-------TSEMA--EDIND--------FVGGQ---------ECLDQRL-YIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       218 --~~~~~---~-------~~~~s--~DV~S--------~~~~~---------~~~~~~~-~~~~~~~~~~~~~~l~~l~~  265 (304)
                        ....+   .       ...++  +||||        +..+.         ++..... .......+...+..+.+++.
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  235 (257)
T cd05040         156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVML  235 (257)
T ss_pred             cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHH
Confidence              00011   1       11222  89999        11011         1000000 00012233445678999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      +||+     .+|++|||+.++++.|.
T Consensus       236 ~~l~-----~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         236 QCWA-----HNPADRPTFAALREFLP  256 (257)
T ss_pred             HHCC-----CCcccCCCHHHHHHHhc
Confidence            9999     99999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.97  E-value=2.1e-30  Score=228.18  Aligned_cols=219  Identities=20%  Similarity=0.138  Sum_probs=164.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .++|++.+.+|.|+||.||++...   .++..+++|.+.......  .+.+|+. ++.++|+|++++++.+..++ .+++
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l   86 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNK---ETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG-KLWI   86 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEEC---CCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC-eEEE
Confidence            367999999999999999999775   356899999987654433  6667777 99999999999999988774 5599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++++|..++.+....+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++......
T Consensus        87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  163 (292)
T cd06644          87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT  163 (292)
T ss_pred             EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence            999999999998887655579999999999999999999965   48999999999999999999999999988654322


Q ss_pred             CC-----Ccccc--c----------Ccccc--ccccc-----------CCCCcc-----eecccc--CCCCCCcchHHHH
Q 046594          216 SN-----RRNCE--K----------TSEMA--EDIND-----------FVGGQE-----CLDQRL--YIPNEKFKITSLA  258 (304)
Q Consensus       216 ~~-----~~~~~--~----------~~~~s--~DV~S-----------~~~~~~-----~~~~~~--~~~~~~~~~~~~~  258 (304)
                      ..     .....  .          ...++  +||||           .+....     ......  ..+....+...+.
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (292)
T cd06644         164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSM  243 (292)
T ss_pred             ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCH
Confidence            11     00000  0          11122  89999           111110     000000  0001122344557


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+.+++.+||+     .||++||++.+++++
T Consensus       244 ~~~~li~~~l~-----~~p~~Rp~~~~il~~  269 (292)
T cd06644         244 EFRDFLKTALD-----KHPETRPSAAQLLEH  269 (292)
T ss_pred             HHHHHHHHHhc-----CCcccCcCHHHHhcC
Confidence            78999999999     999999999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.9e-30  Score=221.19  Aligned_cols=210  Identities=23%  Similarity=0.237  Sum_probs=162.7

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++.+.    +++.+++|........   ..+..|+. +++++|+||+++++++...... ++||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~----~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~-~~v~e~~~   75 (251)
T cd05041           1 EKIGKGNFGDVYKGVLK----GNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPI-YIVMELVP   75 (251)
T ss_pred             CccccCCCceEEEEEEe----CCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCe-EEEEEcCC
Confidence            46899999999999864    2689999998765443   26777888 9999999999999999888544 99999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--C-
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--R-  218 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~-  218 (304)
                      +++|.+++......+++..+..++.+++.||+|||+.   +++||||||+||+++.++.++|+|||++........  . 
T Consensus        76 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  152 (251)
T cd05041          76 GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD  152 (251)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence            9999999977655789999999999999999999654   899999999999999999999999999876542111  0 


Q ss_pred             cc------ccc-----Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          219 RN------CEK-----TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       219 ~~------~~~-----~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ..      ...     .+..+  +||||        ...+.            ..+....   ....+...+..+.+++.
T Consensus       153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~  229 (251)
T cd05041         153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY---RMPAPQLCPEEIYRLML  229 (251)
T ss_pred             ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC---CCCCCccCCHHHHHHHH
Confidence            00      000     12223  89999        11011            1111111   22334456678999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      +||.     .+|.+|||+.++++.|+
T Consensus       230 ~~l~-----~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         230 QCWA-----YDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHhc-----cChhhCcCHHHHHHHhh
Confidence            9999     99999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.5e-30  Score=235.77  Aligned_cols=141  Identities=19%  Similarity=0.310  Sum_probs=121.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      .+|++.+.||+|+||.||++...+   .+..||+|......   .+ .|+. +++++|+||+++++++...+.. ++|+|
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~valK~~~~~~---~~-~E~~~l~~l~h~~iv~~~~~~~~~~~~-~lv~e  137 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPG---QPDPVVLKIGQKGT---TL-IEAMLLQNVNHPSVIRMKDTLVSGAIT-CMVLP  137 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECC---CCceEEEEeCCccc---cH-HHHHHHHhCCCCCCcChhheEEeCCee-EEEEE
Confidence            479999999999999999998764   46789999754322   23 3455 9999999999999999887554 99999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |+. ++|.+++......+++..+..++.|++.||+|||..   +|+||||||+|||++.++.++|+|||+++..
T Consensus       138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence            995 599998877666899999999999999999999654   8999999999999999999999999999754

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.3e-30  Score=222.75  Aligned_cols=218  Identities=21%  Similarity=0.209  Sum_probs=166.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .+|++.+.+|+|+||.||++....   ++..+++|.........  .+..|+. +++++||||+++++++...+ .++++
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~l~   78 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIA---TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD-KLWIV   78 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecC---CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC-EEEEE
Confidence            478999999999999999998753   46789999988654333  6777777 99999999999999988874 45999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|.+++......+++..+..++.|++.||+|||+.   +++|+||+|+||+++.++.++|+|||++.......
T Consensus        79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  155 (262)
T cd06613          79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI  155 (262)
T ss_pred             EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence            999999999999987645899999999999999999999654   89999999999999999999999999987654322


Q ss_pred             C--Cc---c-------cccCc---ccc--ccccc-----------CCCCcc---------eeccccCCCCCCcchHHHHH
Q 046594          217 N--RR---N-------CEKTS---EMA--EDIND-----------FVGGQE---------CLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       217 ~--~~---~-------~~~~~---~~s--~DV~S-----------~~~~~~---------~~~~~~~~~~~~~~~~~~~~  259 (304)
                      .  ..   .       .....   ..+  +||||           .++..+         .....+..+....+...+..
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (262)
T cd06613         156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPV  235 (262)
T ss_pred             hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHH
Confidence            1  00   0       00011   233  89999           111110         00011100011223445678


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+++.+||.     .||.+|||+.+++++
T Consensus       236 ~~~li~~~l~-----~~p~~Rpt~~~il~~  260 (262)
T cd06613         236 FHDFIKKCLT-----KDPKKRPTATKLLQH  260 (262)
T ss_pred             HHHHHHHHcC-----CChhhCCCHHHHhcC
Confidence            9999999999     999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.97  E-value=1.8e-30  Score=227.14  Aligned_cols=212  Identities=14%  Similarity=0.110  Sum_probs=158.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .|+..+.||+|+||.||++.+.   .+++.+|+|........   ..+.+|+. +++++||||+++++++...+.. ++|
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~lv   77 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHL---LTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRI-SIC   77 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEc---CCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEE-EEE
Confidence            5788899999999999999875   35789999998754322   26667777 9999999999999999887544 999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|..+.     .+++..+..++.|++.||+|||+.   +++|+||||+|||++.++.++|+|||++.......
T Consensus        78 ~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~  149 (279)
T cd06619          78 TEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI  149 (279)
T ss_pred             EecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence            9999999996542     578899999999999999999764   89999999999999999999999999997654332


Q ss_pred             CCccccc----------Ccccc--ccccc-----------CCCCcce------------eccccCCCCCCc-chHHHHHH
Q 046594          217 NRRNCEK----------TSEMA--EDIND-----------FVGGQEC------------LDQRLYIPNEKF-KITSLAKL  260 (304)
Q Consensus       217 ~~~~~~~----------~~~~s--~DV~S-----------~~~~~~~------------~~~~~~~~~~~~-~~~~~~~l  260 (304)
                      .....++          ...++  +||||           ..+....            ............ ....+..+
T Consensus       150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (279)
T cd06619         150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF  229 (279)
T ss_pred             ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHH
Confidence            2111121          11222  89999           1111000            000000000111 12345678


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+++.+||+     .||++||++.+++++
T Consensus       230 ~~li~~~l~-----~~P~~Rp~~~eil~~  253 (279)
T cd06619         230 VHFITQCMR-----KQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHHhh-----CChhhCCCHHHHhcC
Confidence            999999999     999999999999986

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=1.7e-30  Score=225.47  Aligned_cols=216  Identities=19%  Similarity=0.168  Sum_probs=164.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----------hHHHHHHH-hhCCCCCcccceeeeeeC
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----------TKLEEEIL-LKSSSHLNIVTLLGYPQD  128 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~e~~-l~~l~h~niv~~~~~~~~  128 (304)
                      +|.+.+.+|+|++|.||.+.+.   .++..+|+|.+......           ..+++|+. +++++||||+++++++..
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   77 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNA---SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD   77 (267)
T ss_pred             CccccceeecCCCeEEEEEEec---CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe
Confidence            5788899999999999999875   34689999988653221           15667777 999999999999999988


Q ss_pred             CCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          129 GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       129 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      .+.. ++++||+++++|.+++...+ .+++..+..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||+
T Consensus        78 ~~~~-~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~  152 (267)
T cd06628          78 ADHL-NIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGI  152 (267)
T ss_pred             CCcc-EEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCC
Confidence            7544 99999999999999998765 789999999999999999999754   899999999999999999999999999


Q ss_pred             ccccCCCCC----C----ccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCc
Q 046594          209 ANYCSGGSN----R----RNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKF  252 (304)
Q Consensus       209 a~~~~~~~~----~----~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~  252 (304)
                      ++.......    .    ...+.          ....+  +||||              |....  ..+...........
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  232 (267)
T cd06628         153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEI  232 (267)
T ss_pred             CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcC
Confidence            887652211    0    00111          11222  89999              11111  00000000112345


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +...+..+.+++.+||+     .||.+||++.+++++
T Consensus       233 ~~~~~~~~~~li~~~l~-----~~p~~Rp~~~~il~~  264 (267)
T cd06628         233 PSNISSEAIDFLEKTFE-----IDHNKRPTAAELLKH  264 (267)
T ss_pred             CcccCHHHHHHHHHHcc-----CCchhCcCHHHHhhC
Confidence            55667889999999999     999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.97  E-value=3.4e-31  Score=228.54  Aligned_cols=215  Identities=28%  Similarity=0.312  Sum_probs=161.5

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      |++.+.||+|+||.||++...   .+++.+|+|.+.......    ....|.. ++.++||||+++++++... ...+++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~---~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~~v   76 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNK---KNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD-NYLYIV   76 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEET---TTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES-SEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEEC---CCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc-cccccc
Confidence            788999999999999999987   356799999999876554    2223566 8888999999999999886 445999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|.+++.... .+++..++.++.|+++||++||+.   +++|+||||+||+++.++.++|+|||.+.......
T Consensus        77 ~~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~  152 (260)
T PF00069_consen   77 MEYCPGGSLQDYLQKNK-PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN  152 (260)
T ss_dssp             EEEETTEBHHHHHHHHS-SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred             ccccccccccccccccc-cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            99999999999998444 799999999999999999999775   89999999999999999999999999997531111


Q ss_pred             C--Cccccc---------C--cccc--ccccc--------------CCCCc-----ceeccccCCC-CCC--cchHHHHH
Q 046594          217 N--RRNCEK---------T--SEMA--EDIND--------------FVGGQ-----ECLDQRLYIP-NEK--FKITSLAK  259 (304)
Q Consensus       217 ~--~~~~~~---------~--~~~s--~DV~S--------------~~~~~-----~~~~~~~~~~-~~~--~~~~~~~~  259 (304)
                      .  ....++         .  ...+  +||||              +....     ..+....... ...  ........
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (260)
T PF00069_consen  153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEE  232 (260)
T ss_dssp             SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHH
Confidence            1  111111         1  2222  99999              11110     1111111000 000  00111378


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+++.+||+     .||++|||+.+++++
T Consensus       233 l~~li~~~l~-----~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  233 LRDLIKKMLS-----KDPEQRPSAEELLKH  257 (260)
T ss_dssp             HHHHHHHHSS-----SSGGGSTTHHHHHTS
T ss_pred             HHHHHHHHcc-----CChhHCcCHHHHhcC
Confidence            9999999999     999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.97  E-value=9.6e-31  Score=233.82  Aligned_cols=214  Identities=17%  Similarity=0.152  Sum_probs=156.6

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCC-CCcccceeeeeeCCCCceE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~  134 (304)
                      |+..+.||+|+||.||++.++.   +++.||+|++......     ..+..|.. ++.+. |++|+++++++... +.+|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-~~~~   77 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV-DRLY   77 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-CEEE
Confidence            6778899999999999998763   5789999998754211     13444455 66664 57788888888777 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++.... .+++.++..++.|++.||+|||+.   +++||||||+|||++.++.++|+|||+++....
T Consensus        78 lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~  153 (323)
T cd05615          78 FVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV  153 (323)
T ss_pred             EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence            9999999999999988765 799999999999999999999654   899999999999999999999999999876432


Q ss_pred             CCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          215 GSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       215 ~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ...  ....++          ...++  +||||              |....  ....... .....++...+..+.+++
T Consensus       154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~li  232 (323)
T cd05615         154 DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM-EHNVSYPKSLSKEAVSIC  232 (323)
T ss_pred             CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH-hCCCCCCccCCHHHHHHH
Confidence            211  111122          22223  89999              11111  1111111 001234555677889999


Q ss_pred             HHhccccCCCCCCCCCCCH-----HHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKI-----VDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~-----~~vl~~  289 (304)
                      .+||+     .||.+|++.     .++.+|
T Consensus       233 ~~~l~-----~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05615         233 KGLMT-----KHPSKRLGCGPEGERDIREH  257 (323)
T ss_pred             HHHcc-----cCHhhCCCCCCCCHHHHhcC
Confidence            99999     999999984     455554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-31  Score=242.98  Aligned_cols=217  Identities=20%  Similarity=0.203  Sum_probs=169.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .|.+++.||.|+||.||++..+.+   +...|-|++......+  .|.-|+. |+...||+||++++.|... +.+|+..
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket---~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e-nkLwili  108 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKET---KLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE-NKLWILI  108 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccc---hhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc-CceEEEE
Confidence            467889999999999999998743   4667788887655554  7777777 9999999999999988877 5559999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      |||.||-.+.++-..+.+|.+.++..++.|++.||.|||+   ++|||||||..|||++-+|.++|+|||.+........
T Consensus       109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q  185 (1187)
T KOG0579|consen  109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ  185 (1187)
T ss_pred             eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhHHh
Confidence            9999999999988887799999999999999999999954   4899999999999999999999999998865433221


Q ss_pred             --Cccccc-----------------CcccccccccC-----------CCCcc--eeccccCC-----CCCCcchHHHHHH
Q 046594          218 --RRNCEK-----------------TSEMAEDINDF-----------VGGQE--CLDQRLYI-----PNEKFKITSLAKL  260 (304)
Q Consensus       218 --~~~~~~-----------------~~~~s~DV~S~-----------~~~~~--~~~~~~~~-----~~~~~~~~~~~~l  260 (304)
                        -+..|+                 ++.+.+||||+           |+..+  .+.-.+++     |..--|...+..+
T Consensus       186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F  265 (1187)
T KOG0579|consen  186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSF  265 (1187)
T ss_pred             hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHH
Confidence              122222                 44444999992           22221  11111111     1122355677889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+++.+||.     +||..||+++++++|
T Consensus       266 ~DfLk~cL~-----Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  266 SDFLKRCLV-----KNPRNRPPAAQLLKH  289 (1187)
T ss_pred             HHHHHHHHh-----cCCccCCCHHHHhhC
Confidence            999999999     999999999999986

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.97  E-value=1.1e-30  Score=228.79  Aligned_cols=146  Identities=24%  Similarity=0.310  Sum_probs=125.0

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ||+..+.||+|+||.||++.++.   +|..+|+|.++.....    ..+..|+. +++++||||+++++++.+.. .+++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~---~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-~~~l   76 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK-KLTL   76 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECC---CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC-ceEE
Confidence            58899999999999999998863   5789999998754322    24556777 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ++||+++ +|.+++......+++..++.++.|+++||+|||+.   +++||||||+||+++.++.++|+|||++.....
T Consensus        77 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  151 (284)
T cd07839          77 VFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGI  151 (284)
T ss_pred             EEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence            9999975 88888876555799999999999999999999764   899999999999999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.6e-30  Score=225.81  Aligned_cols=228  Identities=21%  Similarity=0.173  Sum_probs=178.6

Q ss_pred             HHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHH-HHHH-hhCCCCCcccceeeeeeCCCC--
Q 046594           56 LAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE-EEIL-LKSSSHLNIVTLLGYPQDGLQ--  131 (304)
Q Consensus        56 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~-~e~~-l~~l~h~niv~~~~~~~~~~~--  131 (304)
                      -.+.+.-++.+.+|+|.||.||++.++     |+.||||++....+..-|+ .|+. -..++|+||..+++.-..+.+  
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wr-----Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~  281 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWR-----GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW  281 (513)
T ss_pred             HhhhheeEEEEEecCccccceeecccc-----CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence            344556677899999999999999997     6899999999877777444 4444 667799999999998654433  


Q ss_pred             -ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhh-----cCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          132 -RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCM-----YSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       132 -~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~-----~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                       .+|||++|.++|||+|+|.+.  .++....++++..+|.||++||.     ..++.|.|||||+.||||..+++.-|+|
T Consensus       282 TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD  359 (513)
T KOG2052|consen  282 TQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  359 (513)
T ss_pred             EEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence             479999999999999999985  69999999999999999999994     3567899999999999999999999999


Q ss_pred             cccccccCCCCC------CcccccCcccc------------------ccccc----------------------------
Q 046594          206 FGAANYCSGGSN------RRNCEKTSEMA------------------EDIND----------------------------  233 (304)
Q Consensus       206 fgla~~~~~~~~------~~~~~~~~~~s------------------~DV~S----------------------------  233 (304)
                      +|||........      ....|+..||+                  +||||                            
T Consensus       360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~  439 (513)
T KOG2052|consen  360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV  439 (513)
T ss_pred             ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence            999976654422      33455533333                  89999                            


Q ss_pred             ---CCCCc----ceeccccCCCCCCc-----chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          234 ---FVGGQ----ECLDQRLYIPNEKF-----KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       234 ---~~~~~----~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                         .|..+    -+..+++   +..+     .......+.++|+.||.     .||..|-|+-.+.+.|.++.+.++
T Consensus       440 Vp~DPs~eeMrkVVCv~~~---RP~ipnrW~s~~~l~~m~klMkeCW~-----~Np~aRltALriKKtl~~l~~~~e  508 (513)
T KOG2052|consen  440 VPSDPSFEEMRKVVCVQKL---RPNIPNRWKSDPALRVMAKLMKECWY-----ANPAARLTALRIKKTLAKLSNSDE  508 (513)
T ss_pred             CCCCCCHHHHhcceeeccc---CCCCCcccccCHHHHHHHHHHHHhhc-----CCchhhhHHHHHHHHHHHHhcChh
Confidence               11111    1222333   2222     24556778999999999     999999999999999999987554

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.9e-30  Score=232.66  Aligned_cols=219  Identities=18%  Similarity=0.102  Sum_probs=160.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|+||.||++..+   .+++.+|+|++.....     ...+.+|.. +..++|+||+++++++.++ ..+|
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~   77 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMK---NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE-NNLY   77 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEEC---CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC-CeEE
Confidence            6899999999999999999876   3578999999874221     115677777 8899999999999999887 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             EEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence            99999999999999987555799999999999999999999654   899999999999999999999999999876543


Q ss_pred             CCC---Cccccc---------------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcch
Q 046594          215 GSN---RRNCEK---------------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKI  254 (304)
Q Consensus       215 ~~~---~~~~~~---------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~  254 (304)
                      ...   ....++               ...++  +||||              |....      .+..............
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  234 (331)
T cd05597         155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVT  234 (331)
T ss_pred             CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccC
Confidence            222   111122               01222  89999              11111      1111110000011112


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+..+.+++.+|+..   ..++..||++.++++|
T Consensus       235 ~~~~~~~~li~~ll~~---~~~r~~r~~~~~~l~h  266 (331)
T cd05597         235 DVSEEAKDLIRRLICS---PETRLGRNGLQDFKDH  266 (331)
T ss_pred             CCCHHHHHHHHHHccC---cccccCCCCHHHHhcC
Confidence            3567788999987760   0444458999999988

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.7e-30  Score=234.03  Aligned_cols=151  Identities=21%  Similarity=0.221  Sum_probs=125.5

Q ss_pred             HHHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           55 TLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        55 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      .+-+..+|++.+.||+|+||.||++.+.   .++..||+|++......    ..+.+|+. ++.++||||+++++++...
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (343)
T cd07878          10 VWEVPERYQNLTPVGSGAYGSVCSAYDT---RLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA   86 (343)
T ss_pred             HhhhhhhhhhheecccCCCeEEEEEEEC---CCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence            3445689999999999999999999875   35689999998754322    14556677 9999999999999987543


Q ss_pred             C-----CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          130 L-----QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       130 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      .     ...|+++|++ +++|.+++...  .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~  160 (343)
T cd07878          87 TSIENFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL  160 (343)
T ss_pred             ccccccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence            1     3358999998 67998887643  699999999999999999999764   89999999999999999999999


Q ss_pred             ccccccccCC
Q 046594          205 GFGAANYCSG  214 (304)
Q Consensus       205 Dfgla~~~~~  214 (304)
                      |||+++....
T Consensus       161 Dfg~~~~~~~  170 (343)
T cd07878         161 DFGLARQADD  170 (343)
T ss_pred             CCccceecCC
Confidence            9999987644

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.97  E-value=2.6e-30  Score=228.19  Aligned_cols=216  Identities=20%  Similarity=0.212  Sum_probs=164.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .++|+..+.+|.|++|.||++.+.   .+++.+++|.+.......  .+.+|+. ++.++|||++++++++... ..+++
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~l   93 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDV---ATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG-DELFV   93 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEc---CCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecC-ceEEE
Confidence            457999999999999999998765   357899999987543332  6667777 9999999999999999877 45599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |+||+++++|.+++...  .+++.++..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        94 v~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~  168 (296)
T cd06655          94 VMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE  168 (296)
T ss_pred             EEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence            99999999999988754  589999999999999999999664   8999999999999999999999999998765433


Q ss_pred             CC--Cccccc----------Ccccc--ccccc--------------CCCCcc-----eeccccCCCCCCcchHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND--------------FVGGQE-----CLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ..  ....++          ....+  +||||              |.....     ...... .+....+...+..+.+
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  247 (296)
T cd06655         169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPELQNPEKLSPIFRD  247 (296)
T ss_pred             cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CcccCCcccCCHHHHH
Confidence            22  111111          12222  99999              111110     000000 0012234455678999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||.     .||.+|||+.+++++
T Consensus       248 li~~~l~-----~dp~~Rpt~~~il~~  269 (296)
T cd06655         248 FLNRCLE-----MDVEKRGSAKELLQH  269 (296)
T ss_pred             HHHHHhh-----cChhhCCCHHHHhhC
Confidence            9999999     999999999999963

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.97  E-value=3.2e-30  Score=234.68  Aligned_cols=215  Identities=15%  Similarity=0.128  Sum_probs=163.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++.   .++.+|+|++.....     ...+.+|.. ++.++||||+++++.+..+ ..
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~-~~  117 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKS---TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD-RY  117 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECC---CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC-CE
Confidence            4789999999999999999998863   578999999864221     115566777 8899999999999999877 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++...  .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~  192 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence            59999999999999998765  589999999999999999999654   8999999999999999999999999999866


Q ss_pred             CCCCC---Cccccc--------------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcc
Q 046594          213 SGGSN---RRNCEK--------------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       213 ~~~~~---~~~~~~--------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~  253 (304)
                      .....   ....++              .+.++  +||||              |....      .+....-   ...++
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~---~~~~~  269 (371)
T cd05622         193 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN---SLTFP  269 (371)
T ss_pred             CcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---cccCC
Confidence            43221   111222              11233  99999              11111      1111110   11122


Q ss_pred             --hHHHHHHHHHHHHhccccCCCCCCCC--CCCHHHHHHHH
Q 046594          254 --ITSLAKLGDIEKWCISCCSNIEGNEN--HPKIVDVLSGL  290 (304)
Q Consensus       254 --~~~~~~l~~l~~~cl~~~~~~~dp~~--Rps~~~vl~~L  290 (304)
                        ...+..+.+++.+|+.     .++.+  ||++.++++|.
T Consensus       270 ~~~~~s~~~~~li~~~L~-----~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         270 DDNDISKEAKNLICAFLT-----DREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             CcCCCCHHHHHHHHHHcC-----ChhhhcCCCCHHHHhcCc
Confidence              3467788999999998     66654  88999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.8e-30  Score=232.68  Aligned_cols=208  Identities=16%  Similarity=0.166  Sum_probs=148.7

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccch---h---HHHHHHHhhC-C--CCCcccceeeeeeCCCCceEEEEe
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---T---KLEEEILLKS-S--SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~---~~~~e~~l~~-l--~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      ||+|+||.||++.++   .+++.+|+|++......   .   .+.+...+.. .  +||||+++++++...+ .+|+|||
T Consensus         1 lG~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~-~~~lv~e   76 (330)
T cd05586           1 IGKGTFGQVYQVRKK---DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS-DLYLVTD   76 (330)
T ss_pred             CCCCCceEEEEEEEC---CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC-eEEEEEc
Confidence            699999999999876   35789999998643211   1   2223333333 3  7999999999998874 4599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.++|+|||++........ 
T Consensus        77 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~  152 (330)
T cd05586          77 YMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT  152 (330)
T ss_pred             CCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC
Confidence            999999999988765 799999999999999999999654   899999999999999999999999999876432211 


Q ss_pred             -Cccccc-----------Ccccc--cccccCCC--------------Cc--ceeccccCCCCCCcc-hHHHHHHHHHHHH
Q 046594          218 -RRNCEK-----------TSEMA--EDINDFVG--------------GQ--ECLDQRLYIPNEKFK-ITSLAKLGDIEKW  266 (304)
Q Consensus       218 -~~~~~~-----------~~~~s--~DV~S~~~--------------~~--~~~~~~~~~~~~~~~-~~~~~~l~~l~~~  266 (304)
                       ....++           ...++  +||||++-              ..  +... .+......++ ...+..+.+++.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~li~~  231 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYR-NIAFGKVRFPKNVLSDEGRQFVKG  231 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHH-HHHcCCCCCCCccCCHHHHHHHHH
Confidence             111222           11123  99999111              00  1100 0000011122 1245778899999


Q ss_pred             hccccCCCCCCCCCC----CHHHHHHH
Q 046594          267 CISCCSNIEGNENHP----KIVDVLSG  289 (304)
Q Consensus       267 cl~~~~~~~dp~~Rp----s~~~vl~~  289 (304)
                      ||.     .||.+||    ++.++++|
T Consensus       232 ~L~-----~~P~~R~~~~~~~~~ll~h  253 (330)
T cd05586         232 LLN-----RNPQHRLGAHRDAVELKEH  253 (330)
T ss_pred             HcC-----CCHHHCCCCCCCHHHHhcC
Confidence            999     9999998    56777664

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=2.1e-31  Score=242.42  Aligned_cols=213  Identities=17%  Similarity=0.186  Sum_probs=168.2

Q ss_pred             ccccccCCccccceeeecceeecCCCcEEEEEEeccc---cch---hHHHHHHH-hhCCCCCcccceeeeeeCCCC-ceE
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYM---ASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-RRC  134 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~---~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~-~~~  134 (304)
                      +....||+|+|-+||++.+..   +|..||.--++..   ...   .+|.+|+. |+.|+||||++++.+|.+..+ .+.
T Consensus        43 k~~evLGrGafKtVYka~De~---~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in  119 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEE---EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTIN  119 (632)
T ss_pred             ehhhhcccccceeeeeccccc---cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceee
Confidence            445689999999999999853   4566665444322   111   27888888 999999999999999988755 357


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~~  213 (304)
                      +|+|.+..|+|..++.+.+ .++......|++||++||.|||. |.++|||||||.+||||+. .|.+||+|+|||....
T Consensus       120 ~iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r  197 (632)
T KOG0584|consen  120 FITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR  197 (632)
T ss_pred             eeeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence            8999999999999999988 79999999999999999999999 6789999999999999985 5899999999999988


Q ss_pred             CCCCCcccccCcccc-----------ccccc------------CCCCc---------ceeccccCCCCCCcchHHHHHHH
Q 046594          214 GGSNRRNCEKTSEMA-----------EDIND------------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       214 ~~~~~~~~~~~~~~s-----------~DV~S------------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ........|++..|+           .||||            +|-.+         .++....   +..+..-..++++
T Consensus       198 ~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiK---P~sl~kV~dPevr  274 (632)
T KOG0584|consen  198 KSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIK---PAALSKVKDPEVR  274 (632)
T ss_pred             ccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCC---HHHhhccCCHHHH
Confidence            777655667755555           89999            22222         1222221   2223333457899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +||.+|+.     . ..+|||+.|+|++
T Consensus       275 ~fIekCl~-----~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  275 EFIEKCLA-----T-KSERLSAKELLKD  296 (632)
T ss_pred             HHHHHHhc-----C-chhccCHHHHhhC
Confidence            99999999     7 9999999999974

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=1.5e-30  Score=236.98  Aligned_cols=144  Identities=22%  Similarity=0.217  Sum_probs=122.1

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC----Cc
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL----QR  132 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~----~~  132 (304)
                      |++.+.||+|+||.||++.+.   .+++.||+|++......    ..+.+|+. ++.++|+||+++++++...+    ..
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   78 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDP---RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEE   78 (372)
T ss_pred             CcccceeeeCCCEEEEEEEEC---CCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccce
Confidence            678899999999999999875   45799999998653221    25566777 99999999999999987764    25


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+|+||+.+ +|.+.+.... .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++..
T Consensus        79 ~~lv~e~~~~-~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          79 IYVVTELMQS-DLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEEEeecccc-CHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence            6999999964 8888886655 799999999999999999999654   8999999999999999999999999999865


Q ss_pred             C
Q 046594          213 S  213 (304)
Q Consensus       213 ~  213 (304)
                      .
T Consensus       154 ~  154 (372)
T cd07853         154 E  154 (372)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=1.8e-30  Score=227.42  Aligned_cols=145  Identities=25%  Similarity=0.288  Sum_probs=123.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .|++.+.||+|++|.||++.++   .++..+|+|.+......    ..+.+|+. ++.++||||+++++++..+ ..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~~   76 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNK---KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE-SRLYL   76 (285)
T ss_pred             CceEeeEecccCceEEEEEEEC---CCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-CeEEE
Confidence            3788899999999999999875   35789999998754322    25667777 9999999999999999887 45599


Q ss_pred             EEeecCCCChhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKG--GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ||||++ ++|.+++....  ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++....
T Consensus        77 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861          77 IFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFG  152 (285)
T ss_pred             EEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence            999997 58988886543  378999999999999999999965   489999999999999999999999999987553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2e-30  Score=240.98  Aligned_cols=144  Identities=26%  Similarity=0.269  Sum_probs=123.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|.+.+.||+|+||.||++.+..   .++.||||.....    .+..|+. +++++|+||+++++++..++.. ++||
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~---~~~~vavK~~~~~----~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~-~lv~  239 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPD---YPQRVVVKAGWYA----SSVHEARLLRRLSHPAVLALLDVRVVGGLT-CLVL  239 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECC---CCCEEEEeccccc----CHHHHHHHHHHCCCCCCCcEEEEEEECCEE-EEEE
Confidence            4479999999999999999998864   4689999964322    3445666 9999999999999998887555 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |++. ++|.+++......+++..++.++.|++.||+|||..   +|+||||||+|||++.++.++|+|||+++....
T Consensus       240 e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        240 PKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG  312 (461)
T ss_pred             EccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence            9995 699998877655799999999999999999999654   899999999999999999999999999986643

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.97  E-value=3.2e-30  Score=231.25  Aligned_cols=214  Identities=18%  Similarity=0.120  Sum_probs=160.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|+||.||++.++.   .++.+|+|.+......     ..+.+|.. +..++|+||+++++++.+.+ ..|
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~-~~~   77 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKH---TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN-YLY   77 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-EEE
Confidence            68999999999999999998763   5689999998653211     15667777 88999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        78 lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  154 (331)
T cd05624          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             EEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence            99999999999999987555799999999999999999999654   899999999999999999999999999976643


Q ss_pred             CCC---Cccccc----------C-----cccc--ccccc--------------CCCCc------ceeccccCCCCCCcc-
Q 046594          215 GSN---RRNCEK----------T-----SEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFK-  253 (304)
Q Consensus       215 ~~~---~~~~~~----------~-----~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~-  253 (304)
                      ...   ....++          .     +.++  +||||              |....      .+.....   +..++ 
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~---~~~~p~  231 (331)
T cd05624         155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE---RFQFPS  231 (331)
T ss_pred             CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCC---cccCCC
Confidence            322   111122          1     2233  89999              11111      1111111   11122 


Q ss_pred             --hHHHHHHHHHHHHhccccCCCCCCCC--CCCHHHHHHH
Q 046594          254 --ITSLAKLGDIEKWCISCCSNIEGNEN--HPKIVDVLSG  289 (304)
Q Consensus       254 --~~~~~~l~~l~~~cl~~~~~~~dp~~--Rps~~~vl~~  289 (304)
                        .+.+..+.+++.+|+.     .++.+  |+++.++++|
T Consensus       232 ~~~~~~~~~~~li~~ll~-----~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         232 HITDVSEEAKDLIQRLIC-----SRERRLGQNGIEDFKKH  266 (331)
T ss_pred             ccccCCHHHHHHHHHHcc-----CchhhcCCCCHHHHhcC
Confidence              2346789999999998     66544  5689999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.97  E-value=7.2e-30  Score=223.05  Aligned_cols=213  Identities=18%  Similarity=0.187  Sum_probs=165.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..|+..+.+|.|+||.||.+.+..   .+..+|+|.........   .+.+|+. ++.++|+||+++++++.+++ .+++
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l   79 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNR---TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT-KLWI   79 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEcc---CCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-EEEE
Confidence            468889999999999999998763   46899999987543322   6667777 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++...  ++++.++..++.|++.||+|||+   .+++|+||+|+||+++.++.++|+|||++......
T Consensus        80 v~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06640          80 IMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT  154 (277)
T ss_pred             EEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence            99999999999998753  68999999999999999999965   48999999999999999999999999999765432


Q ss_pred             CC--Cccccc----------Ccccc--ccccc-----------CCCCc--------ceeccccCCCCCCcchHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND-----------FVGGQ--------ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S-----------~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ..  ....++          ....+  +||||           .....        .......   ....+...+..+.+
T Consensus       155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  231 (277)
T cd06640         155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---PPTLTGEFSKPFKE  231 (277)
T ss_pred             ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC---CCCCchhhhHHHHH
Confidence            21  000011          12223  99999           11111        0111111   23445567788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||+     .+|++||++.+++++
T Consensus       232 li~~~l~-----~~p~~Rp~~~~il~~  253 (277)
T cd06640         232 FIDACLN-----KDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHcc-----cCcccCcCHHHHHhC
Confidence            9999999     999999999999887

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1.4e-30  Score=254.67  Aligned_cols=222  Identities=18%  Similarity=0.201  Sum_probs=164.2

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCC-CC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDG-LQ  131 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~-~~  131 (304)
                      .+.+|++.+.||+|+||.||++.++.   .+..+|+|.+......    ..+..|+. ++.++||||++++++|... ..
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~---tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~   87 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKR---TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ   87 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECC---CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence            35689999999999999999998863   4689999998754322    26667777 9999999999999988654 34


Q ss_pred             ceEEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcC----CCCeeecCCCCCCeeeCC-------
Q 046594          132 RRCLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYS----KPPIYHGNITSDNILLDE-------  197 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~----~~~ivH~dlkp~Nill~~-------  197 (304)
                      .+||||||+++|+|.++|...   ...+++..++.|+.||+.||+|||...    .++|+||||||+||||+.       
T Consensus        88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~  167 (1021)
T PTZ00266         88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK  167 (1021)
T ss_pred             EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence            569999999999999998753   237999999999999999999998743    256999999999999964       


Q ss_pred             ----------CCCeeEcccccccccCCCCC-Cccccc------------Ccccc--ccccc--------------CCCCc
Q 046594          198 ----------LCNAKLAGFGAANYCSGGSN-RRNCEK------------TSEMA--EDIND--------------FVGGQ  238 (304)
Q Consensus       198 ----------~~~~kl~Dfgla~~~~~~~~-~~~~~~------------~~~~s--~DV~S--------------~~~~~  238 (304)
                                .+.+||+|||++........ ....++            ...++  +||||              |....
T Consensus       168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~  247 (1021)
T PTZ00266        168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN  247 (1021)
T ss_pred             ccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence                      23589999999987643322 111122            12233  89999              21111


Q ss_pred             ---ceeccccCCCCCCcc-hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          239 ---ECLDQRLYIPNEKFK-ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       239 ---~~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                         .++.... . ...++ ...+..+.+|+.+||.     .+|.+||++.|++.+
T Consensus       248 ~~~qli~~lk-~-~p~lpi~~~S~eL~dLI~~~L~-----~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        248 NFSQLISELK-R-GPDLPIKGKSKELNILIKNLLN-----LSAKERPSALQCLGY  295 (1021)
T ss_pred             cHHHHHHHHh-c-CCCCCcCCCCHHHHHHHHHHhc-----CChhHCcCHHHHhcc
Confidence               1111100 0 01111 2345789999999999     999999999999953

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.97  E-value=2.1e-30  Score=237.45  Aligned_cols=149  Identities=26%  Similarity=0.286  Sum_probs=126.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCC-C-----CcccceeeeeeCCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSS-H-----LNIVTLLGYPQDGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~-h-----~niv~~~~~~~~~~~~  132 (304)
                      ||.+++.||+|.||.|.+|.++.   .++.||||+++....-- +-..|+. |..++ |     -|+|+++++|... ++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~---T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr-~H  262 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHK---TGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR-NH  262 (586)
T ss_pred             EEEEEEEecccccceeEEEEecC---CCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc-cc
Confidence            78889999999999999999985   47999999999765443 4445555 77775 4     4899999999998 56


Q ss_pred             eEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC--CCeeEcccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL--CNAKLAGFGAA  209 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~--~~~kl~Dfgla  209 (304)
                      +|||+|.++. +|.++++.+.. +++...+..++.||+.||.+||+.   +|||+||||+||||...  ..+|++|||.|
T Consensus       263 lciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSS  338 (586)
T KOG0667|consen  263 LCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSS  338 (586)
T ss_pred             eeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccc
Confidence            6999999976 99999998765 899999999999999999999765   89999999999999743  48999999999


Q ss_pred             cccCCCCC
Q 046594          210 NYCSGGSN  217 (304)
Q Consensus       210 ~~~~~~~~  217 (304)
                      .+......
T Consensus       339 c~~~q~vy  346 (586)
T KOG0667|consen  339 CFESQRVY  346 (586)
T ss_pred             cccCCcce
Confidence            98876554

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.97  E-value=4.2e-30  Score=225.31  Aligned_cols=220  Identities=18%  Similarity=0.201  Sum_probs=161.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCC-CCCcccceeeeeeC----CCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSS-SHLNIVTLLGYPQD----GLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l-~h~niv~~~~~~~~----~~~  131 (304)
                      ..+|++.+.||+|+||.||++...   ..++.+|+|........ ..+..|.. ++.+ +||||+++++++..    .++
T Consensus        17 ~~~~~~~~~lg~g~~~~vy~~~~~---~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   93 (286)
T cd06638          17 SDTWEIIETIGKGTYGKVFKVLNK---KNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGD   93 (286)
T ss_pred             ccceeeeeeeccCCCcEEEEEEEC---CCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCC
Confidence            458999999999999999998875   35689999998754333 35666777 8888 79999999998753    234


Q ss_pred             ceEEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      .+++||||+++++|.+++...   ...+++..+..++.|++.||.|||..   +++||||||+||+++.++.++|+|||+
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~  170 (286)
T cd06638          94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGV  170 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCc
Confidence            569999999999999987632   23789999999999999999999654   899999999999999999999999999


Q ss_pred             ccccCCCCC--Cccccc-----C----------cccc--cccccC-----------CCCc------ceec--cccCCCCC
Q 046594          209 ANYCSGGSN--RRNCEK-----T----------SEMA--EDINDF-----------VGGQ------ECLD--QRLYIPNE  250 (304)
Q Consensus       209 a~~~~~~~~--~~~~~~-----~----------~~~s--~DV~S~-----------~~~~------~~~~--~~~~~~~~  250 (304)
                      +........  ....++     +          ..++  +||||+           ....      ....  ... .+..
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~  249 (286)
T cd06638         171 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP-PPTL  249 (286)
T ss_pred             eeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC-CCcc
Confidence            876543221  111111     1          1123  899991           1100      0000  000 0011


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      ..+......+.+++.+||+     .||++|||+.++++++
T Consensus       250 ~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~ell~~~  284 (286)
T cd06638         250 HQPELWSNEFNDFIRKCLT-----KDYEKRPTVSDLLQHV  284 (286)
T ss_pred             cCCCCcCHHHHHHHHHHcc-----CCcccCCCHHHHhhcc
Confidence            1223345679999999999     9999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=9.7e-31  Score=243.55  Aligned_cols=221  Identities=18%  Similarity=0.161  Sum_probs=179.9

Q ss_pred             cccCCccccceeeecceeec-CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeec
Q 046594           66 KSFGDSVEGLTLIKGDRAVS-RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~-~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      +.||.|+||+||+..+.-.. .-.-+||+|++.......   .+.+|.. |.+++|||+++++|+|....  +.||++|+
T Consensus       702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~--~qlvtq~m  779 (1177)
T KOG1025|consen  702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST--LQLVTQLM  779 (1177)
T ss_pred             ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch--HHHHHHhc
Confidence            57899999999998774221 123589999987655443   7777777 99999999999999998874  47999999


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-Cc
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-RR  219 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~  219 (304)
                      +.|+|.++++.++.++.....+.|..||++||.|||   +++++||||-.+||||.....+||+|||+++.+..... ..
T Consensus       780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~  856 (1177)
T KOG1025|consen  780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS  856 (1177)
T ss_pred             ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence            999999999998889999999999999999999995   55899999999999999999999999999999877665 22


Q ss_pred             cc-cc------------Ccccc--cccccCCC----------Cc----------ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          220 NC-EK------------TSEMA--EDINDFVG----------GQ----------ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       220 ~~-~~------------~~~~s--~DV~S~~~----------~~----------~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .. +.            .+.++  +|||||+-          ..          +.+....   +-..|+.++..+..++
T Consensus       857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge---RLsqPpiCtiDVy~~m  933 (1177)
T KOG1025|consen  857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE---RLSQPPICTIDVYMVM  933 (1177)
T ss_pred             ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc---cCCCCCCccHHHHHHH
Confidence            22 22            44445  99999211          11          2222222   4567788999999999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                      .+||.     .|+..||+++++...+.++.+.+..
T Consensus       934 vkCwm-----id~~~rp~fkel~~~fs~~ardpqr  963 (1177)
T KOG1025|consen  934 VKCWM-----IDADSRPTFKELAEEFSRMARDPQR  963 (1177)
T ss_pred             HHHhc-----cCcccCccHHHHHHHHHHHhcCcce
Confidence            99999     9999999999999999998876653

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.97  E-value=2.4e-30  Score=222.84  Aligned_cols=217  Identities=18%  Similarity=0.198  Sum_probs=163.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|+..+.+|+|++|.||++....   +++.+|+|.+......    ..+.+|+. ++.++|||++++++.+... +.+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~l   76 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKA---DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED-KALMI   76 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcC---CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-CEEEE
Confidence            58899999999999999988763   5689999998754321    26777777 9999999999999998776 44599


Q ss_pred             EEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-CCeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-CNAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfgla~~~~  213 (304)
                      ||||+++++|.+++..... .+++..+..++.|++.||+|||+   .+++||||+|+||+++.+ +.++|+|||++....
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~  153 (256)
T cd08220          77 VMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILS  153 (256)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence            9999999999999987543 68999999999999999999965   489999999999999865 468999999998765


Q ss_pred             CCCC-Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .... ....+.          ....+  +||||              +....  ..............+...+..+.+++
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  233 (256)
T cd08220         154 SKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLI  233 (256)
T ss_pred             CCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence            4322 111111          12222  99999              11111  00011110001234445677899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||.     .||++|||+.+++++
T Consensus       234 ~~~l~-----~~p~~Rpt~~~ll~~  253 (256)
T cd08220         234 LSMLN-----LDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHcc-----CChhhCCCHHHHhhC
Confidence            99999     999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.97  E-value=4e-30  Score=223.44  Aligned_cols=213  Identities=21%  Similarity=0.205  Sum_probs=159.6

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      ...+|+|+||.||++.++   .++..+++|.........  .+.+|+. ++.++|+||+++++++..++ ..++++||++
T Consensus        13 ~~~lg~g~~g~v~~~~~~---~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~   88 (268)
T cd06624          13 RVVLGKGTYGIVYAARDL---STQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG-FFKIFMEQVP   88 (268)
T ss_pred             eEEEecCCceEEEEeEec---CCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-EEEEEEecCC
Confidence            457999999999999875   356899999987654433  6777777 99999999999999998874 4599999999


Q ss_pred             CCChhhHhhhcCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEcccccccccCCCCC-
Q 046594          142 RGSLRWNLREKGGPL--DWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l--~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      +++|.+++......+  ++..+..++.|++.||+|||+   .+++||||||+||+++. ++.++|+|||++........ 
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~  165 (268)
T cd06624          89 GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC  165 (268)
T ss_pred             CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc
Confidence            999999998764455  888999999999999999965   48999999999999986 67999999999876532211 


Q ss_pred             -Cccccc------------Ccccc--ccccc-----------CCCCcc-------eeccccCCCCCCcchHHHHHHHHHH
Q 046594          218 -RRNCEK------------TSEMA--EDIND-----------FVGGQE-------CLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       218 -~~~~~~------------~~~~s--~DV~S-----------~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                       ....+.            ...++  +||||           ..+..+       ............++......+.+++
T Consensus       166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (268)
T cd06624         166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFI  245 (268)
T ss_pred             cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHH
Confidence             000010            11122  89999           111110       0000000002334556677899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||+     .+|++|||+.++++|
T Consensus       246 ~~~l~-----~~p~~Rpt~~~ll~~  265 (268)
T cd06624         246 LRCFE-----PDPDKRASAHDLLQD  265 (268)
T ss_pred             HHHcC-----CCchhCCCHHHHHhC
Confidence            99999     999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=3.4e-30  Score=231.11  Aligned_cols=217  Identities=18%  Similarity=0.104  Sum_probs=160.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .|++.+.||+|+||.||++.++.   .++.+|+|.+......     ..+.+|.. +..++|+||+++++++.+. ..++
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~   77 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE-NNLY   77 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-CEEE
Confidence            58899999999999999998763   4689999998642211     15677777 8899999999999999887 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++.+....+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~  154 (332)
T cd05623          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME  154 (332)
T ss_pred             EEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence            99999999999999987655799999999999999999999764   899999999999999999999999999876533


Q ss_pred             CCC---Cccccc---------------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcch
Q 046594          215 GSN---RRNCEK---------------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKI  254 (304)
Q Consensus       215 ~~~---~~~~~~---------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~  254 (304)
                      ...   ....++               ...++  +||||              |....      .+..............
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  234 (332)
T cd05623         155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVT  234 (332)
T ss_pred             CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccc
Confidence            221   111122               11223  89999              11111      1111111000011123


Q ss_pred             HHHHHHHHHHHHhccccCCCCCC--CCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGN--ENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp--~~Rps~~~vl~~  289 (304)
                      ..+..+.+++.+|+.     .++  ..|+++.++++|
T Consensus       235 ~~s~~~~~li~~ll~-----~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         235 DVSEDAKDLIRRLIC-----SREHRLGQNGIEDFKQH  266 (332)
T ss_pred             cCCHHHHHHHHHHcc-----ChhhhcCCCCHHHHhCC
Confidence            456788999999886     544  447899999988

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.97  E-value=5.4e-30  Score=220.80  Aligned_cols=216  Identities=21%  Similarity=0.128  Sum_probs=164.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-------hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-------QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ||+..+.||+|++|.||++...   .++..+++|.+.....       ...+..|+. ++.++|+||+++++++.... .
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~   76 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNL---DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED-N   76 (258)
T ss_pred             CccccceeeecCCceEEEEEEc---CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC-e
Confidence            5788899999999999998765   3578999999875431       126677777 99999999999999988774 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++++||+++++|.+++.... .+++..+..++.|++.||+|||+.   +++|+||+|+||+++.++.+||+|||++...
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~  152 (258)
T cd06632          77 LYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQV  152 (258)
T ss_pred             EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceec
Confidence            599999999999999998765 689999999999999999999764   8999999999999999999999999998765


Q ss_pred             CCCCC-Cccccc----------Ccc-cc--ccccc-----------CCC---Cc--ceeccccC-CCCCCcchHHHHHHH
Q 046594          213 SGGSN-RRNCEK----------TSE-MA--EDIND-----------FVG---GQ--ECLDQRLY-IPNEKFKITSLAKLG  261 (304)
Q Consensus       213 ~~~~~-~~~~~~----------~~~-~s--~DV~S-----------~~~---~~--~~~~~~~~-~~~~~~~~~~~~~l~  261 (304)
                      ..... ....+.          ... .+  +|+||           ..+   ..  +....... .....++......+.
T Consensus       153 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (258)
T cd06632         153 VEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAK  232 (258)
T ss_pred             cccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHH
Confidence            43321 111111          111 33  99999           111   11  00000000 012334455678899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++.+||+     .+|++||++.+++.+
T Consensus       233 ~li~~~l~-----~~p~~Rp~~~~~l~~  255 (258)
T cd06632         233 DFILKCLQ-----RDPSLRPTAAELLEH  255 (258)
T ss_pred             HHHHHHhh-----cCcccCcCHHHHhcC
Confidence            99999999     999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.9e-30  Score=224.21  Aligned_cols=212  Identities=19%  Similarity=0.187  Sum_probs=164.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +|++.+.+|.|++|.||++....   +++.+|+|.+.......   .+..|+. ++.++|+|++++++++.++ ..+++|
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~~v   77 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKR---TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-SKLWII   77 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECC---CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-CeEEEE
Confidence            68899999999999999998763   57899999987654222   6667777 9999999999999998877 455999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      +||+++++|.+++...  ++++..+..++.|++.||+|||+   .+++||||+|+||+++.++.++|+|||+++......
T Consensus        78 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  152 (274)
T cd06609          78 MEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM  152 (274)
T ss_pred             EEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence            9999999999998865  68999999999999999999965   489999999999999999999999999998775432


Q ss_pred             C--Cccccc----------Ccccc--ccccc-----------CCCCc-----ce---eccccCCCCCCcchH-HHHHHHH
Q 046594          217 N--RRNCEK----------TSEMA--EDIND-----------FVGGQ-----EC---LDQRLYIPNEKFKIT-SLAKLGD  262 (304)
Q Consensus       217 ~--~~~~~~----------~~~~s--~DV~S-----------~~~~~-----~~---~~~~~~~~~~~~~~~-~~~~l~~  262 (304)
                      .  ....++          ....+  +||||           ..+..     ..   +....   ....+.. .+..+.+
T Consensus       153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  229 (274)
T cd06609         153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN---PPSLEGNKFSKPFKD  229 (274)
T ss_pred             cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC---CCCCcccccCHHHHH
Confidence            1  111111          12233  99999           11111     00   01111   1222222 5677999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||.     .||++|||+.+++++
T Consensus       230 ~l~~~l~-----~~p~~Rpt~~~il~~  251 (274)
T cd06609         230 FVSLCLN-----KDPKERPSAKELLKH  251 (274)
T ss_pred             HHHHHhh-----CChhhCcCHHHHhhC
Confidence            9999999     999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.97  E-value=7.7e-30  Score=219.72  Aligned_cols=219  Identities=21%  Similarity=0.212  Sum_probs=165.9

Q ss_pred             ccccccCCccccceeeecceeec-CCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVS-RNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~-~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ++.+.+|.|+||.||++...... ..+..+|+|.+......   ..+..|+. ++.++|+||+++++++...+.. +++|
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~-~~i~   80 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPL-MIVM   80 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCee-EEEE
Confidence            56788999999999999876431 12488999999876543   27777877 9999999999999999887544 9999


Q ss_pred             eecCCCChhhHhhhcCCC-CCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGGP-LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~-l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++++|.+++...... +++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++.......
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  157 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD  157 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence            999999999999876533 9999999999999999999955   489999999999999999999999999998765442


Q ss_pred             C-Cc--cccc----------Ccccc--ccccc------------CCCCc-----ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          217 N-RR--NCEK----------TSEMA--EDIND------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       217 ~-~~--~~~~----------~~~~s--~DV~S------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      . ..  ..++          ....+  +||||            .++..     ..............+...+..+.+++
T Consensus       158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  237 (258)
T smart00219      158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLM  237 (258)
T ss_pred             ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHH
Confidence            2 11  0011          12222  99999            11111     00000000001233444678899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      .+||.     .||++|||+.++++.|
T Consensus       238 ~~~l~-----~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      238 LQCWA-----EDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHCc-----CChhhCcCHHHHHhhC
Confidence            99999     9999999999998864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.97  E-value=3.6e-30  Score=250.80  Aligned_cols=225  Identities=16%  Similarity=0.118  Sum_probs=165.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ++|++.+.||+|+||.||++.+..   .++.||+|++......     ..+.+|+. +++++||||+++++++.+++. .
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~---tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~-l   77 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPV---CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDP-V   77 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECC---CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCE-E
Confidence            589999999999999999998763   4789999998754221     25667777 999999999999999988744 4


Q ss_pred             EEEEeecCCCChhhHhhhc----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          134 CLVFEFMQRGSLRWNLREK----------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~----------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                      +++|||++||+|.+++...          ...+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.++|
T Consensus        78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKL  154 (932)
T PRK13184         78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVI  154 (932)
T ss_pred             EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEE
Confidence            9999999999999988642          11456778899999999999999764   8999999999999999999999


Q ss_pred             cccccccccCCCCC--------------------CcccccCcc----------cc--ccccc-----------CCCCc--
Q 046594          204 AGFGAANYCSGGSN--------------------RRNCEKTSE----------MA--EDIND-----------FVGGQ--  238 (304)
Q Consensus       204 ~Dfgla~~~~~~~~--------------------~~~~~~~~~----------~s--~DV~S-----------~~~~~--  238 (304)
                      +|||+++.......                    ....++..+          .+  +||||           ..+..  
T Consensus       155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~  234 (932)
T PRK13184        155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK  234 (932)
T ss_pred             EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence            99999986621100                    001222112          22  89999           11111  


Q ss_pred             ---ceeccccCCCCCCc--chHHHHHHHHHHHHhccccCCCCCCCCCC-CHHHHHHHHHHHHhh
Q 046594          239 ---ECLDQRLYIPNEKF--KITSLAKLGDIEKWCISCCSNIEGNENHP-KIVDVLSGLKQVKQL  296 (304)
Q Consensus       239 ---~~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~~~~~~dp~~Rp-s~~~vl~~L~~~~~~  296 (304)
                         ..............  ..+.+..+.+++.+|+.     .||++|| ++.++++.|+...+.
T Consensus       235 ~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~-----~DP~kR~ss~eeLl~~Le~~lq~  293 (932)
T PRK13184        235 KGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALA-----VDPAERYSSVQELKQDLEPHLQG  293 (932)
T ss_pred             chhhhhhhhhccChhhccccccCCHHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHHhc
Confidence               11111110000011  12445778999999999     9999997 577788888887653

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=3.2e-30  Score=233.80  Aligned_cols=144  Identities=22%  Similarity=0.201  Sum_probs=125.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .|+..+.||+|+||.||++.++.   .++.+|+|+++.....     ..+++|.. +..++|+||+++++.+.+. ..++
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-~~~~   77 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKD---TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK-RNLY   77 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CEEE
Confidence            57889999999999999998863   5789999999753211     15667777 9999999999999999887 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+   .||+||||||+|||++.++.++|+|||+++..
T Consensus        78 lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          78 LIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             EEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence            9999999999999998765 79999999999999999999965   48999999999999999999999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.97  E-value=5.7e-30  Score=229.14  Aligned_cols=141  Identities=18%  Similarity=0.069  Sum_probs=119.6

Q ss_pred             cccccCCc--cccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           64 MLKSFGDS--VEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        64 ~~~~lg~g--~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +.+.||+|  +|++||++..+   .+|+.||+|.+......    ..+.+|+. ++.++||||+++++++..++. .++|
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~-~~lv   77 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYK---PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE-LWVV   77 (327)
T ss_pred             hhhhccccccceEEEEEEeec---ccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCE-EEEE
Confidence            46788999  67899998886   45799999999765322    26667777 888999999999999988754 5999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      |||+++|+|.+++.... ..+++..++.++.|++.||+|||+.   +++||||||+|||++.++.++++||+.+..
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~  150 (327)
T cd08227          78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS  150 (327)
T ss_pred             EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhc
Confidence            99999999999997643 2689999999999999999999654   899999999999999999999999986543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.97  E-value=5.5e-30  Score=222.49  Aligned_cols=214  Identities=21%  Similarity=0.211  Sum_probs=159.5

Q ss_pred             cccCCccccceeeecceeec---CCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVS---RNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~---~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.+|+|+||.||++......   ..+..+++|.+......   ..+.+|+. ++.++||||+++++++...+.. +++||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~~v~e   79 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQ-YIIME   79 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCe-EEEEe
Confidence            36899999999998875332   23367999988654322   26677777 9999999999999999877554 99999


Q ss_pred             ecCCCChhhHhhhcC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-----CeeEcccc
Q 046594          139 FMQRGSLRWNLREKG------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-----NAKLAGFG  207 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-----~~kl~Dfg  207 (304)
                      |+++++|.+++....      ..+++.++..++.|++.||+|||+   .+++|+||||+||+++.++     .++|+|||
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg  156 (269)
T cd05044          80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFG  156 (269)
T ss_pred             ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence            999999999987531      257899999999999999999965   4799999999999999877     89999999


Q ss_pred             cccccCCCCCCc----c---c--c-----cCcccc--cccccCC--------CCc---------c---eeccccCCCCCC
Q 046594          208 AANYCSGGSNRR----N---C--E-----KTSEMA--EDINDFV--------GGQ---------E---CLDQRLYIPNEK  251 (304)
Q Consensus       208 la~~~~~~~~~~----~---~--~-----~~~~~s--~DV~S~~--------~~~---------~---~~~~~~~~~~~~  251 (304)
                      +++.........    .   .  .     ..+..+  +||||++        .+.         +   .+....   ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~---~~~  233 (269)
T cd05044         157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG---RLQ  233 (269)
T ss_pred             cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC---ccC
Confidence            987654322100    0   0  0     022233  8999911        011         0   000111   123


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      .+...+..+.+++.+||.     .+|.+||++.++++.|+
T Consensus       234 ~~~~~~~~~~~li~~~l~-----~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         234 KPENCPDKIYQLMTNCWA-----QDPSERPTFDRIQEILQ  268 (269)
T ss_pred             CcccchHHHHHHHHHHcC-----CCcccCCCHHHHHHHHh
Confidence            344567889999999999     99999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.97  E-value=5.2e-30  Score=224.49  Aligned_cols=147  Identities=24%  Similarity=0.291  Sum_probs=127.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|++.+.+|+|++|.||++.+..   +|..+++|++.....    ...+.+|+. +++++||||+++++++..+. .+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~~   76 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRE---TGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS-GFVL   76 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECC---CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC-eeEE
Confidence            58899999999999999998753   478999999876542    126677777 99999999999999998874 4499


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |+||+ +++|.+++......+++.+++.++.|++.||+|||+.   +++|+||||+||+++.++.++|+|||++......
T Consensus        77 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~  152 (286)
T cd07832          77 VMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEE  152 (286)
T ss_pred             Eeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence            99999 9999999987666899999999999999999999754   8999999999999999999999999998876543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.97  E-value=8.2e-30  Score=222.70  Aligned_cols=212  Identities=20%  Similarity=0.213  Sum_probs=162.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      -|+..+.||+|+||.||++.+.   .++..+|+|.........   .+.+|+. +++++||||+++++++..++. +++|
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~lv   80 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDN---RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK-LWII   80 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEEC---CCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCe-EEEE
Confidence            3678889999999999998764   357899999987543322   6777777 999999999999999988744 4999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|.+++...  .+++..+..++.|++.|+.|||   +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06641          81 MEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  155 (277)
T ss_pred             EEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence            9999999999998754  6899999999999999999995   4589999999999999999999999999987654321


Q ss_pred             C--Cccccc----------Ccccc--cccccC-----------CCCcc--------eeccccCCCCCCcchHHHHHHHHH
Q 046594          217 N--RRNCEK----------TSEMA--EDINDF-----------VGGQE--------CLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       217 ~--~~~~~~----------~~~~s--~DV~S~-----------~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .  ....+.          ....+  +||||+           .+...        .+....   ....+...+..+.++
T Consensus       156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  232 (277)
T cd06641         156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEF  232 (277)
T ss_pred             hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC---CCCCCcccCHHHHHH
Confidence            1  001111          11222  899991           11110        001111   223344556789999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||+     .+|.+||++.++++|
T Consensus       233 i~~~l~-----~~p~~Rp~~~~~l~~  253 (277)
T cd06641         233 VEACLN-----KEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHcc-----CChhhCcCHHHHHhC
Confidence            999999     999999999999996

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.97  E-value=3.6e-30  Score=226.50  Aligned_cols=216  Identities=19%  Similarity=0.174  Sum_probs=165.0

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.||+|++|.||.+.+..   +++.+|+|.+.....     ...+..|+. +++++||||+++++++..++. ++
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~   77 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKG---SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSN-LY   77 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCe-EE
Confidence            68899999999999999998863   578999999875322     125667777 999999999999999988754 49


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++++|.+++.... .+++..+..++.|++.||+|||+   .+++||||+|+|||++.++.++|+|||++.....
T Consensus        78 ~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  153 (290)
T cd05580          78 LVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG  153 (290)
T ss_pred             EEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence            9999999999999998775 79999999999999999999976   4899999999999999999999999999987654


Q ss_pred             CCC--Ccccc--c-----Cccc--cccccc--------------CCCCc-ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          215 GSN--RRNCE--K-----TSEM--AEDIND--------------FVGGQ-ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       215 ~~~--~~~~~--~-----~~~~--s~DV~S--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                      ...  .....  .     ....  .+||||              +.... .............++......+.+++.+||
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  233 (290)
T cd05580         154 RTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLL  233 (290)
T ss_pred             CCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHc
Confidence            422  11110  0     1112  289999              11111 000001101122344555788999999999


Q ss_pred             cccCCCCCCCCCC-----CHHHHHHH
Q 046594          269 SCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      .     .||.+|+     ++.++++|
T Consensus       234 ~-----~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         234 Q-----VDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             c-----CCHHHccCcccCCHHHHHcC
Confidence            9     9999999     77887764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.5e-30  Score=237.07  Aligned_cols=146  Identities=27%  Similarity=0.261  Sum_probs=123.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|++.+.||+|+||.||++...+. ..+..|++|.+....   ....|+. +++++||||+++++++.... .++++|
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~-~~~~~v~vK~~~~~~---~~~~E~~il~~l~h~~iv~~~~~~~~~~-~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGD-EQRKKVIVKAVTGGK---TPGREIDILKTISHRAIINLIHAYRWKS-TVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCC-ccceeEEEEeccccc---cHHHHHHHHHhcCCCCccceeeeEeeCC-EEEEEe
Confidence            45899999999999999999876543 245789999886532   3345666 99999999999999988774 459999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |++. ++|.+++.... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.++|+|||++.....
T Consensus       166 e~~~-~~l~~~l~~~~-~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~  237 (392)
T PHA03207        166 PKYK-CDLFTYVDRSG-PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDA  237 (392)
T ss_pred             hhcC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence            9996 58988885544 799999999999999999999654   899999999999999999999999999976544

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.97  E-value=5.4e-30  Score=224.39  Aligned_cols=147  Identities=22%  Similarity=0.225  Sum_probs=125.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|+..+.+|+|++|.||++.++   .+++.+|+|++......    ..+.+|+. ++.++|+|++++++++.... .+++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~   77 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNR---ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-KLHL   77 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEEC---CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-EEEE
Confidence            6899999999999999998875   35789999998644321    25667777 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++++|..++.... .+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++......
T Consensus        78 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07847          78 VFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGP  153 (286)
T ss_pred             EEeccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence            999999988887776544 79999999999999999999966   48999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=4.1e-30  Score=240.85  Aligned_cols=147  Identities=19%  Similarity=0.250  Sum_probs=117.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCC------CCCcccceeeeeeCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSS------SHLNIVTLLGYPQDGL  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l------~h~niv~~~~~~~~~~  130 (304)
                      ..+|++.+.||+|+||.||++.+..   .++.||||+++...... ....|+. ++.+      .|.+++++++++....
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~---~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~  204 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRK---RKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET  204 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcC---CCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence            4689999999999999999998763   46899999996532221 2233333 4333      4566899999988776


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-----------
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-----------  199 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-----------  199 (304)
                      .++++|||++ +++|.+++...+ .+++..+..++.|++.||+|||..  .||+||||||+|||++.++           
T Consensus       205 ~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~  280 (467)
T PTZ00284        205 GHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRAL  280 (467)
T ss_pred             ceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccccccccccc
Confidence            7779999998 668999887765 799999999999999999999742  3899999999999998765           


Q ss_pred             -----CeeEccccccccc
Q 046594          200 -----NAKLAGFGAANYC  212 (304)
Q Consensus       200 -----~~kl~Dfgla~~~  212 (304)
                           .+||+|||++...
T Consensus       281 ~~~~~~vkl~DfG~~~~~  298 (467)
T PTZ00284        281 PPDPCRVRICDLGGCCDE  298 (467)
T ss_pred             CCCCceEEECCCCccccC
Confidence                 4999999987654

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.97  E-value=2.2e-30  Score=224.39  Aligned_cols=218  Identities=19%  Similarity=0.231  Sum_probs=165.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .|+..+.||+|++|.||++.++   .+++.+++|.+.......   .+.+|+. ++.++||||+++++.+... +.++++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv   77 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHR---PTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-GDISIC   77 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEc---CCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC-CEEEEE
Confidence            5778899999999999999876   357899999987654332   6667777 8999999999999999888 455999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      +||+++++|.+++......+++.....++.|++.||+|||..  .+++|+||||+||+++.++.++|+|||.+.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~  155 (265)
T cd06605          78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL  155 (265)
T ss_pred             EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence            999999999999987645899999999999999999999641  589999999999999999999999999987653322


Q ss_pred             CCccccc----------Ccccc--ccccc--------------CCCC----c---ceeccccCCCCCCcchH-HHHHHHH
Q 046594          217 NRRNCEK----------TSEMA--EDIND--------------FVGG----Q---ECLDQRLYIPNEKFKIT-SLAKLGD  262 (304)
Q Consensus       217 ~~~~~~~----------~~~~s--~DV~S--------------~~~~----~---~~~~~~~~~~~~~~~~~-~~~~l~~  262 (304)
                      .....+.          ....+  +||||              +...    .   +.+...........+.. .+..+.+
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (265)
T cd06605         156 AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQD  235 (265)
T ss_pred             hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence            1111111          11222  89999              1111    0   11111111111223333 5677999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||.     .||++|||+.+++++
T Consensus       236 li~~~l~-----~~p~~Rpt~~~ll~~  257 (265)
T cd06605         236 FVNLCLI-----KDPRERPSYKELLEH  257 (265)
T ss_pred             HHHHHcC-----CCchhCcCHHHHhhC
Confidence            9999999     999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=2.2e-29  Score=219.04  Aligned_cols=215  Identities=16%  Similarity=0.181  Sum_probs=152.4

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +.||+|+||.||++..... .....+++|........   ..+.++.. ++.++||||+++++.+...... ++||||++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~-~lv~e~~~   78 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTD-TGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPY-LLVFEYCE   78 (268)
T ss_pred             CcCCCCcCceEEEEEEEcC-CCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCcc-EEEEecCC
Confidence            3689999999999865322 23456778877654322   26666666 9999999999999999887544 99999999


Q ss_pred             CCChhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC--
Q 046594          142 RGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS--  216 (304)
Q Consensus       142 ~gsL~~~l~~~~---~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--  216 (304)
                      +|+|.+++....   ...++.....++.|++.||+|||+.   +++||||||+|||++.++.++|+|||++.......  
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~  155 (268)
T cd05086          79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI  155 (268)
T ss_pred             CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence            999999997642   2467778889999999999999754   79999999999999999999999999876421110  


Q ss_pred             ----C-Ccccc--cC------------cccc--cccccC------------CCCc-----ceec-----cccCCCCCCcc
Q 046594          217 ----N-RRNCE--KT------------SEMA--EDINDF------------VGGQ-----ECLD-----QRLYIPNEKFK  253 (304)
Q Consensus       217 ----~-~~~~~--~~------------~~~s--~DV~S~------------~~~~-----~~~~-----~~~~~~~~~~~  253 (304)
                          . .....  .+            ...+  +||||+            .+..     +...     ..........+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (268)
T cd05086         156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE  235 (268)
T ss_pred             hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence                0 00000  01            0112  899991            0111     1001     01101122233


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      ......+.+++..||.      +|++||++.++++.|.
T Consensus       236 ~~~~~~~~~l~~~c~~------~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         236 LPYSERWYEVLQFCWL------SPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCcHHHHHHHHHHhh------CcccCCCHHHHHHHhc
Confidence            3456778899999998      6999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=7e-30  Score=222.28  Aligned_cols=216  Identities=19%  Similarity=0.206  Sum_probs=161.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch------------hHHHHHHH-hhCCCCCcccceeeeee
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ------------TKLEEEIL-LKSSSHLNIVTLLGYPQ  127 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~------------~~~~~e~~-l~~l~h~niv~~~~~~~  127 (304)
                      +|.+.+.||.|+||.||++...   .+++.+|+|.++.....            +.+..|+. ++.++|+|++++++++.
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   78 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNV---TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET   78 (272)
T ss_pred             ceeecceecccCceEEEEEeec---CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec
Confidence            6888999999999999998865   35789999987642111            14566777 99999999999999988


Q ss_pred             CCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       128 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                      ..+ ..++||||+++++|.+++...+ .+++..+..++.|++.||.|||+   .+++||||+|+||+++.++.++|+|||
T Consensus        79 ~~~-~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~  153 (272)
T cd06629          79 TEE-YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFG  153 (272)
T ss_pred             cCC-ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecc
Confidence            774 4499999999999999998875 79999999999999999999965   489999999999999999999999999


Q ss_pred             cccccCCCCC----Cccccc------------Ccccc--ccccc--------------CCCCc------ceecccc-CCC
Q 046594          208 AANYCSGGSN----RRNCEK------------TSEMA--EDIND--------------FVGGQ------ECLDQRL-YIP  248 (304)
Q Consensus       208 la~~~~~~~~----~~~~~~------------~~~~s--~DV~S--------------~~~~~------~~~~~~~-~~~  248 (304)
                      ++........    ....++            ...++  +||||              +...+      +...... ...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  233 (272)
T cd06629         154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPI  233 (272)
T ss_pred             ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcC
Confidence            9876532211    000011            11123  89999              11111      0000111 000


Q ss_pred             CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          249 NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       249 ~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ........+..+.+++.+||.     .+|++|||+.++++|
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~~il~~  269 (272)
T cd06629         234 PPDVSMNLSPVALDFLNACFT-----INPDNRPTARELLQH  269 (272)
T ss_pred             CccccccCCHHHHHHHHHHhc-----CChhhCCCHHHHhhC
Confidence            112223446789999999999     999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=3.3e-30  Score=234.29  Aligned_cols=217  Identities=23%  Similarity=0.228  Sum_probs=173.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ...|.+.+.||+|.|+.|.++.+.-   .+..||+|.++......    .+..|+. |+.++|||||+++.+.... ..+
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~---t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~-~~l  130 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHIL---TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE-ATL  130 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecC---CCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec-cee
Confidence            3468999999999999999999874   47899999998765443    4455666 9999999999999999888 445


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+.+|.+++++.+++ .+.+..+..++.|+.+|++||   |+++|+|||||++|+|++.+.++||+|||++.++.
T Consensus       131 ylV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYc---H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  131 YLVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYC---HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD  206 (596)
T ss_pred             EEEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHH---hhcceeccccchhhcccccccceeeeccccceeec
Confidence            99999999999999999988 677799999999999999999   55589999999999999999999999999999987


Q ss_pred             CCCC-Cccccc----------Ccccc---ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA---EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s---~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .... .+.++.          +..+.   .|+||              |.+..  +.-++.+ ..+-.+|.-.+.++.++
T Consensus       207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl-~gk~rIp~~ms~dce~l  285 (596)
T KOG0586|consen  207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVL-RGKYRIPFYMSCDCEDL  285 (596)
T ss_pred             ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhe-eeeecccceeechhHHH
Confidence            6655 445555          11222   89999              32211  2222222 11123344456778899


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++++.     .+|.+|++++++.++
T Consensus       286 Lrk~lv-----l~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  286 LRKFLV-----LNPSKRGPCDQIMKD  306 (596)
T ss_pred             HHHhhc-----cCccccCCHHHhhhh
Confidence            999999     999999999999875

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.97  E-value=5.1e-30  Score=224.39  Aligned_cols=218  Identities=19%  Similarity=0.170  Sum_probs=161.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCC-CCCcccceeeeeeCC-----C
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSS-SHLNIVTLLGYPQDG-----L  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l-~h~niv~~~~~~~~~-----~  130 (304)
                      .++|++.+.+|.|+||.||++.+.   .+++.+|+|......... .+..+.. ++++ +|+||+++++++...     .
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   91 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHV---KTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD   91 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEc---CCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence            468999999999999999999876   357899999987654332 5666666 7777 799999999998632     3


Q ss_pred             CceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ..++++|||+++|+|.+++..... .+++..++.++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||++
T Consensus        92 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~  168 (282)
T cd06636          92 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVS  168 (282)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcch
Confidence            456999999999999999876432 688999999999999999999654   8999999999999999999999999998


Q ss_pred             cccCCCCC--Cccccc---------------Ccccc--ccccc-----------CCCCcc------ee--ccccCCCCCC
Q 046594          210 NYCSGGSN--RRNCEK---------------TSEMA--EDIND-----------FVGGQE------CL--DQRLYIPNEK  251 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~---------------~~~~s--~DV~S-----------~~~~~~------~~--~~~~~~~~~~  251 (304)
                      ........  ....+.               ...++  +||||           ..+...      ..  ....  ....
T Consensus       169 ~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~  246 (282)
T cd06636         169 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--PPKL  246 (282)
T ss_pred             hhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCC--CCCC
Confidence            75532211  100010               11122  89999           111110      00  0000  0111


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .....+..+.+++.+||+     .||.+|||+.+++++
T Consensus       247 ~~~~~~~~~~~li~~cl~-----~~p~~Rp~~~ell~~  279 (282)
T cd06636         247 KSKKWSKKFIDFIEGCLV-----KNYLSRPSTEQLLKH  279 (282)
T ss_pred             cccccCHHHHHHHHHHhC-----CChhhCcCHHHHhcC
Confidence            123456789999999999     999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.97  E-value=6.7e-30  Score=221.55  Aligned_cols=212  Identities=23%  Similarity=0.212  Sum_probs=162.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--------hHHHHHHH-hhCCCCCcccceeeeeeCCCC
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--------TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~e~~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      +|++.+.+|.|+||.||++..    .+++.+|+|.+......        ..+.+|+. ++.++|+||+++++++.+. .
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~   75 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT----NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD-N   75 (265)
T ss_pred             CccccceEeccCCeEEEEEEE----cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-C
Confidence            478889999999999998864    35789999988754211        15777888 9999999999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+++++||+++++|.+++.+.. ++++..+..++.|++.||+|||+.   +++|+||+|+||+++.++.++|+|||++..
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  151 (265)
T cd06631          76 TISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARR  151 (265)
T ss_pred             eEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHh
Confidence            5599999999999999998765 789999999999999999999754   799999999999999999999999999876


Q ss_pred             cCCCCC--------Cccccc----------Ccccc--ccccc--------------CCCCcce------ecc-ccCCCCC
Q 046594          212 CSGGSN--------RRNCEK----------TSEMA--EDIND--------------FVGGQEC------LDQ-RLYIPNE  250 (304)
Q Consensus       212 ~~~~~~--------~~~~~~----------~~~~s--~DV~S--------------~~~~~~~------~~~-~~~~~~~  250 (304)
                      ......        ....++          ....+  +||||              |...+..      ... ..   ..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~  228 (265)
T cd06631         152 LAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL---MP  228 (265)
T ss_pred             hhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC---CC
Confidence            432110        000111          11122  99999              1111100      000 01   12


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+...+..+.+++.+||+     .+|++||++.+++++
T Consensus       229 ~~~~~~~~~~~~~i~~~l~-----~~p~~Rp~~~~~l~~  262 (265)
T cd06631         229 RLPDSFSAAAIDFVTSCLT-----RDQHERPSALQLLRH  262 (265)
T ss_pred             CCCCCCCHHHHHHHHHHhc-----CCcccCCCHHHHhcC
Confidence            3445567889999999999     999999999999864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=7.3e-30  Score=225.16  Aligned_cols=216  Identities=19%  Similarity=0.181  Sum_probs=162.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-------hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-------TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ||++.+.||+|++|.||++.++.   +++.+++|.+......       ..+..|+. +++++|+||+++++++.+. +.
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~   76 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKE---TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK-SN   76 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECC---CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC-CE
Confidence            58888999999999999998763   4789999999765433       14556677 9999999999999999886 55


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+ +|+|.+++......+++..++.++.|+++||+|||..   +++||||||+||+++.++.++|+|||++...
T Consensus        77 ~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~  152 (298)
T cd07841          77 INLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSF  152 (298)
T ss_pred             EEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence            59999999 8899999977654799999999999999999999654   8999999999999999999999999999876


Q ss_pred             CCCCC--Cccccc-----------Ccccc--cccccC-----------C---CCcc------ee----------------
Q 046594          213 SGGSN--RRNCEK-----------TSEMA--EDINDF-----------V---GGQE------CL----------------  241 (304)
Q Consensus       213 ~~~~~--~~~~~~-----------~~~~s--~DV~S~-----------~---~~~~------~~----------------  241 (304)
                      .....  ....+.           ....+  +||||+           +   ....      +.                
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (298)
T cd07841         153 GSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTS  232 (298)
T ss_pred             cCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccc
Confidence            54322  111111           11223  999991           1   0000      00                


Q ss_pred             --ccccC-----CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 --DQRLY-----IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 --~~~~~-----~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                        +....     .+........+..+.+++.+||+     .||++|||+.+++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-----~~P~~R~s~~e~l~~  282 (298)
T cd07841         233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLT-----LNPNKRITARQALEH  282 (298)
T ss_pred             ccccccccccCCcchhhhcccccHHHHHHHHHHhc-----CCcccCcCHHHHhhC
Confidence              00000     00000112335778899999999     999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.97  E-value=8e-30  Score=221.38  Aligned_cols=216  Identities=22%  Similarity=0.195  Sum_probs=160.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----h--hHHHHHHH-hhCCCCCcccceeeeeeCC-CC
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----Q--TKLEEEIL-LKSSSHLNIVTLLGYPQDG-LQ  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~--~~~~~e~~-l~~l~h~niv~~~~~~~~~-~~  131 (304)
                      .|+..+.+|+|+||.||++....   .+..+++|.+.....     .  ..+.+|+. ++.++||||+++++++... +.
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   79 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVD---TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEK   79 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcC---CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCC
Confidence            57889999999999999998753   468999998864321     1  15677777 9999999999999988754 34


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+++++||+++++|.+++.... .+++...+.++.|++.||+|||.   .+++||||||+||+++.++.++|+|||++..
T Consensus        80 ~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          80 TLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            5689999999999999998765 68999999999999999999965   4899999999999999999999999999876


Q ss_pred             cCCCCC-----Cccccc----------Ccccc--ccccc-----------CCCCc------ceeccccCCCCCCcchHHH
Q 046594          212 CSGGSN-----RRNCEK----------TSEMA--EDIND-----------FVGGQ------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       212 ~~~~~~-----~~~~~~----------~~~~s--~DV~S-----------~~~~~------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ......     ....++          ....+  +||||           ..+..      .+...........++....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHIS  235 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcC
Confidence            532111     001111          12222  89999           11111      1111111001233445556


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+++ +||.     .+|++||+++|+++|
T Consensus       236 ~~~~~li-~~~~-----~~p~~Rp~~~eil~h  261 (266)
T cd06651         236 EHARDFL-GCIF-----VEARHRPSAEELLRH  261 (266)
T ss_pred             HHHHHHH-HHhc-----CChhhCcCHHHHhcC
Confidence            6777777 7999     999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=7e-30  Score=222.38  Aligned_cols=147  Identities=22%  Similarity=0.228  Sum_probs=130.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ++.|++++.||.|.-|+||+++.+++   +..+|+|++.......     +.+.|.. |+.++||.+..+|+.+..+...
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t---~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~  152 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGT---NCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS  152 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCC---CceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence            57899999999999999999999865   4899999998765443     4445555 9999999999999999998555


Q ss_pred             eEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                       |++||||+||+|..+.+++.+ .+++..+..|+.+++-||+|||..   |||.|||||+||||-++|++.|+||.|+..
T Consensus       153 -cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~  228 (459)
T KOG0610|consen  153 -CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLR  228 (459)
T ss_pred             -EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccccc
Confidence             999999999999999888765 899999999999999999999776   999999999999999999999999998754


Q ss_pred             c
Q 046594          212 C  212 (304)
Q Consensus       212 ~  212 (304)
                      .
T Consensus       229 ~  229 (459)
T KOG0610|consen  229 C  229 (459)
T ss_pred             C
Confidence            3

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.97  E-value=1.1e-29  Score=220.47  Aligned_cols=216  Identities=18%  Similarity=0.207  Sum_probs=163.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--------hhHHHHHHH-hhCCCCCcccceeeeeeCCCC
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--------QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      +|+..+.+|+|++|.||.+...   .+++.+|+|.+.....        ...+..|+. +++++|+||+++++++.+.+ 
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-   76 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDV---KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS-   76 (268)
T ss_pred             CccccceecCcCceEEEEEEEc---CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC-
Confidence            4788899999999999998764   4578999999875331        126677777 99999999999999998875 


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAAN  210 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~  210 (304)
                      .+++|+||+++++|.+++.... ++++..+..++.|++.||+|||+.   +++|+||+|+||+++.++ .++|+|||++.
T Consensus        77 ~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~  152 (268)
T cd06630          77 HFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAA  152 (268)
T ss_pred             eEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence            4499999999999999998765 789999999999999999999654   899999999999998776 59999999987


Q ss_pred             ccCCCCC-C-----ccccc----------Ccccc--ccccc--------------CCCCc-----ceeccc-cCCCCCCc
Q 046594          211 YCSGGSN-R-----RNCEK----------TSEMA--EDIND--------------FVGGQ-----ECLDQR-LYIPNEKF  252 (304)
Q Consensus       211 ~~~~~~~-~-----~~~~~----------~~~~s--~DV~S--------------~~~~~-----~~~~~~-~~~~~~~~  252 (304)
                      ....... .     ...++          ....+  +||||              +....     ...... ........
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  232 (268)
T cd06630         153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSI  232 (268)
T ss_pred             ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCC
Confidence            7653321 0     00111          11222  89999              11111     000000 00012345


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +......+.+++.+||.     .+|++|||+.+++++
T Consensus       233 ~~~~~~~~~~~i~~~l~-----~~p~~R~~~~~ll~~  264 (268)
T cd06630         233 PEHLSPGLRDVTLRCLE-----LQPEDRPPSRELLKH  264 (268)
T ss_pred             chhhCHHHHHHHHHHcC-----CCcccCcCHHHHhcC
Confidence            55667889999999999     999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=1.4e-29  Score=225.49  Aligned_cols=145  Identities=17%  Similarity=0.147  Sum_probs=117.8

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCC-CCceEEEEeecCC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRRCLVFEFMQR  142 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~~lv~e~~~~  142 (304)
                      .++||+|+||.||++..+.. .+++.+|+|.+..........+|+. +++++||||+++++++... +..+++++||+++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDG-KDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             ccccccCCCeEEEEEEEccC-CCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            46899999999999986533 3468999999976554445566777 9999999999999988653 3456899999965


Q ss_pred             CChhhHhhhcC--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee----CCCCCeeEccccccc
Q 046594          143 GSLRWNLREKG--------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL----DELCNAKLAGFGAAN  210 (304)
Q Consensus       143 gsL~~~l~~~~--------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill----~~~~~~kl~Dfgla~  210 (304)
                       +|.+++....        ..+++..+..++.|++.||+|||+   .+|+||||||+|||+    +.++.+||+|||+++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence             8888775321        158999999999999999999965   489999999999999    456789999999998


Q ss_pred             ccCC
Q 046594          211 YCSG  214 (304)
Q Consensus       211 ~~~~  214 (304)
                      ....
T Consensus       161 ~~~~  164 (317)
T cd07868         161 LFNS  164 (317)
T ss_pred             ccCC
Confidence            7643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.97  E-value=8.3e-30  Score=224.37  Aligned_cols=150  Identities=20%  Similarity=0.228  Sum_probs=127.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCC-Cc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGL-QR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~  132 (304)
                      ...|++.+.||+|+||.||++.++   .+++.+++|.++......    .+.+|+. +++++||||+++++++...+ ..
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   80 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDK---KTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDK   80 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEEC---CCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCc
Confidence            357999999999999999999876   347899999997543322    3456666 99999999999999987652 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++|+||+++ +|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++...
T Consensus        81 ~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~  156 (293)
T cd07843          81 IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREY  156 (293)
T ss_pred             EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence            5999999975 99999887665799999999999999999999754   8999999999999999999999999998876


Q ss_pred             CCC
Q 046594          213 SGG  215 (304)
Q Consensus       213 ~~~  215 (304)
                      ...
T Consensus       157 ~~~  159 (293)
T cd07843         157 GSP  159 (293)
T ss_pred             cCC
Confidence            543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.97  E-value=2e-29  Score=223.61  Aligned_cols=214  Identities=21%  Similarity=0.173  Sum_probs=162.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ++|+..+.+|+|+||.||++...   .+++.||+|.+......     ..+..|+. ++.++|||++++++++...+.. 
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~-   90 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDV---RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTA-   90 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEc---CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeE-
Confidence            57899999999999999998875   35789999998643321     15667777 9999999999999999987555 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++|+||++ |+|.+.+......+++..+..++.|++.||.|||..   +++||||+|+||+++.++.++|+|||++....
T Consensus        91 ~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          91 WLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             EEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            99999997 488887776555799999999999999999999654   89999999999999999999999999987654


Q ss_pred             CCCC-Cccccc----------Ccccc--cccccCC-----------CCcc---------eeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDINDFV-----------GGQE---------CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S~~-----------~~~~---------~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... .....+          .+.++  +||||++           +...         +.....   ....+...+..+
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  243 (307)
T cd06607         167 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS---PTLSSNDWSDYF  243 (307)
T ss_pred             CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC---CCCCchhhCHHH
Confidence            3322 111110          12223  9999911           1110         000000   111123456789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+++.+||.     .||++||++.+++.+
T Consensus       244 ~~li~~~l~-----~~p~~Rp~~~~il~~  267 (307)
T cd06607         244 RNFVDSCLQ-----KIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHHHHhc-----CChhhCcCHHHHhcC
Confidence            999999999     999999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.97  E-value=1e-29  Score=222.39  Aligned_cols=217  Identities=17%  Similarity=0.193  Sum_probs=157.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---h-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---T-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .|++.+.+|+|+||.||++.++   .+|+.||+|.++.....   . .+.+... ++..+||||+++++++..++. +++
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~-~~l   77 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHV---PTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGD-VWI   77 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEc---CCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCc-EEE
Confidence            5788999999999999999876   35799999998764322   1 3344444 777899999999999987755 499


Q ss_pred             EEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|||++ |+|.+++...   ...+++..++.++.|++.||+|||+.  .+++||||||+||+++.++.+||+|||++...
T Consensus        78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~  154 (283)
T cd06617          78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYL  154 (283)
T ss_pred             Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            999997 5888877642   23789999999999999999999642  27999999999999999999999999998865


Q ss_pred             CCCCC-Cccccc-----C---------cccc--ccccc--------------CCCCc---ceeccccCCCCCCcc-hHHH
Q 046594          213 SGGSN-RRNCEK-----T---------SEMA--EDIND--------------FVGGQ---ECLDQRLYIPNEKFK-ITSL  257 (304)
Q Consensus       213 ~~~~~-~~~~~~-----~---------~~~s--~DV~S--------------~~~~~---~~~~~~~~~~~~~~~-~~~~  257 (304)
                      ..... ....++     +         ..++  +|+||              +....   +.............+ ...+
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd06617         155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFS  234 (283)
T ss_pred             ccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccC
Confidence            43221 100011     1         1122  89999              11111   000000100011222 2346


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+++.+||.     .+|++||++.+++++
T Consensus       235 ~~l~~li~~~l~-----~~p~~Rp~~~~il~~  261 (283)
T cd06617         235 PEFQDFVNKCLK-----KNYKERPNYPELLQH  261 (283)
T ss_pred             HHHHHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            789999999999     999999999999973

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-30  Score=202.84  Aligned_cols=149  Identities=26%  Similarity=0.318  Sum_probs=131.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHHhhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEILLKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|...++||+|.||+||+++.+.   .++.||+|..+.+...+     .++|...++.++|.|||++++....+ ..+-
T Consensus         2 ~~ydkmekigegtygtvfkarn~~---t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd-kklt   77 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-KKLT   77 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCC---ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC-ceeE
Confidence            367888999999999999999874   46899999998766554     66666669999999999999998777 5569


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +|+|||.. +|..+....++.++.+.+..++.|+++||.|+|.+   +++|||+||.|.|++.+|+.|++|||+++.++-
T Consensus        78 lvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgi  153 (292)
T KOG0662|consen   78 LVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGI  153 (292)
T ss_pred             EeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence            99999966 99999988888999999999999999999999775   699999999999999999999999999998765


Q ss_pred             CC
Q 046594          215 GS  216 (304)
Q Consensus       215 ~~  216 (304)
                      ..
T Consensus       154 pv  155 (292)
T KOG0662|consen  154 PV  155 (292)
T ss_pred             ce
Confidence            54

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.97  E-value=4.7e-30  Score=221.66  Aligned_cols=215  Identities=19%  Similarity=0.160  Sum_probs=164.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|++.+.+|.|+||.||++.+.   .++..+|+|.+.....     ...+.+|+. +++++||||+++++++..+. .++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~   76 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKR---DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE-NMY   76 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEc---cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC-eEE
Confidence            4889999999999999999875   3478999999975431     126777777 99999999999999998774 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +|+||+++++|.+++.... ++++..+..++.|+++||.|||+.   +++|+||+|+||+++.++.++|+|||++.....
T Consensus        77 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~  152 (258)
T cd05578          77 LVVDLLLGGDLRYHLSQKV-KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTP  152 (258)
T ss_pred             EEEeCCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence            9999999999999998764 799999999999999999999754   899999999999999999999999999877654


Q ss_pred             CCC-Cccccc----------Ccccc--cccccCC--------------CCc----ceeccccCCCCCCcchHHHHHHHHH
Q 046594          215 GSN-RRNCEK----------TSEMA--EDINDFV--------------GGQ----ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       215 ~~~-~~~~~~----------~~~~s--~DV~S~~--------------~~~----~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ... ....+.          ....+  +|+||++              ...    ..+...........+...+..+.++
T Consensus       153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (258)
T cd05578         153 DTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDA  232 (258)
T ss_pred             CccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHH
Confidence            322 111111          11122  9999911              100    0000111001344555667889999


Q ss_pred             HHHhccccCCCCCCCCCCCH--HHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKI--VDVLS  288 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~--~~vl~  288 (304)
                      +.+||+     .||.+||++  .|+++
T Consensus       233 i~~~l~-----~~p~~R~~~~~~~l~~  254 (258)
T cd05578         233 INKLLE-----RDPQKRLGDNLKDLKN  254 (258)
T ss_pred             HHHHcc-----CChhHcCCccHHHHhc
Confidence            999999     999999999  66654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.97  E-value=1.3e-29  Score=222.84  Aligned_cols=146  Identities=24%  Similarity=0.280  Sum_probs=125.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|++|.||++..+   .+++.+|+|.+......   ..+.+|+. +++++|+||+++++++...+ ..+
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~   79 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSK---LTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK-TLT   79 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEc---CCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC-eEE
Confidence            467999999999999999999875   35789999998754322   24556777 99999999999999998774 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +||||+++ +|.+++......+++..+..++.|++.||.|||+.   +++||||||+||+++.++.++|+|||+++..
T Consensus        80 lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844          80 LVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccccccc
Confidence            99999985 99999887665789999999999999999999654   8999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2e-29  Score=219.12  Aligned_cols=220  Identities=19%  Similarity=0.166  Sum_probs=164.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCC-CCCcccceeeeeeCCC-----
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSS-SHLNIVTLLGYPQDGL-----  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l-~h~niv~~~~~~~~~~-----  130 (304)
                      ..+|++.+.+|+|++|.||++.++.   +++.+++|.+...... ..+.+|+. ++++ +|+||+++++++....     
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKK---TGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECC---CCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            3689999999999999999998763   4689999998865543 37777877 8888 7999999999987543     


Q ss_pred             CceEEEEeecCCCChhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                      ..++++|||+++++|.+++....   ..+++..+..++.|++.||+|||+   .+++|+||+|+||+++.++.++|+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCc
Confidence            34699999999999999887532   479999999999999999999965   489999999999999999999999999


Q ss_pred             cccccCCCCC--Cccccc---------------Ccccc--cccccCC-----------CCcc-----eeccccC--CCCC
Q 046594          208 AANYCSGGSN--RRNCEK---------------TSEMA--EDINDFV-----------GGQE-----CLDQRLY--IPNE  250 (304)
Q Consensus       208 la~~~~~~~~--~~~~~~---------------~~~~s--~DV~S~~-----------~~~~-----~~~~~~~--~~~~  250 (304)
                      ++........  ....++               ...++  +||||++           +...     .......  .+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  238 (275)
T cd06608         159 VSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTL  238 (275)
T ss_pred             cceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCC
Confidence            9876533221  111111               11122  8999911           1110     0000000  0011


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+...+..+.+++.+||.     .||++|||+.+++++
T Consensus       239 ~~~~~~~~~~~~li~~~l~-----~dp~~Rpt~~~ll~~  272 (275)
T cd06608         239 KSPENWSKKFNDFISECLI-----KNYEQRPFMEELLEH  272 (275)
T ss_pred             CchhhcCHHHHHHHHHHhh-----cChhhCcCHHHHhcC
Confidence            1223356789999999999     999999999999874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=3.5e-29  Score=219.89  Aligned_cols=218  Identities=19%  Similarity=0.177  Sum_probs=161.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCC-CCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~~l  135 (304)
                      +|+..+.+|.|++|.||++.+..   .++.+|+|.+......   ..+.+|+. ++.++||||+++++++... ...+++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   78 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKN---TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI   78 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECC---CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence            57889999999999999999863   4689999998754332   26677777 9999999999999998654 345699


Q ss_pred             EEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ||||+++++|.+++..   ....+++..+..++.|++.||+|||+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~  155 (287)
T cd06621          79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL  155 (287)
T ss_pred             EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence            9999999999987653   233689999999999999999999654   8999999999999999999999999998765


Q ss_pred             CCCCC---Ccccc-------cCcccc--ccccc--------------CCCCc-------ceec----cccCCCCCCcc--
Q 046594          213 SGGSN---RRNCE-------KTSEMA--EDIND--------------FVGGQ-------ECLD----QRLYIPNEKFK--  253 (304)
Q Consensus       213 ~~~~~---~~~~~-------~~~~~s--~DV~S--------------~~~~~-------~~~~----~~~~~~~~~~~--  253 (304)
                      .....   .....       ....++  +||||              +....       +...    ..........+  
T Consensus       156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd06621         156 VNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG  235 (287)
T ss_pred             cccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCC
Confidence            43221   00000       022233  99999              11110       0000    00000001111  


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ...+..+.+++.+||+     .||++|||+.|++++
T Consensus       236 ~~~~~~~~~li~~~l~-----~~p~~Rpt~~eil~~  266 (287)
T cd06621         236 IKWSEEFKDFIKQCLE-----KDPTRRPTPWDMLEH  266 (287)
T ss_pred             CchHHHHHHHHHHHcC-----CCcccCCCHHHHHhC
Confidence            2235678999999999     999999999999974

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=4.1e-30  Score=213.18  Aligned_cols=213  Identities=21%  Similarity=0.244  Sum_probs=162.5

Q ss_pred             ccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH--hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL--LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~--l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      +.+..+|.|..|.|++++++.   .|..+|||.+......+   ++.....  +..-.+|.||+++|+|..+... ++.|
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs---~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV-~IcM  170 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRS---TGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV-FICM  170 (391)
T ss_pred             hhHHhhcCCCccceEEEEEcc---cceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH-HHHH
Confidence            346789999999999999984   47999999998776555   2222222  3344589999999999988555 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      |.|.. -++.++++..+++++..+-++...+..||.||.+.|  +|+|||+||+|||+|+.|++||||||++..+.++..
T Consensus       171 elMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA  247 (391)
T KOG0983|consen  171 ELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA  247 (391)
T ss_pred             HHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccc
Confidence            99954 788888887779999999999999999999999988  799999999999999999999999999988766544


Q ss_pred             -Cccccc-------------Ccccc--ccccc--------------CCCCc-------ceeccccCCCCCCcchHHHHHH
Q 046594          218 -RRNCEK-------------TSEMA--EDIND--------------FVGGQ-------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       218 -~~~~~~-------------~~~~s--~DV~S--------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                       ....|-             ...|.  +||||              ++.-.       .+.+ ... |.-......++.+
T Consensus       248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~eP-P~L~~~~gFSp~F  325 (391)
T KOG0983|consen  248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEP-PLLPGHMGFSPDF  325 (391)
T ss_pred             cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCC-CCCCcccCcCHHH
Confidence             111111             11222  99999              22211       2222 110 1111223367899


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++++..||.     +|+.+||...++++|
T Consensus       326 ~~fv~~CL~-----kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  326 QSFVKDCLT-----KDHRKRPKYNKLLEH  349 (391)
T ss_pred             HHHHHHHhh-----cCcccCcchHHHhcC
Confidence            999999999     999999999999875

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.96  E-value=1.6e-29  Score=217.86  Aligned_cols=213  Identities=19%  Similarity=0.238  Sum_probs=162.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEecccc----chhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA----SQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|+..+.+|+|+||.||++..+   .+|..+|+|.+....    ....+.+|+. ++.++|+||+++++.+... ...++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~-~~~~l   76 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAK---SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN-GRLFI   76 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEc---CCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-CeEEE
Confidence            5888999999999999998876   357889999987542    2226667777 9999999999999998877 45599


Q ss_pred             EEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~~~~  213 (304)
                      ++||+++++|.+++..... .+++..+..++.|++.||+|||+.   +++|+||||+||+++.++ .++|+|||.+....
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~  153 (257)
T cd08225          77 VMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN  153 (257)
T ss_pred             EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence            9999999999999876543 689999999999999999999754   799999999999999886 46999999987664


Q ss_pred             CCCC--Cccccc----------Ccccc--cccccC-----------CCCc---------ceeccccCCCCCCcchHHHHH
Q 046594          214 GGSN--RRNCEK----------TSEMA--EDINDF-----------VGGQ---------ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       214 ~~~~--~~~~~~----------~~~~s--~DV~S~-----------~~~~---------~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ....  ....+.          ....+  +||||+           .+..         .......    ...+...+..
T Consensus       154 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  229 (257)
T cd08225         154 DSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF----APISPNFSRD  229 (257)
T ss_pred             CCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC----CCCCCCCCHH
Confidence            4322  111111          12222  899991           1111         1111111    2233345578


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+++.+||.     .+|++|||+.+++++
T Consensus       230 ~~~~i~~~l~-----~~p~~Rpt~~~ll~~  254 (257)
T cd08225         230 LRSLISQLFK-----VSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHHHHhc-----cChhhCcCHHHHhhC
Confidence            9999999999     999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.96  E-value=6.1e-30  Score=224.13  Aligned_cols=146  Identities=25%  Similarity=0.247  Sum_probs=124.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|++.+.||+|+||.||++.++   ..++.+|+|.+......    ..+.+|+. ++.++||||+++++++..+ ...++
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~l   77 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHK---ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK-KRLYL   77 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEEC---CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-CeEEE
Confidence            6889999999999999998875   34789999987643322    25666777 9999999999999999876 44599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |+||+++++|.++..... .+++..+..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||++.....
T Consensus        78 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846          78 VFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             EEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence            999999988888776554 689999999999999999999754   899999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.96  E-value=3.3e-29  Score=220.33  Aligned_cols=220  Identities=18%  Similarity=0.149  Sum_probs=162.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCC-CCCcccceeeeeeCCC----C
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSS-SHLNIVTLLGYPQDGL----Q  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l-~h~niv~~~~~~~~~~----~  131 (304)
                      ..+|++.+.+|+|+||.||++...   .+++.+|+|........ ..+..++. ++++ +|||++++++++...+    .
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~---~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   97 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNK---KDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG   97 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEEC---CCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence            457999999999999999998875   35789999998764333 35666666 7777 8999999999987543    3


Q ss_pred             ceEEEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      .+++|+||+++|+|.++++.   ....+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||+
T Consensus        98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~  174 (291)
T cd06639          98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGV  174 (291)
T ss_pred             eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeeccc
Confidence            46999999999999998864   233789999999999999999999654   899999999999999999999999999


Q ss_pred             ccccCCCCC-----Ccccc--cCc----------ccc--ccccc-----------CCCCcc-----eeccccCC--CCCC
Q 046594          209 ANYCSGGSN-----RRNCE--KTS----------EMA--EDIND-----------FVGGQE-----CLDQRLYI--PNEK  251 (304)
Q Consensus       209 a~~~~~~~~-----~~~~~--~~~----------~~s--~DV~S-----------~~~~~~-----~~~~~~~~--~~~~  251 (304)
                      +........     .....  .+.          ..+  +||||           ..+...     ........  +...
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  254 (291)
T cd06639         175 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLL  254 (291)
T ss_pred             chhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCC
Confidence            876543221     00110  011          122  99999           111110     00000000  0111


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+......+.+++.+||+     .||++||++.++++|
T Consensus       255 ~~~~~~~~l~~li~~~l~-----~~p~~Rps~~~il~~  287 (291)
T cd06639         255 HPEKWCRSFNHFISQCLI-----KDFEARPSVTHLLEH  287 (291)
T ss_pred             cccccCHHHHHHHHHHhh-----cChhhCcCHHHHhcC
Confidence            233445679999999999     999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.96  E-value=2.8e-29  Score=217.17  Aligned_cols=216  Identities=18%  Similarity=0.173  Sum_probs=164.0

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ||++.+.||+|+||.||++...   .++..+++|.++.....    ..+.+|+. ++.++|+||+++++++... +.+++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~l   76 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNL---DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR-EKVYI   76 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEEC---CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC-CEEEE
Confidence            6899999999999999998764   35789999998866543    27777878 9999999999999998877 44599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |+||+++++|.+++.... .+++..+..++.|++.||+|||+.   +++|+||+|+||+++.++.+||+|||++......
T Consensus        77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~  152 (264)
T cd06626          77 FMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN  152 (264)
T ss_pred             EEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence            999999999999998765 689999999999999999999764   7999999999999999999999999998876433


Q ss_pred             CC-Ccc-----ccc----------Cc---ccc--ccccc--------------CCCCc---ceeccccCCCCCCcchHH-
Q 046594          216 SN-RRN-----CEK----------TS---EMA--EDIND--------------FVGGQ---ECLDQRLYIPNEKFKITS-  256 (304)
Q Consensus       216 ~~-~~~-----~~~----------~~---~~s--~DV~S--------------~~~~~---~~~~~~~~~~~~~~~~~~-  256 (304)
                      .. ...     .+.          ..   ..+  +||||              |....   .............++... 
T Consensus       153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (264)
T cd06626         153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQ  232 (264)
T ss_pred             CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccc
Confidence            22 100     000          11   122  89999              11110   000000000012233333 


Q ss_pred             -HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 -LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 -~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                       ...+.+++.+||+     .+|++|||+.+++.+
T Consensus       233 ~~~~~~~li~~~l~-----~~p~~R~~~~~i~~~  261 (264)
T cd06626         233 LSPEGKDFLDRCLE-----SDPKKRPTASELLQH  261 (264)
T ss_pred             cCHHHHHHHHHHcc-----CCcccCCCHHHHhcC
Confidence             6778899999999     999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=3.8e-29  Score=226.14  Aligned_cols=150  Identities=25%  Similarity=0.299  Sum_probs=124.6

Q ss_pred             HHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--h--hHHHHHHH-hhCCCCCcccceeeeeeCCC
Q 046594           56 LAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--Q--TKLEEEIL-LKSSSHLNIVTLLGYPQDGL  130 (304)
Q Consensus        56 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~  130 (304)
                      +.+.++|+..+.||+|+||.||++.+.   .+++.+|+|.+.....  .  ..+.+|+. ++.++|+||+++++++....
T Consensus        12 ~~~~~~y~~~~~lg~g~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (353)
T cd07850          12 FTVLKRYQNLKPIGSGAQGIVCAAYDT---VTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK   88 (353)
T ss_pred             hhhhcceEEEEEeccCCCEEEEEEEEC---CCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence            445789999999999999999999876   3578999999864321  1  14556666 99999999999999886432


Q ss_pred             -----CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          131 -----QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       131 -----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                           ...|+||||+++ +|.+.+..   .+++..+..++.|++.||+|||..   |++||||||+||+++.++.+||+|
T Consensus        89 ~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~D  161 (353)
T cd07850          89 SLEEFQDVYLVMELMDA-NLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD  161 (353)
T ss_pred             CccccCcEEEEEeccCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence                 245999999965 88888765   388999999999999999999654   899999999999999999999999


Q ss_pred             cccccccCCC
Q 046594          206 FGAANYCSGG  215 (304)
Q Consensus       206 fgla~~~~~~  215 (304)
                      ||+++.....
T Consensus       162 fg~~~~~~~~  171 (353)
T cd07850         162 FGLARTAGTS  171 (353)
T ss_pred             CccceeCCCC
Confidence            9999876543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=1.6e-29  Score=221.38  Aligned_cols=145  Identities=23%  Similarity=0.272  Sum_probs=123.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .|+..+.+|.|++|.||++.++   .+++.+|||.+......    ..+..|+. +++++||||+++++++.+.+ ..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~~   76 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-KLYL   76 (284)
T ss_pred             CceeeeeecCCCceEEEEEEEC---CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCC-cEEE
Confidence            3788999999999999999876   35789999998754322    25667777 99999999999999998774 4599


Q ss_pred             EEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ||||++ ++|.+++.... ..+++..+..++.|++.||+|||..   +++||||+|+||+++.++.++|+|||++....
T Consensus        77 v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860          77 VFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG  151 (284)
T ss_pred             Eeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence            999996 58988887643 3789999999999999999999754   89999999999999999999999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=3e-29  Score=223.15  Aligned_cols=144  Identities=17%  Similarity=0.162  Sum_probs=117.2

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCC-CCceEEEEeecCCC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRRCLVFEFMQRG  143 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~~lv~e~~~~g  143 (304)
                      .+||+|+||.||++..+.. .++..+|+|.+........+.+|+. +++++||||+++++++... +..+++++||+++ 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~-~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDG-KDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCC-CccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence            5799999999999986533 3468999999876554445666777 9999999999999988643 3456999999975 


Q ss_pred             ChhhHhhhc--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee----CCCCCeeEcccccccc
Q 046594          144 SLRWNLREK--------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL----DELCNAKLAGFGAANY  211 (304)
Q Consensus       144 sL~~~l~~~--------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill----~~~~~~kl~Dfgla~~  211 (304)
                      +|.+++...        ...+++..+..++.|++.||+|||+   .+++||||||+|||+    +.++.+||+|||+++.
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867          85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            888776532        1158899999999999999999965   489999999999999    5667999999999987


Q ss_pred             cCC
Q 046594          212 CSG  214 (304)
Q Consensus       212 ~~~  214 (304)
                      ...
T Consensus       162 ~~~  164 (317)
T cd07867         162 FNS  164 (317)
T ss_pred             cCC
Confidence            643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.96  E-value=3.1e-29  Score=220.97  Aligned_cols=217  Identities=21%  Similarity=0.212  Sum_probs=163.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .++|++.+.+|+|+||.||++...   .++..+++|.+......  ..+.+|+. +++++|||++++++++...+.. |+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~-~l   93 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDV---ATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDEL-WV   93 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEc---CCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcE-EE
Confidence            468999999999999999998754   34688999998654332  25666777 9999999999999999887555 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |+||+++++|.+++.+.  .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        94 v~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~  168 (293)
T cd06647          94 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  168 (293)
T ss_pred             EEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence            99999999999998764  588999999999999999999654   8999999999999999999999999988755432


Q ss_pred             CC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCC--CCCCcchHHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYI--PNEKFKITSLAKLGDI  263 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~--~~~~~~~~~~~~l~~l  263 (304)
                      ..  ....++          ....+  +||||              |....  .........  +....+...+..+.++
T Consensus       169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  248 (293)
T cd06647         169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF  248 (293)
T ss_pred             ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHH
Confidence            21  111111          12223  89999              11111  000000000  0111223345679999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||.     .+|++||++.+++.|
T Consensus       249 i~~~l~-----~~p~~Rp~~~~il~h  269 (293)
T cd06647         249 LNRCLE-----MDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHcc-----CChhhCcCHHHHhcC
Confidence            999999     999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.96  E-value=5.9e-29  Score=221.66  Aligned_cols=220  Identities=20%  Similarity=0.171  Sum_probs=164.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--h---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--T---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..|+..+.+|+|+||.||++...   .++..+|+|.+......  +   .+..|+. +++++|||++++++++..+... 
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~---~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-  100 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDV---RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTA-  100 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEc---CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeE-
Confidence            34778899999999999998875   35789999998743221  1   5666777 9999999999999999887555 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++ +|.+.+.....++++.++..++.|++.||.|||+.   +++||||+|+||+++.++.++|+|||++....
T Consensus       101 ~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         101 WLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             EEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            999999975 88888776555899999999999999999999654   89999999999999999999999999987654


Q ss_pred             CCCC-Cccccc----------Ccccc--cccccC-----------CCCc---------ceeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDINDF-----------VGGQ---------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S~-----------~~~~---------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... .....+          .+.++  +||||+           .+..         .+.....   ........+..+
T Consensus       177 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l  253 (317)
T cd06635         177 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES---PTLQSNEWSDYF  253 (317)
T ss_pred             CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC---CCCCCccccHHH
Confidence            4322 111111          12233  899991           1111         0111111   111223455779


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      .+++.+||+     .+|.+||++.++++++-.+..
T Consensus       254 ~~li~~~l~-----~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         254 RNFVDSCLQ-----KIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             HHHHHHHcc-----CCcccCcCHHHHHhChhhhcc
Confidence            999999999     999999999999998654443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.96  E-value=1.6e-29  Score=222.83  Aligned_cols=215  Identities=19%  Similarity=0.211  Sum_probs=159.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..|.....||+|+||.||++...   .++..+|||.+.......  .+.+|+. ++.++|+||+++++.+..++. .++|
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~-~~lv   97 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEK---HTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDE-LWVV   97 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEEC---CCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCe-EEEE
Confidence            34555678999999999998765   346899999986544332  5667777 999999999999999988744 4999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|.+++...  .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++.......
T Consensus        98 ~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~  172 (292)
T cd06658          98 MEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV  172 (292)
T ss_pred             EeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence            9999999999988653  589999999999999999999764   89999999999999999999999999987553322


Q ss_pred             C--Cccccc----------Ccccc--ccccc--------------CCCCc--c---eeccccCCCCCCcchHHHHHHHHH
Q 046594          217 N--RRNCEK----------TSEMA--EDIND--------------FVGGQ--E---CLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       217 ~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~---~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .  ....++          ....+  +||||              +....  .   .+...+. .........+..+.++
T Consensus       173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  251 (292)
T cd06658         173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP-PRVKDSHKVSSVLRGF  251 (292)
T ss_pred             ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CccccccccCHHHHHH
Confidence            1  111111          11222  99999              11111  0   0001110 0011122345678899


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||.     .||.+|||+.+++++
T Consensus       252 i~~~l~-----~~P~~Rpt~~~il~~  272 (292)
T cd06658         252 LDLMLV-----REPSQRATAQELLQH  272 (292)
T ss_pred             HHHHcc-----CChhHCcCHHHHhhC
Confidence            999999     999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3e-29  Score=223.18  Aligned_cols=146  Identities=20%  Similarity=0.178  Sum_probs=126.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +|+..+.+|+|++|.||++....   +++.+|+|.+......     ..+.+|+. ++.++|+||+++++.+.... ..+
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~   77 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKG---TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET-YLC   77 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcC---CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-EEE
Confidence            68999999999999999998764   4789999999765432     15667777 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          135 LVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++|||+++++|.+++.... ..+++..+..++.|++.||+|||..   +++||||||+||+++.++.++|+|||++....
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574          78 LVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             EEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence            9999999999999987653 3799999999999999999999654   89999999999999999999999999987553

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.5e-29  Score=218.45  Aligned_cols=215  Identities=18%  Similarity=0.197  Sum_probs=160.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCC---CCcccceeeeeeCCCCce
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSS---HLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~---h~niv~~~~~~~~~~~~~  133 (304)
                      .|+..+.+|+|+||.||++.+.   .++..+|+|.+.......   .+.+|+. ++.++   |||++++++++..+ ...
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~-~~~   77 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHV---PTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG-PRL   77 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEc---CCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC-CEE
Confidence            4788899999999999999875   357899999987543222   5666666 77775   99999999998876 445


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +++|||+++++|.+++...  .+++..++.++.|++.||.|||+.   +++||||+|+||+++.++.++|+|||++....
T Consensus        78 ~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06917          78 WIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN  152 (277)
T ss_pred             EEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence            9999999999999998664  689999999999999999999654   89999999999999999999999999987765


Q ss_pred             CCCC--Cccccc----------C-cccc--ccccc--------------CCCCc--ceeccccCCCCCCcch-HHHHHHH
Q 046594          214 GGSN--RRNCEK----------T-SEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKI-TSLAKLG  261 (304)
Q Consensus       214 ~~~~--~~~~~~----------~-~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~-~~~~~l~  261 (304)
                      ....  ....+.          . ..++  +||||              +....  .............++. ..+..+.
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (277)
T cd06917         153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLR  232 (277)
T ss_pred             CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHH
Confidence            4322  111111          1 1223  99999              11111  0000000000112222 2567899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++.+||+     .||++||++.+++++
T Consensus       233 ~~i~~~l~-----~~p~~R~~~~~il~~  255 (277)
T cd06917         233 EFVAACLD-----EEPKERLSAEELLKS  255 (277)
T ss_pred             HHHHHHcC-----CCcccCcCHHHHhhC
Confidence            99999999     999999999999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.96  E-value=2.2e-29  Score=220.43  Aligned_cols=210  Identities=15%  Similarity=0.102  Sum_probs=153.2

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH----hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL----LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~----l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .||+|+||.||++.+.   .+++.+|+|.+......     ..+.++..    +...+|||++.+++++...+. .++||
T Consensus         1 ~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~lv~   76 (279)
T cd05633           1 IIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDK-LCFIL   76 (279)
T ss_pred             CcccCCCeEEEEEEEC---CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCe-EEEEE
Confidence            3799999999998875   35789999988653221     12223322    333479999999999987744 49999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++|+|.+++...+ .+++..+..++.|++.||+|||..   +++||||||+|||++.++.++|+|||++........
T Consensus        77 e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~  152 (279)
T cd05633          77 DLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  152 (279)
T ss_pred             ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc
Confidence            9999999999988765 799999999999999999999764   799999999999999999999999999875533222


Q ss_pred             Cccccc-----------Ccccc--ccccc--------------CCCCc----ceeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          218 RRNCEK-----------TSEMA--EDIND--------------FVGGQ----ECLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       218 ~~~~~~-----------~~~~s--~DV~S--------------~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                      ....++           ...++  +||||              |....    ..............+...+..+.+++.+
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  232 (279)
T cd05633         153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEG  232 (279)
T ss_pred             cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHH
Confidence            111111           11122  89999              11111    0011100000223455567889999999


Q ss_pred             hccccCCCCCCCCCC-----CHHHHHHH
Q 046594          267 CISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       267 cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      ||.     .||.+||     |+.++++|
T Consensus       233 ~l~-----~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         233 LLQ-----RDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             Hhc-----CCHHHhcCCCCCCHHHHHhC
Confidence            999     9999999     69999887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.96  E-value=3.4e-29  Score=217.20  Aligned_cols=216  Identities=22%  Similarity=0.186  Sum_probs=160.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----h--hHHHHHHH-hhCCCCCcccceeeeeeCCC-C
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----Q--TKLEEEIL-LKSSSHLNIVTLLGYPQDGL-Q  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~-~  131 (304)
                      .|++.+.+|+|+||.||.+...   .++..||+|.+.....     .  ..+..|+. +++++||||+++++++.+.. .
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~---~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   79 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDA---DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMER   79 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEc---CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCc
Confidence            5888999999999999998875   3578999998864221     1  15667777 99999999999999887653 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .++++|||+++++|.+++.... .+++.....++.|++.||+|||+.   +++|+||||+||+++.++.++|+|||++..
T Consensus        80 ~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          80 TLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             eEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence            5689999999999999988765 689999999999999999999654   799999999999999999999999999875


Q ss_pred             cCCCCC-----Cccccc----------Ccccc--ccccc-----------CCCCc------ceeccccCCCCCCcchHHH
Q 046594          212 CSGGSN-----RRNCEK----------TSEMA--EDIND-----------FVGGQ------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       212 ~~~~~~-----~~~~~~----------~~~~s--~DV~S-----------~~~~~------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ......     ....++          ....+  +||||           ..+..      .+............+....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVS  235 (265)
T ss_pred             cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhC
Confidence            432110     001111          11122  89999           11111      1100000000233455666


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+++.+|+.      +|++||++++++++
T Consensus       236 ~~~~~~i~~~l~------~p~~Rp~~~~il~~  261 (265)
T cd06652         236 DHCRDFLKRIFV------EAKLRPSADELLRH  261 (265)
T ss_pred             HHHHHHHHHHhc------ChhhCCCHHHHhcC
Confidence            788899999987      79999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.96  E-value=2.9e-29  Score=215.84  Aligned_cols=217  Identities=19%  Similarity=0.256  Sum_probs=167.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|++.+.+|.|+||.||++.+.   .++..+++|++......    ..+.+|+. ++.++|+|++++.+.+... ...++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-~~~~l   76 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRK---SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-GKLCI   76 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEc---CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-CEEEE
Confidence            5888999999999999999875   35789999999865432    26677777 9999999999999999887 55599


Q ss_pred             EEeecCCCChhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ++||+++++|.+++....   ..+++..+..++.+++.||+|||+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~  153 (258)
T cd08215          77 VMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVL  153 (258)
T ss_pred             EEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeec
Confidence            999999999999998752   4899999999999999999999664   8999999999999999999999999999876


Q ss_pred             CCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ....+.          ....+  +||||              +....  ++............+...+..+.+
T Consensus       154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (258)
T cd08215         154 SSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRN  233 (258)
T ss_pred             ccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence            54431  111111          11222  99999              11111  111111100013344456688999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||.     .+|++|||+.+++++
T Consensus       234 ~i~~~l~-----~~p~~Rp~~~~ll~~  255 (258)
T cd08215         234 LVSSLLQ-----KDPEERPSIAQILQS  255 (258)
T ss_pred             HHHHHcC-----CChhhCcCHHHHhcC
Confidence            9999999     999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.96  E-value=3.8e-30  Score=216.74  Aligned_cols=154  Identities=18%  Similarity=0.161  Sum_probs=130.5

Q ss_pred             HHhhccccccCCccccceeeecceeecC-CCcEEEEEEeccccchh-----HHHHHHHhhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMASQT-----KLEEEILLKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +..|+..+.||+|.||.||+|..+.+.. -...+|+|+++.+...+     ..+|...++.++|||++.+..++...+..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            4579999999999999999996544321 13489999998875544     66666669999999999999999886677


Q ss_pred             eEEEEeecCCCChhhHhhhcCC----CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC----CCeeEc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG----PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL----CNAKLA  204 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~----~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~----~~~kl~  204 (304)
                      +++++||.++ +|.+.++-+..    .++...+..|+.||+.|+.|||+..   |+||||||+|||+..+    |.+||+
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEee
Confidence            8999999999 99998875432    7899999999999999999998775   9999999999999877    899999


Q ss_pred             ccccccccCCCC
Q 046594          205 GFGAANYCSGGS  216 (304)
Q Consensus       205 Dfgla~~~~~~~  216 (304)
                      |||+++.+....
T Consensus       179 DlGlaR~~~~pl  190 (438)
T KOG0666|consen  179 DLGLARLFNNPL  190 (438)
T ss_pred             cccHHHHhhccc
Confidence            999999886654

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-30  Score=251.86  Aligned_cols=216  Identities=19%  Similarity=0.142  Sum_probs=174.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ||+....+|.|.||.||.+...   .+|...|+|-+.......    ...+|.. +..++|||+|+++|+-.+.+.. +|
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~---~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv-~I 1311 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNL---DTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV-YI 1311 (1509)
T ss_pred             eeccccccCCcceeeeEEeecC---CccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH-HH
Confidence            5666789999999999999876   468999999987655443    6778888 9999999999999999888555 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      .||||++|+|+++++..+ -.++.....+..|++.|++|||++   |||||||||+||+++.+|.+|++|||.|..+...
T Consensus      1312 FMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            999999999999998765 678888889999999999999775   8999999999999999999999999999988665


Q ss_pred             CC------CcccccCcccc---------------ccccc-------CCCCc----------ceeccccCCCCCCcchHHH
Q 046594          216 SN------RRNCEKTSEMA---------------EDIND-------FVGGQ----------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       216 ~~------~~~~~~~~~~s---------------~DV~S-------~~~~~----------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ..      ....|++.||+               .||||       +.++.          .++-.--..-.+.+|...+
T Consensus      1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls 1467 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLS 1467 (1509)
T ss_pred             hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhh
Confidence            41      23444433333               89999       11111          2222111111356778889


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+-.+++.+||+     .||..|-++.|++++
T Consensus      1468 ~~g~dFle~Cl~-----~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1468 SEGRDFLEHCLE-----QDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HhHHHHHHHHHh-----cCchhhhHHHHHHHh
Confidence            999999999999     999999999999876

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.96  E-value=4.8e-29  Score=220.97  Aligned_cols=143  Identities=17%  Similarity=0.221  Sum_probs=124.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .|++.+.+|+|+||.||++.++.   .++.|++|.+......     ..+.+|+. ++.++||||+++++.+..+ ..++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~   77 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKE---TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK-RHLC   77 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECC---CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC-CEEE
Confidence            57889999999999999998763   4689999998754321     15567777 9999999999999998877 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      +||||+++++|.+++...+ .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||+++.
T Consensus        78 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          78 MVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            9999999999999998765 799999999999999999999764   899999999999999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.96  E-value=3.5e-29  Score=220.16  Aligned_cols=145  Identities=23%  Similarity=0.211  Sum_probs=123.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||.+.++.   ++..+|+|.+.......   .+.+|+. ++.++|+||+++++++..++ ..++
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~l   80 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRI---NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE-TLTF   80 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcC---CCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC-eEEE
Confidence            579999999999999999998763   46899999987543322   4556677 99999999999999998774 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |+||++ ++|.+.+......+++..+..++.|++.||+|||..   +++|+||||+|||++.++.++|+|||+++..
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870          81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccccccc
Confidence            999996 588777765544788999999999999999999654   8999999999999999999999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.96  E-value=1.7e-29  Score=221.43  Aligned_cols=147  Identities=26%  Similarity=0.257  Sum_probs=124.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|++.+.+|+|++|.||++.++.   +++.+++|.++.....    ..+.+|+. ++.++|+||+++++++..++ .+++
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~---~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~i   77 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKA---TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-RLYL   77 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCC---CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC-EEEE
Confidence            68999999999999999998763   4689999998753222    26777777 99999999999999998864 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      +|||++++.+..+..... .+++..+..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||++......
T Consensus        78 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~  153 (288)
T cd07833          78 VFEYVERTLLELLEASPG-GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR  153 (288)
T ss_pred             EEecCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence            999999866666555443 799999999999999999999764   8999999999999999999999999998876544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.96  E-value=6e-29  Score=217.32  Aligned_cols=215  Identities=21%  Similarity=0.209  Sum_probs=155.8

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCC-CceEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGL-QRRCL  135 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~-~~~~l  135 (304)
                      |++.+.+|+|+||.||++.+.   .++..+|+|.++......   ....|+. ++++ +|+|++++++++.+.. +.+++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~---~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSR---KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEc---CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence            678899999999999999876   357899999987643221   2223444 7777 4999999999988762 34599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |+||+++ +|.+.+......+++..+..++.|++.||+|||+.   +++||||+|+||+++. +.+||+|||++......
T Consensus        78 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          78 VFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK  152 (282)
T ss_pred             EEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence            9999975 88888876555799999999999999999999764   8999999999999999 99999999999866433


Q ss_pred             CC-Cccccc-----------Ccccc--ccccc--------------CCCCc--ce-------ec---c----ccCC---C
Q 046594          216 SN-RRNCEK-----------TSEMA--EDIND--------------FVGGQ--EC-------LD---Q----RLYI---P  248 (304)
Q Consensus       216 ~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~--~~-------~~---~----~~~~---~  248 (304)
                      .. ....++           ....+  +||||              |+...  +.       ..   +    ....   .
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (282)
T cd07831         153 PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM  232 (282)
T ss_pred             CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccc
Confidence            22 110011           12223  99999              21111  00       00   0    0000   0


Q ss_pred             CCCc-----------chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          249 NEKF-----------KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       249 ~~~~-----------~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ...+           ....+..+.+++.+||.     +||++|||+.+++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-----~~P~~R~~~~~~l~~  279 (282)
T cd07831         233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLA-----YDPDERITAKQALRH  279 (282)
T ss_pred             cccCcccccccHHHHcccccHHHHHHHHHHhc-----cCcccccCHHHHhhC
Confidence            0001           12346889999999999     999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.96  E-value=6.7e-29  Score=217.97  Aligned_cols=218  Identities=19%  Similarity=0.155  Sum_probs=157.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCC-CCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~  134 (304)
                      ..|+..+.||+|+||.||++.+.   .+++.+|+|.+.......   .+..|+. +.++. |+||+++++++...+.. +
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~-~   79 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHK---PSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDC-W   79 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEEC---CCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcE-E
Confidence            45677889999999999998876   357899999987543222   5666666 88885 99999999998887555 9


Q ss_pred             EEEeecCCCChhhHhh---h-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          135 LVFEFMQRGSLRWNLR---E-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~---~-~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ++|||++. +|.++..   . ....+++..+..++.|++.||+|||+.  .+++||||||+||+++.++.++|+|||++.
T Consensus        80 ~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  156 (288)
T cd06616          80 ICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISG  156 (288)
T ss_pred             EEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhH
Confidence            99999865 6655432   2 223799999999999999999999753  379999999999999999999999999997


Q ss_pred             ccCCCCC-Cccccc----------C---cccc--ccccc--------------CCCCcc-------eeccccCCCCCCcc
Q 046594          211 YCSGGSN-RRNCEK----------T---SEMA--EDIND--------------FVGGQE-------CLDQRLYIPNEKFK  253 (304)
Q Consensus       211 ~~~~~~~-~~~~~~----------~---~~~s--~DV~S--------------~~~~~~-------~~~~~~~~~~~~~~  253 (304)
                      ....... ....++          .   ..++  +||||              |.....       .............+
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd06616         157 QLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEE  236 (288)
T ss_pred             HhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCC
Confidence            6543322 111111          1   1233  99999              111111       00000000011222


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ...+..+.+++.+||+     .||++|||+.+++++
T Consensus       237 ~~~~~~l~~li~~~l~-----~~p~~Rpt~~~i~~~  267 (288)
T cd06616         237 REFSPSFVNFINLCLI-----KDESKRPKYKELLEH  267 (288)
T ss_pred             CccCHHHHHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            3467789999999999     999999999999975

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.96  E-value=4.4e-29  Score=220.50  Aligned_cols=213  Identities=20%  Similarity=0.191  Sum_probs=158.2

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      |.....+|+|+||.||++.+.   .++..+|+|.+......  ..+.+|+. ++.++|||++++++++..++. .++++|
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~-~~iv~e   98 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREK---HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEE-LWVLME   98 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEc---CCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCe-EEEEEe
Confidence            445668999999999998775   35789999998654322  25666777 999999999999999988744 499999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++++|.+++...  .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++........ 
T Consensus        99 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~  173 (297)
T cd06659          99 FLQGGALTDIVSQT--RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK  173 (297)
T ss_pred             cCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccccc
Confidence            99999999987653  589999999999999999999654   899999999999999999999999999875543221 


Q ss_pred             -Cccccc----------Ccccc--ccccc-----------CCC---Cc--c---eeccccCCCCCCcchHHHHHHHHHHH
Q 046594          218 -RRNCEK----------TSEMA--EDIND-----------FVG---GQ--E---CLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S-----------~~~---~~--~---~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                       ....+.          ....+  +||||           ..+   ..  +   .+.... .+...........+.+++.
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i~  252 (297)
T cd06659         174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP-PPKLKNAHKISPVLRDFLE  252 (297)
T ss_pred             ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC-CCCccccCCCCHHHHHHHH
Confidence             111111          11122  89999           111   00  0   000000 0011122234567899999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +||+     .+|++||++.+++++
T Consensus       253 ~~l~-----~~P~~Rps~~~ll~~  271 (297)
T cd06659         253 RMLT-----REPQERATAQELLDH  271 (297)
T ss_pred             HHhc-----CCcccCcCHHHHhhC
Confidence            9999     999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.96  E-value=5.5e-29  Score=215.61  Aligned_cols=217  Identities=19%  Similarity=0.205  Sum_probs=163.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +|++.+.+|.|+||.||++....   ++..+++|++......   ..+.+|+. ++.++|+|++++++.+...+ ..+++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~iv   77 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLP---NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD-ELWLV   77 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcC---CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC-EEEEE
Confidence            68899999999999999998653   5789999998754322   26777777 99999999999999988774 45999


Q ss_pred             EeecCCCChhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          137 FEFMQRGSLRWNLREKG--GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +|++++++|.+++....  ..+++..+..++.|++.||+|||+   .+++||||+|+||++++++.++|+|||++.....
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence            99999999999997653  268999999999999999999965   4899999999999999999999999999876644


Q ss_pred             CCCC------ccccc----------Cc-ccc--cccccC-----------CCCc-----ceeccccCCCCCCcc-----h
Q 046594          215 GSNR------RNCEK----------TS-EMA--EDINDF-----------VGGQ-----ECLDQRLYIPNEKFK-----I  254 (304)
Q Consensus       215 ~~~~------~~~~~----------~~-~~s--~DV~S~-----------~~~~-----~~~~~~~~~~~~~~~-----~  254 (304)
                      ....      ...++          .. ..+  +|+||+           .+..     +............++     .
T Consensus       155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd06610         155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK  234 (267)
T ss_pred             CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccc
Confidence            3211      00111          11 222  899991           1110     001111100001111     2


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+..+.+++.+||.     .||++|||+.++++|
T Consensus       235 ~~~~~~~~li~~~l~-----~~p~~Rp~~~~ll~~  264 (267)
T cd06610         235 KYSKSFRKMISLCLQ-----KDPSKRPTAEELLKH  264 (267)
T ss_pred             cccHHHHHHHHHHcC-----CChhhCcCHHHHhhC
Confidence            456788999999999     999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.96  E-value=5.7e-29  Score=215.15  Aligned_cols=217  Identities=18%  Similarity=0.202  Sum_probs=167.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc---hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .|++.+.||+|++|.+|++.+..   +++.+++|++.....   ...+..|+. +++++|+|++++++++... ..++++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~---~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~lv   77 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKP---TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE-GEISIV   77 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcC---CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-CeEEEE
Confidence            47888999999999999998864   478999999887654   237777877 9999999999999999888 455999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      +||+++++|.+++.... .+++..++.++.|+++||+|||+.  .+++||||+|+||+++.++.++|+|||++.......
T Consensus        78 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          78 LEYMDGGSLADLLKKVG-KIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             EEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence            99999999999998765 799999999999999999999541  589999999999999999999999999988764433


Q ss_pred             CC--ccccc----------Ccccc--ccccc-----------CCCCc--------ceeccccCCCCCCcchH-HHHHHHH
Q 046594          217 NR--RNCEK----------TSEMA--EDIND-----------FVGGQ--------ECLDQRLYIPNEKFKIT-SLAKLGD  262 (304)
Q Consensus       217 ~~--~~~~~----------~~~~s--~DV~S-----------~~~~~--------~~~~~~~~~~~~~~~~~-~~~~l~~  262 (304)
                      ..  ...+.          ....+  +||||           ..+..        +.............+.. .+..+.+
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  234 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRD  234 (264)
T ss_pred             CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence            21  11111          12222  89999           11111        01111010012233444 6788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||.     .+|++|||+.+++++
T Consensus       235 li~~~l~-----~~p~~R~~~~~ll~~  256 (264)
T cd06623         235 FISACLQ-----KDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHcc-----CChhhCCCHHHHHhC
Confidence            9999999     999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.96  E-value=1.1e-28  Score=214.39  Aligned_cols=217  Identities=17%  Similarity=0.189  Sum_probs=159.8

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccc---------hh---HHHHHHH-hh-CCCCCcccceeeeee
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---------QT---KLEEEIL-LK-SSSHLNIVTLLGYPQ  127 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---------~~---~~~~e~~-l~-~l~h~niv~~~~~~~  127 (304)
                      |++.+.||+|+||.||.+.....  .++.+|+|.+.....         ..   .+..|.. +. .++||||+++++++.
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   79 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNN--GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL   79 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCC--CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc
Confidence            78889999999999999987642  358999998764321         11   3444554 44 579999999999998


Q ss_pred             CCCCceEEEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          128 DGLQRRCLVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       128 ~~~~~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      .++ ..+++|||+++++|.+++..   ....+++..++.++.|++.||.|||+  ..+++|+||+|+||+++.++.++|+
T Consensus        80 ~~~-~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~  156 (269)
T cd08528          80 END-RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTIT  156 (269)
T ss_pred             cCC-eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEe
Confidence            875 44999999999999988754   23378999999999999999999963  2479999999999999999999999


Q ss_pred             ccccccccCCCCC-Cccccc----------Ccccc--ccccc-----------CCCCc---------ceeccccCCCCCC
Q 046594          205 GFGAANYCSGGSN-RRNCEK----------TSEMA--EDIND-----------FVGGQ---------ECLDQRLYIPNEK  251 (304)
Q Consensus       205 Dfgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S-----------~~~~~---------~~~~~~~~~~~~~  251 (304)
                      |||++........ ....+.          ...++  +||||           .++..         .+.+...   ...
T Consensus       157 dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~  233 (269)
T cd08528         157 DFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVY---EPL  233 (269)
T ss_pred             cccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccC---CcC
Confidence            9999986654321 111111          22233  89999           11111         1111111   111


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      .....+..+.+++.+||+     .||++||++.|+..+++
T Consensus       234 ~~~~~~~~l~~li~~cl~-----~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         234 PEGMYSEDVTDVITSCLT-----PDAEARPDIIQVSAMIS  268 (269)
T ss_pred             CcccCCHHHHHHHHHHCC-----CCCccCCCHHHHHHHhc
Confidence            112345789999999999     99999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.96  E-value=6.8e-29  Score=213.68  Aligned_cols=217  Identities=17%  Similarity=0.139  Sum_probs=164.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|++.+.+|+|++|.+|++...   .+++.+++|.+......    ..+.+|+. ++.++|+||+++++++... ...++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~   76 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRL---SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-NKLCI   76 (256)
T ss_pred             CceEeeeecCCCceeEEEEEEC---CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-CEEEE
Confidence            5889999999999999998765   35789999998754321    15556667 9999999999999999887 45599


Q ss_pred             EEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |+||+++++|.+++...   ...+++..++.++.|++.||+|||.   .+++|+||+|+||+++.++.++|+|||++...
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~  153 (256)
T cd08530          77 VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVL  153 (256)
T ss_pred             EehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhh
Confidence            99999999999998763   2268999999999999999999965   48999999999999999999999999999776


Q ss_pred             CCCCCCccccc----------Cccc--cccccc-----------CCCCc-----ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEM--AEDIND-----------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~--s~DV~S-----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .........+.          ...+  .+|+||           ..+..     +.............+......+.+++
T Consensus       154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  233 (256)
T cd08530         154 KKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFI  233 (256)
T ss_pred             ccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHH
Confidence            54422111111          1222  299999           11111     00000010001234455678899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||.     .+|++|||+.+++++
T Consensus       234 ~~~l~-----~~p~~Rp~~~~~l~~  253 (256)
T cd08530         234 RSMLQ-----VKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHcC-----CCcccCCCHHHHhcC
Confidence            99999     999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=3.8e-29  Score=224.77  Aligned_cols=226  Identities=17%  Similarity=0.206  Sum_probs=166.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~---  130 (304)
                      ..+|++.+.+|+|+||.||.+.+.   ..+..||+|.+......    ..+.+|+. ++.++|+||+++++++....   
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~   80 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNS---ETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREA   80 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEec---CCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccc
Confidence            468999999999999999999875   35789999998753211    14556667 99999999999999876542   


Q ss_pred             -CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       131 -~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                       ..+++++||+. ++|.+++...+ .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        81 ~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~  155 (337)
T cd07858          81 FNDVYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA  155 (337)
T ss_pred             cCcEEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence             24699999996 59998887665 799999999999999999999654   8999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc-----------Ccccc--ccccc--------------CCCCc-----------------c----
Q 046594          210 NYCSGGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ-----------------E----  239 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~-----------------~----  239 (304)
                      ........  ....++           ....+  +||||              |...+                 +    
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T cd07858         156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF  235 (337)
T ss_pred             cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence            87644311  100111           12233  99999              11110                 0    


Q ss_pred             eeccc-------cCC-CC---CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHhhh
Q 046594          240 CLDQR-------LYI-PN---EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQLF  297 (304)
Q Consensus       240 ~~~~~-------~~~-~~---~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~~~  297 (304)
                      +.+..       +.. ..   .....+.+..+.+++.+||+     .||++|||+.++++|  ++.+....
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-----~~P~~Rps~~ell~h~~~~~~~~~~  301 (337)
T cd07858         236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLV-----FDPSKRITVEEALAHPYLASLHDPS  301 (337)
T ss_pred             cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhc-----CChhhccCHHHHHcCcchhhhcCcc
Confidence            00000       000 00   01112456778999999999     999999999999998  77664433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.96  E-value=4.4e-29  Score=218.49  Aligned_cols=145  Identities=24%  Similarity=0.318  Sum_probs=124.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +|+..+.||.|++|.||++.+.   .+|..+|+|.++.....   ..+.+|+. +++++|+||+++++++...+.. ++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-~lv   76 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNR---TTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKL-MLV   76 (284)
T ss_pred             CceEeeeeccCCceEEEEEEEC---CCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcE-EEE
Confidence            4889999999999999999875   35789999998765432   25556667 9999999999999999888544 999


Q ss_pred             EeecCCCChhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          137 FEFMQRGSLRWNLREKG--GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |||+++ +|.+++....  ..+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++....
T Consensus        77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~  151 (284)
T cd07836          77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG  151 (284)
T ss_pred             EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence            999985 8988887654  3689999999999999999999654   89999999999999999999999999997553

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.96  E-value=1.3e-28  Score=211.63  Aligned_cols=214  Identities=22%  Similarity=0.191  Sum_probs=168.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCC-CceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGL-QRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~~~  134 (304)
                      +|+..+.+|+|++|.||++....   ++..+++|.......    ...+.+|+. +++++|+||+++++.+.... ..++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKD---TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLN   77 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECC---CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEE
Confidence            47888999999999999998763   578999999987653    237778888 99999999999999998762 3449


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +++||+++++|.+++.... .+++..++.++.|++.||+|||+   .+++|+||+|+||+++.++.++|+|||.+.....
T Consensus        78 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  153 (260)
T cd06606          78 IFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGD  153 (260)
T ss_pred             EEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence            9999999999999998876 89999999999999999999976   4899999999999999999999999999887655


Q ss_pred             CCC----Cccccc----------Ccccc--ccccc--------------CCCCc-------ceeccccCCCCCCcchHHH
Q 046594          215 GSN----RRNCEK----------TSEMA--EDIND--------------FVGGQ-------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       215 ~~~----~~~~~~----------~~~~s--~DV~S--------------~~~~~-------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ...    ....+.          ....+  +||||              +....       .......   ....+...+
T Consensus       154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  230 (260)
T cd06606         154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE---PPEIPEHLS  230 (260)
T ss_pred             ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCC---CcCCCcccC
Confidence            431    111111          11123  99999              11111       1111111   234555667


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+++.+|++     .||++||++.+++++
T Consensus       231 ~~l~~~i~~~l~-----~~p~~Rp~~~~ll~~  257 (260)
T cd06606         231 EEAKDFLRKCLR-----RDPKKRPTADELLQH  257 (260)
T ss_pred             HHHHHHHHHhCc-----CChhhCCCHHHHhhC
Confidence            889999999999     999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=7.1e-29  Score=220.21  Aligned_cols=149  Identities=23%  Similarity=0.232  Sum_probs=126.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCC-Cc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGL-QR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||+|.++......    .+.+|+. +++++|+|++++++++.... +.
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDT---TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDS   82 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEEC---CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCe
Confidence            467999999999999999999876   357899999987543222    3445666 99999999999999987653 34


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++ +|.+++......+++.++..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++...
T Consensus        83 ~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~  158 (309)
T cd07845          83 IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY  158 (309)
T ss_pred             EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence            6999999975 89888877555799999999999999999999664   8999999999999999999999999999876


Q ss_pred             CC
Q 046594          213 SG  214 (304)
Q Consensus       213 ~~  214 (304)
                      ..
T Consensus       159 ~~  160 (309)
T cd07845         159 GL  160 (309)
T ss_pred             CC
Confidence            54

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.96  E-value=7e-29  Score=216.80  Aligned_cols=210  Identities=18%  Similarity=0.150  Sum_probs=155.5

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      ||+|+||.||++.+.   .+|+.+|+|.+......     ..+..|+. ++.++||||+++++.+...+ ..|+||||++
T Consensus         1 lg~g~~g~vy~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~~~   76 (277)
T cd05577           1 LGKGGFGEVCACQVK---ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD-DLCLVMTLMN   76 (277)
T ss_pred             CCCCCceeEEEEEEc---CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC-eEEEEEecCC
Confidence            689999999998876   35789999998653221     14455666 99999999999999988774 4599999999


Q ss_pred             CCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-Cc
Q 046594          142 RGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-RR  219 (304)
Q Consensus       142 ~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~  219 (304)
                      +++|.+++..... .+++..+..++.|++.||.|||+.   +++||||+|+||+++.++.++|+|||++........ ..
T Consensus        77 ~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  153 (277)
T cd05577          77 GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKG  153 (277)
T ss_pred             CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccc
Confidence            9999999876543 689999999999999999999654   899999999999999999999999999876543221 11


Q ss_pred             cccc----------Ccccc--ccccc--------------CCCCc-----ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          220 NCEK----------TSEMA--EDIND--------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       220 ~~~~----------~~~~s--~DV~S--------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                      ..+.          ....+  +||||              |....     ..+...........+...+..+.+++.+||
T Consensus       154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  233 (277)
T cd05577         154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALL  233 (277)
T ss_pred             ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHc
Confidence            1111          11222  89999              11110     000011100022344456788999999999


Q ss_pred             cccCCCCCCCCCC-----CHHHHHHH
Q 046594          269 SCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      +     .||.+||     ++.++++|
T Consensus       234 ~-----~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         234 Q-----KDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             c-----CChhHccCCCcccHHHHHhC
Confidence            9     9999999     77777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.96  E-value=1.4e-28  Score=215.86  Aligned_cols=214  Identities=20%  Similarity=0.234  Sum_probs=159.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      +|...+.||+|++|.||++...   .+++.+++|.+.......  .+.+|+. ++.++|||++++++++...+.. ++++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~-~~v~   95 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDK---STGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDEL-WVVM   95 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEEC---CCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeE-EEEE
Confidence            4566779999999999998865   356899999986543322  5666777 9999999999999998877544 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++++|.+++...  ++++..+..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||++........
T Consensus        96 e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~  170 (285)
T cd06648          96 EFLEGGALTDIVTHT--RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP  170 (285)
T ss_pred             eccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence            999999999998873  689999999999999999999654   899999999999999999999999998875543221


Q ss_pred             --Cccccc----------Ccccc--ccccc--------------CCCCc--ceec---cccCCCCCCcchHHHHHHHHHH
Q 046594          218 --RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLD---QRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       218 --~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~---~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                        ....++          ...++  +||||              +....  ....   ... .+....+...+..+.+++
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li  249 (285)
T cd06648         171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PPKLKNLHKVSPRLRSFL  249 (285)
T ss_pred             ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CCCCcccccCCHHHHHHH
Confidence              111111          11122  89999              11111  0000   000 001111223557899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||.     .+|++|||+.+++++
T Consensus       250 ~~~l~-----~~p~~Rpt~~~il~~  269 (285)
T cd06648         250 DRMLV-----RDPAQRATAAELLNH  269 (285)
T ss_pred             HHHcc-----cChhhCcCHHHHccC
Confidence            99999     999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.96  E-value=1.3e-28  Score=213.09  Aligned_cols=205  Identities=20%  Similarity=0.149  Sum_probs=158.0

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      ||.|++|.||++.+..   .++.+++|.+......     ..+..|+. ++.++||||+++++.+.++. .+++++||++
T Consensus         1 lg~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~   76 (262)
T cd05572           1 LGVGGFGRVELVKVKS---KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK-YIYMLMEYCL   76 (262)
T ss_pred             CCCCCceEEEEEEECC---CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC-ccEEEEecCC
Confidence            6999999999999863   4789999998754322     26777777 99999999999999988774 4599999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-Ccc
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-RRN  220 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~  220 (304)
                      +++|.+++.... .+++..+..++.|++.||+|||+   .+++|+||+|+||+++.++.++|+|||++........ ...
T Consensus        77 ~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~  152 (262)
T cd05572          77 GGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTF  152 (262)
T ss_pred             CCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccc
Confidence            999999998765 68999999999999999999965   4899999999999999999999999999987755321 111


Q ss_pred             ccc----------Ccccc--ccccc--------------CCCCc--------ceeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          221 CEK----------TSEMA--EDIND--------------FVGGQ--------ECLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       221 ~~~----------~~~~s--~DV~S--------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                      .+.          ...++  +|+||              +....        .+.+...   ...++...+..+.+++.+
T Consensus       153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~  229 (262)
T cd05572         153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG---KLEFPNYIDKAAKDLIKQ  229 (262)
T ss_pred             cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC---CCCCCcccCHHHHHHHHH
Confidence            111          11222  89999              11111        1111111   234555557889999999


Q ss_pred             hccccCCCCCCCCCCC-----HHHHHH
Q 046594          267 CISCCSNIEGNENHPK-----IVDVLS  288 (304)
Q Consensus       267 cl~~~~~~~dp~~Rps-----~~~vl~  288 (304)
                      ||.     .||++||+     +.|+++
T Consensus       230 ~l~-----~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         230 LLR-----RNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             Hcc-----CChhhCcCCcccCHHHHhc
Confidence            999     99999999     677765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.96  E-value=6.6e-29  Score=214.74  Aligned_cols=216  Identities=17%  Similarity=0.216  Sum_probs=155.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEecc---ccc---h-hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRY---MAS---Q-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~---~~~---~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ||++.+.||+|+||.||++.+...   +..+++|..+.   ...   . ..+..|.. +++++||||+++++++.+... 
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-   76 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKA---VAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDA-   76 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCC---CCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCc-
Confidence            689999999999999999887643   23344444432   111   1 14555666 999999999999999987754 


Q ss_pred             eEEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      .++++||+++++|.+++...   ...+++..++.++.|++.||+|||+   .+++|+||+|+||+++. +.++|+|||++
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~  152 (260)
T cd08222          77 FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVS  152 (260)
T ss_pred             eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCce
Confidence            49999999999999988642   2379999999999999999999965   48999999999999975 57999999998


Q ss_pred             cccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHH
Q 046594          210 NYCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ........  ....+.          ....+  +|+||              +....  ..............+...+..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (260)
T cd08222         153 RLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQ  232 (260)
T ss_pred             eecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHH
Confidence            76643322  111111          11122  89999              11111  100111100022344566788


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+++.+||.     .||++||++.+++++
T Consensus       233 ~~~li~~~l~-----~~p~~Rp~~~~il~~  257 (260)
T cd08222         233 LNSIMQSMLN-----KDPSLRPSAAEILRN  257 (260)
T ss_pred             HHHHHHHHhc-----CChhhCcCHHHHhhC
Confidence            9999999999     999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=5.7e-29  Score=223.37  Aligned_cols=212  Identities=18%  Similarity=0.153  Sum_probs=166.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCC-CCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~  133 (304)
                      +.|+++++||+||.+.||++..-    +.+.+|+|+......+.    -|..|+. |.++ .|.+||++++|-..+ +.+
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s----~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-~~l  435 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNS----DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-GYL  435 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecC----CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC-ceE
Confidence            57999999999999999998763    44788888876543332    7778887 8888 689999999998876 677


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||-+. +|.++|......++...+..|..|++.|+.++|++   ||||.||||.|+|+-. |.+||+|||+|..+.
T Consensus       436 YmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~  510 (677)
T KOG0596|consen  436 YMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ  510 (677)
T ss_pred             EEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence            999999866 99999998876555448889999999999999775   8999999999999865 689999999999887


Q ss_pred             CCCC----CcccccC---------------------cccc--ccccc-----------CCCCc----------ceecccc
Q 046594          214 GGSN----RRNCEKT---------------------SEMA--EDIND-----------FVGGQ----------ECLDQRL  245 (304)
Q Consensus       214 ~~~~----~~~~~~~---------------------~~~s--~DV~S-----------~~~~~----------~~~~~~~  245 (304)
                      ...+    ...+|+.                     ..++  +||||           .++..          .+.++..
T Consensus       511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~  590 (677)
T KOG0596|consen  511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNH  590 (677)
T ss_pred             ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCc
Confidence            7655    3445551                     1123  89999           22221          5666655


Q ss_pred             CCCCCCcchHHH-HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          246 YIPNEKFKITSL-AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       246 ~~~~~~~~~~~~-~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                         .-+||.--. .++.++++.||.     +||.+|||+.++|+|
T Consensus       591 ---~Iefp~~~~~~~li~~mK~CL~-----rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  591 ---EIEFPDIPENDELIDVMKCCLA-----RDPKKRWSIPELLQH  627 (677)
T ss_pred             ---cccccCCCCchHHHHHHHHHHh-----cCcccCCCcHHHhcC
Confidence               334443222 239999999999     999999999999975

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.1e-28  Score=213.29  Aligned_cols=209  Identities=15%  Similarity=0.109  Sum_probs=151.9

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch--h----HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--T----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.+|+|+||.||++....   +++.+|+|.+......  .    ...+... ....+|+|++++++++..+ +.+++++|
T Consensus         2 ~~l~~g~~~~v~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-~~~~lv~e   77 (260)
T cd05611           2 KPISKGAFGSVYLAKKRS---TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK-DYLYLVME   77 (260)
T ss_pred             ccCCcCCCeeEEEEEecC---CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC-CeEEEEEe
Confidence            578999999999998753   4789999998754321  1    2233333 5566999999999999877 45599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++++|.+++.... .+++..+..++.|++.||.|||..   +++||||+|+||+++.++.++|+|||++........ 
T Consensus        78 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  153 (260)
T cd05611          78 YLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKF  153 (260)
T ss_pred             ccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccccccC
Confidence            999999999998765 789999999999999999999654   899999999999999999999999999876543211 


Q ss_pred             Cccccc-------Ccccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          218 RRNCEK-------TSEMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       218 ~~~~~~-------~~~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                      ......       ....+  +||||              +....  .    +....... ........+..+.+++.+||
T Consensus       154 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l  232 (260)
T cd05611         154 VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINW-PEEVKEFCSPEAVDLINRLL  232 (260)
T ss_pred             CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCC-CCcccccCCHHHHHHHHHHc
Confidence            111110       11223  99999              11111  1    11111100 11223345688999999999


Q ss_pred             cccCCCCCCCCCCCHHHHHH
Q 046594          269 SCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~vl~  288 (304)
                      +     .||++||++.++.+
T Consensus       233 ~-----~~p~~R~~~~~~~~  247 (260)
T cd05611         233 C-----MDPAKRLGANGYQE  247 (260)
T ss_pred             c-----CCHHHccCCCcHHH
Confidence            9     99999997754443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.96  E-value=2.7e-29  Score=242.45  Aligned_cols=220  Identities=18%  Similarity=0.198  Sum_probs=161.4

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCC---
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDG---  129 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~---  129 (304)
                      .+...|+.++.||+||||.||+++.+   -||+.+|||++.......   .+..|+. |++++|||||+++..|.+.   
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNK---lDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~  552 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNK---LDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE  552 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeec---ccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence            34556888999999999999999987   589999999998775333   5555666 9999999999998544220   


Q ss_pred             --------------------------------------------------------------------------------
Q 046594          130 --------------------------------------------------------------------------------  129 (304)
Q Consensus       130 --------------------------------------------------------------------------------  129 (304)
                                                                                                      
T Consensus       553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~  632 (1351)
T KOG1035|consen  553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN  632 (1351)
T ss_pred             cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence                                                                                            


Q ss_pred             ---------------------------C--------CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 046594          130 ---------------------------L--------QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQM  174 (304)
Q Consensus       130 ---------------------------~--------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~  174 (304)
                                                 +        ..+||=||||+...|.++++++...-.....|++++||++||.|
T Consensus       633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaY  712 (1351)
T KOG1035|consen  633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAY  712 (1351)
T ss_pred             ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence                                       0        12588999999967777776654111578899999999999999


Q ss_pred             HhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC------------------CC-C-Cccccc-----------
Q 046594          175 VCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG------------------GS-N-RRNCEK-----------  223 (304)
Q Consensus       175 Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~------------------~~-~-~~~~~~-----------  223 (304)
                      +|   ++|+|||||||.|||+++++.+||+|||+|+....                  .. . ++..|+           
T Consensus       713 IH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  713 IH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             HH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            95   55899999999999999999999999999987210                  00 0 222333           


Q ss_pred             Cc--ccc--ccccc-----------CCCCc-------ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCC
Q 046594          224 TS--EMA--EDIND-----------FVGGQ-------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHP  281 (304)
Q Consensus       224 ~~--~~s--~DV~S-----------~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rp  281 (304)
                      ..  .++  .|+||           |++.-       .+-+..+..+ ..+.....+.-.++|.++++     .||.+||
T Consensus       790 ~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~-----hdP~kRP  863 (1351)
T KOG1035|consen  790 TSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLS-----HDPSKRP  863 (1351)
T ss_pred             cccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhc-----CCCccCC
Confidence            11  233  89999           33322       2333444211 22334445666789999999     9999999


Q ss_pred             CHHHHHH
Q 046594          282 KIVDVLS  288 (304)
Q Consensus       282 s~~~vl~  288 (304)
                      |+.|+|+
T Consensus       864 tA~eLL~  870 (1351)
T KOG1035|consen  864 TATELLN  870 (1351)
T ss_pred             CHHHHhh
Confidence            9999986

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.96  E-value=1.8e-28  Score=210.00  Aligned_cols=213  Identities=22%  Similarity=0.209  Sum_probs=165.4

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccc--hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      |+..+.+|+|++|.||++...   .++..+++|+......  ...+.+|+. ++.++|+|++++++++...... ++++|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~-~l~~e   77 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHK---RTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDEL-WIVME   77 (253)
T ss_pred             ceeeeeeccCCceEEEEEEEC---CCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE-EEEEe
Confidence            677899999999999998875   3578999999987653  337777888 9999999999999999887444 99999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++++|.+++......+++..+..++.|++.||+|||.   .+++||||+|+||+++.++.++|+|||.+........ 
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  154 (253)
T cd05122          78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKAR  154 (253)
T ss_pred             cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeeccccccccccccc
Confidence            999999999998874579999999999999999999965   5899999999999999999999999999987765431 


Q ss_pred             ---Cccccc-------Ccccc--cccccC-----------CCCcce--------eccccCCCCCCcchH--HHHHHHHHH
Q 046594          218 ---RRNCEK-------TSEMA--EDINDF-----------VGGQEC--------LDQRLYIPNEKFKIT--SLAKLGDIE  264 (304)
Q Consensus       218 ---~~~~~~-------~~~~s--~DV~S~-----------~~~~~~--------~~~~~~~~~~~~~~~--~~~~l~~l~  264 (304)
                         ......       ....+  +||||+           .+....        .....   ....+..  .+..+.+++
T Consensus       155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i  231 (253)
T cd05122         155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG---PPGLRNPEKWSDEFKDFL  231 (253)
T ss_pred             cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcC---CCCcCcccccCHHHHHHH
Confidence               111111       12223  999991           111000        00011   1112222  267899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||+     .||++|||+.++++|
T Consensus       232 ~~~l~-----~~p~~R~t~~~~l~~  251 (253)
T cd05122         232 KKCLQ-----KNPEKRPTAEQLLKH  251 (253)
T ss_pred             HHHcc-----CChhhCCCHHHHhcC
Confidence            99999     999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=9.7e-29  Score=212.36  Aligned_cols=215  Identities=20%  Similarity=0.182  Sum_probs=165.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +|++.+.+|+|++|.+|++...   .+++.+++|........    ..+.+|+. +++++|+|++++++++.+. +..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~   76 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNL---ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-DSLYI   76 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEc---CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-CEEEE
Confidence            5788999999999999998765   35689999999876542    26777778 9999999999999999887 45599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ++||+++++|.+++.... .+++..+..++.|++.||.|||.   .|++||||+|+||+++.++.++|+|||++......
T Consensus        77 v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  152 (254)
T cd06627          77 ILEYAENGSLRQIIKKFG-PFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV  152 (254)
T ss_pred             EEecCCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence            999999999999998765 79999999999999999999965   48999999999999999999999999999876543


Q ss_pred             CC--Cccccc----------Ccccc--ccccc-----------CCCCcc------eeccccCCCCCCcchHHHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND-----------FVGGQE------CLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S-----------~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ..  ....+.          ....+  +|||+           ..+...      ..... ......++...+..+.+++
T Consensus       153 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i  231 (254)
T cd06627         153 SKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGISPELKDFL  231 (254)
T ss_pred             cccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCCCHHHHHHH
Confidence            32  111111          11122  99999           111110      00000 0002334455668899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||.     .+|++|||+.+++.+
T Consensus       232 ~~~l~-----~~p~~R~~~~~~l~~  251 (254)
T cd06627         232 MQCFQ-----KDPNLRPTAKQLLKH  251 (254)
T ss_pred             HHHHh-----CChhhCcCHHHHhcC
Confidence            99999     999999999999864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.96  E-value=1.7e-28  Score=219.78  Aligned_cols=137  Identities=18%  Similarity=0.097  Sum_probs=116.1

Q ss_pred             cccCCc--cccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           66 KSFGDS--VEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        66 ~~lg~g--~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      ..||+|  +||.||.+.+.   ..|+.||+|........    ..+++|+. ++.++||||+++++++..++. +++|+|
T Consensus         4 ~~ig~g~~~~~~v~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~-~~~v~e   79 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHT---PTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSW-LWVISP   79 (328)
T ss_pred             HHhCCcccCceeEEEEEEc---CCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCc-eEEEEe
Confidence            456666  88999999875   35799999998754322    26677777 888999999999999988754 499999


Q ss_pred             ecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          139 FMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      |+.+++|.+++..... .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.++++||+.+
T Consensus        80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~  148 (328)
T cd08226          80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHL  148 (328)
T ss_pred             cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHH
Confidence            9999999999887532 68999999999999999999965   48999999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.96  E-value=5.9e-29  Score=218.39  Aligned_cols=221  Identities=15%  Similarity=0.094  Sum_probs=163.1

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch------hHHHHHHH-hhCC-CCCcccceeeeeeCCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ------TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~  132 (304)
                      .|++.+.||+|++|.||++...+...++..+|||.+......      ..+.+|+. +.++ +||||+++++.+..+. .
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~-~   79 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT-K   79 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC-E
Confidence            378889999999999999887665567889999998743211      15666777 8888 6999999999987774 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+.+.... .+++..+..++.|+++||+|||.   .+++||||+|+||+++.++.++|+|||+++..
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583          80 LHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             EEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence            599999999999999987655 78999999999999999999975   48999999999999999999999999998765


Q ss_pred             CCCCC---Cccccc----------Cc--ccc--cccccC-----------CCCc--------ceeccccCCCCCCcchHH
Q 046594          213 SGGSN---RRNCEK----------TS--EMA--EDINDF-----------VGGQ--------ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       213 ~~~~~---~~~~~~----------~~--~~s--~DV~S~-----------~~~~--------~~~~~~~~~~~~~~~~~~  256 (304)
                      .....   ....+.          ..  ..+  +||||+           .+..        ..+...........+...
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd05583         156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTM  235 (288)
T ss_pred             ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCccc
Confidence            43322   001111          11  122  899991           1110        000000000012333445


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      ...+.+++.+||+     .||++|||+.++.+.|+
T Consensus       236 ~~~l~~li~~~l~-----~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         236 SAEARDFIQKLLE-----KDPKKRLGANGADEIKN  265 (288)
T ss_pred             CHHHHHHHHHHhc-----CCHhhccCcchHHHHhc
Confidence            6778999999999     99999999877765554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.9e-28  Score=234.95  Aligned_cols=220  Identities=23%  Similarity=0.286  Sum_probs=174.5

Q ss_pred             ccccccCCccccceeeecceeecCC----CcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCCce
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRN----LTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~----~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~  133 (304)
                      ++.+.+|+|.||.|+++..++....    ...||||.++......   .+..|.. |+.+ .|+||+.++|+|... +.+
T Consensus       299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~-~~~  377 (609)
T KOG0200|consen  299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD-GPL  377 (609)
T ss_pred             cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC-Cce
Confidence            4566999999999999887655433    4689999998665443   6777777 7777 699999999999995 555


Q ss_pred             EEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC
Q 046594          134 CLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL  198 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~  198 (304)
                      ++|+||++.|+|.++++..+               ..+...+.+.++.|||.||+||   .+++++||||..+|||++.+
T Consensus       378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L---~~~~~vHRDLAaRNVLi~~~  454 (609)
T KOG0200|consen  378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYL---ASVPCVHRDLAARNVLITKN  454 (609)
T ss_pred             EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHH---hhCCccchhhhhhhEEecCC
Confidence            99999999999999999876               2389999999999999999999   55579999999999999999


Q ss_pred             CCeeEcccccccccCCCCC---Ccccc----c--------Ccccc--ccccc---------------CCC---Ccce---
Q 046594          199 CNAKLAGFGAANYCSGGSN---RRNCE----K--------TSEMA--EDIND---------------FVG---GQEC---  240 (304)
Q Consensus       199 ~~~kl~Dfgla~~~~~~~~---~~~~~----~--------~~~~s--~DV~S---------------~~~---~~~~---  240 (304)
                      ..+||+|||+|+.......   ....+    .        ...++  +||||               +++   ..++   
T Consensus       455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~  534 (609)
T KOG0200|consen  455 KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEF  534 (609)
T ss_pred             CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHH
Confidence            9999999999996554433   11111    1        33444  99999               222   1122   


Q ss_pred             eccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          241 LDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      +....   +.+.|..|..++.++|+.||+     .+|++||++.++.+.++...
T Consensus       535 l~~G~---r~~~P~~c~~eiY~iM~~CW~-----~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  535 LKEGN---RMEQPEHCSDEIYDLMKSCWN-----ADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             HhcCC---CCCCCCCCCHHHHHHHHHHhC-----CCcccCCCHHHHHHHHHHHH
Confidence            12222   446778889999999999999     99999999999999999853

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.96  E-value=7.2e-29  Score=218.06  Aligned_cols=218  Identities=16%  Similarity=0.107  Sum_probs=163.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch------hHHHHHHH-hhCC-CCCcccceeeeeeCCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ------TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~  132 (304)
                      .|++.+.+|+|+||.||.+.......+|..+|+|++......      ..+..|+. ++++ +|+||+++++++..+ ..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~   79 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD-TK   79 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC-Ce
Confidence            378899999999999999887654457899999998753221      25666777 8888 689999999998877 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++|+||+++++|.+++.... .+++..+..++.|++.||+|||+   .+++||||+|+|||++.++.++|+|||++...
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  155 (290)
T cd05613          80 LHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  155 (290)
T ss_pred             EEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence            599999999999999998765 78999999999999999999965   48999999999999999999999999999766


Q ss_pred             CCCCC---Cccccc------------Ccccc--cccccC-----------CCCc---------ceeccccCCCCCCcchH
Q 046594          213 SGGSN---RRNCEK------------TSEMA--EDINDF-----------VGGQ---------ECLDQRLYIPNEKFKIT  255 (304)
Q Consensus       213 ~~~~~---~~~~~~------------~~~~s--~DV~S~-----------~~~~---------~~~~~~~~~~~~~~~~~  255 (304)
                      .....   ....+.            ....+  +||||+           .+..         ++.+... .....++..
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~  234 (290)
T cd05613         156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL-KSEPPYPQE  234 (290)
T ss_pred             ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh-ccCCCCCcc
Confidence            43221   011111            11122  899991           1110         1111111 012234455


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          256 SLAKLGDIEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       256 ~~~~l~~l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      ....+.+++.+||+     .||++||     ++.+++++
T Consensus       235 ~~~~~~~ll~~~l~-----~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         235 MSALAKDIIQRLLM-----KDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             CCHHHHHHHHHHhc-----CCHHHhcCCCCCCHHHHHcC
Confidence            66789999999999     9999997     77888765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.96  E-value=7e-29  Score=218.47  Aligned_cols=146  Identities=22%  Similarity=0.270  Sum_probs=121.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCC-CCCcccceeeeeeCCCC---
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ---  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~---  131 (304)
                      +|++.+.||+|+||.||++.+.   .+++.||+|........    ..+.+|+. ++.+ +||||+++++++...+.   
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~---~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~   78 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDK---NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK   78 (295)
T ss_pred             CceEeeEecccCCeEEEEEEEC---CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence            6889999999999999999876   35789999998754322    25566666 8888 46999999999876543   


Q ss_pred             -ceEEEEeecCCCChhhHhhhcC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEcc
Q 046594          132 -RRCLVFEFMQRGSLRWNLREKG----GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAG  205 (304)
Q Consensus       132 -~~~lv~e~~~~gsL~~~l~~~~----~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~D  205 (304)
                       ..|++|||+++ +|.+++....    ..+++..++.++.|++.||+|||..   +++||||||+||+++. ++.++|+|
T Consensus        79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d  154 (295)
T cd07837          79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD  154 (295)
T ss_pred             ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence             25999999986 8988876532    2689999999999999999999654   8999999999999998 88999999


Q ss_pred             cccccccC
Q 046594          206 FGAANYCS  213 (304)
Q Consensus       206 fgla~~~~  213 (304)
                      ||++....
T Consensus       155 fg~~~~~~  162 (295)
T cd07837         155 LGLGRAFS  162 (295)
T ss_pred             cccceecC
Confidence            99987653

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.96  E-value=3.1e-28  Score=216.11  Aligned_cols=219  Identities=19%  Similarity=0.142  Sum_probs=161.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--h---hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--Q---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|...+.+|+|+||.||++..+   .++..+++|.+.....  .   ..+.+|+. ++.++|+|++++.+++...... 
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-   90 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDV---RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA-   90 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEc---CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCee-
Confidence            45778899999999999999876   3578999999864321  1   15566777 9999999999999999887554 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++|+||+. |+|.+.+.....++++..+..++.|++.||.|||+.   +++||||+|+||+++.++.++|+|||++....
T Consensus        91 ~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  166 (308)
T cd06634          91 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (308)
T ss_pred             EEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence            99999996 588888766555789999999999999999999754   89999999999999999999999999987654


Q ss_pred             CCCC-Cccccc----------Ccccc--cccccC-----------CCCcc-----eeccccCCC-CCCcchHHHHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDINDF-----------VGGQE-----CLDQRLYIP-NEKFKITSLAKLGDI  263 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S~-----------~~~~~-----~~~~~~~~~-~~~~~~~~~~~l~~l  263 (304)
                      .... .....+          ....+  +||||+           .+...     ......... ....+...+..+.++
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (308)
T cd06634         167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF  246 (308)
T ss_pred             CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHH
Confidence            4322 111111          11223  899991           11100     000000000 111123456778999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      +.+||.     .+|++||++.+++++--
T Consensus       247 i~~cl~-----~~P~~Rp~~~~ll~~~~  269 (308)
T cd06634         247 VDSCLQ-----KIPQDRPTSEVLLKHRF  269 (308)
T ss_pred             HHHHhh-----CCcccCCCHHHHhhCcc
Confidence            999999     99999999999998743

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.96  E-value=1.9e-28  Score=214.38  Aligned_cols=210  Identities=13%  Similarity=0.064  Sum_probs=153.7

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccch----h-HHHHHH---H-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----T-KLEEEI---L-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~-~~~~e~---~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .||+|+||.||++.+.   ..++.||+|.+......    . .+.++.   . ++...||||+++++++...+ .+++||
T Consensus         1 ~ig~g~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~v~   76 (278)
T cd05606           1 IIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-KLSFIL   76 (278)
T ss_pred             CcccCCCeEEEEEEEe---cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-EEEEEE
Confidence            3799999999998875   34789999998754221    1 222222   2 44468999999999988874 459999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++........
T Consensus        77 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~  152 (278)
T cd05606          77 DLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  152 (278)
T ss_pred             ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC
Confidence            9999999999887655 799999999999999999999764   899999999999999999999999999876543222


Q ss_pred             Cccccc----------Cc-ccc--ccccc--------------CCCCc----ceeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          218 RRNCEK----------TS-EMA--EDIND--------------FVGGQ----ECLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       218 ~~~~~~----------~~-~~s--~DV~S--------------~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                      ....++          .+ .++  +||||              |....    ...+.........++...+..+.+++.+
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  232 (278)
T cd05606         153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG  232 (278)
T ss_pred             cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHH
Confidence            111111          11 233  89999              11110    0011111001233444567889999999


Q ss_pred             hccccCCCCCCCCCC-----CHHHHHHH
Q 046594          267 CISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       267 cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      |+.     .+|.+||     ++.+++++
T Consensus       233 ~l~-----~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         233 LLQ-----RDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             Hhh-----cCHHhccCCCCCCHHHHHhC
Confidence            999     9999999     99999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.96  E-value=1.9e-28  Score=217.04  Aligned_cols=148  Identities=22%  Similarity=0.224  Sum_probs=124.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~---  130 (304)
                      ..+|++.+.+|+|+||.||++....   +++.+|+|.+.......    .+.+|+. +++++||||+++++++...+   
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKK---TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPY   87 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECC---CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence            5689999999999999999998763   57899999986543222    3445666 99999999999999876542   


Q ss_pred             ----CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          131 ----QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       131 ----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                          ...++||||+++ +|.+.+......+++.+++.++.|++.||+|||+.   +++|+||||+||+++.++.+||+||
T Consensus        88 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df  163 (310)
T cd07865          88 NRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF  163 (310)
T ss_pred             cCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence                235999999965 89888877655789999999999999999999764   8999999999999999999999999


Q ss_pred             ccccccC
Q 046594          207 GAANYCS  213 (304)
Q Consensus       207 gla~~~~  213 (304)
                      |++....
T Consensus       164 g~~~~~~  170 (310)
T cd07865         164 GLARAFS  170 (310)
T ss_pred             CCccccc
Confidence            9997653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.96  E-value=5.5e-29  Score=223.59  Aligned_cols=146  Identities=22%  Similarity=0.269  Sum_probs=122.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCC----
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGL----  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~----  130 (304)
                      .++|++.+.||+|+||.||++.+.   .+|+.||+|.+.......   .+.+|+. +++++|+||+++++++....    
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   80 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHK---PTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF   80 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEc---CCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence            468999999999999999999876   357899999986432222   5566777 99999999999999875442    


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ..+++++||+++ +|.+.+...  .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++.
T Consensus        81 ~~~~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~  154 (336)
T cd07849          81 NDVYIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR  154 (336)
T ss_pred             ceEEEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence            346999999975 888887654  699999999999999999999764   89999999999999999999999999987


Q ss_pred             ccC
Q 046594          211 YCS  213 (304)
Q Consensus       211 ~~~  213 (304)
                      ...
T Consensus       155 ~~~  157 (336)
T cd07849         155 IAD  157 (336)
T ss_pred             ecc
Confidence            654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-29  Score=243.12  Aligned_cols=213  Identities=20%  Similarity=0.145  Sum_probs=173.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..|.+++.||+|+||.|.+++.+.+   ++.+|.|+++....-     ..|+||.. |..-+.+-|++++-.|.+. .++
T Consensus        75 ~DfeilKvIGrGaFGEV~lVr~k~t---~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~-~~L  150 (1317)
T KOG0612|consen   75 EDFEILKVIGRGAFGEVALVRHKST---EKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE-RYL  150 (1317)
T ss_pred             HhhHHHHHhcccccceeEEEEeecc---ccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc-cce
Confidence            3578899999999999999999865   689999999873221     28999999 8888999999999999888 666


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+|||||+||+|-.+|.... ++++..+..|+..|.-||.-||+.   |+|||||||+|||+|..|++||+|||.+..+.
T Consensus       151 YlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  151 YLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD  226 (1317)
T ss_pred             EEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcC
Confidence            99999999999999999988 899999999999999998888665   89999999999999999999999999988776


Q ss_pred             CCCC---CcccccC---------------cccc--ccccc---------CCCCc-----------ceeccccCCCCCCcc
Q 046594          214 GGSN---RRNCEKT---------------SEMA--EDIND---------FVGGQ-----------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       214 ~~~~---~~~~~~~---------------~~~s--~DV~S---------~~~~~-----------~~~~~~~~~~~~~~~  253 (304)
                      ....   ....|++               +.|.  +|.||         ++...           .+++..-   .-.||
T Consensus       227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~---~l~FP  303 (1317)
T KOG0612|consen  227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKE---SLSFP  303 (1317)
T ss_pred             CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhh---hcCCC
Confidence            5444   4445552               3333  89999         11111           5665532   23455


Q ss_pred             --hHHHHHHHHHHHHhccccCCCCCCCCCCC---HHHHHHH
Q 046594          254 --ITSLAKLGDIEKWCISCCSNIEGNENHPK---IVDVLSG  289 (304)
Q Consensus       254 --~~~~~~l~~l~~~cl~~~~~~~dp~~Rps---~~~vl~~  289 (304)
                        .+.+..+.+||.+.+.      +|+.|-.   +.++.+|
T Consensus       304 ~~~~VSeeakdLI~~ll~------~~e~RLgrngiedik~H  338 (1317)
T KOG0612|consen  304 DETDVSEEAKDLIEALLC------DREVRLGRNGIEDIKNH  338 (1317)
T ss_pred             cccccCHHHHHHHHHHhc------ChhhhcccccHHHHHhC
Confidence              4578899999999988      8889887   8888876

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.7e-29  Score=236.74  Aligned_cols=150  Identities=20%  Similarity=0.166  Sum_probs=114.9

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEE------------------EEEEeccccc-hhHHHHHHH-hhCCCCC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVV------------------AVKARRYMAS-QTKLEEEIL-LKSSSHL  117 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v------------------avK~~~~~~~-~~~~~~e~~-l~~l~h~  117 (304)
                      +..+|++.+.||+|+||.||++..+..  .+...                  +.|....... ...+.+|+. +++++||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp  223 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRAS--TEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE  223 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEecc--chhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence            457999999999999999999865432  11111                  1222222111 126677888 9999999


Q ss_pred             cccceeeeeeCCCCceEEEEeecCCCChhhHhhhcC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCe
Q 046594          118 NIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKG----GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNI  193 (304)
Q Consensus       118 niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Ni  193 (304)
                      ||+++++++...+.. |+++|++.+ +|.+++....    .......+..++.|++.||+|||+.   +|+||||||+||
T Consensus       224 nIv~l~~~~~~~~~~-~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NI  298 (501)
T PHA03210        224 NILKIEEILRSEANT-YMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENI  298 (501)
T ss_pred             CcCcEeEEEEECCee-EEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence            999999999888555 999999954 7877765432    1334567788999999999999754   899999999999


Q ss_pred             eeCCCCCeeEcccccccccCC
Q 046594          194 LLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       194 ll~~~~~~kl~Dfgla~~~~~  214 (304)
                      |++.++.+||+|||+++.+..
T Consensus       299 Ll~~~~~vkL~DFGla~~~~~  319 (501)
T PHA03210        299 FLNCDGKIVLGDFGTAMPFEK  319 (501)
T ss_pred             EECCCCCEEEEeCCCceecCc
Confidence            999999999999999987654

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-29  Score=210.12  Aligned_cols=217  Identities=17%  Similarity=0.177  Sum_probs=163.7

Q ss_pred             Hhhccc-cccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCC---CCceE
Q 046594           60 KRRRML-KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDG---LQRRC  134 (304)
Q Consensus        60 ~~~~~~-~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~---~~~~~  134 (304)
                      ..|++. +.||-|-.|.|..+.++.   .++.+|+|++.....  ..+|... +..-.|||||.++++|.+.   ...+.
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~---T~ekfALKvL~Ds~K--ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL  135 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKR---TQEKFALKVLLDSPK--ARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL  135 (400)
T ss_pred             hhheehhhhhccccCCceEEEEecc---chhhhHHHHHhcCHH--HHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence            344443 578999999999999884   478999999875432  2233333 6677999999999998653   23468


Q ss_pred             EEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGAAN  210 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfgla~  210 (304)
                      +|||+|+||.|.+.+..++. .+++.++..|+.||+.|+.|||..   +|.||||||+|+|.+.   |..+||+|||+|+
T Consensus       136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK  212 (400)
T KOG0604|consen  136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK  212 (400)
T ss_pred             eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccccc
Confidence            99999999999999998865 799999999999999999999765   7999999999999974   5579999999999


Q ss_pred             ccCCCCC-CcccccCcccc------------ccccc-----------CCCCc----ceecccc----CCCCCCcc----h
Q 046594          211 YCSGGSN-RRNCEKTSEMA------------EDIND-----------FVGGQ----ECLDQRL----YIPNEKFK----I  254 (304)
Q Consensus       211 ~~~~~~~-~~~~~~~~~~s------------~DV~S-----------~~~~~----~~~~~~~----~~~~~~~~----~  254 (304)
                      ....... .+.+.++.|.+            +|+||           +|+.-    ..+.+.+    ....-+||    .
T Consensus       213 ~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs  292 (400)
T KOG0604|consen  213 ETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWS  292 (400)
T ss_pred             ccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHh
Confidence            8875444 44444432222            89999           33322    1122211    11122344    3


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..++...++|+..|.     .+|.+|.|+.++++|
T Consensus       293 ~VSe~aKdlIR~LLk-----t~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  293 CVSEAAKDLIRKLLK-----TEPTERLTIEEVMDH  322 (400)
T ss_pred             HHHHHHHHHHHHHhc-----CCchhheeHHHhhcC
Confidence            456778999999999     999999999999875

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.96  E-value=1.6e-28  Score=214.97  Aligned_cols=144  Identities=25%  Similarity=0.292  Sum_probs=123.1

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      |++.+.+|.|++|.||++.++   .+|..+|+|++......    ..+..|+. ++.++|||++++++++.++ ...+++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-~~~~iv   76 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDK---LTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-NKLYLV   76 (283)
T ss_pred             CchheEecCCCCeEEEEEEEc---CCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC-CeEEEE
Confidence            678899999999999999875   35799999998754322    25666777 9999999999999999887 445999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |||++ ++|.+++.... ..+++..++.++.|+++||+|||+.   +++||||+|+||+++.++.++|+|||++....
T Consensus        77 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~  150 (283)
T cd07835          77 FEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFG  150 (283)
T ss_pred             EeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence            99995 59999887654 2689999999999999999999764   89999999999999999999999999987653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.96  E-value=3.5e-28  Score=213.24  Aligned_cols=216  Identities=22%  Similarity=0.222  Sum_probs=164.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..|+..+.+|+|++|.||.+.+.   .++..+++|.+..... ...+.+|+. ++.++|+|++++++++...+ ..++++
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~   94 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDR---ATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGD-ELWVVM   94 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEc---cCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECC-EEEEEE
Confidence            45788889999999999998876   3578999999987654 336667777 99999999999999998884 459999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++++|.+++......+++..+..++.|++.||+|||.   .|++|+||+|+||+++.++.++|+|||++........
T Consensus        95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  171 (286)
T cd06614          95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS  171 (286)
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence            9999999999998875579999999999999999999965   5899999999999999999999999998765433211


Q ss_pred             -----Cccccc-------Ccccc--cccccC-----------CC---Cc------ceeccccCCCCCCcchHHHHHHHHH
Q 046594          218 -----RRNCEK-------TSEMA--EDINDF-----------VG---GQ------ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       218 -----~~~~~~-------~~~~s--~DV~S~-----------~~---~~------~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                           .....+       ....+  +||||+           .+   ..      .+.....  +....+...+..+.++
T Consensus       172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l  249 (286)
T cd06614         172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI--PPLKNPEKWSPEFKDF  249 (286)
T ss_pred             hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CCCcchhhCCHHHHHH
Confidence                 000000       11222  999991           11   11      0001111  0111222356789999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||+     .+|.+|||+.+++++
T Consensus       250 i~~~l~-----~~p~~Rpt~~~il~~  270 (286)
T cd06614         250 LNKCLV-----KDPEKRPSAEELLQH  270 (286)
T ss_pred             HHHHhc-----cChhhCcCHHHHhhC
Confidence            999999     999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.96  E-value=8.7e-29  Score=215.80  Aligned_cols=215  Identities=18%  Similarity=0.127  Sum_probs=164.3

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCC-CCcccceeeeeeCCCCce
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~  133 (304)
                      +|++.+.||.|+||.||++..+.   +++.+++|+......     ...+.+|.. +++++ |+||+++++++...+ .+
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-~~   77 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKE---TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE-NL   77 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcC---CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc-eE
Confidence            68899999999999999998763   579999999875321     125566666 88888 999999999988774 44


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +++|||+++++|.+++...+ .+++..++.++.|++.||+|||+.   +++|+||+|+||+++.++.++|+|||++....
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          78 YFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence            99999999999999998876 799999999999999999999764   89999999999999999999999999988664


Q ss_pred             CCCCC----------------------ccccc----------Ccccc--ccccc-----------CCCCc-----ceecc
Q 046594          214 GGSNR----------------------RNCEK----------TSEMA--EDIND-----------FVGGQ-----ECLDQ  243 (304)
Q Consensus       214 ~~~~~----------------------~~~~~----------~~~~s--~DV~S-----------~~~~~-----~~~~~  243 (304)
                      .....                      ...+.          ....+  +||||           ..+..     .....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  233 (280)
T cd05581         154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQK  233 (280)
T ss_pred             CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence            43210                      00011          12223  99999           11111     00000


Q ss_pred             ccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCH----HHHHHH
Q 046594          244 RLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKI----VDVLSG  289 (304)
Q Consensus       244 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~----~~vl~~  289 (304)
                      .. .....++...+..+.+++.+||+     .||.+|||+    .++++|
T Consensus       234 ~~-~~~~~~~~~~~~~~~~li~~~l~-----~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         234 IL-KLEYSFPPNFPPDAKDLIEKLLV-----LDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             HH-hcCCCCCCccCHHHHHHHHHHhc-----CCHhhCCCcccCHHHHhcC
Confidence            00 00234455567889999999999     999999999    887764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.96  E-value=3.5e-28  Score=214.43  Aligned_cols=219  Identities=19%  Similarity=0.234  Sum_probs=158.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHH-HhhCC-CCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEI-LLKSS-SHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~-~l~~l-~h~niv~~~~~~~~~~~~~  133 (304)
                      ...|++.+.+|+|++|.||++.+..   .++.+|||.++......   .+.++. .+.+. .|+||+++++++...... 
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~-   89 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKK---TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDV-   89 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECC---CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeE-
Confidence            4578999999999999999998763   36899999997543222   333343 34444 699999999999887544 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +++|||+++ +|.+++......+++..+..++.|++.||+|||+.  .+++||||+|+||+++.++.++|+|||++....
T Consensus        90 ~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618          90 FICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLV  166 (296)
T ss_pred             EEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence            999999955 88887776555899999999999999999999753  379999999999999999999999999987654


Q ss_pred             CCCC-Cccccc----------C----cccc--ccccc--------------CCCCc---ceeccccCCCCCCcc--hHHH
Q 046594          214 GGSN-RRNCEK----------T----SEMA--EDIND--------------FVGGQ---ECLDQRLYIPNEKFK--ITSL  257 (304)
Q Consensus       214 ~~~~-~~~~~~----------~----~~~s--~DV~S--------------~~~~~---~~~~~~~~~~~~~~~--~~~~  257 (304)
                      .... ....+.          .    +.++  +||||              +...+   +.....+.......+  ...+
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (296)
T cd06618         167 DSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFS  246 (296)
T ss_pred             CCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCC
Confidence            3222 111110          1    1133  89999              11110   111110100001111  2356


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .++.+++.+||.     .||.+||++.+++++
T Consensus       247 ~~l~~li~~~l~-----~~p~~Rp~~~~il~~  273 (296)
T cd06618         247 PDFCSFVDLCLT-----KDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHHHHHcc-----CChhhCCCHHHHhcC
Confidence            789999999999     999999999999876

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.96  E-value=6.7e-28  Score=214.49  Aligned_cols=214  Identities=20%  Similarity=0.180  Sum_probs=159.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--h---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--T---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..|...+.+|+|+||.||++...   ..+..+++|.+......  .   .+.+|.. ++.++|||++++++++.+.... 
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~~~---~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-   96 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFATNS---HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTA-   96 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEEEC---CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE-
Confidence            34677788999999999999764   35789999998753321  1   5566777 9999999999999999888555 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+. |+|.+.+.....++++.++..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||++....
T Consensus        97 ~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~  172 (313)
T cd06633          97 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSS  172 (313)
T ss_pred             EEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccC
Confidence            99999996 488888876655899999999999999999999754   89999999999999999999999999986543


Q ss_pred             CCCC-Cccccc----------Ccccc--cccccC-----------CCC---c--c----eeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDINDF-----------VGG---Q--E----CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S~-----------~~~---~--~----~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... .....+          .+..+  +||||+           .+.   +  .    ......   ........+..+
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l  249 (313)
T cd06633         173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS---PTLQSNEWTDSF  249 (313)
T ss_pred             CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC---CCCCccccCHHH
Confidence            3221 111100          12223  899991           111   1  0    000011   111122344678


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+++.+||+     .+|.+||++.+++++
T Consensus       250 ~~li~~~l~-----~~P~~Rp~~~~~l~~  273 (313)
T cd06633         250 RGFVDYCLQ-----KIPQERPASAELLRH  273 (313)
T ss_pred             HHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            999999999     999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.96  E-value=2.2e-28  Score=215.43  Aligned_cols=146  Identities=23%  Similarity=0.272  Sum_probs=121.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++.+.||+|++|.||++.++   .+++.+|+|.+......    ..+.+|+. ++.++||||+++++++...+ ..+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~   77 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDR---VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-RLY   77 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEec---CCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC-eEE
Confidence            47899999999999999999875   35789999998654322    25666777 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~  212 (304)
                      +||||+++ +|.+.+..... .+++..+..++.|++.||+|||+   ++++||||+|+||+++. ++.+||+|||++...
T Consensus        78 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009         78 LVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             EEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence            99999965 88888765443 46888999999999999999965   48999999999999985 557999999999765


Q ss_pred             C
Q 046594          213 S  213 (304)
Q Consensus       213 ~  213 (304)
                      .
T Consensus       154 ~  154 (294)
T PLN00009        154 G  154 (294)
T ss_pred             C
Confidence            3

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.96  E-value=1.6e-28  Score=212.09  Aligned_cols=207  Identities=17%  Similarity=0.127  Sum_probs=153.4

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +|.|+||.||++.+.   .+|+.+++|.+......     ..+.+|+. +++++||||+++++.+... ...|+++||++
T Consensus         1 lg~g~~~~vy~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~lv~e~~~   76 (265)
T cd05579           1 ISKGAYGRVFLAKKK---STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK-KNLYLVMEYLP   76 (265)
T ss_pred             CCCCCceEEEEEEEC---CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC-cEEEEEEecCC
Confidence            689999999999875   34789999998754331     16667777 9999999999999998876 44599999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC----
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN----  217 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----  217 (304)
                      +++|.+++...+ .+++..+..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||++........    
T Consensus        77 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  152 (265)
T cd05579          77 GGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN  152 (265)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence            999999998766 799999999999999999999754   899999999999999999999999999875533210    


Q ss_pred             ------Cccccc----------Cccc--ccccccC-----------CCC---c--ceeccccCCCCCCcchHH--HHHHH
Q 046594          218 ------RRNCEK----------TSEM--AEDINDF-----------VGG---Q--ECLDQRLYIPNEKFKITS--LAKLG  261 (304)
Q Consensus       218 ------~~~~~~----------~~~~--s~DV~S~-----------~~~---~--~~~~~~~~~~~~~~~~~~--~~~l~  261 (304)
                            ....+.          ....  .+||||+           .+.   .  +..+... ......+...  +..+.
T Consensus       153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  231 (265)
T cd05579         153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNIL-NGKIEWPEDVEVSDEAI  231 (265)
T ss_pred             cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCcCCCccccCCHHHH
Confidence                  000011          1112  2899991           111   0  1111110 0011223333  68899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      +++.+||+     .+|++|||+.++.+
T Consensus       232 ~~i~~~l~-----~~p~~Rpt~~~~~~  253 (265)
T cd05579         232 DLISKLLV-----PDPEKRLGAKSIEE  253 (265)
T ss_pred             HHHHHHhc-----CCHhhcCCCccHHH
Confidence            99999999     99999999944433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.96  E-value=4.1e-28  Score=214.29  Aligned_cols=150  Identities=24%  Similarity=0.251  Sum_probs=126.4

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCC--
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGL--  130 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~--  130 (304)
                      ...+|++.+.+|+|+||.||++..+   .+++.+|+|.++......    .+..|+. ++.++|||++++++++.+..  
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~   81 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDK---DTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA   81 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEEC---CCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence            3568999999999999999999876   357899999997543222    5556676 99999999999999987653  


Q ss_pred             -------CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          131 -------QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       131 -------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                             ..+++++||+++ +|.+.+......+++..+..++.|++.||+|||+.   +++||||||+||+++.++.+||
T Consensus        82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864          82 LDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             hhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEe
Confidence                   356999999986 78777776544799999999999999999999664   8999999999999999999999


Q ss_pred             cccccccccCC
Q 046594          204 AGFGAANYCSG  214 (304)
Q Consensus       204 ~Dfgla~~~~~  214 (304)
                      +|||++.....
T Consensus       158 ~dfg~~~~~~~  168 (302)
T cd07864         158 ADFGLARLYNS  168 (302)
T ss_pred             CcccccccccC
Confidence            99999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.96  E-value=2.1e-28  Score=217.36  Aligned_cols=149  Identities=15%  Similarity=0.142  Sum_probs=122.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEecccc-----chhHHHHHHH-hhCCCCCcccceeeeeeCCC-Cce
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA-----SQTKLEEEIL-LKSSSHLNIVTLLGYPQDGL-QRR  133 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~~  133 (304)
                      +|++.+.+|+|++|.||++..+.. ..+..+|+|.+....     ....+.+|+. +++++||||+++++++.+.. ..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~-~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNG-KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSV   79 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCC-CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceE
Confidence            588999999999999999988642 157899999998733     1225556666 99999999999999998762 346


Q ss_pred             EEEEeecCCCChhhHhhhcC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC----CCCeeEcc
Q 046594          134 CLVFEFMQRGSLRWNLREKG----GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE----LCNAKLAG  205 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~----~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~----~~~~kl~D  205 (304)
                      ++||||+++ +|.+.+....    ..+++..++.++.|++.||+|||+.   +++||||||+||+++.    ++.+||+|
T Consensus        80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~D  155 (316)
T cd07842          80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGD  155 (316)
T ss_pred             EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECC
Confidence            999999976 7777664321    2689999999999999999999654   8999999999999999    89999999


Q ss_pred             cccccccCC
Q 046594          206 FGAANYCSG  214 (304)
Q Consensus       206 fgla~~~~~  214 (304)
                      ||++.....
T Consensus       156 fg~~~~~~~  164 (316)
T cd07842         156 LGLARLFNA  164 (316)
T ss_pred             CccccccCC
Confidence            999886543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.6e-28  Score=209.09  Aligned_cols=216  Identities=22%  Similarity=0.174  Sum_probs=162.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEecccc-----ch--hHHHHHHH-hhCCCCCcccceeeeeeCCC-C
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA-----SQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGL-Q  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~-----~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~-~  131 (304)
                      +|++.+.+|+|+||.||++.++   .++..+|+|.+....     ..  ..+..|+. +++++|+||+++++++.+.. .
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   79 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDA---DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEK   79 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEc---CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCC
Confidence            5889999999999999999876   357899999875321     11  16677777 99999999999999987653 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+++++||+++++|.+++.... .+++.....++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+++.
T Consensus        80 ~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          80 KLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence            4689999999999999998765 689999999999999999999654   899999999999999999999999999976


Q ss_pred             cCCCCC-----Cccccc----------Ccccc--ccccc-----------CCCCc------ceeccccCCCCCCcchHHH
Q 046594          212 CSGGSN-----RRNCEK----------TSEMA--EDIND-----------FVGGQ------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       212 ~~~~~~-----~~~~~~----------~~~~s--~DV~S-----------~~~~~------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ......     ....++          ....+  +||||           .++..      .+...........++....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~  235 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVS  235 (264)
T ss_pred             cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccC
Confidence            532111     001111          11122  89999           11111      1111111001344566777


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+++.+||.     . |..||++.++++|
T Consensus       236 ~~~~~~i~~~l~-----~-~~~r~~~~~~~~~  261 (264)
T cd06653         236 DACRDFLKQIFV-----E-EKRRPTAEFLLRH  261 (264)
T ss_pred             HHHHHHHHHHhc-----C-cccCccHHHHhcC
Confidence            889999999999     5 6999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.96  E-value=4.5e-28  Score=213.57  Aligned_cols=213  Identities=19%  Similarity=0.194  Sum_probs=158.2

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      |.....+|+|+||.||++..+   .++..+|+|++.......  .+.+|+. ++.++|+|++++++++...+. .+++||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~lv~e   97 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVK---SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE-LWVVME   97 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEc---CCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCE-EEEEEe
Confidence            334567899999999998775   357899999986543322  6677777 999999999999999988744 499999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++++|.+++...  .+++.....++.|++.||+|||+.   |++||||+|+||+++.++.++|+|||++........ 
T Consensus        98 ~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~  172 (292)
T cd06657          98 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  172 (292)
T ss_pred             cCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccc
Confidence            99999999987543  589999999999999999999764   899999999999999999999999998876543221 


Q ss_pred             -Cccccc----------Ccccc--cccccC-----------CC---Cc-----ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          218 -RRNCEK----------TSEMA--EDINDF-----------VG---GQ-----ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       218 -~~~~~~----------~~~~s--~DV~S~-----------~~---~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                       ....++          ....+  +||||+           .+   ..     ..+...+.. ........+..+.+++.
T Consensus       173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~  251 (292)
T cd06657         173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSPSLKGFLD  251 (292)
T ss_pred             ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc-ccCCcccCCHHHHHHHH
Confidence             111111          11222  899991           11   11     011111100 00111234567889999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +||+     .||.+||++.++++|
T Consensus       252 ~~l~-----~~P~~R~~~~~ll~~  270 (292)
T cd06657         252 RLLV-----RDPAQRATAAELLKH  270 (292)
T ss_pred             HHHh-----CCcccCcCHHHHhcC
Confidence            9999     999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.96  E-value=2.5e-28  Score=219.13  Aligned_cols=147  Identities=20%  Similarity=0.265  Sum_probs=124.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCC---C
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDG---L  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~---~  130 (304)
                      -.+|++.+.||+|++|.||++..+   .+++.||+|++......    ..+..|+. ++.++||||+++++++...   .
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   80 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDT---RSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADF   80 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEc---CCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCC
Confidence            368999999999999999999876   34789999998754321    14556667 9999999999999987543   2


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ..+++|+||+. |+|.+++.... .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.
T Consensus        81 ~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~  155 (334)
T cd07855          81 KDVYVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR  155 (334)
T ss_pred             ceEEEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence            45699999996 59999987665 699999999999999999999764   89999999999999999999999999987


Q ss_pred             ccC
Q 046594          211 YCS  213 (304)
Q Consensus       211 ~~~  213 (304)
                      ...
T Consensus       156 ~~~  158 (334)
T cd07855         156 GLS  158 (334)
T ss_pred             eec
Confidence            653

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.96  E-value=2.7e-28  Score=213.49  Aligned_cols=147  Identities=23%  Similarity=0.213  Sum_probs=125.7

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCC-CCceEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRRCL  135 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~~l  135 (304)
                      |++.+.+|+|++|.||++....   +++.+|+|.+......    ..+..|+. ++.++|+|++++++++... ....++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l   77 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKK---TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYM   77 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECC---CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEE
Confidence            6788999999999999998763   4689999999865311    25666777 9999999999999999876 245599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |+||+++ +|.+++......+++..++.++.|++.||+|||+.   +++|+||+|+||++++++.++|+|||++......
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          78 VFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             Eeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            9999975 99998877645799999999999999999999764   8999999999999999999999999999877544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.96  E-value=9.6e-30  Score=210.12  Aligned_cols=217  Identities=19%  Similarity=0.152  Sum_probs=161.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH--hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL--LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~--l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+-++.||.|+||+|++..++   +.|+..|||+++......   ++..|..  ++.-+.||||+++|.++..+.- |+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk---~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc-Wi  140 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHK---PSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC-WI  140 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcC---ccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce-ee
Confidence            3455789999999999999887   568999999998765532   4444444  7777999999999999998777 99


Q ss_pred             EEeecCCCChhhHhhhc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          136 VFEFMQRGSLRWNLREK----GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .||.|.- ||+.+...-    ...+++.-.-.|..-...||+||.+.+  .|||||+||+|||++..|.+||||||++..
T Consensus       141 CMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGq  217 (361)
T KOG1006|consen  141 CMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQ  217 (361)
T ss_pred             eHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHh
Confidence            9999965 877654321    227899999999999999999999776  699999999999999999999999999987


Q ss_pred             cCCCCC-Ccccc---c-----------Cccccccccc------------CCC--CcceeccccCC-----CCCCcc---h
Q 046594          212 CSGGSN-RRNCE---K-----------TSEMAEDIND------------FVG--GQECLDQRLYI-----PNEKFK---I  254 (304)
Q Consensus       212 ~~~~~~-~~~~~---~-----------~~~~s~DV~S------------~~~--~~~~~~~~~~~-----~~~~~~---~  254 (304)
                      +..+.. +...|   +           +..+.+||||            ||-  +..++++--..     +.-..+   .
T Consensus       218 Lv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~  297 (361)
T KOG1006|consen  218 LVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECV  297 (361)
T ss_pred             HHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccccc
Confidence            755432 11111   1           2333399999            332  22222211000     001122   3


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+..+..++..|+.     +|..+||+..+++++
T Consensus       298 ~~s~~~~~fintCl~-----Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  298 HYSFSMVRFINTCLI-----KDRSDRPKYDDLKKF  327 (361)
T ss_pred             ccCHHHHHHHHHHhh-----cccccCcchhhhhcC
Confidence            367889999999999     999999999998763

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2.6e-28  Score=218.47  Aligned_cols=225  Identities=20%  Similarity=0.234  Sum_probs=167.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCC----C
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGL----Q  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~----~  131 (304)
                      ||++.+.||.|++|.||++....   .+..+|+|++.....    ...+.+|+. ++.++|+||+++++++...+    .
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKR---TGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFN   77 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCC---CCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccccc
Confidence            68999999999999999998753   478999999876432    126667777 99999999999999987764    3


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|++|||+++ +|.+++.... .+++..++.++.|++.||+|||..   |++||||||+|||++.++.++|+|||++..
T Consensus        78 ~~~lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~  152 (330)
T cd07834          78 DVYIVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG  152 (330)
T ss_pred             ceEEEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence            56999999975 8999987766 899999999999999999999654   899999999999999999999999999987


Q ss_pred             cCCCCC-----Cccccc----------Cc-ccc--ccccc--------------CCCCc------ceec-----------
Q 046594          212 CSGGSN-----RRNCEK----------TS-EMA--EDIND--------------FVGGQ------ECLD-----------  242 (304)
Q Consensus       212 ~~~~~~-----~~~~~~----------~~-~~s--~DV~S--------------~~~~~------~~~~-----------  242 (304)
                      ......     ....++          .. ..+  +||||              |....      .+.+           
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  232 (330)
T cd07834         153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK  232 (330)
T ss_pred             ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence            655431     111111          11 223  99999              11100      0000           


Q ss_pred             ----cc-------c----CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHhhhc
Q 046594          243 ----QR-------L----YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQLFS  298 (304)
Q Consensus       243 ----~~-------~----~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~~~~  298 (304)
                          ..       .    ..+........+..+.+++.+||+     .+|++|||+.+++++  ++++.....
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-----~~P~~Rpt~~~ll~~~~~~~~~~~~~  300 (330)
T cd07834         233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLV-----FDPKKRITADEALAHPYLAQLHDPED  300 (330)
T ss_pred             hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHcc-----CChhhCCCHHHHHhCccHHhhccccc
Confidence                00       0    000000112245678899999999     999999999999986  777666443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=4.7e-28  Score=211.89  Aligned_cols=145  Identities=22%  Similarity=0.308  Sum_probs=122.3

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccc--hh-HHHHHHH-hhCCC-CCcccceeeeeeCCCCceEEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--QT-KLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~~-~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~lv  136 (304)
                      |++.+.||+|++|.||++....   .++.+++|++.....  .. ....|+. +++++ |+|++++++++..+ ...++|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-~~~~lv   76 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKE---TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN-DELYFV   76 (283)
T ss_pred             CeeheeeccCCceEEEEEEECC---CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC-CcEEEE
Confidence            6788999999999999998753   468899999875432  11 3334555 88888 99999999999886 445999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |||+ +|+|.+.+.... ..+++..+..++.|++.+|.|||+.   +++|+||+|+||+++.++.++|+|||++.....
T Consensus        77 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          77 FEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             EecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence            9999 779999887764 3789999999999999999999764   899999999999999999999999999986654

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-28  Score=215.94  Aligned_cols=220  Identities=20%  Similarity=0.243  Sum_probs=169.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---------HHHHHHH-hhCCCCCcccceeeeeeC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---------KLEEEIL-LKSSSHLNIVTLLGYPQD  128 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---------~~~~e~~-l~~l~h~niv~~~~~~~~  128 (304)
                      .+||-++..||+|||+.||++.+.   .+.+.||||+-.....+.         .-.+|+. -+.+.||.||++++++.-
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl---~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl  538 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDL---TEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL  538 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhccc---chhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence            557788899999999999999885   356899999976554433         2234555 888999999999999987


Q ss_pred             CCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC---CCCCeeEcc
Q 046594          129 GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD---ELCNAKLAG  205 (304)
Q Consensus       129 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~---~~~~~kl~D  205 (304)
                      +...+|-|+|||+|.+|+-+|..+. .+++..+..|+.||+.||.||.+. +++|||-||||.|||+.   .-|.+||+|
T Consensus       539 DtdsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD  616 (775)
T KOG1151|consen  539 DTDSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD  616 (775)
T ss_pred             ccccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence            7777799999999999999998887 899999999999999999999884 67899999999999995   457899999


Q ss_pred             cccccccCCCCCC-------ccc--cc--------------Ccccc--ccccc--------------CCCCc---ceecc
Q 046594          206 FGAANYCSGGSNR-------RNC--EK--------------TSEMA--EDIND--------------FVGGQ---ECLDQ  243 (304)
Q Consensus       206 fgla~~~~~~~~~-------~~~--~~--------------~~~~s--~DV~S--------------~~~~~---~~~~~  243 (304)
                      ||+++.+......       +..  |+              +..++  .||||              |+...   +++..
T Consensus       617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe  696 (775)
T KOG1151|consen  617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE  696 (775)
T ss_pred             cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh
Confidence            9999988655431       111  11              44555  99999              22222   22222


Q ss_pred             ccCC--CCCCcc--hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          244 RLYI--PNEKFK--ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       244 ~~~~--~~~~~~--~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      +...  ....||  +..+.+..++|.+||.     +.-++|....++..
T Consensus       697 NTIlkAtEVqFP~KPvVsseAkaFIRRCLa-----YRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  697 NTILKATEVQFPPKPVVSSEAKAFIRRCLA-----YRKEDRIDVQQLAC  740 (775)
T ss_pred             hchhcceeccCCCCCccCHHHHHHHHHHHH-----hhhhhhhhHHHHcc
Confidence            2111  123444  3456889999999999     99999988777654

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=7e-28  Score=209.58  Aligned_cols=216  Identities=15%  Similarity=0.095  Sum_probs=157.0

Q ss_pred             HHhhcccccc--CCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHHhhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSF--GDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~l--g~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.+  |+|+||.||++..+.   ++..+|+|......... .+.+......+|||++++++++...+ .+++|
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~-~e~~~~~~~~~h~~iv~~~~~~~~~~-~~~iv   87 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKP---TQKLFVQKIIKAKNFNA-IEPMVHQLMKDNPNFIKLYYSVTTLK-GHVLI   87 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcC---CCcEEEEEEEehhhcch-hhHHHHHHhhcCCCEEEEEEEEecCC-eeEEE
Confidence            4567777766  999999999998763   47889999987543221 11111111227999999999998875 45999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++.... .+++..+..++.|+++||+|||+.   +++||||||+||+++.++ .++|+|||++......
T Consensus        88 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  163 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP  163 (267)
T ss_pred             EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence            99999999999998776 799999999999999999999654   899999999999999988 9999999998766443


Q ss_pred             CC-Cccccc-------Ccccc--ccccc-----------CCCCc----cee-----ccccCCCCCCcchHHHHHHHHHHH
Q 046594          216 SN-RRNCEK-------TSEMA--EDIND-----------FVGGQ----ECL-----DQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       216 ~~-~~~~~~-------~~~~s--~DV~S-----------~~~~~----~~~-----~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      .. ......       ...++  +||||           ..+..    +.+     .... ......+...+..+.+++.
T Consensus       164 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~  242 (267)
T PHA03390        164 SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQ  242 (267)
T ss_pred             ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHH
Confidence            22 111111       12223  89999           11110    100     0111 0012333456788999999


Q ss_pred             HhccccCCCCCCCCCCC-HHHHHHH
Q 046594          266 WCISCCSNIEGNENHPK-IVDVLSG  289 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps-~~~vl~~  289 (304)
                      +||+     .||.+||+ ++++++|
T Consensus       243 ~~l~-----~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        243 SMLK-----YNINYRLTNYNEIIKH  262 (267)
T ss_pred             HHhc-----cChhhCCchHHHHhcC
Confidence            9999     99999996 6998864

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.95  E-value=5.9e-28  Score=211.02  Aligned_cols=215  Identities=20%  Similarity=0.194  Sum_probs=161.5

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      |++.+.+|.|++|.||++...   .+++.+++|.+......    ..+..|+. +++++|+||+++++++..++ .++++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v   76 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDK---LTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG-DLYLV   76 (283)
T ss_pred             CccceeeecCCCceEEEEEcC---CCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC-CEEEE
Confidence            567889999999999999875   45789999998765433    25666777 99999999999999998874 44999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      +||+++ +|.+.+......+++..+..++.|++.||+|||..   +++|+||||+||+++.++.++|+|||.+.......
T Consensus        77 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118          77 FEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             EeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence            999976 89888887655899999999999999999999764   89999999999999999999999999987665443


Q ss_pred             C--Cccccc----------Cc-ccc--ccccc--------------CCCCcc------e----ec------ccc------
Q 046594          217 N--RRNCEK----------TS-EMA--EDIND--------------FVGGQE------C----LD------QRL------  245 (304)
Q Consensus       217 ~--~~~~~~----------~~-~~s--~DV~S--------------~~~~~~------~----~~------~~~------  245 (304)
                      .  ....+.          .. ..+  +||||              |+....      +    .+      +.+      
T Consensus       153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (283)
T cd05118         153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARN  232 (283)
T ss_pred             ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhh
Confidence            1  000011          11 223  89999              111110      0    00      000      


Q ss_pred             ---------CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          246 ---------YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       246 ---------~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                               ...........+..+.+++.+||+     +||.+||++.+++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-----~~P~~Rp~~~~ll~~  280 (283)
T cd05118         233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLH-----YDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhccccccCHHHhhhhhCHHHHHHHHHHhc-----cCcccCcCHHHHhhC
Confidence                     000001122356789999999999     999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.95  E-value=6.9e-28  Score=216.54  Aligned_cols=147  Identities=31%  Similarity=0.381  Sum_probs=123.4

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCC-CCCcccceeeeeeCCC-
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGL-  130 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~-  130 (304)
                      +..+|++.+.+|+|+||.||++.+.   .+++.+|+|++.....    ...+..|+. ++++ +||||+++++++...+ 
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~   81 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDR---RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND   81 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEc---CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence            4678999999999999999998875   3468999998854221    124555666 9999 9999999999986543 


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ..+++||||+++ +|.+++...  .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++.
T Consensus        82 ~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~  155 (337)
T cd07852          82 KDIYLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR  155 (337)
T ss_pred             ceEEEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence            356999999975 999888765  689999999999999999999764   89999999999999999999999999997


Q ss_pred             ccC
Q 046594          211 YCS  213 (304)
Q Consensus       211 ~~~  213 (304)
                      ...
T Consensus       156 ~~~  158 (337)
T cd07852         156 SLS  158 (337)
T ss_pred             ccc
Confidence            654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.95  E-value=1.7e-27  Score=208.59  Aligned_cols=216  Identities=22%  Similarity=0.137  Sum_probs=155.6

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH----hhCCCCCcccceeeeeeCCCC--
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL----LKSSSHLNIVTLLGYPQDGLQ--  131 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~----l~~l~h~niv~~~~~~~~~~~--  131 (304)
                      |++.+.+|+|+||.||++.++.   ++..+|+|.+.......    .+..|+.    +++++|+|++++++++...+.  
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   77 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLN---TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR   77 (287)
T ss_pred             CeEEEEecccCceEEEEEEECC---CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC
Confidence            6788999999999999999863   57899999997543222    3333433    455579999999999987654  


Q ss_pred             --ceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          132 --RRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       132 --~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                        .++++|||+++ +|.+++..... .+++..++.++.|++.||+|||+.   +++|+||+|+||+++.++.++|+|||+
T Consensus        78 ~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~  153 (287)
T cd07838          78 ELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGL  153 (287)
T ss_pred             CceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCc
Confidence              25999999975 89998876543 689999999999999999999764   799999999999999999999999999


Q ss_pred             ccccCCCCC-Cccccc----------Ccccc--cccccC-----------CCCc---------ceec-------------
Q 046594          209 ANYCSGGSN-RRNCEK----------TSEMA--EDINDF-----------VGGQ---------ECLD-------------  242 (304)
Q Consensus       209 a~~~~~~~~-~~~~~~----------~~~~s--~DV~S~-----------~~~~---------~~~~-------------  242 (304)
                      +........ ....+.          ....+  +||||+           +...         .+.+             
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07838         154 ARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN  233 (287)
T ss_pred             ceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence            877644322 111111          12222  899991           1100         0000             


Q ss_pred             ---------cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 ---------QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 ---------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                               ............+....+.+++.+||+     .||.+||++.++++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-----~dp~~Rp~~~~il~~  284 (287)
T cd07838         234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLT-----FNPHKRISAFEALQH  284 (287)
T ss_pred             cccchhhcccccccchhhhhhhhhHHHHHHHHHHhc-----cCCccCCCHHHHhcC
Confidence                     000000000112335678899999999     999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.95  E-value=3.6e-28  Score=218.95  Aligned_cols=151  Identities=24%  Similarity=0.272  Sum_probs=126.3

Q ss_pred             HHHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           55 TLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        55 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      .+-+..+|++.+.||+|+||.||++...   .++..||+|........    ..+..|+. +++++||||+++++++...
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (343)
T cd07880          10 IWEVPDRYRDLKQVGSGAYGTVCSALDR---RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPD   86 (343)
T ss_pred             hhccccceEEEEEeeecCCeEEEEEEEC---CCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCC
Confidence            4446789999999999999999998865   35789999998643222    14566777 9999999999999998755


Q ss_pred             CC-----ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          130 LQ-----RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       130 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      ..     .+++||||+ +++|.+++...  .+++..+..++.|++.||+|||..   +++||||||+||+++.++.++|+
T Consensus        87 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~  160 (343)
T cd07880          87 LSLDRFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKIL  160 (343)
T ss_pred             ccccccceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence            32     348999999 66998888653  689999999999999999999654   89999999999999999999999


Q ss_pred             ccccccccCC
Q 046594          205 GFGAANYCSG  214 (304)
Q Consensus       205 Dfgla~~~~~  214 (304)
                      |||++.....
T Consensus       161 dfg~~~~~~~  170 (343)
T cd07880         161 DFGLARQTDS  170 (343)
T ss_pred             eccccccccc
Confidence            9999986644

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.95  E-value=1.9e-27  Score=211.40  Aligned_cols=140  Identities=21%  Similarity=0.129  Sum_probs=113.4

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEecccc-ch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA-SQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~-~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.+.+|.|+++  |.+...   .+++.+|+|++.... ..   ..+..|+. ++.++|+||+++++++...+. .+++||
T Consensus         6 i~~~~~~~~~v--~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~-~~~~~e   79 (314)
T cd08216           6 IGKCFEDLMIV--HLAKHK---PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSE-LYVVSP   79 (314)
T ss_pred             hhHhhcCCceE--EEEEec---CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCe-EEEEEe
Confidence            34444555554  444443   257899999987542 11   27777888 999999999999999988744 499999


Q ss_pred             ecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          139 FMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |+++|+|.+++.... ..+++.....++.|++.||+|||+.   +|+||||||+||+++.++.++|+|||.+...
T Consensus        80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~  151 (314)
T cd08216          80 LMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSM  151 (314)
T ss_pred             ccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceee
Confidence            999999999998653 3689999999999999999999764   7999999999999999999999999988644

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=5.8e-28  Score=213.98  Aligned_cols=149  Identities=24%  Similarity=0.250  Sum_probs=124.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCC--
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ--  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~--  131 (304)
                      ..+|++.+.||+|+||.||++.++.   +++.+|+|.+.......    .+.+|+. ++.++||||+++++++.....  
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIK---TGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKS   83 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECC---CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccc
Confidence            4689999999999999999998763   46899999986543222    4556667 999999999999998754432  


Q ss_pred             -----ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          132 -----RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       132 -----~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                           .+++|+||+++ +|.+.+......+++..+..++.|+++||+|||..   +++||||||+||++++++.++|+||
T Consensus        84 ~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df  159 (311)
T cd07866          84 KRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF  159 (311)
T ss_pred             cccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence                 36999999976 78877776555899999999999999999999654   8999999999999999999999999


Q ss_pred             ccccccCC
Q 046594          207 GAANYCSG  214 (304)
Q Consensus       207 gla~~~~~  214 (304)
                      |+++....
T Consensus       160 g~~~~~~~  167 (311)
T cd07866         160 GLARPYDG  167 (311)
T ss_pred             ccchhccC
Confidence            99976543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=9.7e-28  Score=211.61  Aligned_cols=219  Identities=13%  Similarity=0.036  Sum_probs=151.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-------------HHHHHHH-hhCCCCCcccceeee
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-------------KLEEEIL-LKSSSHLNIVTLLGY  125 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~e~~-l~~l~h~niv~~~~~  125 (304)
                      ++|++.+.||+|+||.||++........+..+++|.........             ....+.. +..+.|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            58999999999999999999876432225677777654332211             0111222 567799999999997


Q ss_pred             eeCCCC---ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCee
Q 046594          126 PQDGLQ---RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK  202 (304)
Q Consensus       126 ~~~~~~---~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~k  202 (304)
                      +.....   ..++++|++.. ++.+.+.... ..++..+..++.|++.||+|||+   .+++||||||+|||++.++.++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~~  166 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRGY  166 (294)
T ss_pred             eeEecCCceEEEEEEehhcc-CHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCcEE
Confidence            655432   23678888754 7777766543 56888899999999999999965   4899999999999999999999


Q ss_pred             EcccccccccCCCCC---------Cccccc----------Ccccc--ccccc-----------CCCCcce----------
Q 046594          203 LAGFGAANYCSGGSN---------RRNCEK----------TSEMA--EDIND-----------FVGGQEC----------  240 (304)
Q Consensus       203 l~Dfgla~~~~~~~~---------~~~~~~----------~~~~s--~DV~S-----------~~~~~~~----------  240 (304)
                      |+|||+|+.......         ....++          ...++  +||||           ..++...          
T Consensus       167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~  246 (294)
T PHA02882        167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA  246 (294)
T ss_pred             EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence            999999986532111         111222          12223  89999           1111111          


Q ss_pred             -e--ccccCCCCCC-cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          241 -L--DQRLYIPNEK-FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       241 -~--~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                       .  -..+.  ... ....++..+.+++..|+.     .+|++||++.++++.|
T Consensus       247 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        247 KCDFIKRLH--EGKIKIKNANKFIYDFIECVTK-----LSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHHHhh--hhhhccCCCCHHHHHHHHHHHh-----CCCCCCCCHHHHHHhh
Confidence             0  01110  111 123446779999999999     9999999999999876

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.8e-29  Score=207.23  Aligned_cols=152  Identities=20%  Similarity=0.214  Sum_probs=128.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHHhhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEILLKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~niv~~~~~~~~~~---  130 (304)
                      ...|..+.++|+|.||.||+|+.+.   .|+.||+|+.-.++..+     .+++...|..++|+|++.+++.|....   
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n---~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~   92 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKN---TGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPT   92 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcC---ccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCc
Confidence            3478888999999999999999874   46788998876544433     555555599999999999999885431   


Q ss_pred             ----CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          131 ----QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       131 ----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                          ..+|+|+++|++ +|..++......++..++..++.++..||.|+|..   .|+|||+||+|+||+.+|.+||+||
T Consensus        93 ~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADF  168 (376)
T KOG0669|consen   93 NRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADF  168 (376)
T ss_pred             ccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecc
Confidence                237999999998 99999988766899999999999999999999765   6999999999999999999999999


Q ss_pred             ccccccCCCCC
Q 046594          207 GAANYCSGGSN  217 (304)
Q Consensus       207 gla~~~~~~~~  217 (304)
                      |+++.+.....
T Consensus       169 Glar~fs~~~n  179 (376)
T KOG0669|consen  169 GLARAFSTSKN  179 (376)
T ss_pred             ccccceecccc
Confidence            99987765544

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.95  E-value=9.7e-28  Score=214.88  Aligned_cols=223  Identities=22%  Similarity=0.192  Sum_probs=163.0

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ...+|++.+.||+|+||.||++.+.   .++..+|+|++.....    ...+..|+. ++.++||||+++.+++......
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQ---LTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEEC---CCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            3568999999999999999999876   3578999998754221    125556777 9999999999999998775566


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .++++||+ +++|.+++...  ++++.....++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||++...
T Consensus        85 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             EEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            69999999 45998888654  588899999999999999999654   8999999999999999999999999998765


Q ss_pred             CCCCC--Cccccc-------C-cccc--ccccc--------------CCCCcc-----------------ee----cc--
Q 046594          213 SGGSN--RRNCEK-------T-SEMA--EDIND--------------FVGGQE-----------------CL----DQ--  243 (304)
Q Consensus       213 ~~~~~--~~~~~~-------~-~~~s--~DV~S--------------~~~~~~-----------------~~----~~--  243 (304)
                      .....  ......       . ...+  +||||              |+....                 ..    +.  
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (328)
T cd07856         159 DPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT  238 (328)
T ss_pred             CCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence            43221  111100       1 1223  99999              111110                 00    00  


Q ss_pred             -----ccCCCCCCcc-----hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHh
Q 046594          244 -----RLYIPNEKFK-----ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQ  295 (304)
Q Consensus       244 -----~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~  295 (304)
                           .+.. ....+     ...+..+.+++.+||+     .+|++|||+.+++.+  +++.+.
T Consensus       239 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~-----~~P~~R~t~~ell~~~~~~~~~~  296 (328)
T cd07856         239 LRFVQSLPK-REPVPFSEKFKNADPSAIDLLEKMLV-----FDPQKRISAAEALAHPYLAPYHD  296 (328)
T ss_pred             HHHHhhccc-cCCCcHHHHcCCCCHHHHHHHHHHcC-----CChhhCCCHHHHhcCCccccccC
Confidence                 0000 00111     1235789999999999     999999999999876  544443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.95  E-value=5.5e-28  Score=206.55  Aligned_cols=194  Identities=16%  Similarity=0.086  Sum_probs=145.1

Q ss_pred             ccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCCCChhhHh
Q 046594           71 SVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNL  149 (304)
Q Consensus        71 g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l  149 (304)
                      |.+|.||++.++   .+++.+|+|.+.....   +..+.. +....||||+++++++.+.+. .+++|||+++|+|.+++
T Consensus         4 g~~~~v~~~~~~---~~~~~~~~K~i~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~lv~e~~~~~~L~~~l   76 (237)
T cd05576           4 GVIDKVLLVMDT---RTQQTFILKGLRKSSE---YSRERLTIIPHCVPNMVCLHKYIVSEDS-VFLVLQHAEGGKLWSHI   76 (237)
T ss_pred             cccceEEEEEEc---cCCcEEEEEeecchhh---hhhHHHHHHhcCCCceeehhhheecCCe-EEEEEecCCCCCHHHHH
Confidence            889999999986   4578999999976432   223333 556679999999999988744 49999999999999998


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Ccc-------
Q 046594          150 REKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RRN-------  220 (304)
Q Consensus       150 ~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~-------  220 (304)
                      .... .+++..+..++.|++.||+|||+   ++++||||||+||+++.++.++++|||.+........  ...       
T Consensus        77 ~~~~-~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE  152 (237)
T cd05576          77 SKFL-NIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE  152 (237)
T ss_pred             HHhc-CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence            7765 69999999999999999999965   4899999999999999999999999998765543221  000       


Q ss_pred             cccCcccc--cccccCC-------CCc-------ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCH
Q 046594          221 CEKTSEMA--EDINDFV-------GGQ-------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKI  283 (304)
Q Consensus       221 ~~~~~~~s--~DV~S~~-------~~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~  283 (304)
                      .......+  +||||.+       .+.       .......   ....+...+..+.+++.+|++     .||++||++
T Consensus       153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~-----~dp~~R~~~  223 (237)
T cd05576         153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHT---TLNIPEWVSEEARSLLQQLLQ-----FNPTERLGA  223 (237)
T ss_pred             ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhccccc---ccCCcccCCHHHHHHHHHHcc-----CCHHHhcCC
Confidence            00012222  8999910       011       1111111   123445566789999999999     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.95  E-value=6.7e-28  Score=222.26  Aligned_cols=224  Identities=21%  Similarity=0.189  Sum_probs=167.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEecccc---chhHHHHHHH-hhCCCCCcccceeeeeeCCC-----C
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA---SQTKLEEEIL-LKSSSHLNIVTLLGYPQDGL-----Q  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~-----~  131 (304)
                      -+...+.+|+|+||.||+.+++   ..|+.||||.++...   ..+....|+. |++++|+|||++++.-....     .
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnk---etG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~   90 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNK---ETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR   90 (732)
T ss_pred             ceeehhhhcCCccceeeeeccc---ccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence            3567789999999999999987   458999999998743   2336667777 99999999999999866543     1


Q ss_pred             ceEEEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC--CCC--CeeEcc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD--ELC--NAKLAG  205 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~--~~~--~~kl~D  205 (304)
                      .-.+|||||++|||...|++-..  .|++...+.+...++.||.|||++   ||+||||||.||++-  .+|  -.||+|
T Consensus        91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtD  167 (732)
T KOG4250|consen   91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTD  167 (732)
T ss_pred             cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeec
Confidence            23899999999999999986544  799999999999999999999765   899999999999994  334  479999


Q ss_pred             cccccccCCCCC-Cccccc-----------Ccccc--ccccc--------------C---CCCc----------------
Q 046594          206 FGAANYCSGGSN-RRNCEK-----------TSEMA--EDIND--------------F---VGGQ----------------  238 (304)
Q Consensus       206 fgla~~~~~~~~-~~~~~~-----------~~~~s--~DV~S--------------~---~~~~----------------  238 (304)
                      ||.|+.+.++.. .+..|+           ..+++  +|.||              |   .+..                
T Consensus       168 fG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~  247 (732)
T KOG4250|consen  168 FGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG  247 (732)
T ss_pred             ccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence            999999988877 555555           24555  99999              1   1110                


Q ss_pred             ----------ceec--cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCC--CHHHHHHHHHHHHhh
Q 046594          239 ----------ECLD--QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHP--KIVDVLSGLKQVKQL  296 (304)
Q Consensus       239 ----------~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rp--s~~~vl~~L~~~~~~  296 (304)
                                ..++  ..+.+ .....+.....+-.++..+|.     .+|++|-  ...+....+..|.+.
T Consensus       248 v~i~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~kwLa~~L~-----~~~~~~~~~~~~~~Fa~~~dIL~~  313 (732)
T KOG4250|consen  248 VAIGAQEEENGPVEWSSTLPQ-PNHLSRGLATRLTKWLASMLE-----WNPRKRGHEGFDRFFAEVDDILNL  313 (732)
T ss_pred             eeEeeecccCCceeeeccCCC-cccccHHHHhhhhHHHHHHHh-----hhHHHhCCCCcchHHHHHHHHHhh
Confidence                      0011  11100 011122334556677788888     8999998  777777777776653

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.95  E-value=9.1e-28  Score=215.52  Aligned_cols=145  Identities=21%  Similarity=0.223  Sum_probs=122.5

Q ss_pred             Hhhcc-ccccCCccccceeeecceeecCCCcEEEEEEeccccchh----------------HHHHHHH-hhCCCCCcccc
Q 046594           60 KRRRM-LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----------------KLEEEIL-LKSSSHLNIVT  121 (304)
Q Consensus        60 ~~~~~-~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----------------~~~~e~~-l~~l~h~niv~  121 (304)
                      .||.. .+.||.|+||.||++.++   ..++.+|+|.+.......                .+.+|+. ++.++|+||++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   84 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDT---LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG   84 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEEC---CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence            56764 567999999999999875   357899999986543221                3556777 99999999999


Q ss_pred             eeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCe
Q 046594          122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA  201 (304)
Q Consensus       122 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~  201 (304)
                      +++++...+ ..+++|||++ |+|.+++.... .+++.....++.|++.||+|||+.   +++||||+|+||+++.++.+
T Consensus        85 ~~~~~~~~~-~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~  158 (335)
T PTZ00024         85 LVDVYVEGD-FINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGIC  158 (335)
T ss_pred             eeEEEecCC-cEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCE
Confidence            999998774 4599999997 59999987655 799999999999999999999654   89999999999999999999


Q ss_pred             eEcccccccccC
Q 046594          202 KLAGFGAANYCS  213 (304)
Q Consensus       202 kl~Dfgla~~~~  213 (304)
                      +|+|||++....
T Consensus       159 kl~dfg~~~~~~  170 (335)
T PTZ00024        159 KIADFGLARRYG  170 (335)
T ss_pred             EECCccceeecc
Confidence            999999987654

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=2.1e-27  Score=223.04  Aligned_cols=218  Identities=21%  Similarity=0.210  Sum_probs=170.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCC-CCCcccceeeeeeC----CCCce
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSS-SHLNIVTLLGYPQD----GLQRR  133 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l-~h~niv~~~~~~~~----~~~~~  133 (304)
                      .|++.+.+|.|.+|.||++..+   ++++..|+|++......+ +++.|+. |+.. .|||++.++|++.-    .++.+
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~---~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL   96 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHV---KTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL   96 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeee---ecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence            4788999999999999999886   568999999998766555 7777777 5554 89999999999853    34568


Q ss_pred             EEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |||||||.+||.-|+++...+ .+.|.....|++.++.||.+||..   .++|||+|-.|||++.++.+||.|||++..+
T Consensus        97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQl  173 (953)
T KOG0587|consen   97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  173 (953)
T ss_pred             EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence            999999999999999887644 899999999999999999999765   5999999999999999999999999999887


Q ss_pred             CCCCC--Cccccc---------------Ccccc--ccccc-------CCCCc-ceec----------cccCCCCCCcchH
Q 046594          213 SGGSN--RRNCEK---------------TSEMA--EDIND-------FVGGQ-ECLD----------QRLYIPNEKFKIT  255 (304)
Q Consensus       213 ~~~~~--~~~~~~---------------~~~~s--~DV~S-------~~~~~-~~~~----------~~~~~~~~~~~~~  255 (304)
                      .....  .+..|+               ...+.  +|+||       ...+. -.+|          ++-+.+...-|..
T Consensus       174 dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~k  253 (953)
T KOG0587|consen  174 DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKK  253 (953)
T ss_pred             ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhh
Confidence            65544  333333               12222  99999       11111 1111          1111112234567


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          256 SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       256 ~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+.++.++|..||.     +|-++||++.++++|
T Consensus       254 Ws~~FndFIs~cL~-----Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  254 WSKKFNDFISTCLV-----KDYEQRPSTEELLKH  282 (953)
T ss_pred             HHHHHHHHHHHHHh-----hccccCcchhhhccC
Confidence            78999999999999     999999999999875

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.95  E-value=2.6e-27  Score=206.86  Aligned_cols=146  Identities=27%  Similarity=0.315  Sum_probs=125.0

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      |+..+.+|+|++|.||.+...   .+++.+++|.+......    ..+..|+. ++.++|+|++++++++...+ .+++|
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~~v   76 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDK---KTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER-KLYLV   76 (282)
T ss_pred             CeeehcccccCcceEEEeeec---CCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC-ceEEE
Confidence            567788999999999999876   34789999999865322    25556677 99999999999999998874 44999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      +||+++ +|.+++......+++..+..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||++......
T Consensus        77 ~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~  151 (282)
T cd07829          77 FEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIP  151 (282)
T ss_pred             ecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence            999985 99999988744799999999999999999999764   8999999999999999999999999998876443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.7e-27  Score=204.38  Aligned_cols=208  Identities=19%  Similarity=0.157  Sum_probs=157.1

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +|+|+||.||.+....   +++.+++|.+......     ..+..|+. +++++|+||+++++.+..++ ..+++|||++
T Consensus         1 lg~G~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e~~~   76 (250)
T cd05123           1 LGKGSFGKVLLVRKKD---TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE-KLYLVLEYAP   76 (250)
T ss_pred             CCCCCceEEEEEEECC---CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC-eeEEEEecCC
Confidence            6899999999988753   5789999998764322     26677777 99999999999999988774 4499999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Cc
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RR  219 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~  219 (304)
                      +++|.+++.... .+++..+..++.|++.||.|||.   .+++|+||+|+||+++.++.++|+|||++........  ..
T Consensus        77 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~  152 (250)
T cd05123          77 GGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT  152 (250)
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccC
Confidence            999999998776 68999999999999999999976   4899999999999999999999999999877654311  11


Q ss_pred             cccc----------Ccccc--ccccc--------------CCCCc-ceeccccCCCCCCcchHHHHHHHHHHHHhccccC
Q 046594          220 NCEK----------TSEMA--EDIND--------------FVGGQ-ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCS  272 (304)
Q Consensus       220 ~~~~----------~~~~s--~DV~S--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~  272 (304)
                      ..+.          ....+  +|+||              +.... .............++...+..+.+++.+||.   
T Consensus       153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~---  229 (250)
T cd05123         153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQ---  229 (250)
T ss_pred             CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhc---
Confidence            1111          11122  99999              11111 0111111111234555557889999999999   


Q ss_pred             CCCCCCCCCCH---HHHHH
Q 046594          273 NIEGNENHPKI---VDVLS  288 (304)
Q Consensus       273 ~~~dp~~Rps~---~~vl~  288 (304)
                        .||++||++   .++++
T Consensus       230 --~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         230 --KDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             --CCHhhCCCcccHHHHHh
Confidence              999999999   55554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.95  E-value=8.4e-28  Score=214.88  Aligned_cols=212  Identities=21%  Similarity=0.173  Sum_probs=165.2

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEecccc---c-hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEee
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA---S-QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~---~-~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~  139 (304)
                      .+.||.|.||+||.+.++   +.|+.||||++....   . +++++.|+. |.++.||.||.+.-.|... +.+++|||-
T Consensus       569 devLGSGQFG~VYgg~hR---ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~-ervFVVMEK  644 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHR---KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP-ERVFVVMEK  644 (888)
T ss_pred             HhhccCCcceeeecceec---ccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC-ceEEEEehh
Confidence            478999999999999988   468999999987532   2 238888988 9999999999999999888 555999999


Q ss_pred             cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC---CCeeEcccccccccCCCC
Q 046594          140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL---CNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       140 ~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~  216 (304)
                      +.|.-|+-.|....+++++.....++.||+.||.|||.   ++|+|+||||+|||+...   .++||||||+|+.+.+..
T Consensus       645 l~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  645 LHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             hcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence            96533444555555599999999999999999999954   489999999999999743   489999999999998765


Q ss_pred             C-CcccccCcccc------------ccccc--------------CCCCcceec----cccCCCCCCcchHHHHHHHHHHH
Q 046594          217 N-RRNCEKTSEMA------------EDIND--------------FVGGQECLD----QRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       217 ~-~~~~~~~~~~s------------~DV~S--------------~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      - ....|++.|.+            -|+||              |.+++++-|    ..+.+| .+...+.+....++|.
T Consensus       722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyP-p~PW~eis~~AidlIn  800 (888)
T KOG4236|consen  722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYP-PNPWSEISPEAIDLIN  800 (888)
T ss_pred             hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccC-CCchhhcCHHHHHHHH
Confidence            5 44455533322            79999              555554444    233222 2222456778889999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..|+     ..-.+|-|.++.+.|
T Consensus       801 ~LLq-----Vkm~kRysvdk~lsh  819 (888)
T KOG4236|consen  801 NLLQ-----VKMRKRYSVDKSLSH  819 (888)
T ss_pred             HHHH-----HHHHHhcchHhhccc
Confidence            9999     888999999887765

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.95  E-value=1.9e-27  Score=214.24  Aligned_cols=144  Identities=22%  Similarity=0.237  Sum_probs=120.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCC------
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGL------  130 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~------  130 (304)
                      .||++.+.||.|+||.||++..+   ..+..||+|.+.......  .+.+|+. +++++||||+++++++....      
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~---~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDS---DCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEEC---CCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            68999999999999999999876   357899999987654333  5667777 99999999999998766542      


Q ss_pred             -------CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCee
Q 046594          131 -------QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAK  202 (304)
Q Consensus       131 -------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~k  202 (304)
                             ..+++++||+++ +|.+++...  .+++..++.++.|++.||+|||+.   +++||||||+||+++. ++.++
T Consensus        82 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          82 VGSLTELNSVYIVQEYMET-DLANVLEQG--PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             cccccccceEEEEeecccc-cHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence                   235899999974 998888643  689999999999999999999754   8999999999999984 56789


Q ss_pred             Eccccccccc
Q 046594          203 LAGFGAANYC  212 (304)
Q Consensus       203 l~Dfgla~~~  212 (304)
                      |+|||++...
T Consensus       156 l~dfg~~~~~  165 (342)
T cd07854         156 IGDFGLARIV  165 (342)
T ss_pred             ECCcccceec
Confidence            9999999765

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.8e-28  Score=215.69  Aligned_cols=209  Identities=21%  Similarity=0.223  Sum_probs=169.8

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh------HHHHHHHhhCCCCCcccceeeeeeCCCCceEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT------KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      |+.-+.||+|+||.|+.+..+.+   |+.+|.|++.......      .+.|...|.+++.++||.+-..|... +.+++
T Consensus       187 F~~~RvlGkGGFGEV~acqvraT---GKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk-d~LCl  262 (591)
T KOG0986|consen  187 FRVYRVLGKGGFGEVCACQVRAT---GKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK-DALCL  262 (591)
T ss_pred             eeeeEEEecccccceeEEEEecc---hhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC-CceEE
Confidence            44567899999999999998865   7899999886533221      44444449999999999998888887 55699


Q ss_pred             EEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |+..|.||+|.-+|.+.+. .+++..+..++.+|+.||++||   +.+||.|||||+|||+|++|+++|+|.|+|..+..
T Consensus       263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~  339 (591)
T KOG0986|consen  263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE  339 (591)
T ss_pred             EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence            9999999999988887765 7999999999999999999995   45899999999999999999999999999999998


Q ss_pred             CCC-CcccccCcccc------------ccccc--------------CCCCc-----ceeccccCCCCCCcchHHHHHHHH
Q 046594          215 GSN-RRNCEKTSEMA------------EDIND--------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       215 ~~~-~~~~~~~~~~s------------~DV~S--------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ... ....|+.|||+            +|.||              |....     +-+|++......+++...++++.+
T Consensus       340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eaks  419 (591)
T KOG0986|consen  340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKS  419 (591)
T ss_pred             CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHH
Confidence            888 44467756655            67777              11111     345555555566788888999999


Q ss_pred             HHHHhccccCCCCCCCCCCC
Q 046594          263 IEKWCISCCSNIEGNENHPK  282 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps  282 (304)
                      |....|.     +||.+|--
T Consensus       420 lc~~LL~-----Kdp~~RLG  434 (591)
T KOG0986|consen  420 LCEGLLT-----KDPEKRLG  434 (591)
T ss_pred             HHHHHHc-----cCHHHhcc
Confidence            9999999     99999863

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.95  E-value=6.2e-27  Score=211.12  Aligned_cols=151  Identities=21%  Similarity=0.209  Sum_probs=124.6

Q ss_pred             HHHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           55 TLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        55 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      .+.+..+|++.+.||+|+||.||++.+.   .+++.||+|++......    ..+.+|+. +++++||||+++++++...
T Consensus        12 ~~~~~~~y~~~~~lg~G~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877          12 IWEVPERYQNLSPVGSGAYGSVCAAFDT---KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HhhccCceEEEEEeeecCCeEEEEEEEc---CCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            3455689999999999999999998765   35789999998753221    25556777 9999999999999987543


Q ss_pred             C-----CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          130 L-----QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       130 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      .     ...+++++++ +++|.+++...  .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~  162 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL  162 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEe
Confidence            2     3357888887 67998887654  589999999999999999999764   89999999999999999999999


Q ss_pred             ccccccccCC
Q 046594          205 GFGAANYCSG  214 (304)
Q Consensus       205 Dfgla~~~~~  214 (304)
                      |||++.....
T Consensus       163 dfg~~~~~~~  172 (345)
T cd07877         163 DFGLARHTDD  172 (345)
T ss_pred             cccccccccc
Confidence            9999886543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.95  E-value=5.2e-27  Score=210.44  Aligned_cols=147  Identities=22%  Similarity=0.274  Sum_probs=119.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCC-CCCcccceeeeeeCC---CC
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSS-SHLNIVTLLGYPQDG---LQ  131 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l-~h~niv~~~~~~~~~---~~  131 (304)
                      +|++.+.||+|+||.||++.+... .++..+|+|.+......    ..+..|+. ++++ +||||+++++.+...   ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAET-SEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCC-CcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            578899999999999999998643 13689999998753211    24555666 8888 599999999875432   23


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+++++||++ ++|.+.+.... .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++..
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~  154 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARG  154 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence            4589999986 59999887655 799999999999999999999654   899999999999999999999999999976


Q ss_pred             cC
Q 046594          212 CS  213 (304)
Q Consensus       212 ~~  213 (304)
                      ..
T Consensus       155 ~~  156 (332)
T cd07857         155 FS  156 (332)
T ss_pred             cc
Confidence            54

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=3.1e-27  Score=212.79  Aligned_cols=227  Identities=20%  Similarity=0.229  Sum_probs=162.3

Q ss_pred             HHHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           55 TLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        55 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      .|.+..+|+..+.||+|+||.||++.+.   .+++.+|+|++......    ..+..|+. ++.++||||+++++++...
T Consensus        10 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~   86 (342)
T cd07879          10 VWELPERYTSLKQVGSGAYGSVCSAIDK---RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSA   86 (342)
T ss_pred             hhccccceEEEEEeeecCCeEEEEEEeC---CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccc
Confidence            3445678999999999999999999875   35789999998753221    14556677 9999999999999998654


Q ss_pred             C-----CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          130 L-----QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       130 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      .     ..+++|+||+.. +|.+++.   ..+++..+..++.|++.||+|||..   +++||||||+||+++.++.++|+
T Consensus        87 ~~~~~~~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~  159 (342)
T cd07879          87 VSGDEFQDFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKIL  159 (342)
T ss_pred             ccCCCCceEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEe
Confidence            2     235899999965 7776653   2689999999999999999999654   89999999999999999999999


Q ss_pred             ccccccccCCCCC--Cccccc-------C-cccc--ccccc--------------CCCCc--ceec--------------
Q 046594          205 GFGAANYCSGGSN--RRNCEK-------T-SEMA--EDIND--------------FVGGQ--ECLD--------------  242 (304)
Q Consensus       205 Dfgla~~~~~~~~--~~~~~~-------~-~~~s--~DV~S--------------~~~~~--~~~~--------------  242 (304)
                      |||+++.......  ..+..+       . ...+  +||||              |....  ..+.              
T Consensus       160 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (342)
T cd07879         160 DFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFV  239 (342)
T ss_pred             eCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            9999976533221  111000       1 1223  99999              11111  0000              


Q ss_pred             --------c----cc-CCCCCCc---chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHhh
Q 046594          243 --------Q----RL-YIPNEKF---KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQL  296 (304)
Q Consensus       243 --------~----~~-~~~~~~~---~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~~  296 (304)
                              .    .. ..++..+   ....+..+.+++.+||+     .||++||++.+++.|  ++.+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-----~dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLE-----LDVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             HHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcC-----CChhhCcCHHHHhcCcchhhcccc
Confidence                    0    00 0000000   01234668899999999     999999999999977  7776554

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.94  E-value=3.5e-27  Score=212.54  Aligned_cols=218  Identities=19%  Similarity=0.180  Sum_probs=159.6

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCC-
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-  131 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~-  131 (304)
                      +..+|++.+.||+|++|.||++.+..   ++..+|+|++......    ..+..|+. +++++|+|++++.+++...+. 
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   89 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTK---TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL   89 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECC---CCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc
Confidence            35689999999999999999998863   4689999998653211    24555666 999999999999998765533 


Q ss_pred             ----ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          132 ----RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       132 ----~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                          .+++|+||+ +++|.+++...  .+++..+..++.|++.||+|||..   |++||||||+||+++.++.++|+|||
T Consensus        90 ~~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg  163 (343)
T cd07851          90 EDFQDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG  163 (343)
T ss_pred             cccccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence                369999999 56999988763  699999999999999999999654   89999999999999999999999999


Q ss_pred             cccccCCCCC--Cccccc-------C-cccc--ccccc--------------CCCCcc------eec--c--------c-
Q 046594          208 AANYCSGGSN--RRNCEK-------T-SEMA--EDIND--------------FVGGQE------CLD--Q--------R-  244 (304)
Q Consensus       208 la~~~~~~~~--~~~~~~-------~-~~~s--~DV~S--------------~~~~~~------~~~--~--------~-  244 (304)
                      ++........  .....+       . ...+  +||||              |+....      +.+  +        . 
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  243 (343)
T cd07851         164 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI  243 (343)
T ss_pred             ccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence            9987643322  111100       1 1222  99999              211110      000  0        0 


Q ss_pred             -----------c-CCCCCCc---chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 -----------L-YIPNEKF---KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 -----------~-~~~~~~~---~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                 + ......+   ....+..+.+++.+||+     .||++|||+.++++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~-----~~P~~Rpt~~ell~h  298 (343)
T cd07851         244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLV-----LDPDKRITAAEALAH  298 (343)
T ss_pred             cchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCC-----CChhhCCCHHHHhcC
Confidence                       0 0000000   11236778999999999     999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.6e-27  Score=217.83  Aligned_cols=215  Identities=18%  Similarity=0.107  Sum_probs=165.5

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHHhhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      +...|.....+|.|+|+.+-.+.+..   .++..++|++.....+..-+..+.+..-+||||+++.+.+.++... |+||
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~---t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~-~~v~  395 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSP---TDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEI-YLVM  395 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccc---cccchhheeccccccccccccchhhhhcCCCcceeecceecCCcee-eeee
Confidence            45678889999999999998888874   4588999999876222221222336666999999999999988555 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee-CCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL-DELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill-~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |.+.++-|.+.+....  .....+..|+.+|+.|+.|||.   +|++||||||+|||+ +..++++|+|||.++......
T Consensus       396 e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~  470 (612)
T KOG0603|consen  396 ELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC  470 (612)
T ss_pred             hhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchhh
Confidence            9999998888777664  3337778899999999999966   489999999999999 588999999999999887662


Q ss_pred             C---Cc------ccccCcccc--ccccc-----------------CCCCcceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          217 N---RR------NCEKTSEMA--EDIND-----------------FVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       217 ~---~~------~~~~~~~~s--~DV~S-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                      .   .+      ..+....++  +|+||                 .|.+.++.....   .+.+....+..+.+|+.+||
T Consensus       471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~---~~~~s~~vS~~AKdLl~~LL  547 (612)
T KOG0603|consen  471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ---MPKFSECVSDEAKDLLQQLL  547 (612)
T ss_pred             cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc---CCccccccCHHHHHHHHHhc
Confidence            1   11      111133333  99999                 222324444443   45666788899999999999


Q ss_pred             cccCCCCCCCCCCCHHHHHHH
Q 046594          269 SCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +     .||.+||+|.++..|
T Consensus       548 ~-----~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  548 Q-----VDPALRLGADEIGAH  563 (612)
T ss_pred             c-----CChhhCcChhhhccC
Confidence            9     999999999999864

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.94  E-value=1.6e-26  Score=219.80  Aligned_cols=150  Identities=16%  Similarity=0.081  Sum_probs=105.2

Q ss_pred             HhhccccccCCccccceeeecceee-cCCCcEEEEEEeccccchhHHHHHHHhhCCCCCcccceeeeee-----CCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQ-----DGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~e~~l~~l~h~niv~~~~~~~-----~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.+... ...+..+|+|++......+...++ .++...+.++..+...+.     ..+..+
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE-RVRRACPNSCADFVYGFLEPVSSKKEDEY  210 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH-HHHhhchhhHHHHHHhhhcccccccCCce
Confidence            4678889999999999999987532 112689999998654333222111 122223333333322211     233456


Q ss_pred             EEEEeecCCCChhhHhhhcCCC-------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          134 CLVFEFMQRGSLRWNLREKGGP-------------------LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~-------------------l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      ++|+||+++++|.+++.....+                   .....+..++.|++.||+|||+   ++|+||||||+|||
T Consensus       211 ~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP~NIL  287 (566)
T PLN03225        211 WLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQNII  287 (566)
T ss_pred             EEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCHHHEE
Confidence            9999999999999998754311                   1233456799999999999965   48999999999999


Q ss_pred             eCC-CCCeeEcccccccccC
Q 046594          195 LDE-LCNAKLAGFGAANYCS  213 (304)
Q Consensus       195 l~~-~~~~kl~Dfgla~~~~  213 (304)
                      ++. ++.+||+|||+|+...
T Consensus       288 l~~~~~~~KL~DFGlA~~l~  307 (566)
T PLN03225        288 FSEGSGSFKIIDLGAAADLR  307 (566)
T ss_pred             EeCCCCcEEEEeCCCccccc
Confidence            985 5799999999998653

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-26  Score=196.65  Aligned_cols=211  Identities=17%  Similarity=0.184  Sum_probs=160.3

Q ss_pred             Hhhccc-cccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRML-KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~-~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .-|++. +.||+|+|+.|-.+...   ..|..+|||++.......   .|+|... ...-.|+||++++++|.++. .+|
T Consensus        77 d~YkLt~e~LGeGAyasVqtcv~i---~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~-~FY  152 (463)
T KOG0607|consen   77 DMYKLTSELLGEGAYASVQTCVSI---QTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT-RFY  152 (463)
T ss_pred             HHHHhHHHHhcCccceeeeeeeee---ccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc-eEE
Confidence            345554 57899999999887764   568999999998765443   5555555 55558999999999999984 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC---CeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC---NAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~---~~kl~Dfgla~~  211 (304)
                      ||||-|.||+|..++.++. .+++.++.++..+|+.||.||   |.+||.||||||+|||-....   .+||+||.+...
T Consensus       153 LVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFl---H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  153 LVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFL---HTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             EEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHH---hhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence            9999999999999998877 799999999999999999999   666999999999999997544   589999998765


Q ss_pred             cCCCCC---------CcccccCccc---------------c--ccccc------------------------CCCCc---
Q 046594          212 CSGGSN---------RRNCEKTSEM---------------A--EDIND------------------------FVGGQ---  238 (304)
Q Consensus       212 ~~~~~~---------~~~~~~~~~~---------------s--~DV~S------------------------~~~~~---  238 (304)
                      ......         .+.+|...+|               .  +|.||                        +..++   
T Consensus       229 ~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr  308 (463)
T KOG0607|consen  229 IKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR  308 (463)
T ss_pred             cccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence            533222         2233332222               2  88888                        22222   


Q ss_pred             --------ceeccccCCCCCCcch----HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          239 --------ECLDQRLYIPNEKFKI----TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       239 --------~~~~~~~~~~~~~~~~----~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                              .+-+...     +||.    ..+.+..+++...+.     .|+.+|-++.++++
T Consensus       309 ~CQ~~LFesIQEGkY-----eFPdkdWahIS~eakdlisnLlv-----rda~~rlsa~~vln  360 (463)
T KOG0607|consen  309 VCQNKLFESIQEGKY-----EFPDKDWAHISSEAKDLISNLLV-----RDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHHHHHhccCC-----cCChhhhHHhhHHHHHHHHHHHh-----ccHHhhhhhhhccC
Confidence                    1222222     4443    346778899999999     99999999999998

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.93  E-value=5.2e-26  Score=196.49  Aligned_cols=168  Identities=18%  Similarity=0.183  Sum_probs=132.3

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCC--C----cccceeeeeeCC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSH--L----NIVTLLGYPQDG  129 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h--~----niv~~~~~~~~~  129 (304)
                      +..||.+...+|+|.||.|..+.++.+   +..||||+++.-.... .-.-|+. |.++.+  |    -+|++.+||...
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~---~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr  163 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRET---KEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR  163 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCC---CceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence            357999999999999999999988754   6899999998765544 3333444 777632  2    267788888777


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-----------
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-----------  197 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-----------  197 (304)
                       ++.|||+|.+ |-|+.++|..++. +++...+..++.|++++++|||+.   +++|-||||+|||+.+           
T Consensus       164 -ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~  238 (415)
T KOG0671|consen  164 -GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKK  238 (415)
T ss_pred             -CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCC
Confidence             5569999999 5599999998765 899999999999999999999665   8999999999999932           


Q ss_pred             ---------CCCeeEcccccccccCCCCC--Cccccc---------Cccccccccc
Q 046594          198 ---------LCNAKLAGFGAANYCSGGSN--RRNCEK---------TSEMAEDIND  233 (304)
Q Consensus       198 ---------~~~~kl~Dfgla~~~~~~~~--~~~~~~---------~~~~s~DV~S  233 (304)
                               +..++++|||.|++..+..+  ..++-+         ++.+.+||||
T Consensus       239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWS  294 (415)
T KOG0671|consen  239 KVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWS  294 (415)
T ss_pred             ccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCcee
Confidence                     23589999999998876664  222222         5555599999

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.93  E-value=6.7e-27  Score=213.99  Aligned_cols=216  Identities=19%  Similarity=0.173  Sum_probs=172.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .+|..+..+|.|.||.||+++++   ..++..|+|+++.....+  -++.|+. ++..+||||+.++|.+...+.- |++
T Consensus        15 ddyellqrvgsgTygdvyKaRd~---~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dkl-wic   90 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDK---RSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKL-WIC   90 (829)
T ss_pred             cchhheeeecCCcccchhhhccc---ccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCc-EEE
Confidence            36888999999999999999997   457899999998876665  5566666 9999999999999999888444 999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||||.+|+|++.-+..+ ++.+.+.....++.++||+||   |.+|-+|||||-.|||+++.|.+|++|||.+..+....
T Consensus        91 MEycgggslQdiy~~Tg-plselqiayvcRetl~gl~yl---hs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati  166 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYL---HSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI  166 (829)
T ss_pred             EEecCCCcccceeeecc-cchhHHHHHHHhhhhccchhh---hcCCcccccccccceeecccCceeecccCchhhhhhhh
Confidence            99999999999888777 899999999999999999999   45588999999999999999999999999998776543


Q ss_pred             C--Cccccc--------------Ccccc-ccccc-----------CCCCc--------ceecccc-CCCCCCcchHHHHH
Q 046594          217 N--RRNCEK--------------TSEMA-EDIND-----------FVGGQ--------ECLDQRL-YIPNEKFKITSLAK  259 (304)
Q Consensus       217 ~--~~~~~~--------------~~~~s-~DV~S-----------~~~~~--------~~~~~~~-~~~~~~~~~~~~~~  259 (304)
                      .  ....|+              .++.. +|||+           .++..        ..+.... ..+..+-+...++.
T Consensus       167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~  246 (829)
T KOG0576|consen  167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEF  246 (829)
T ss_pred             hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHH
Confidence            3  333343              44545 99999           11111        1111111 11122344556788


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      +.++++.|+.     .+|.+|||+..++.
T Consensus       247 fh~fvK~alt-----knpKkRptaeklL~  270 (829)
T KOG0576|consen  247 FHNFVKGALT-----KNPKKRPTAEKLLQ  270 (829)
T ss_pred             HHHHHHHHhc-----CCCccCCChhhhee
Confidence            9999999999     99999999988765

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.1e-26  Score=197.18  Aligned_cols=209  Identities=18%  Similarity=0.212  Sum_probs=164.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---h---HHHHHHHhhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---T---KLEEEILLKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~---~~~~e~~l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +..|..++.||+|.||.|-+++.+++   ++.+|+|+++.+..-   +   .+.|...|+..+||.+..+-..|+.. .+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat---~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~-dr  242 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKAT---GKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ-DR  242 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeeccc---CceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC-ce
Confidence            45677889999999999999998854   799999999865321   1   34444449999999999988777777 66


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||..||.|.-++.+.. .+++.....+..+|..||.|||+   ++|+.||||.+|.|+|.+|++||+|||+++.-
T Consensus       243 lCFVMeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~  318 (516)
T KOG0690|consen  243 LCFVMEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEE  318 (516)
T ss_pred             EEEEEEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhc
Confidence            699999999999998888766 79999999999999999999954   58999999999999999999999999999865


Q ss_pred             CCC-CC-CcccccCcccc------------ccccc---------------CCCCc-ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGG-SN-RRNCEKTSEMA------------EDIND---------------FVGGQ-ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~-~~-~~~~~~~~~~s------------~DV~S---------------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      -.. .. .+.||++.+.+            .|.|.               +..+. .++.-.+ ...-.+|...+++...
T Consensus       319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl-~ed~kFPr~ls~eAkt  397 (516)
T KOG0690|consen  319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL-MEDLKFPRTLSPEAKT  397 (516)
T ss_pred             ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH-hhhccCCccCCHHHHH
Confidence            333 33 66788855555            67777               11111 1111111 1123577788889999


Q ss_pred             HHHHhccccCCCCCCCCCC
Q 046594          263 IEKWCISCCSNIEGNENHP  281 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rp  281 (304)
                      |+.-.|.     +||.+|.
T Consensus       398 LLsGLL~-----kdP~kRL  411 (516)
T KOG0690|consen  398 LLSGLLK-----KDPKKRL  411 (516)
T ss_pred             HHHHHhh-----cChHhhc
Confidence            9999999     9999996

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.93  E-value=2.8e-25  Score=206.95  Aligned_cols=151  Identities=19%  Similarity=0.168  Sum_probs=112.8

Q ss_pred             HhhccccccCCccccceeeeccee-------------ecCCCcEEEEEEeccccchh--HH--------------HHHHH
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRA-------------VSRNLTVVAVKARRYMASQT--KL--------------EEEIL  110 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~-------------~~~~~~~vavK~~~~~~~~~--~~--------------~~e~~  110 (304)
                      .+|++.++||+|+||.||++....             ....++.||||++.......  .|              ..|+.
T Consensus       145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~  224 (507)
T PLN03224        145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY  224 (507)
T ss_pred             cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence            368889999999999999885421             11345789999987543211  11              12333


Q ss_pred             -hhCCCCCcc-----cceeeeeeCC-------CCceEEEEeecCCCChhhHhhhcCC-----------------------
Q 046594          111 -LKSSSHLNI-----VTLLGYPQDG-------LQRRCLVFEFMQRGSLRWNLREKGG-----------------------  154 (304)
Q Consensus       111 -l~~l~h~ni-----v~~~~~~~~~-------~~~~~lv~e~~~~gsL~~~l~~~~~-----------------------  154 (304)
                       +.+++|.++     ++++++|...       ....+|||||+++|+|.++++...+                       
T Consensus       225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~  304 (507)
T PLN03224        225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD  304 (507)
T ss_pred             HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence             666666544     6777776532       2345999999999999999875321                       


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          155 PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       155 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      .+++..+..++.|++.||+|||..   +|+||||||+|||++.++.+||+|||++....
T Consensus       305 ~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~  360 (507)
T PLN03224        305 KRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMC  360 (507)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence            246778899999999999999754   79999999999999999999999999997653

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.93  E-value=6.4e-25  Score=186.54  Aligned_cols=204  Identities=26%  Similarity=0.265  Sum_probs=154.2

Q ss_pred             cccceeeecceeecCCCcEEEEEEeccccc---hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCCCChhh
Q 046594           72 VEGLTLIKGDRAVSRNLTVVAVKARRYMAS---QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW  147 (304)
Q Consensus        72 ~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~  147 (304)
                      +||.||++...+   +++.+++|+......   ...+..|+. +++++|+|++++++++...... ++++||+++++|.+
T Consensus         1 ~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~-~l~~e~~~~~~L~~   76 (244)
T smart00220        1 SFGKVYLARDKK---TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKL-YLVMEYCDGGDLFD   76 (244)
T ss_pred             CceEEEEEEECC---CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEE-EEEEeCCCCCCHHH
Confidence            578999988763   578999999986654   347777877 9999999999999999887444 99999999999999


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-Cccccc---
Q 046594          148 NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-RRNCEK---  223 (304)
Q Consensus       148 ~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~---  223 (304)
                      ++.... .+++..++.++.+++.++.|||..   +++|+||+|+||+++.++.++|+|||.+........ ....+.   
T Consensus        77 ~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  152 (244)
T smart00220       77 LLKKRG-RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEY  152 (244)
T ss_pred             HHHhcc-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCC
Confidence            998765 489999999999999999999764   899999999999999999999999999987765321 111111   


Q ss_pred             -------Ccccc--ccccc--------------CCC-Cc--ceeccccCCCCCCcchH---HHHHHHHHHHHhccccCCC
Q 046594          224 -------TSEMA--EDIND--------------FVG-GQ--ECLDQRLYIPNEKFKIT---SLAKLGDIEKWCISCCSNI  274 (304)
Q Consensus       224 -------~~~~s--~DV~S--------------~~~-~~--~~~~~~~~~~~~~~~~~---~~~~l~~l~~~cl~~~~~~  274 (304)
                             ...++  +|||+              +.. ..  ...+... .........   ....+.+++.+||.     
T Consensus       153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~-----  226 (244)
T smart00220      153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG-KPKPPFPPPEWKISPEAKDLIRKLLV-----  226 (244)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh-ccCCCCccccccCCHHHHHHHHHHcc-----
Confidence                   12222  99999              111 01  1111000 000111111   55789999999999     


Q ss_pred             CCCCCCCCHHHHHHH
Q 046594          275 EGNENHPKIVDVLSG  289 (304)
Q Consensus       275 ~dp~~Rps~~~vl~~  289 (304)
                      .+|++||++.+++++
T Consensus       227 ~~p~~Rp~~~~~~~~  241 (244)
T smart00220      227 KDPEKRLTAEEALQH  241 (244)
T ss_pred             CCchhccCHHHHhhC
Confidence            999999999999873

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.92  E-value=7.2e-25  Score=213.05  Aligned_cols=148  Identities=21%  Similarity=0.212  Sum_probs=128.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +.+|++.+.||+|+||.||++.+..   +++.||+|++......     ..+..|.. ++.++||||+++++++...+ .
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~-~   78 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKN---NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN-N   78 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC-E
Confidence            3579999999999999999998863   5789999998754321     25667777 89999999999999887774 5


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++++|.+++...+ .+++..++.|+.||+.||+|||..   +|+||||||+|||++.++.+||+|||+++..
T Consensus        79 ~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~~~  154 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKVT  154 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence            599999999999999998765 789999999999999999999764   8999999999999999999999999999876


Q ss_pred             CC
Q 046594          213 SG  214 (304)
Q Consensus       213 ~~  214 (304)
                      ..
T Consensus       155 ~~  156 (669)
T cd05610         155 LN  156 (669)
T ss_pred             cC
Confidence            54

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.91  E-value=3.2e-25  Score=179.95  Aligned_cols=226  Identities=16%  Similarity=0.175  Sum_probs=165.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCC-CCcccceeeeeeCCCC-ceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS-HLNIVTLLGYPQDGLQ-RRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~-h~niv~~~~~~~~~~~-~~~l  135 (304)
                      ...|++.+++|+|.++.||.+...   .+.+.++||+++.-... .+.+|+. |..+. ||||+++++...+... ...|
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~---~~~eK~ViKiLKPVkkk-KIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINI---TNNEKCVIKILKPVKKK-KIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             cchHHHHHHHcCccHhhHhccccc---CCCceEEEeeechHHHH-HHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            467999999999999999988764   35689999999875544 4555555 88885 9999999999876533 2379


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEcccccccccCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYCSG  214 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~~~  214 (304)
                      ++||..+.+...+..    .+....+..++.+++.||.|+|+   .||+|||+||.|+++|. .-.++|+|+|+|.++.+
T Consensus       113 iFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp  185 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP  185 (338)
T ss_pred             HhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence            999999977766544    57788899999999999999955   49999999999999995 56899999999999987


Q ss_pred             CCCCccccc--------------Cccccccccc---------------CCCCc-------------------------ce
Q 046594          215 GSNRRNCEK--------------TSEMAEDIND---------------FVGGQ-------------------------EC  240 (304)
Q Consensus       215 ~~~~~~~~~--------------~~~~s~DV~S---------------~~~~~-------------------------~~  240 (304)
                      +.....+..              ...++-|+||               |.+..                         -.
T Consensus       186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~  265 (338)
T KOG0668|consen  186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID  265 (338)
T ss_pred             CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence            765222222              3444589999               11111                         01


Q ss_pred             eccccCC-----CCCC---c-----chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHhhhccc
Q 046594          241 LDQRLYI-----PNEK---F-----KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQLFSSV  300 (304)
Q Consensus       241 ~~~~~~~-----~~~~---~-----~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~~~~~~  300 (304)
                      +|+++.-     ++..   |     ..-.++++.+++.+.|.     .|-.+|+|+.|++.|  +..+.+..+++
T Consensus       266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLr-----YDHqeRlTakEam~HpyF~~~~~~~~~~  335 (338)
T KOG0668|consen  266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLR-----YDHQERLTAKEAMAHPYFAPVREAESSR  335 (338)
T ss_pred             CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHh-----hccccccchHHHhcCchHHHHHHHhhcc
Confidence            2222200     0111   0     11124788899999999     999999999999975  55555555544

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=5e-25  Score=192.21  Aligned_cols=204  Identities=18%  Similarity=0.196  Sum_probs=162.1

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-hh-----HHHHHHHhhCC-CCCcccceeeeeeCCCCce
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-QT-----KLEEEILLKSS-SHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-~~-----~~~~e~~l~~l-~h~niv~~~~~~~~~~~~~  133 (304)
                      .|..+..||+|+||.|.++..+++   .+.+|||+++.+.. ++     .+.|...|... +-|.+++++.+|+.- +.+
T Consensus       350 DFnFl~VlGKGSFGKVlLaerkgt---dELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm-DRL  425 (683)
T KOG0696|consen  350 DFNFLMVLGKGSFGKVLLAERKGT---DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM-DRL  425 (683)
T ss_pred             ccceEEEeccCccceeeeecccCc---chhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh-hhe
Confidence            577788999999999999999876   38899999986532 21     22222224444 678999999998887 556


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+.||+|--.+.+.+ .+.+..+..++.+|+-||-||   |++||+.||||.+||++|.+|++||+|||+++.--
T Consensus       426 yFVMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFL---h~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni  501 (683)
T KOG0696|consen  426 YFVMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  501 (683)
T ss_pred             eeEEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhh---hcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence            99999999999998898887 899999999999999999999   66699999999999999999999999999998653


Q ss_pred             CC-CC-CcccccCcccc------------ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHH
Q 046594          214 GG-SN-RRNCEKTSEMA------------EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       214 ~~-~~-~~~~~~~~~~s------------~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      -. .+ .+.+|++.|++            .|.||              |.+..      .+++.+.     .+|...+.+
T Consensus       502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv-----syPKslSkE  576 (683)
T KOG0696|consen  502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV-----SYPKSLSKE  576 (683)
T ss_pred             cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC-----cCcccccHH
Confidence            32 22 66677755544            78888              32222      3444444     678888899


Q ss_pred             HHHHHHHhccccCCCCCCCCCCC
Q 046594          260 LGDIEKWCISCCSNIEGNENHPK  282 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps  282 (304)
                      ..++++..+.     +.|.+|.-
T Consensus       577 Av~ickg~lt-----K~P~kRLG  594 (683)
T KOG0696|consen  577 AVAICKGLLT-----KHPGKRLG  594 (683)
T ss_pred             HHHHHHHHhh-----cCCccccC
Confidence            9999999999     99999964

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=2e-24  Score=196.96  Aligned_cols=141  Identities=21%  Similarity=0.190  Sum_probs=121.4

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .++.||-|+||.|.++....+   ...+|.|.++..+.-.     ....|.. |....++-||+|+-.|.+.++. |+||
T Consensus       633 kik~iGvGAFGeV~Lv~KvDT---~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL-YFVM  708 (1034)
T KOG0608|consen  633 KIKTIGVGAFGEVCLVRKVDT---RALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL-YFVM  708 (1034)
T ss_pred             EEeeecccccceeEEEeecch---hhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce-EEEE
Confidence            367899999999999876543   4789999887543221     4455666 8899999999999999998555 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ||++||++-.+|.+.+ -+++..+..|+.++..|++++|..   |+|||||||+|||||.+|++||+||||+.-+
T Consensus       709 dYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             eccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccc
Confidence            9999999999999888 899999999999999999999554   9999999999999999999999999998754

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.4e-25  Score=186.30  Aligned_cols=144  Identities=23%  Similarity=0.230  Sum_probs=118.8

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHHhhCCCCCcccceeeeeeCCC----CceEE
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEILLKSSSHLNIVTLLGYPQDGL----QRRCL  135 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~l~~l~h~niv~~~~~~~~~~----~~~~l  135 (304)
                      .+.||-|+||.||...+.   ++|+.||+|++..-...     ..|++...|.-++|.|+...++...-..    ..+|+
T Consensus        58 DRPIGYGAFGVVWsVTDP---RdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDP---RSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCcccccceeEEEeccCC---CCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            679999999999999886   68999999998753222     2555555599999999999888765432    23588


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ++|.|.. +|.+.+-.-. .++.+.+.-+..||++||.|||..   +|+||||||.|.|+++|..+||+|||+++.-...
T Consensus       135 ~TELmQS-DLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d  209 (449)
T KOG0664|consen  135 LTELMQS-DLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR  209 (449)
T ss_pred             HHHHHHh-hhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence            9999965 8888776544 799999999999999999999655   8999999999999999999999999999876554


Q ss_pred             C
Q 046594          216 S  216 (304)
Q Consensus       216 ~  216 (304)
                      .
T Consensus       210 ~  210 (449)
T KOG0664|consen  210 D  210 (449)
T ss_pred             h
Confidence            4

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.91  E-value=5.5e-23  Score=170.35  Aligned_cols=195  Identities=29%  Similarity=0.349  Sum_probs=154.0

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCCC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG  143 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~g  143 (304)
                      ||+|.+|.||++....   +++.+++|+.......   ..+.+|+. ++.++|++++++++++...... ++++||++++
T Consensus         1 l~~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~e~~~~~   76 (215)
T cd00180           1 LGEGGFGTVYLARDKK---TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHL-YLVMEYCEGG   76 (215)
T ss_pred             CCcCCceEEEEEEecC---CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeE-EEEEecCCCC
Confidence            6899999999988753   4789999999987664   47777877 9999999999999999887444 9999999989


Q ss_pred             ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEcccccccccCCCC--CCcc
Q 046594          144 SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYCSGGS--NRRN  220 (304)
Q Consensus       144 sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~~~~~--~~~~  220 (304)
                      +|.+++......+++..+..++.++++++++||+.   +++|+||+|.||+++. ++.++|+|||.+.......  ....
T Consensus        77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~  153 (215)
T cd00180          77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI  153 (215)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence            99999987634689999999999999999999654   8999999999999999 8999999999998765542  1111


Q ss_pred             cccCcccc-------------cccccCCCCcceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHH
Q 046594          221 CEKTSEMA-------------EDINDFVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVL  287 (304)
Q Consensus       221 ~~~~~~~s-------------~DV~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl  287 (304)
                      .....+.+             .|+|+...-                .-....+.+++.+|++     .||++||++.+++
T Consensus       154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~----------------~~~l~~~~~~l~~~l~-----~~p~~R~~~~~l~  212 (215)
T cd00180         154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVI----------------LYELPELKDLIRKMLQ-----KDPEKRPSAKEIL  212 (215)
T ss_pred             cCCCCccChhHhcccCCCCchhhhHHHHHH----------------HHHHHHHHHHHHHHhh-----CCcccCcCHHHHh
Confidence            11111111             444441100                0001788999999999     9999999999998


Q ss_pred             HHH
Q 046594          288 SGL  290 (304)
Q Consensus       288 ~~L  290 (304)
                      +++
T Consensus       213 ~~~  215 (215)
T cd00180         213 EHL  215 (215)
T ss_pred             hCC
Confidence            764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.90  E-value=3.2e-24  Score=171.55  Aligned_cols=147  Identities=20%  Similarity=0.229  Sum_probs=120.0

Q ss_pred             ccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH--hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL--LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~--l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .....||+|++|.|-+.++.   .+|...|+|.+...-...   ++..+..  ++...+|.+|+++|..+..... |+.|
T Consensus        49 ~~i~elGrGayG~vekmrh~---~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv-wIcM  124 (282)
T KOG0984|consen   49 VGIEELGRGAYGVVEKMRHI---QSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV-WICM  124 (282)
T ss_pred             hhhhhhcCCccchhhheeec---cCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE-EEeH
Confidence            34678999999998766665   578999999998654332   4444444  6777899999999998887555 9999


Q ss_pred             eecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          138 EFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       138 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |.|.- ||+.+-++   .++.+++...-+|+..+..||.|||+.-  .++|||+||+|||++.+|++|+||||++..+.+
T Consensus       125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence            99965 88876543   3448999999999999999999999754  699999999999999999999999999988765


Q ss_pred             CC
Q 046594          215 GS  216 (304)
Q Consensus       215 ~~  216 (304)
                      +.
T Consensus       202 Si  203 (282)
T KOG0984|consen  202 SI  203 (282)
T ss_pred             hh
Confidence            43

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.90  E-value=3.4e-24  Score=200.73  Aligned_cols=207  Identities=21%  Similarity=0.177  Sum_probs=144.7

Q ss_pred             ccccCCccccce-eeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEeecC
Q 046594           65 LKSFGDSVEGLT-LIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        65 ~~~lg~g~~g~v-~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      .+.+|.|..|++ |++.+     +|+.||||++-.+... ...+|+. |+.. +|||||++++.-.+. ..+||+.|.|.
T Consensus       514 ~eilG~Gs~Gt~Vf~G~y-----e~R~VAVKrll~e~~~-~A~rEi~lL~eSD~H~NviRyyc~E~d~-qF~YIalELC~  586 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVY-----EGREVAVKRLLEEFFD-FAQREIQLLQESDEHPNVIRYYCSEQDR-QFLYIALELCA  586 (903)
T ss_pred             HHHcccCCCCcEEEEEee-----CCceehHHHHhhHhHH-HHHHHHHHHHhccCCCceEEEEeeccCC-ceEEEEehHhh
Confidence            456789988864 44443     5799999998764433 3345555 6666 799999999887776 45599999997


Q ss_pred             CCChhhHhhhcCC--CC-CHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---C--CCeeEcccccccccC
Q 046594          142 RGSLRWNLREKGG--PL-DWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---L--CNAKLAGFGAANYCS  213 (304)
Q Consensus       142 ~gsL~~~l~~~~~--~l-~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~--~~~kl~Dfgla~~~~  213 (304)
                      . +|+++++....  .. .-...+....|++.||++||..   +|+||||||.||||+.   +  ..++|+|||+++...
T Consensus       587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            6 99999988521  11 1145578899999999999775   7999999999999975   3  479999999999987


Q ss_pred             CCCC-----CcccccCcccc------------ccccc---------------CCCCc----ceeccccCCCCCCcchHHH
Q 046594          214 GGSN-----RRNCEKTSEMA------------EDIND---------------FVGGQ----ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       214 ~~~~-----~~~~~~~~~~s------------~DV~S---------------~~~~~----~~~~~~~~~~~~~~~~~~~  257 (304)
                      .+..     .+..|+.|.++            .||||               |+...    .++........-+...++ 
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~-  741 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDC-  741 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchH-
Confidence            7665     12233322222            79999               11111    222221100000111122 


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                       ...+||.+|+.     ++|..||++.+|+.|
T Consensus       742 -eA~dLI~~ml~-----~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  742 -EAKDLISRMLN-----PDPQLRPSATDVLNH  767 (903)
T ss_pred             -HHHHHHHHhcC-----CCcccCCCHHHHhCC
Confidence             88899999999     999999999999875

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.90  E-value=7.4e-24  Score=179.43  Aligned_cols=215  Identities=22%  Similarity=0.170  Sum_probs=156.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHHhhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEILLKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~l~~l~h~niv~~~~~~~~~~---  130 (304)
                      ..||..++.+|.|.- .|..+.+..   .+++||+|+........     ..+|-..+..++|+||++++.++.-..   
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v---~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~   91 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQV---LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE   91 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhh---ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH
Confidence            458999999999988 666666643   36899999986542221     444444488999999999999986542   


Q ss_pred             --CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          131 --QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       131 --~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                        ..+|+|||+|.. +|.+.+..   .++-.+...+..|++.|++|||..   ||+||||||+||++..+..+||.|||+
T Consensus        92 ~~~e~y~v~e~m~~-nl~~vi~~---elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~  164 (369)
T KOG0665|consen   92 EFQEVYLVMELMDA-NLCQVILM---ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL  164 (369)
T ss_pred             HHHhHHHHHHhhhh-HHHHHHHH---hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence              235999999966 99998884   588999999999999999999665   999999999999999999999999999


Q ss_pred             ccccCCCCC-Cc---cccc-------Ccccc--ccccc--------------CCCCc-----------------------
Q 046594          209 ANYCSGGSN-RR---NCEK-------TSEMA--EDIND--------------FVGGQ-----------------------  238 (304)
Q Consensus       209 a~~~~~~~~-~~---~~~~-------~~~~s--~DV~S--------------~~~~~-----------------------  238 (304)
                      |+....... +.   ++.+       +..++  +||||              |++..                       
T Consensus       165 ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL  244 (369)
T KOG0665|consen  165 ARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL  244 (369)
T ss_pred             hcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence            987665522 11   1111       11133  99999              22111                       


Q ss_pred             --------------------ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          239 --------------------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       239 --------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                          +.+...+..+..+.+......+.+++.+||.     .||++|-|+.++|+|
T Consensus       245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLv-----i~pe~Risv~daL~H  310 (369)
T KOG0665|consen  245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLV-----IDPEKRISVDDALRH  310 (369)
T ss_pred             hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhc-----cChhhcccHHHHhcC
Confidence                                1111111111112223445668899999999     999999999999986

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.90  E-value=2.1e-23  Score=186.55  Aligned_cols=169  Identities=24%  Similarity=0.235  Sum_probs=133.9

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-hh-HHHHHHHhhCCC------CCcccceeeeeeC
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-QT-KLEEEILLKSSS------HLNIVTLLGYPQD  128 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-~~-~~~~e~~l~~l~------h~niv~~~~~~~~  128 (304)
                      .+-.||.+....|+|-|++|..|.+...   |..||||++..... .. -+.|...|++|+      --|.++++..|..
T Consensus       429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r---~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h  505 (752)
T KOG0670|consen  429 LLDSRYEVQGYTGKGVFSTVVRARDQAR---GQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH  505 (752)
T ss_pred             hhcceeEEEeccccceeeeeeeccccCC---CCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence            4467899999999999999999998743   57999999986532 22 333333377774      3478999988888


Q ss_pred             CCCceEEEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-CCeeEcc
Q 046594          129 GLQRRCLVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-CNAKLAG  205 (304)
Q Consensus       129 ~~~~~~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~kl~D  205 (304)
                      . +++|||+|-+.- +|.++|...+.  .|....+..|+.|+.-||..|..+   ||+|.||||+||||++. ..+||||
T Consensus       506 k-nHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCD  580 (752)
T KOG0670|consen  506 K-NHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCD  580 (752)
T ss_pred             c-ceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeecc
Confidence            7 777999999965 99999998876  788899999999999999999554   89999999999999865 5799999


Q ss_pred             cccccccCCCCCCcc------------cccCccccccccc
Q 046594          206 FGAANYCSGGSNRRN------------CEKTSEMAEDIND  233 (304)
Q Consensus       206 fgla~~~~~~~~~~~------------~~~~~~~s~DV~S  233 (304)
                      ||.|.+.....-++.            .|.++.+.-|+||
T Consensus       581 fGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WS  620 (752)
T KOG0670|consen  581 FGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWS  620 (752)
T ss_pred             CccccccccccccHHHHHHhccCcceeecCcccCCcccee
Confidence            999998876654211            1114455589999

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3.7e-23  Score=183.72  Aligned_cols=131  Identities=22%  Similarity=0.202  Sum_probs=108.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHHhhCCC-----C---CcccceeeeeeCC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEILLKSSS-----H---LNIVTLLGYPQDG  129 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~l~~l~-----h---~niv~~~~~~~~~  129 (304)
                      .||.+.++||-|.|++||+|.+..   ..+.||+|+.+...-..  .+.|...|++++     |   .+||+|++.|...
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq---~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQ---NKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ceEEEEEeccccccceeEEEeecc---CCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            799999999999999999999874   45899999998654333  444444466552     3   4699999998654


Q ss_pred             ---CCceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC
Q 046594          130 ---LQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD  196 (304)
Q Consensus       130 ---~~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~  196 (304)
                         +.++|+|+|++ |-+|..+|..... .++...+..|+.|++.||.|||..+  ||||-||||+|||+.
T Consensus       155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC  222 (590)
T ss_pred             CCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence               34689999999 5599999887654 7999999999999999999999876  899999999999993

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.2e-24  Score=193.99  Aligned_cols=215  Identities=19%  Similarity=0.119  Sum_probs=169.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +...+++..||-|+||.|-+......   ...+|+|+++....-     +....|.. |...+.|.||++|--|.+.. .
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~---~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k-y  494 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQ---KATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK-Y  494 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEeccc---chHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch-h
Confidence            44567788999999999988877532   235788877654322     23334444 88888999999999998884 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+.||-|-||.|...|+.++ .++..++..++.-+++|++|||.   ++||.|||||+|.+++.+|-+||.|||+|+.+
T Consensus       495 vYmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki  570 (732)
T KOG0614|consen  495 VYMLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI  570 (732)
T ss_pred             hhhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHh
Confidence            599999999999999999988 89999999999999999999955   48999999999999999999999999999999


Q ss_pred             CCCCC-CcccccCcccc------------ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHH
Q 046594          213 SGGSN-RRNCEKTSEMA------------EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       213 ~~~~~-~~~~~~~~~~s------------~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ..+.. -+.+|++.|++            +|.|+              |....      .++...-   .-++|......
T Consensus       571 ~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid---~i~~Pr~I~k~  647 (732)
T KOG0614|consen  571 GSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID---KIEFPRRITKT  647 (732)
T ss_pred             ccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh---hhhcccccchh
Confidence            88776 66677755544            89999              22222      1222221   34678888888


Q ss_pred             HHHHHHHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      ..+++++...     .+|.+|.-     +.||-+|
T Consensus       648 a~~Lik~LCr-----~~P~ERLG~~~~gI~DIkkH  677 (732)
T KOG0614|consen  648 ATDLIKKLCR-----DNPTERLGYQKGGINDIKKH  677 (732)
T ss_pred             HHHHHHHHHh-----cCcHhhhccccCChHHHHhh
Confidence            9999998888     89999975     6666665

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=6e-23  Score=183.96  Aligned_cols=140  Identities=18%  Similarity=0.027  Sum_probs=109.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEecccc-----c--hhHHHHHHH-hhCCCCCcccceeeeeeCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA-----S--QTKLEEEIL-LKSSSHLNIVTLLGYPQDGL  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~-----~--~~~~~~e~~-l~~l~h~niv~~~~~~~~~~  130 (304)
                      ..+|++.+.||+|+||.||++.++..  +++.+|||+.....     .  ...+..|+. |++++|+|+++.+..+   +
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~   91 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGD--PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G   91 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCC--CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C
Confidence            35799999999999999999987532  46778999875331     1  226788888 9999999999633322   2


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC-CCCCeeeCCCCCeeEcccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNI-TSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dl-kp~Nill~~~~~~kl~Dfgla  209 (304)
                      . .|+||||++|++|.. +..    ..   ...++.|+++||+|||+   .||+|||| ||+|||++.++.+||+|||+|
T Consensus        92 ~-~~LVmE~~~G~~L~~-~~~----~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGlA  159 (365)
T PRK09188         92 K-DGLVRGWTEGVPLHL-ARP----HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQLA  159 (365)
T ss_pred             C-cEEEEEccCCCCHHH-hCc----cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence            3 399999999999963 211    11   14678999999999965   48999999 999999999999999999999


Q ss_pred             cccCCC
Q 046594          210 NYCSGG  215 (304)
Q Consensus       210 ~~~~~~  215 (304)
                      +.....
T Consensus       160 ~~~~~~  165 (365)
T PRK09188        160 SVFRRR  165 (365)
T ss_pred             eecccC
Confidence            976543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.89  E-value=5.5e-23  Score=169.51  Aligned_cols=139  Identities=15%  Similarity=0.080  Sum_probs=105.4

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccch-----------hHH-----------------HHHHH-hhCCC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----------TKL-----------------EEEIL-LKSSS  115 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----------~~~-----------------~~e~~-l~~l~  115 (304)
                      .+.||+|+||.||.+...    +|+.||||+++.....           ..|                 ..|.. +.++.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~----~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   77 (190)
T cd05147           2 NGCISTGKEANVYHATTA----NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV   77 (190)
T ss_pred             CCccccccceEEEEEECC----CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            467999999999999874    5899999999754211           011                 23666 88888


Q ss_pred             CCcccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee
Q 046594          116 HLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL  195 (304)
Q Consensus       116 h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill  195 (304)
                      ++++.....+...  .. ++||||++++++........ +++......++.|++.+|+|+|+  +.||+||||||+|||+
T Consensus        78 ~~~v~~p~~~~~~--~~-~iVmE~i~g~~l~~~~~~~~-~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli  151 (190)
T cd05147          78 TAGIPCPEPILLK--SH-VLVMEFIGDDGWAAPRLKDA-PLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLY  151 (190)
T ss_pred             HCCCCCCcEEEec--CC-EEEEEEeCCCCCcchhhhcC-CCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEE
Confidence            7776443333222  34 89999999887765533333 78999999999999999999952  3389999999999999


Q ss_pred             CCCCCeeEcccccccccCC
Q 046594          196 DELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       196 ~~~~~~kl~Dfgla~~~~~  214 (304)
                      + ++.++|+|||+|.....
T Consensus       152 ~-~~~v~LiDFG~a~~~~~  169 (190)
T cd05147         152 H-DGKLYIIDVSQSVEHDH  169 (190)
T ss_pred             E-CCcEEEEEccccccCCC
Confidence            8 47899999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.89  E-value=2.4e-23  Score=188.12  Aligned_cols=149  Identities=23%  Similarity=0.212  Sum_probs=126.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----------HHHHHHH-hhCCC---CCcccceeeee
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----------KLEEEIL-LKSSS---HLNIVTLLGYP  126 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----------~~~~e~~-l~~l~---h~niv~~~~~~  126 (304)
                      .|..++.+|+|+||.|++|.++   ++...|+||.+..+..-.          ..-.|+. |..++   |+||++++++|
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K---~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHK---ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             cceeeeeccccccceEEEeeec---ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            4778899999999999999998   446899999987654221          2334555 77776   99999999999


Q ss_pred             eCCCCceEEEEeec-CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          127 QDGLQRRCLVFEFM-QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       127 ~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                      .+++.. ||+||-. ++-+|.+++..+. .+++..+..|++|++.|+++|   |+.||+|||||-+|+.++.+|-+||+|
T Consensus       639 Eddd~y-yl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hl---h~~~ivhrdikdenvivd~~g~~klid  713 (772)
T KOG1152|consen  639 EDDDYY-YLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHL---HDQGIVHRDIKDENVIVDSNGFVKLID  713 (772)
T ss_pred             ecCCee-EEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccc---cccCceecccccccEEEecCCeEEEee
Confidence            999666 9999976 4569999999887 899999999999999999999   666999999999999999999999999


Q ss_pred             cccccccCCCCC
Q 046594          206 FGAANYCSGGSN  217 (304)
Q Consensus       206 fgla~~~~~~~~  217 (304)
                      ||.|.....+.-
T Consensus       714 fgsaa~~ksgpf  725 (772)
T KOG1152|consen  714 FGSAAYTKSGPF  725 (772)
T ss_pred             ccchhhhcCCCc
Confidence            999987765543

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=6.6e-23  Score=170.25  Aligned_cols=220  Identities=19%  Similarity=0.192  Sum_probs=158.4

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH--hhCCCCCcccceeeeeeCCCCceE
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL--LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~--l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +...|.+.+.+|+|.||.+.+++++++   .+.+++|.+...... .+|.+|..  +-.-.|.||+.-++.-++..+.++
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s---~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv   98 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQS---KTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV   98 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCC---ceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence            356789999999999999999999865   489999998765433 37888887  444479999999887665556668


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-C-CCCeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-E-LCNAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~-~~~~kl~Dfgla~~~  212 (304)
                      +++||+|.|+|.+-+...+  +.+.-...++.|+++|++|+   |++++||||||.+||||- . ...+||||||+.+..
T Consensus        99 F~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fM---HsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen   99 FVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFM---HSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             EeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHh---hccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence            9999999999999888764  88999999999999999999   555899999999999993 3 348999999999876


Q ss_pred             CCCCC---C--ccccc-------Ccccc----cccccC-----------CCCc--ceeccccC----CC---CCCcc---
Q 046594          213 SGGSN---R--RNCEK-------TSEMA----EDINDF-----------VGGQ--ECLDQRLY----IP---NEKFK---  253 (304)
Q Consensus       213 ~~~~~---~--~~~~~-------~~~~s----~DV~S~-----------~~~~--~~~~~~~~----~~---~~~~~---  253 (304)
                      +....   .  +.+..       .+.+.    +|||.|           .+++  .+.|+...    +-   ....|   
T Consensus       174 g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F  253 (378)
T KOG1345|consen  174 GTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKF  253 (378)
T ss_pred             CceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhh
Confidence            54322   0  00000       22222    899992           2222  22222110    00   11112   


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      ...++.+..+-++-+.     +++++|-.+.++.++-
T Consensus       254 ~~fs~~a~r~Fkk~lt-----~~~~drcki~~~kk~r  285 (378)
T KOG1345|consen  254 NPFSEKALRLFKKSLT-----PRFKDRCKIWTAKKMR  285 (378)
T ss_pred             cccCHHHHHHHHHhcC-----CcccccchhHHHHHHH
Confidence            2235677788888999     9999996666655543

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3e-23  Score=177.03  Aligned_cols=205  Identities=18%  Similarity=0.185  Sum_probs=158.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH--hhCCCCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL--LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~--l~~l~h~niv~~~~~~~~~~~  131 (304)
                      +..|++++.||+|.|..|..++.+.+   .+.+|+|+++.+-..+     -.+.|..  -...+||.+|-++.+|... .
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t---~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte-s  324 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKT---DQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE-S  324 (593)
T ss_pred             cccceeeeeecCcchhhhhheehccc---ceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc-c
Confidence            45789999999999999999998754   5899999987643222     2223333  4556899999999998887 5


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+++|.||.+||+|--++.+.. +++++.+..+..+|+-||.||   |++||+.||||.+|+|+|..|.+||+|+|+++.
T Consensus       325 rlffvieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~fl---h~rgiiyrdlkldnvlldaeghikltdygmcke  400 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE  400 (593)
T ss_pred             eEEEEEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHH---hhcCeeeeeccccceEEccCCceeecccchhhc
Confidence            6699999999999988888777 899999999999999999999   555999999999999999999999999999986


Q ss_pred             cCCCC-C-CcccccCcccc------------ccccc-----------CCC---------Cc--------ceeccccCCCC
Q 046594          212 CSGGS-N-RRNCEKTSEMA------------EDIND-----------FVG---------GQ--------ECLDQRLYIPN  249 (304)
Q Consensus       212 ~~~~~-~-~~~~~~~~~~s------------~DV~S-----------~~~---------~~--------~~~~~~~~~~~  249 (304)
                      --... . .+.+|++.|++            .|.|+           ..+         ++        -++.+++    
T Consensus       401 ~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi----  476 (593)
T KOG0695|consen  401 GLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI----  476 (593)
T ss_pred             CCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc----
Confidence            54333 2 56677754444            78888           000         00        1223333    


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCC
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHP  281 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rp  281 (304)
                       .+|...+.....+++..|+     +||.+|.
T Consensus       477 -riprslsvkas~vlkgfln-----kdp~erl  502 (593)
T KOG0695|consen  477 -RIPRSLSVKASHVLKGFLN-----KDPKERL  502 (593)
T ss_pred             -cccceeehhhHHHHHHhhc-----CCcHHhc
Confidence             3455566777788899999     9999985

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.88  E-value=6.9e-22  Score=163.25  Aligned_cols=140  Identities=16%  Similarity=0.064  Sum_probs=108.1

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccch----------------------------hHHHHHHH-hhCCC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----------------------------TKLEEEIL-LKSSS  115 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----------------------------~~~~~e~~-l~~l~  115 (304)
                      .+.||+|++|.||++.+.    +|+.||||+++.....                            ..++.|.. +.++.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~----~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   77 (190)
T cd05145           2 NGCISTGKEANVYHARTG----DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY   77 (190)
T ss_pred             CceeecCCCcEEEEEEcC----CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999864    5899999998864211                            02345666 88888


Q ss_pred             CCcccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee
Q 046594          116 HLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL  195 (304)
Q Consensus       116 h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill  195 (304)
                      |+++.....+...  .. ++||||++++++........ .++......++.|++.++.++|+.  .||+||||||+|||+
T Consensus        78 ~~~i~~p~~~~~~--~~-~lVmE~~~g~~~~~~~l~~~-~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll  151 (190)
T cd05145          78 EAGVPVPEPILLK--KN-VLVMEFIGDDGSPAPRLKDV-PLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILY  151 (190)
T ss_pred             hCCCCCceEEEec--CC-EEEEEEecCCCchhhhhhhc-cCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEE
Confidence            9887554444332  23 89999999876544322222 688889999999999999999761  389999999999999


Q ss_pred             CCCCCeeEcccccccccCCC
Q 046594          196 DELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       196 ~~~~~~kl~Dfgla~~~~~~  215 (304)
                      + ++.++|+|||+++.....
T Consensus       152 ~-~~~~~liDFG~a~~~~~~  170 (190)
T cd05145         152 H-DGKPYIIDVSQAVELDHP  170 (190)
T ss_pred             E-CCCEEEEEcccceecCCC
Confidence            9 889999999999877543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.87  E-value=2e-22  Score=174.92  Aligned_cols=225  Identities=19%  Similarity=0.147  Sum_probs=171.9

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..|++..-.+-+|.||.||.+.++..  ..+.+.|.+|.++....+-   .+..|.. +..+.|||+.++.+++.+....
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~  362 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT  362 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence            45677788899999999999855422  2244678888887765554   4445555 8899999999999999877666


Q ss_pred             eEEEEeecCCCChhhHhhhcCC-------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG-------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~-------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                      .++++.++.-|+|..++....+       .+...+.+.++.|++.|++|||..   +++|.||..+|++||+.-++||+|
T Consensus       363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltD  439 (563)
T KOG1024|consen  363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTD  439 (563)
T ss_pred             ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEecc
Confidence            6999999999999999983321       577888999999999999999664   899999999999999999999999


Q ss_pred             cccccccCCCCCC--------ccccc------Ccccc--cccccCCC------------Ccc--------eeccccCCCC
Q 046594          206 FGAANYCSGGSNR--------RNCEK------TSEMA--EDINDFVG------------GQE--------CLDQRLYIPN  249 (304)
Q Consensus       206 fgla~~~~~~~~~--------~~~~~------~~~~s--~DV~S~~~------------~~~--------~~~~~~~~~~  249 (304)
                      =.+++.+.+....        +....      ...++  +|||||+-            ..+        .+....   +
T Consensus       440 saLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy---R  516 (563)
T KOG1024|consen  440 SALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY---R  516 (563)
T ss_pred             chhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc---e
Confidence            9999977655441        11000      34444  99999211            111        111122   3


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      -..|-+|++++..++.-||.     .+|++||++.|+..-|..+.
T Consensus       517 laQP~NCPDeLf~vMacCWa-----llpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  517 LAQPFNCPDELFTVMACCWA-----LLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             ecCCCCCcHHHHHHHHHHHh-----cCcccCCCHHHHHHHHHHHH
Confidence            45677899999999999999     99999999999998887654

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.85  E-value=2e-21  Score=170.13  Aligned_cols=146  Identities=21%  Similarity=0.202  Sum_probs=125.3

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceE
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+...|+..++||+|.|++||++.+.........||+|.+........+..|.. |..+ .+.||+++.+++..++.. .
T Consensus        33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v-~  111 (418)
T KOG1167|consen   33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV-A  111 (418)
T ss_pred             hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCee-E
Confidence            445678999999999999999998764322468999999998877777878888 7777 689999999999888555 9


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAGFGAAN  210 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~  210 (304)
                      +|+||+++....++...    ++...+..++..+..||+++   |..|||||||||+|+|.+. .+.-.|.|||+|.
T Consensus       112 ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~---h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  112 IVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHL---HKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             EEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhh---hccCccccCCCccccccccccCCceEEechhHH
Confidence            99999999888888874    67888999999999999999   5559999999999999984 5788999999997

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.84  E-value=8.6e-21  Score=155.34  Aligned_cols=152  Identities=18%  Similarity=0.138  Sum_probs=126.9

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCC-CcccceeeeeeCCCCceEE
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSH-LNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h-~niv~~~~~~~~~~~~~~l  135 (304)
                      +..+|++.++||.|+||.+|.+.+.   .+|..||||+-+......++.-|.. .+.+++ ..|..+..+..+.... .+
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i---~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~yn-vl   88 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISI---TSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYN-VL   88 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeec---cCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccc-ee
Confidence            3568999999999999999999875   5689999999988777776665555 777765 5677777777776555 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC---CCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL---CNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~---~~~kl~Dfgla~~~  212 (304)
                      |||.+ |.+|+++..-....++..+++-++-|++.-++|+|..   +++||||||+|+|+.-+   ..+.|+|||+|+.+
T Consensus        89 VMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen   89 VMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             eeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence            99999 7799999887766899999999999999999999665   79999999999999743   47999999999987


Q ss_pred             CCCCC
Q 046594          213 SGGSN  217 (304)
Q Consensus       213 ~~~~~  217 (304)
                      .+..+
T Consensus       165 ~d~~t  169 (341)
T KOG1163|consen  165 RDIRT  169 (341)
T ss_pred             ccccc
Confidence            65443

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.84  E-value=1e-20  Score=158.42  Aligned_cols=162  Identities=9%  Similarity=0.084  Sum_probs=121.4

Q ss_pred             HHHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--H---------HHHHHH-hhCCCCCcccce
Q 046594           55 TLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--K---------LEEEIL-LKSSSHLNIVTL  122 (304)
Q Consensus        55 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~---------~~~e~~-l~~l~h~niv~~  122 (304)
                      --++-.+|+..+.+|.|+||.||++..     ++..+|+|.+.......  .         ++.|+. +.+++|++|..+
T Consensus        26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~-----~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~  100 (232)
T PRK10359         26 DDFLSYNIKTIKVFRNIDDTKVSLIDT-----DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASL  100 (232)
T ss_pred             HHHhhCceEEEEEecCCCceEEEEEec-----CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcc
Confidence            345678999999999999999998654     25689999997654332  1         577777 999999999999


Q ss_pred             eeeeeCCC-------CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee
Q 046594          123 LGYPQDGL-------QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL  195 (304)
Q Consensus       123 ~~~~~~~~-------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill  195 (304)
                      ..++....       +..+|+|||++|.+|.++..     +++    ....+++.++..+|..   |++|||+||+||++
T Consensus       101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili  168 (232)
T PRK10359        101 NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIV  168 (232)
T ss_pred             eEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEE
Confidence            88865332       23489999999999988732     333    2456899998899654   89999999999999


Q ss_pred             CCCCCeeEcccccccccCCCCCCccccc--CcccccccccC
Q 046594          196 DELCNAKLAGFGAANYCSGGSNRRNCEK--TSEMAEDINDF  234 (304)
Q Consensus       196 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~--~~~~s~DV~S~  234 (304)
                      +.+| ++|+|||..+.............  ...+.+|+|++
T Consensus       169 ~~~g-i~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~l  208 (232)
T PRK10359        169 SKNG-LRIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDL  208 (232)
T ss_pred             eCCC-EEEEECCCcccccchhhHHHHHHHhHhcccccccce
Confidence            9988 99999998877654433111111  11245999984

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.83  E-value=1.3e-19  Score=154.57  Aligned_cols=149  Identities=20%  Similarity=0.188  Sum_probs=129.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEe
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      .|++.++||+|.||..+.....   -+++.||||.-.......+++-|+. .+.| ..++|...+-+...+... .||+|
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl---~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N-iLVid  104 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNL---YNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN-ILVID  104 (449)
T ss_pred             cceeccccccCcceeeeccccc---ccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchh-hhhhh
Confidence            7999999999999999987764   4679999998877666668988988 8777 568999988888777666 89999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-----CCeeEcccccccccC
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-----CNAKLAGFGAANYCS  213 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-----~~~kl~Dfgla~~~~  213 (304)
                      .+ |.||+|+..-.+..++.+++..++.|++.-++|+|+.   .+|.|||||+|+||...     ..+.++|||+|+.+.
T Consensus       105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence            99 7799999988888999999999999999999999775   59999999999999744     368999999999887


Q ss_pred             CCCC
Q 046594          214 GGSN  217 (304)
Q Consensus       214 ~~~~  217 (304)
                      +..+
T Consensus       181 Dp~T  184 (449)
T KOG1165|consen  181 DPKT  184 (449)
T ss_pred             Cccc
Confidence            6655

>PRK10345 hypothetical protein; Provisional

Probab=99.82  E-value=1.4e-19  Score=150.91  Aligned_cols=134  Identities=10%  Similarity=0.034  Sum_probs=101.1

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccc--hhHHHHHHH-hhCC-----CCCcccceeeeeeCCCC--c-
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--QTKLEEEIL-LKSS-----SHLNIVTLLGYPQDGLQ--R-  132 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~-l~~l-----~h~niv~~~~~~~~~~~--~-  132 (304)
                      -.+.||+|+||.||.  ++   .++. .+||+......  .+.+.+|+. ++.+     .||||++++|++.++.+  . 
T Consensus         6 ~~~~LG~G~~~~Vy~--hp---~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v   79 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HP---EDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV   79 (210)
T ss_pred             CcceecCCCceEEEE--CC---CCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence            356899999999995  43   2333 47998875422  236777777 8888     57999999999988742  3 


Q ss_pred             eEEEEee--cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHH-HHHhhcCCCCeeecCCCCCCeeeCC----CCCeeEcc
Q 046594          133 RCLVFEF--MQRGSLRWNLREKGGPLDWEKRLAIALQIDSAN-QMVCMYSKPPIYHGNITSDNILLDE----LCNAKLAG  205 (304)
Q Consensus       133 ~~lv~e~--~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l-~~Lh~~~~~~ivH~dlkp~Nill~~----~~~~kl~D  205 (304)
                      +.+|+||  +++|+|.+++.+.  .+++.  ..++.|++.++ +|||+.   +|+||||||+|||++.    ++.++|+|
T Consensus        80 ~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiD  152 (210)
T PRK10345         80 YDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCD  152 (210)
T ss_pred             EEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence            3478999  5579999999763  46655  35678888888 999765   7999999999999974    34799999


Q ss_pred             c-cccc
Q 046594          206 F-GAAN  210 (304)
Q Consensus       206 f-gla~  210 (304)
                      | |...
T Consensus       153 g~G~~~  158 (210)
T PRK10345        153 NIGEST  158 (210)
T ss_pred             CCCCcc
Confidence            4 5433

>smart00090 RIO RIO-like kinase

Probab=99.81  E-value=1.7e-19  Score=153.69  Aligned_cols=141  Identities=15%  Similarity=0.069  Sum_probs=106.7

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch--------------------------hHHHHHHH-hhCC
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--------------------------TKLEEEIL-LKSS  114 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~e~~-l~~l  114 (304)
                      |++.+.||+|++|.||++.+.  ..+|+.||+|.++.....                          ..++.|.. +.++
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~--~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDF--DGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             HHhCCeeccCcceeEEEEEec--CCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            789999999999999999722  136899999998754210                          12445666 7777


Q ss_pred             CCCc--ccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-eeecCCCCC
Q 046594          115 SHLN--IVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP-IYHGNITSD  191 (304)
Q Consensus       115 ~h~n--iv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~-ivH~dlkp~  191 (304)
                      .+.+  +.+++++   . .. ++||||+++++|........ .+.......++.|++.++++||..   | ++||||||+
T Consensus       108 ~~~~i~~p~~~~~---~-~~-~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~  178 (237)
T smart00090      108 YEAGVPVPKPIAW---R-RN-VLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEY  178 (237)
T ss_pred             HhcCCCCCeeeEe---c-Cc-eEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChh
Confidence            6532  3344432   2 34 89999999988876653333 566677789999999999999654   7 999999999


Q ss_pred             CeeeCCCCCeeEcccccccccCC
Q 046594          192 NILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       192 Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||+++ ++.++|+|||.+.....
T Consensus       179 NIli~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      179 NILVH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             hEEEE-CCCEEEEEChhhhccCC
Confidence            99999 88999999999876543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.81  E-value=1e-18  Score=156.11  Aligned_cols=225  Identities=18%  Similarity=0.137  Sum_probs=155.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCC----CCcccceeeeee-CCCCc
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSS----HLNIVTLLGYPQ-DGLQR  132 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~----h~niv~~~~~~~-~~~~~  132 (304)
                      +|++.+.||+|+||.||.+.+....  ...+|+|.........  .+.-|.. +..+.    .+++..+++... .....
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~--~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK--NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC--CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            7999999999999999999876432  3578999887653332  4444444 55554    368888888884 44345


Q ss_pred             eEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-----CCeeEccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-----CNAKLAGF  206 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-----~~~kl~Df  206 (304)
                       |+||+.+ |.+|.++..... +.++..++..++.|++.+|+++|+.   |++||||||+|+++...     ..+.|.||
T Consensus        97 -~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf  171 (322)
T KOG1164|consen   97 -FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF  171 (322)
T ss_pred             -EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence             9999999 669999886665 5899999999999999999999654   99999999999999854     46999999


Q ss_pred             cccc--ccCCCC------C----CcccccCcccc------------ccccc-----------CCCCcceec----cccCC
Q 046594          207 GAAN--YCSGGS------N----RRNCEKTSEMA------------EDIND-----------FVGGQECLD----QRLYI  247 (304)
Q Consensus       207 gla~--~~~~~~------~----~~~~~~~~~~s------------~DV~S-----------~~~~~~~~~----~~~~~  247 (304)
                      |+++  .+....      .    ....|+..+.+            .|+||           .-+++..-+    ..+..
T Consensus       172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~  251 (322)
T KOG1164|consen  172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEK  251 (322)
T ss_pred             CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHH
Confidence            9998  321111      0    12224422222            78999           112211000    00000


Q ss_pred             C-----CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          248 P-----NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       248 ~-----~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      .     ........+..+.++...+-.     .+-..+|....+.+.|+......
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~Pdy~~~~~~l~~~~~~~  301 (322)
T KOG1164|consen  252 DPRKLLTDRFGDLKPEEFAKILEYIDS-----LDYEDKPDYEKLAELLKDVFDSE  301 (322)
T ss_pred             HhhhhccccccCCChHHHHHHHHHhhc-----cCCcCCCCHHHHHHHHHHHHHhc
Confidence            0     000112234567777777777     88899999999999988776654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.81  E-value=2.2e-20  Score=155.55  Aligned_cols=216  Identities=18%  Similarity=0.207  Sum_probs=163.0

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      ...+|.+...|..|+.++.     |..+++|++....-    .+.|.+|.. |+-+.||||.+++|.|.... ++.++..
T Consensus       194 l~tkl~e~hsgelwrgrwq-----gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp-nlv~isq  267 (448)
T KOG0195|consen  194 LITKLAESHSGELWRGRWQ-----GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP-NLVIISQ  267 (448)
T ss_pred             hhhhhccCCCccccccccc-----CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC-CceEeee
Confidence            3456788889999988886     35566777654332    228999999 99999999999999999984 4499999


Q ss_pred             ecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc--ccccccccCCC
Q 046594          139 FMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA--GFGAANYCSGG  215 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~--Dfgla~~~~~~  215 (304)
                      ||+.|+|+.++++... ..+..++++++.++++|++|||+. ++-|..--|.+..+++|++.+++|.  |--++-.....
T Consensus       268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~gr  346 (448)
T KOG0195|consen  268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGR  346 (448)
T ss_pred             eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeecccc
Confidence            9999999999998866 678899999999999999999986 3445666799999999999887764  43332221111


Q ss_pred             CCCccccc-------Ccccc---ccccc--------------CC------CCcceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          216 SNRRNCEK-------TSEMA---EDIND--------------FV------GGQECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       216 ~~~~~~~~-------~~~~s---~DV~S--------------~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ...+....       +....   +|+||              |.      .+-++.-..+   +..+|+..+..+.+++.
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialegl---rv~ippgis~hm~klm~  423 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGL---RVHIPPGISRHMNKLMN  423 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccc---cccCCCCccHHHHHHHH
Confidence            11111111       22222   89999              11      1113334455   67788999999999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      -|+.     .||.+||.++.++-.||++.
T Consensus       424 icmn-----edpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  424 ICMN-----EDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HHhc-----CCCCcCCCcceehhhHHHhc
Confidence            9999     99999999999999999874

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.80  E-value=5e-19  Score=148.86  Aligned_cols=147  Identities=31%  Similarity=0.349  Sum_probs=127.0

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      |+..+.+|.|++|.||++....   ++..+++|........   ..+..|.. +++++|+|++++++++...... ++++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~-~~v~   76 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKG---TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPL-YLVM   76 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcC---CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCce-EEEE
Confidence            5667889999999999998753   4689999999876543   37777777 9999999999999998877444 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||+++++|.+++......+++.....++.+++.++.+||..   +++|+|++|+||+++.++.++|+|||.+......
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            99999999999987652389999999999999999999764   8999999999999999999999999998877554

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.80  E-value=5.1e-20  Score=182.93  Aligned_cols=169  Identities=17%  Similarity=0.100  Sum_probs=109.7

Q ss_pred             hCCCC-CcccceeeeeeCC------CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 046594          112 KSSSH-LNIVTLLGYPQDG------LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIY  184 (304)
Q Consensus       112 ~~l~h-~niv~~~~~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~iv  184 (304)
                      +.++| .||.+++++|..+      ...+++++||+ +++|.+++......+++..++.++.||++||+|||+   +||+
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~gIv  102 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHS---QGIV  102 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHh---CCee
Confidence            45567 6888888887222      13457888988 459999998655579999999999999999999964   4899


Q ss_pred             ecCCCCCCeeeCC-------------------CCCeeEcccccccccCCCC--------C----------Cccccc----
Q 046594          185 HGNITSDNILLDE-------------------LCNAKLAGFGAANYCSGGS--------N----------RRNCEK----  223 (304)
Q Consensus       185 H~dlkp~Nill~~-------------------~~~~kl~Dfgla~~~~~~~--------~----------~~~~~~----  223 (304)
                      ||||||+||||+.                   ++.+|++|||+++......        .          ....++    
T Consensus       103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  182 (793)
T PLN00181        103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT  182 (793)
T ss_pred             eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence            9999999999954                   4567777777776432100        0          001111    


Q ss_pred             ------Ccccc--ccccc-----------CCCCc---ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCC
Q 046594          224 ------TSEMA--EDIND-----------FVGGQ---ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHP  281 (304)
Q Consensus       224 ------~~~~s--~DV~S-----------~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rp  281 (304)
                            ...++  +||||           +++..   ..+....................+++.+||.     +||.+||
T Consensus       183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-----~~P~~Rp  257 (793)
T PLN00181        183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLH-----PEPSCRP  257 (793)
T ss_pred             ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCC-----CChhhCc
Confidence                  11122  89999           11111   0100000000011111123456788899999     9999999


Q ss_pred             CHHHHHHH
Q 046594          282 KIVDVLSG  289 (304)
Q Consensus       282 s~~~vl~~  289 (304)
                      ++.|+++|
T Consensus       258 s~~eil~h  265 (793)
T PLN00181        258 SMSELLQS  265 (793)
T ss_pred             ChHHHhhc
Confidence            99999874

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.77  E-value=2.4e-18  Score=144.36  Aligned_cols=132  Identities=17%  Similarity=0.187  Sum_probs=107.0

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch----------hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----------TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +.||+|++|.||++.+     +|..+++|........          ..+..|.. +..+.|+++.....++...+.. +
T Consensus         2 ~~l~~G~~~~vy~~~~-----~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~-~   75 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-----LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENF-I   75 (211)
T ss_pred             cccccCceEEEEEEee-----CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCC-E
Confidence            5789999999999876     3578899976532211          14556666 8888999988777777666555 9


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ++|||++|++|.+++....    + .+..++.+++.+|.++|..   +++|||++|+|||++ ++.++|+|||.+...
T Consensus        76 lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879         76 IVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             EEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence            9999999999999987543    2 7889999999999999654   899999999999999 789999999998763

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.76  E-value=7.6e-18  Score=138.54  Aligned_cols=129  Identities=14%  Similarity=0.053  Sum_probs=100.6

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccchh------HHHHHHH-hhCCC-CCcccceeeeeeCCCCceEE
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT------KLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~l  135 (304)
                      ....|++|+||+|+.+..     .+..++.+.+.......      .++.|+. |+++. |+++.+++++    +.. ++
T Consensus         6 ~~~~l~~~~f~~v~~~~~-----~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~-~l   75 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-----GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGR-HL   75 (218)
T ss_pred             cceeecCCCcceEEEeec-----CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCE-EE
Confidence            456789999999996654     45778877776554421      4677888 99995 5889999886    234 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC-CCCCeeeCCCCCeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNI-TSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dl-kp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +|||++|.+|.+.+..        ....++.|++.+|+++|..   ||+|||| ||+|||++.++.++|+|||+|....
T Consensus        76 vmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         76 DRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             EEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            9999999898754321        1235788999999999654   8999999 7999999999999999999997543

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.75  E-value=6e-18  Score=160.95  Aligned_cols=133  Identities=17%  Similarity=0.172  Sum_probs=103.1

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccc--c---c-----hhHHHHHHH-hhCCCCCcccceeeeeeCCC
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYM--A---S-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGL  130 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~--~---~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~  130 (304)
                      |...+.||+|+||.||++.+.+     ..+++|+....  .   .     ...+..|.. ++.++|++++....++....
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~-----~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLG-----RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE  409 (535)
T ss_pred             cCccceeccCCcEEEEEEeecC-----ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence            3446789999999999977642     23333332111  1   0     125667777 99999999998877777665


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      .. ++||||+++++|.+++.         ....++.|++.+|.|||+.   +++||||||+|||+ .++.++|+|||+++
T Consensus       410 ~~-~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~  475 (535)
T PRK09605        410 EK-TIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK  475 (535)
T ss_pred             CC-EEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence            55 89999999999998875         3467899999999999664   89999999999999 57799999999998


Q ss_pred             ccC
Q 046594          211 YCS  213 (304)
Q Consensus       211 ~~~  213 (304)
                      ...
T Consensus       476 ~~~  478 (535)
T PRK09605        476 YSD  478 (535)
T ss_pred             cCC
Confidence            753

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.74  E-value=1.4e-17  Score=138.38  Aligned_cols=134  Identities=16%  Similarity=0.122  Sum_probs=101.5

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch------------------------hHHHHHHH-hhCCCC
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ------------------------TKLEEEIL-LKSSSH  116 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~e~~-l~~l~h  116 (304)
                      |.+.+.||+|+||.||++...    +|+.+|||+.......                        .....|.. +..+.|
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   92 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP----DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE   92 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC----CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence            778899999999999988653    6899999987643210                        02345555 777777


Q ss_pred             Cc--ccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          117 LN--IVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       117 ~n--iv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      ++  +.+.++.    ... +++|||+++++|.+....       .....++.+++.++.++|+   .|++||||||+||+
T Consensus        93 ~~i~v~~~~~~----~~~-~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nil  157 (198)
T cd05144          93 EGFPVPKPIDW----NRH-AVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNIL  157 (198)
T ss_pred             cCCCCCceeec----CCc-eEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEE
Confidence            64  3344332    234 899999999999765431       3346788999999999976   48999999999999


Q ss_pred             eCCCCCeeEcccccccccCC
Q 046594          195 LDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~  214 (304)
                      ++.++.++|+|||++.....
T Consensus       158 l~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         158 VDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             EcCCCcEEEEECCccccCCC
Confidence            99999999999999965544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.74  E-value=1.1e-17  Score=139.08  Aligned_cols=128  Identities=18%  Similarity=0.229  Sum_probs=100.0

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccc---h-------hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---Q-------TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---~-------~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .||+|++|.||++.+     ++..+++|.......   .       ..+..|.. ++.++|+++.....++...+.. ++
T Consensus         1 ~ig~G~~~~vy~~~~-----~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~-~l   74 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-----LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNK-TI   74 (199)
T ss_pred             CCCCCceEEEEEeec-----CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC-EE
Confidence            379999999999985     357899998653221   1       14556777 8888888766555555555444 89


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|||++|++|.+.+.... .       .++.+++.+|.+||.   .+++|||++|+||+++ ++.++++|||++...
T Consensus        75 v~e~~~g~~l~~~~~~~~-~-------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        75 VMEYIEGKPLKDVIEEGN-D-------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             EEEEECCccHHHHHhhcH-H-------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            999999999998876532 1       789999999999965   4899999999999999 889999999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=3.6e-18  Score=162.69  Aligned_cols=215  Identities=17%  Similarity=0.088  Sum_probs=146.7

Q ss_pred             Hhh-ccccccCCccccceeeecceeecCCCcEEEEEEec----cccchh----HHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           60 KRR-RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARR----YMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        60 ~~~-~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~----~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      ++| ...+.+|.|++|.++.+.....   ....+.|...    ......    .+..|+. -..+.|+|++..+..+.+.
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~---~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~  393 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSD---LKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI  393 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCC---CccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc
Confidence            445 4567889999997766554322   2333333322    212222    2445555 6778999999988888777


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ... .-.||||++ +|..++.... .+....+..++.|++.|++|+|..   |+.|||+|++|++++.+|.+||+|||.+
T Consensus       394 ~~~-~~~mE~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~  467 (601)
T KOG0590|consen  394 DGI-LQSMEYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAA  467 (601)
T ss_pred             ccc-hhhhhcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcc
Confidence            555 455999999 9999998874 688899999999999999999665   9999999999999999999999999988


Q ss_pred             cccCCCCC------CcccccCc----------ccc---ccccc-----------CCCCc--ceecc-----------ccC
Q 046594          210 NYCSGGSN------RRNCEKTS----------EMA---EDIND-----------FVGGQ--ECLDQ-----------RLY  246 (304)
Q Consensus       210 ~~~~~~~~------~~~~~~~~----------~~s---~DV~S-----------~~~~~--~~~~~-----------~~~  246 (304)
                      ........      ...++..+          .+.   .||||           .-.+.  ..-|.           ...
T Consensus       468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~  547 (601)
T KOG0590|consen  468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIF  547 (601)
T ss_pred             eeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccc
Confidence            75532221      23333322          222   89999           00011  00000           000


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      ..........+.+.+.++-++|+     .||.+|.|+.+|++
T Consensus       548 ~~~~~~~~~lp~~~~~~~~~~l~-----~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  548 EGPNRLLSLLPRETRIIIYRMLQ-----LDPTKRITIEQILN  584 (601)
T ss_pred             cChHHHHHhchhhHHHHHHHHcc-----CChhheecHHHHhh
Confidence            00111223445678899999999     99999999999986

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.72  E-value=3.8e-17  Score=159.55  Aligned_cols=222  Identities=16%  Similarity=0.133  Sum_probs=149.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHH--HHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL--EEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~--~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .+|.+.+.+|+|+||.||.+...    +|+.||+|+-+.....+.+  .+... |+-.--+.|+++..++...+.. +||
T Consensus       698 ~~~~I~~e~G~g~y~~vy~a~~~----~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S-~lv  772 (974)
T KOG1166|consen  698 EKFCISKEIGEGSYGSVYVATHS----NGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNAS-VLV  772 (974)
T ss_pred             eeEEEEeeeccccceEEEEeecC----CCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcc-eee
Confidence            45778889999999999999875    4899999999988887722  11112 4422235567777766666566 899


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-------CCCCeeEcccccc
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-------ELCNAKLAGFGAA  209 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-------~~~~~kl~Dfgla  209 (304)
                      +||.+.|+|.+++...+ .++|..++.++.|+++.++.||..   +|||+||||+|+||.       .+.-++|+|||.+
T Consensus       773 ~ey~~~Gtlld~~N~~~-~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s  848 (974)
T KOG1166|consen  773 SEYSPYGTLLDLINTNK-VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS  848 (974)
T ss_pred             eeccccccHHHhhccCC-CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence            99999999999999555 899999999999999999999765   799999999999994       2346999999988


Q ss_pred             ccc---CCCCC-Cccccc------------Cccccccccc---------CCCCcceeccccCCCCCCcchHHHHH-HHHH
Q 046594          210 NYC---SGGSN-RRNCEK------------TSEMAEDIND---------FVGGQECLDQRLYIPNEKFKITSLAK-LGDI  263 (304)
Q Consensus       210 ~~~---~~~~~-~~~~~~------------~~~~s~DV~S---------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~l  263 (304)
                      -.+   .++.. ...+.+            ++.|..|-|.         |+..-+..+...+.....+++..-.. ..++
T Consensus       849 iDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~~~g~~~~~~~~~~Ry~~~~~W~~~  928 (974)
T KOG1166|consen  849 IDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEVKNGSSWMVKTNFPRYWKRDMWNKF  928 (974)
T ss_pred             eeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHhcCCcceeccccchhhhhHHHHHHH
Confidence            543   22211 111111            4444466665         32222322222211112223222222 3355


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ....|.     .|-..=|...++...|+....
T Consensus       929 F~~lLN-----~~~~~~p~l~~lr~~~~~~~~  955 (974)
T KOG1166|consen  929 FDLLLN-----PDCDTLPNLQELRTELEEVLA  955 (974)
T ss_pred             HHHHhC-----cCcccchhHHHHHHHHHHHHH
Confidence            566677     677777777877777766543

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.71  E-value=1.2e-16  Score=125.93  Aligned_cols=136  Identities=17%  Similarity=0.178  Sum_probs=111.1

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCC--CcccceeeeeeCCCCceEEEEeec
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSH--LNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h--~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      +.+.+|+|.++.||++...     +..+++|..........+..|.. ++.++|  .++.+++++....+.. ++++||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~-----~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~-~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK-----DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWS-YLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEec-----CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCcc-EEEEEec
Confidence            3567999999999998864     36899999876544345666777 888866  5888888888776445 9999999


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      +++.+..+        +......++.+++++|+++|..+..+++|+|++|+||+++.++.+++.|||.+....
T Consensus        76 ~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          76 EGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             CCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence            98877654        556677889999999999998777789999999999999998999999999987543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.69  E-value=2.1e-16  Score=128.49  Aligned_cols=137  Identities=21%  Similarity=0.101  Sum_probs=95.6

Q ss_pred             CChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCCCcccc
Q 046594          143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCE  222 (304)
Q Consensus       143 gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~  222 (304)
                      |+|.+++...+.++++.+++.++.|++.||+|||+.   +      ||+|||++.++.+++  ||++..........+..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~   69 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPY   69 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccCCCccc
Confidence            699999987665799999999999999999999765   3      999999999999999  99998765433321111


Q ss_pred             c-------Ccccc--ccccc-----------CCCCc----------ceeccccCC-CC-CCcchHHHH--HHHHHHHHhc
Q 046594          223 K-------TSEMA--EDIND-----------FVGGQ----------ECLDQRLYI-PN-EKFKITSLA--KLGDIEKWCI  268 (304)
Q Consensus       223 ~-------~~~~s--~DV~S-----------~~~~~----------~~~~~~~~~-~~-~~~~~~~~~--~l~~l~~~cl  268 (304)
                      +       ...++  +||||           ..+..          .+....... +. ...+.....  .+.+++.+||
T Consensus        70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl  149 (176)
T smart00750       70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA  149 (176)
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence            1       22222  99999           11111          000000000 00 011222333  6999999999


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          269 SCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      .     .||.+||++.++++++..+..
T Consensus       150 ~-----~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750      150 S-----RLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             h-----cccccccCHHHHHHHHHHHHH
Confidence            9     999999999999999977643

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.69  E-value=1.2e-16  Score=146.47  Aligned_cols=178  Identities=23%  Similarity=0.247  Sum_probs=132.1

Q ss_pred             hhCCCCCcccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 046594          111 LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITS  190 (304)
Q Consensus       111 l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp  190 (304)
                      |+.+.|.|+.+++|.+.++ ...+.|.+||+.|+|.+.+......+++.....++++++.||+|||..  +...|+.+++
T Consensus         1 l~~l~h~n~~~f~g~~~~~-~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDG-PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecC-CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC--cceeeeeecc
Confidence            4678999999999999999 555999999999999999998776899999999999999999999854  2339999999


Q ss_pred             CCeeeCCCCCeeEcccccccccCCCC-----C---Cccccc----------Ccc---cc--ccccc--------------
Q 046594          191 DNILLDELCNAKLAGFGAANYCSGGS-----N---RRNCEK----------TSE---MA--EDIND--------------  233 (304)
Q Consensus       191 ~Nill~~~~~~kl~Dfgla~~~~~~~-----~---~~~~~~----------~~~---~s--~DV~S--------------  233 (304)
                      +|+++|..+.+||+|||+........     .   .....+          ...   .+  .||||              
T Consensus        78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            99999999999999999988774210     0   000000          111   23  89999              


Q ss_pred             CCCCc------ceecc----ccCCCCCCcc-h-HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          234 FVGGQ------ECLDQ----RLYIPNEKFK-I-TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       234 ~~~~~------~~~~~----~~~~~~~~~~-~-~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      |+...      +++.+    .....++... . +..+.+..++.+||.     .+|.+||++.++-..++.+...
T Consensus       158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~-----e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWE-----EIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcc-----cChhhCccHHHHHhhhhhhccc
Confidence            11111      12211    1000112221 1 334468999999999     9999999999999988877654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.68  E-value=1.5e-16  Score=130.85  Aligned_cols=135  Identities=21%  Similarity=0.160  Sum_probs=92.3

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HH----------------------HHHHH-hhCCCCC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KL----------------------EEEIL-LKSSSHL  117 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~----------------------~~e~~-l~~l~h~  117 (304)
                      .+.||+|+||.||.+...    +++.||||+........    .+                      ..+.. +..+.+.
T Consensus         2 ~~~lg~G~~g~Vy~a~~~----~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~   77 (187)
T cd05119           2 GGPIGTGKEADVYLALDG----DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA   77 (187)
T ss_pred             CcccccccceeEEEEECC----CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence            467999999999998764    57899999987543211    11                      12222 3333222


Q ss_pred             c--ccceeeeeeCCCCceEEEEeecCCCChhh-HhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          118 N--IVTLLGYPQDGLQRRCLVFEFMQRGSLRW-NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       118 n--iv~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      +  +.+.+++    ... +++|||++++++.. .+....  .. .....++.+++.++.++|..  .+++||||||+||+
T Consensus        78 ~~~~~~~~~~----~~~-~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nil  147 (187)
T cd05119          78 GVPVPKPIDL----NRH-VLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNIL  147 (187)
T ss_pred             CCCCCceEec----CCC-EEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEE
Confidence            1  2333332    123 89999999865432 222111  11 66788999999999999652  48999999999999


Q ss_pred             eCCCCCeeEcccccccccCC
Q 046594          195 LDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~  214 (304)
                      ++ ++.++|+|||.+.....
T Consensus       148 i~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         148 VD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             EE-CCcEEEEECcccccccC
Confidence            99 89999999999976654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.65  E-value=1.6e-15  Score=129.43  Aligned_cols=134  Identities=18%  Similarity=0.102  Sum_probs=98.8

Q ss_pred             ccccC-CccccceeeecceeecCCCcEEEEEEeccccc---------------hhHHHHHHH-hhCCCCCcc--cceeee
Q 046594           65 LKSFG-DSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---------------QTKLEEEIL-LKSSSHLNI--VTLLGY  125 (304)
Q Consensus        65 ~~~lg-~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---------------~~~~~~e~~-l~~l~h~ni--v~~~~~  125 (304)
                      ...+| .|+.|++|.....     +..++||.......               ...+..|+. +..++|+++  ++.+++
T Consensus        36 ~~~lg~~~g~gtv~~v~~~-----~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~  110 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP-----GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAA  110 (239)
T ss_pred             CceeecCCCCccEEEEEeC-----CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEee
Confidence            34577 7888888887653     57888888753210               114556777 889988875  667776


Q ss_pred             eeCCCCc---eEEEEeecCC-CChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCe
Q 046594          126 PQDGLQR---RCLVFEFMQR-GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA  201 (304)
Q Consensus       126 ~~~~~~~---~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~  201 (304)
                      .......   .++|+|++++ .+|.+++...  .++...    +.+++.+|.+||+.   ||+||||||+|||++.++.+
T Consensus       111 ~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~~----~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v  181 (239)
T PRK01723        111 RVVRHGLFYRADILIERIEGARDLVALLQEA--PLSEEQ----WQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKF  181 (239)
T ss_pred             eeeecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHHH----HHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCE
Confidence            5443222   2599999997 6899888653  455543    56899999999654   89999999999999998999


Q ss_pred             eEccccccccc
Q 046594          202 KLAGFGAANYC  212 (304)
Q Consensus       202 kl~Dfgla~~~  212 (304)
                      +|+|||.+...
T Consensus       182 ~LIDfg~~~~~  192 (239)
T PRK01723        182 WLIDFDRGELR  192 (239)
T ss_pred             EEEECCCcccC
Confidence            99999988664

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=3.2e-15  Score=130.87  Aligned_cols=166  Identities=18%  Similarity=0.123  Sum_probs=117.4

Q ss_pred             CCCcccceeeeeeCC--------------------------CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHH
Q 046594          115 SHLNIVTLLGYPQDG--------------------------LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQI  168 (304)
Q Consensus       115 ~h~niv~~~~~~~~~--------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi  168 (304)
                      +|||||++.++|.+.                          +..+|+||..++. +|.+++-.+.  .+.....-++.|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence            599999999887541                          1346999999977 9999998764  6777788899999


Q ss_pred             HHHHHHHhhcCCCCeeecCCCCCCeeeC--CC--CCeeEcccccccccCCCC------C-Cccccc-------------C
Q 046594          169 DSANQMVCMYSKPPIYHGNITSDNILLD--EL--CNAKLAGFGAANYCSGGS------N-RRNCEK-------------T  224 (304)
Q Consensus       169 ~~~l~~Lh~~~~~~ivH~dlkp~Nill~--~~--~~~kl~Dfgla~~~~~~~------~-~~~~~~-------------~  224 (304)
                      ++|+.|||.+   ||.|||+|++|||+.  +|  ..++++|||.+-......      + ....|.             +
T Consensus       351 LEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P  427 (598)
T KOG4158|consen  351 LEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP  427 (598)
T ss_pred             HHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence            9999999664   899999999999994  33  368899999764332200      0 111111             2


Q ss_pred             ccc-----c-ccccc---------------CCCCcceeccccCCC--CCCcchHHHHHHHHHHHHhccccCCCCCCCCCC
Q 046594          225 SEM-----A-EDIND---------------FVGGQECLDQRLYIP--NEKFKITSLAKLGDIEKWCISCCSNIEGNENHP  281 (304)
Q Consensus       225 ~~~-----s-~DV~S---------------~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rp  281 (304)
                      +..     . +|.|+               +..++..++.+.++.  ....|..+++.+.+++-..|+     +||.+|+
T Consensus       428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~-----r~pskRv  502 (598)
T KOG4158|consen  428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLK-----RDPSKRV  502 (598)
T ss_pred             CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhc-----CCccccC
Confidence            222     2 89998               333444444333211  134567778889999999999     9999999


Q ss_pred             CHHHHHHHHH
Q 046594          282 KIVDVLSGLK  291 (304)
Q Consensus       282 s~~~vl~~L~  291 (304)
                      +..-..+.|+
T Consensus       503 sp~iAANvl~  512 (598)
T KOG4158|consen  503 SPNIAANVLN  512 (598)
T ss_pred             CccHHHhHHH
Confidence            9876666554

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.58  E-value=1.5e-14  Score=127.25  Aligned_cols=143  Identities=34%  Similarity=0.403  Sum_probs=119.6

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCC-cccceeeeeeCCCCceE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHL-NIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~-niv~~~~~~~~~~~~~~  134 (304)
                      |+..+.+|.|+||.||.+.+.      ..+++|.+......     ..+..+.. ++.+.|+ +++++.+.+..... .+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~-~~   74 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGS-LY   74 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCE-EE
Confidence            677889999999999998875      67888888765432     25667777 9999888 79999999966544 49


Q ss_pred             EEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~~  211 (304)
                      ++++++.++++.+++.....  .+.......++.|++.++.|+|..   +++|||+||+||+++..+ .++++|||+++.
T Consensus        75 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~  151 (384)
T COG0515          75 LVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKL  151 (384)
T ss_pred             EEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence            99999999999977776542  689999999999999999999654   799999999999999988 799999999875


Q ss_pred             cCC
Q 046594          212 CSG  214 (304)
Q Consensus       212 ~~~  214 (304)
                      ...
T Consensus       152 ~~~  154 (384)
T COG0515         152 LPD  154 (384)
T ss_pred             cCC
Confidence            543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.54  E-value=2.1e-15  Score=145.96  Aligned_cols=212  Identities=18%  Similarity=0.118  Sum_probs=148.0

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh------HHHHHHHhhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT------KLEEEILLKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+...+.+|.+.|=.|.++.++    +|. |+||++-.....-      +..+++....++|||.+++.-+-...... |
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~----eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAA-y   97 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR----EGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAA-Y   97 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC----Cce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHH-H
Confidence            4667789999999999888875    444 9999987654322      22233336667999999988776655445 8


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||=+|..+ +|+|.+..++ -+...+.+-|+.|++.||.-+   |+.||.|||||.+||||+..+.+.|+||..-+..--
T Consensus        98 lvRqyvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qc---H~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYL  172 (1431)
T KOG1240|consen   98 LVRQYVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQC---HKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYL  172 (1431)
T ss_pred             HHHHHHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHH---HHcCccccccccceEEEeeechhhhhcccccCCccC
Confidence            89999977 9999998876 677788888999999997777   556999999999999999999999999986554321


Q ss_pred             CCC--------Cccccc----------------------Ccccc--ccccc--------CCCCcce------eccccCCC
Q 046594          215 GSN--------RRNCEK----------------------TSEMA--EDIND--------FVGGQEC------LDQRLYIP  248 (304)
Q Consensus       215 ~~~--------~~~~~~----------------------~~~~s--~DV~S--------~~~~~~~------~~~~~~~~  248 (304)
                      ...        ..+...                      .+..+  -||||        |-++...      +.-+-   
T Consensus       173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~---  249 (1431)
T KOG1240|consen  173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRS---  249 (1431)
T ss_pred             CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhc---
Confidence            111        000000                      11122  68888        3222211      11110   


Q ss_pred             CCCcch------HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          249 NEKFKI------TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       249 ~~~~~~------~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                      .+....      -+...+++++..|++     .||.+|-++++.|+.-.
T Consensus       250 ~~~~~~e~~Le~Ied~~~Rnlil~Mi~-----rdPs~RlSAedyL~~yr  293 (1431)
T KOG1240|consen  250 GNADDPEQLLEKIEDVSLRNLILSMIQ-----RDPSKRLSAEDYLQKYR  293 (1431)
T ss_pred             cCccCHHHHHHhCcCccHHHHHHHHHc-----cCchhccCHHHHHHhhh
Confidence            011111      122468899999999     99999999999998744

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.54  E-value=1.5e-15  Score=139.86  Aligned_cols=203  Identities=16%  Similarity=0.090  Sum_probs=153.3

Q ss_pred             cCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCC-CCcccceeeeeeCCCCceEEEEeecC
Q 046594           68 FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        68 lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      +|+|.||.|++++..+....|..+|.|+++......    ....+.. +...+ ||.++++...++.+. .++++++|..
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~-kl~l~ld~~r   80 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG-KLYLILDFLR   80 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc-chhHhhhhcc
Confidence            699999999998766655677889999887543322    2223333 66665 999999999888874 4499999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCCCccc
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNC  221 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  221 (304)
                      +|.|...+.... .+.+.....+...++-+++++|..   +++|||+|++||+++.+|.+++.|||+++..-.....  +
T Consensus        81 gg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--c  154 (612)
T KOG0603|consen   81 GGDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--C  154 (612)
T ss_pred             cchhhhccccCC-chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--c
Confidence            999998888776 788888889999999999999554   8999999999999999999999999999877544332  3


Q ss_pred             cc---------C-cccccccccCCCCc------------ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCC
Q 046594          222 EK---------T-SEMAEDINDFVGGQ------------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNEN  279 (304)
Q Consensus       222 ~~---------~-~~~s~DV~S~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~  279 (304)
                      |+         . ...++|-||+....            +++...+ ......|......+.+++.+.+.     .+|..
T Consensus       155 gt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il-~~~~~~p~~l~~~a~~~~~~l~~-----r~p~n  228 (612)
T KOG0603|consen  155 GTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGGDTMKRIL-KAELEMPRELSAEARSLFRQLFK-----RNPEN  228 (612)
T ss_pred             cchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCchHHHHHHh-hhccCCchhhhHHHHHHHHHHHh-----hCHHH
Confidence            33         2 22238999922211            2222222 11345677888889999999999     99999


Q ss_pred             CCCH
Q 046594          280 HPKI  283 (304)
Q Consensus       280 Rps~  283 (304)
                      |--.
T Consensus       229 rLg~  232 (612)
T KOG0603|consen  229 RLGA  232 (612)
T ss_pred             Hhcc
Confidence            9754

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.51  E-value=1.4e-13  Score=127.45  Aligned_cols=139  Identities=19%  Similarity=0.103  Sum_probs=92.6

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh------------------------------------------
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT------------------------------------------  103 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------------  103 (304)
                      +.+|.|++|.||++..    .+|+.||||+.+......                                          
T Consensus       123 ~plasaSigQVh~A~l----~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  198 (437)
T TIGR01982       123 KPLAAASIAQVHRARL----VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL  198 (437)
T ss_pred             cceeeeehhheEEEEe----cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence            5799999999998875    478999999987643211                                          


Q ss_pred             HHHHHHH-hhCC----CCCcccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHH-HHHHhh
Q 046594          104 KLEEEIL-LKSS----SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSA-NQMVCM  177 (304)
Q Consensus       104 ~~~~e~~-l~~l----~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~-l~~Lh~  177 (304)
                      .|..|.. +.++    +|.+-+.+-..+.+-....+|||||++|++|.+.........+   ...++.+++.. +..+  
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql--  273 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQV--  273 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHH--
Confidence            1222222 2222    2333333333332222223899999999999987654321232   33455555553 4445  


Q ss_pred             cCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          178 YSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       178 ~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                       |..|++|+|+||.||+++.+++++++|||++..+..
T Consensus       274 -~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       274 -LRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             -HhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence             455999999999999999999999999999987754

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.48  E-value=2.1e-13  Score=110.13  Aligned_cols=130  Identities=14%  Similarity=0.036  Sum_probs=93.2

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccc-eeeeeeCCCCceEEEEeecC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVT-LLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~-~~~~~~~~~~~~~lv~e~~~  141 (304)
                      .+.++.|.++.+|+....     +..+++|........ ..++.|.. ++.+.+.++++ ++.+. . ... ++||||++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-----~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~-~~~-~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-----NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-P-ETG-VLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEEC-----CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-C-CCC-eEEEEecC
Confidence            467899999999988753     578999998665422 24556666 77776555554 44433 2 234 89999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS--KPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~--~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |.++.+.  .   ..    ...++.+++++|+.||...  ..+++|+|++|.||+++ ++.++++|||.+...
T Consensus        75 G~~l~~~--~---~~----~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~  137 (170)
T cd05151          75 GSELLTE--D---FS----DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN  137 (170)
T ss_pred             CCccccc--c---cc----CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence            9888653  0   11    1245678999999997653  23469999999999999 678999999988653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.46  E-value=4.4e-13  Score=115.92  Aligned_cols=202  Identities=18%  Similarity=0.168  Sum_probs=120.1

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCC----------Ccccceeee
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSH----------LNIVTLLGY  125 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h----------~niv~~~~~  125 (304)
                      .+..+.||.|+++.||.+.+..   .++.+|||.........     .+++|.. ...+.+          -.++-.++.
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~---t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~   90 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVE---TGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL   90 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETT---TTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred             EEEccccccCCceEEEEEEEcc---CCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence            3456789999999999999874   47999999987554322     6777776 555433          112222221


Q ss_pred             e---------eCCC--C-----ceEEEEeecCCCChhhHhhh---cCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046594          126 P---------QDGL--Q-----RRCLVFEFMQRGSLRWNLRE---KGG---PLDWEKRLAIALQIDSANQMVCMYSKPPI  183 (304)
Q Consensus       126 ~---------~~~~--~-----~~~lv~e~~~~gsL~~~l~~---~~~---~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i  183 (304)
                      .         ....  +     ..+++|+-+.. ||.+++..   ...   .+....+..+..|+++.+++||..   |+
T Consensus        91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---Gl  166 (288)
T PF14531_consen   91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GL  166 (288)
T ss_dssp             EEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             EEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ce
Confidence            1         1110  1     12678888854 99887543   221   234455677789999999999765   89


Q ss_pred             eecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Cccccc--------C-------cccc--ccccc-----------
Q 046594          184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RRNCEK--------T-------SEMA--EDIND-----------  233 (304)
Q Consensus       184 vH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~--------~-------~~~s--~DV~S-----------  233 (304)
                      +|+||+|+|+|++.+|.++|+||+.....+....  ....+.        .       -.++  .|.|+           
T Consensus       167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~  246 (288)
T PF14531_consen  167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG  246 (288)
T ss_dssp             EEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred             EecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence            9999999999999999999999987655433222  001111        0       1223  78888           


Q ss_pred             ---CCCCcceecc--ccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCC
Q 046594          234 ---FVGGQECLDQ--RLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENH  280 (304)
Q Consensus       234 ---~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~R  280 (304)
                         |+......+.  .+    .... +.++.+..||..+|+     +||.+|
T Consensus       247 ~lPf~~~~~~~~~~~~f----~~C~-~~Pe~v~~LI~~lL~-----~~~~~R  288 (288)
T PF14531_consen  247 RLPFGLSSPEADPEWDF----SRCR-DMPEPVQFLIRGLLQ-----RNPEDR  288 (288)
T ss_dssp             S-STCCCGGGSTSGGGG----TTSS----HHHHHHHHHHT------SSGGGS
T ss_pred             cCCCCCCCccccccccc----hhcC-CcCHHHHHHHHHHcc-----CCcccC
Confidence               2211211111  23    2333 778899999999999     999988

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.40  E-value=1.4e-12  Score=122.54  Aligned_cols=142  Identities=15%  Similarity=0.046  Sum_probs=90.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh------------------------------------
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT------------------------------------  103 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------  103 (304)
                      ..|.. +.+|.|++|.||.|..+.   +|+.||||+.+......                                    
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~---~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~  195 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKD---NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK  195 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECC---CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence            34555 789999999999988752   38999999997542110                                    


Q ss_pred             ------HHHHHHH-hhCC----CCCcccceeeeeeCCCCceEEEEeecCCCChhhHh--hhcCC---CCCHHHHHHHHHH
Q 046594          104 ------KLEEEIL-LKSS----SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNL--REKGG---PLDWEKRLAIALQ  167 (304)
Q Consensus       104 ------~~~~e~~-l~~l----~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~---~l~~~~~~~i~~q  167 (304)
                            ++..|.. +.++    .+.+.+.+-.++.+-....+|||||++|+++.++-  ...+.   .+....+..++.|
T Consensus       196 ~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q  275 (537)
T PRK04750        196 TLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ  275 (537)
T ss_pred             HHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence                  1222222 3222    23333333333332112238999999999998753  22221   1233333333444


Q ss_pred             HHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC----CeeEcccccccccCCC
Q 046594          168 IDSANQMVCMYSKPPIYHGNITSDNILLDELC----NAKLAGFGAANYCSGG  215 (304)
Q Consensus       168 i~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~----~~kl~Dfgla~~~~~~  215 (304)
                      +          ...|++|+|+||.||+++.++    .+++.|||++..+...
T Consensus       276 i----------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        276 V----------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             H----------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            3          345899999999999999888    9999999999877543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.31  E-value=2.3e-11  Score=99.89  Aligned_cols=140  Identities=14%  Similarity=0.111  Sum_probs=93.7

Q ss_pred             ccccCCccccceeeecceee---cCCCcEEEEEEeccccch-----------------------h-HHH----HHHH-hh
Q 046594           65 LKSFGDSVEGLTLIKGDRAV---SRNLTVVAVKARRYMASQ-----------------------T-KLE----EEIL-LK  112 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~---~~~~~~vavK~~~~~~~~-----------------------~-~~~----~e~~-l~  112 (304)
                      ...+|.|-.+.||.+.....   ..++..+|||+.+.....                       . .+.    .|.. |+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            35689999999999865321   113579999996532110                       0 111    4555 66


Q ss_pred             CCCC--CcccceeeeeeCCCCceEEEEeecCCCChhh-HhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 046594          113 SSSH--LNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW-NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT  189 (304)
Q Consensus       113 ~l~h--~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlk  189 (304)
                      ++..  -++..++++    ..+ +|||||+.++.+.. .+...  .++..+...+..+++.+|..|+  |+.|++||||+
T Consensus        82 rl~~~Gv~vP~pi~~----~~~-~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~--H~~glVHGDLs  152 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKH-VLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLY--KECNLVHADLS  152 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCC-EEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHH--HhCCeecCCCC
Confidence            6633  345555554    245 89999997654422 23222  3555667778899999999883  23389999999


Q ss_pred             CCCeeeCCCCCeeEcccccccccCC
Q 046594          190 SDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       190 p~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +.|||++ ++.++|+|||.+.....
T Consensus       153 ~~NIL~~-~~~v~iIDF~qav~~~h  176 (197)
T cd05146         153 EYNMLWH-DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             HHHEEEE-CCcEEEEECCCceeCCC
Confidence            9999997 46899999998876654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=3.6e-12  Score=109.44  Aligned_cols=99  Identities=28%  Similarity=0.305  Sum_probs=83.6

Q ss_pred             HHHHHH-hhCCCCCcccceeeeeeCCC----CceEEEEeecCCCChhhHhhhcCC---CCCHHHHHHHHHHHHHHHHHHh
Q 046594          105 LEEEIL-LKSSSHLNIVTLLGYPQDGL----QRRCLVFEFMQRGSLRWNLREKGG---PLDWEKRLAIALQIDSANQMVC  176 (304)
Q Consensus       105 ~~~e~~-l~~l~h~niv~~~~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~---~l~~~~~~~i~~qi~~~l~~Lh  176 (304)
                      .+.... |-.+.|.||++++.|+.+..    ....+++|||+.|+|.++|++...   .+......+|+-||+.||.|||
T Consensus       114 ~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh  193 (458)
T KOG1266|consen  114 RRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH  193 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Confidence            333444 66778999999999986643    345899999999999999987543   7888889999999999999999


Q ss_pred             hcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          177 MYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       177 ~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      . +++.|+|+++..+.|++..+|-+|+.
T Consensus       194 s-~~PpiihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  194 S-CDPPIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             c-cCCccccCCcchhheeecCCceEEec
Confidence            9 57889999999999999999988875

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.23  E-value=1.3e-10  Score=97.85  Aligned_cols=141  Identities=16%  Similarity=0.156  Sum_probs=105.2

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccc---hhHHHHHHH-hhCCCC--CcccceeeeeeCCC--CceEEEE
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---QTKLEEEIL-LKSSSH--LNIVTLLGYPQDGL--QRRCLVF  137 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~-l~~l~h--~niv~~~~~~~~~~--~~~~lv~  137 (304)
                      +.++.|..+.+|+....    +|..+++|.......   ...+..|.. ++.+.+  .++.+++.+.....  +..+++|
T Consensus         4 ~~l~~G~~n~~~~v~~~----~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG----GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEec----CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence            56899999999988753    357899999876443   236666676 777765  34566777766542  2348999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS--------------------------------------  179 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~--------------------------------------  179 (304)
                      ||++|.++.+.+..  ..++..+...++.+++++|..||+..                                      
T Consensus        80 e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (223)
T cd05154          80 ERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM  157 (223)
T ss_pred             EEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence            99999888876542  25777788888888888888888421                                      


Q ss_pred             ---------------CCCeeecCCCCCCeeeCC--CCCeeEccccccccc
Q 046594          180 ---------------KPPIYHGNITSDNILLDE--LCNAKLAGFGAANYC  212 (304)
Q Consensus       180 ---------------~~~ivH~dlkp~Nill~~--~~~~kl~Dfgla~~~  212 (304)
                                     ...++|+|++|.||+++.  ++.+.|+||+.+..-
T Consensus       158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g  207 (223)
T cd05154         158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG  207 (223)
T ss_pred             HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence                           246799999999999998  567899999987643

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.21  E-value=6.6e-12  Score=113.90  Aligned_cols=139  Identities=17%  Similarity=0.183  Sum_probs=100.6

Q ss_pred             ceEEEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      .+|+.|++|...+|.++|.+...  ..++.....++.|++.|++|      ++.+|+|+||.||+...+..+||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence            36899999999999999975432  67888899999999999888      58999999999999999999999999998


Q ss_pred             cccCCCC-------C-CcccccCcccc------------ccccc-----------CCCCc-------ceeccccCCCCCC
Q 046594          210 NYCSGGS-------N-RRNCEKTSEMA------------EDIND-----------FVGGQ-------ECLDQRLYIPNEK  251 (304)
Q Consensus       210 ~~~~~~~-------~-~~~~~~~~~~s------------~DV~S-----------~~~~~-------~~~~~~~~~~~~~  251 (304)
                      .......       . ....++..|++            +|||+           |.+..       ++-|..+   +..
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~i---p~~  480 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGII---PPE  480 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCC---ChH
Confidence            8776555       1 33334433333            89998           22211       3333333   212


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHH
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVD  285 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~  285 (304)
                      +-.+. +.-..|+.+++.     +.|.+||++.+
T Consensus       481 ~~~d~-p~e~~ll~~lls-----~~p~~RP~~~~  508 (516)
T KOG1033|consen  481 FLQDY-PEEYTLLQQLLS-----PSPEERPSAIE  508 (516)
T ss_pred             HhhcC-cHHHHHHHHhcC-----CCcccCchHHH
Confidence            22222 334588889999     99999994443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=6e-12  Score=120.34  Aligned_cols=217  Identities=16%  Similarity=0.143  Sum_probs=150.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCC-CCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~  134 (304)
                      .|+..+.+|+|.|+.+-.+.....  ....+|+|.........    ....+.. -+.+. |+|++++++...+.+.. +
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~--~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~-~   97 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRD--PESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSY-L   97 (601)
T ss_pred             cccccccccccccchhhhhhhcCC--CcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccc-c
Confidence            467778899999999876655322  23567777776554222    3333444 44554 99999999999988666 9


Q ss_pred             EEEeecCCCChhhHh-hhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNL-REKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l-~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~~~  212 (304)
                      ++++|..++++.+.+ +......+...+-.++.|+..++.|+|.  ..++.|||+||+|.+++..+ ..+++|||+|..+
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence            999999999999988 4443256777888999999999999962  44899999999999999999 9999999999877


Q ss_pred             CC-CCC----Ccccc-c---------Cc--ccc--ccccc-------CCCCc--------------ceeccccCCCCCCc
Q 046594          213 SG-GSN----RRNCE-K---------TS--EMA--EDIND-------FVGGQ--------------ECLDQRLYIPNEKF  252 (304)
Q Consensus       213 ~~-~~~----~~~~~-~---------~~--~~s--~DV~S-------~~~~~--------------~~~~~~~~~~~~~~  252 (304)
                      .. ...    ...++ .         .+  +..  .|+||       .-.++              ....... ......
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~  254 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKG-RFTQLP  254 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccc-ccccCc
Confidence            65 222    22333 2         11  222  89999       00000              1111110 000112


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      .........+++.+++.     .+|..|.+..++..
T Consensus       255 ~~~~~~~~~~~l~k~l~-----~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  255 WNSISDQAHDLLHKILK-----ENPSNRLSIEELKL  285 (601)
T ss_pred             cccCChhhhhccccccc-----CCchhccccccccc
Confidence            23445678889999999     99999999887753

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.17  E-value=3.2e-10  Score=90.66  Aligned_cols=131  Identities=17%  Similarity=0.193  Sum_probs=87.0

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccc-----cchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYM-----ASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~-----~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+++|+-+.++...+.     |..+++|.--..     ..+.     ....|.. ++++.--.|.-..=+..+.++. .
T Consensus         2 ~~i~~GAEa~i~~~~~~-----g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~-~   75 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-----GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNG-L   75 (204)
T ss_pred             chhhCCcceeEEeeecc-----CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-E
Confidence            35678999999888664     344555543211     1111     3334555 6666544554444445555455 8


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |+|||.+|..|.+.+...    .    ..++..+-.-+.-||.   .||+|+||.++||++..++ +.++|||++.....
T Consensus        76 I~me~I~G~~lkd~l~~~----~----~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~  143 (204)
T COG3642          76 IVMEYIEGELLKDALEEA----R----PDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDE  143 (204)
T ss_pred             EEEEEeCChhHHHHHHhc----c----hHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCccccccc
Confidence            999999998888888765    1    3445555555555855   4999999999999998765 99999999975543

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.14  E-value=4.4e-10  Score=89.64  Aligned_cols=140  Identities=18%  Similarity=0.109  Sum_probs=95.1

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEecccc-----chh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA-----SQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~-----~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .+..+-+|+.+.|+.+.+.     |+...||.-....     .+.     +..+|.. |.++.--.|.-..=++.+....
T Consensus        11 ~l~likQGAEArv~~~~~~-----Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~   85 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-----GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGG   85 (229)
T ss_pred             cceeeeccceeeEeeeccC-----CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence            4567788999999888875     5777777643211     111     4445555 6666544554444455555566


Q ss_pred             eEEEEeecCC-CChhhHhhhcCCC-CCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC---CeeEcccc
Q 046594          133 RCLVFEFMQR-GSLRWNLREKGGP-LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC---NAKLAGFG  207 (304)
Q Consensus       133 ~~lv~e~~~~-gsL~~~l~~~~~~-l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~---~~kl~Dfg  207 (304)
                       .|+|||.+| .++.+++...... ........++.++-+.+.-||.   .+++|+||..+||++..++   ++.++|||
T Consensus        86 -~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfg  161 (229)
T KOG3087|consen   86 -QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFG  161 (229)
T ss_pred             -eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeec
Confidence             899999976 3677777665432 2223336788888888888955   4799999999999997654   46899999


Q ss_pred             ccccc
Q 046594          208 AANYC  212 (304)
Q Consensus       208 la~~~  212 (304)
                      ++...
T Consensus       162 ls~~s  166 (229)
T KOG3087|consen  162 LSSVS  166 (229)
T ss_pred             chhcc
Confidence            98644

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.07  E-value=3.7e-10  Score=104.28  Aligned_cols=219  Identities=16%  Similarity=0.019  Sum_probs=154.4

Q ss_pred             HHHHHhhccccccCC--ccccceeeecceeecCCCcEEEEEEeccccc--hh---HHHHHHHhhCC-CCCcccceeeeee
Q 046594           56 LAILKRRRMLKSFGD--SVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--QT---KLEEEILLKSS-SHLNIVTLLGYPQ  127 (304)
Q Consensus        56 ~~~~~~~~~~~~lg~--g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~~---~~~~e~~l~~l-~h~niv~~~~~~~  127 (304)
                      -++-.++...+.+|.  |.+|.+|.+.... -.++..+|+|+.+....  ..   .+++....+++ .|+|.++.+..+.
T Consensus       110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~-~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e  188 (524)
T KOG0601|consen  110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTN-SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE  188 (524)
T ss_pred             chhhhhcccccccccCCCCCceeecccCCc-ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc
Confidence            344556788899999  9999999988733 25788999999654433  22   33333334444 6999999877777


Q ss_pred             CCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHH----HHHHHhhcCCCCeeecCCCCCCeeeCCC-CCee
Q 046594          128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDS----ANQMVCMYSKPPIYHGNITSDNILLDEL-CNAK  202 (304)
Q Consensus       128 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~----~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~k  202 (304)
                      .++ .+++-+|++. .+|.++.+.-..-++....+....+...    ||.++   |..+++|-|+||+||+...+ ...+
T Consensus       189 ~~~-~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~---hs~~~~~~~~kp~~i~~~~~~~s~~  263 (524)
T KOG0601|consen  189 GSG-ILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHL---HSNNIVHDDLKPANIFTTSDWTSCK  263 (524)
T ss_pred             cCC-cceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhccccccccc---CCCcccccccchhheecccccceee
Confidence            774 4499999995 5999888877656888888888888888    97777   55689999999999999999 7899


Q ss_pred             EcccccccccCCCCC--Ccc-----ccc---------Ccccc--ccccc-------------------CCCCcceecccc
Q 046594          203 LAGFGAANYCSGGSN--RRN-----CEK---------TSEMA--EDIND-------------------FVGGQECLDQRL  245 (304)
Q Consensus       203 l~Dfgla~~~~~~~~--~~~-----~~~---------~~~~s--~DV~S-------------------~~~~~~~~~~~~  245 (304)
                      ++|||+...+....-  ...     .+.         .+..+  .|+|+                   +..+.++-...+
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i  343 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI  343 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence            999999988766542  000     111         22222  88888                   122222211112


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          246 YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       246 ~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                         ..++-..-+.++...+.++++     .+|..|++...+.+
T Consensus       344 ---p~e~~~~~s~~l~~~~~~~~d-----~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  344 ---PLEFCEGGSSSLRSVTSQMLD-----EDPRLRLTAQILTA  378 (524)
T ss_pred             ---chhhhcCcchhhhhHHHHhcC-----cchhhhhHHHHHhc
Confidence               233444445666678899999     99999999887765

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.01  E-value=7.2e-10  Score=102.36  Aligned_cols=219  Identities=18%  Similarity=0.089  Sum_probs=150.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..|..+..||.+.|+.++.+..+.  .++..+++|.+.......     -+.+.+. .....|.+++..+..|....+. 
T Consensus       265 ~df~~v~~i~~~~~~~~~~~~~r~--~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~-  341 (524)
T KOG0601|consen  265 TDFGLVSKISDGNFSSVFKVSKRP--EGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG-  341 (524)
T ss_pred             CCcceeEEccCCccccceeeeecC--CCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc-
Confidence            356667899999999998877432  357889999887654332     4445555 3344789999988877776555 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-CCeeEccccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-CNAKLAGFGAANYC  212 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfgla~~~  212 (304)
                      |+=.|||+++++...+.-.. .+++..++++..|++.++.++   |.+.++|+|+||+||++..+ +..++.|||.+..+
T Consensus       342 ~ip~e~~~~~s~~l~~~~~~-~~d~~~~~~~~~q~~~~l~~i---~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~  417 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRSVTSQ-MLDEDPRLRLTAQILTALNVI---HSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL  417 (524)
T ss_pred             cCchhhhcCcchhhhhHHHH-hcCcchhhhhHHHHHhccccc---cchhhhcccccccceeeccchhhhhcccccccccc
Confidence            79999999998876653322 788899999999999998888   56689999999999999886 78899999988643


Q ss_pred             CCCCC---Ccccc------c---Ccccc-cccccCCCCc-----------------ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN---RRNCE------K---TSEMA-EDINDFVGGQ-----------------ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~---~~~~~------~---~~~~s-~DV~S~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .-...   .....      .   ....+ .|++|+...-                 .+....+     .........+..
T Consensus       418 ~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~~~~-----p~~~~~~~~~q~  492 (524)
T KOG0601|consen  418 AFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIRSGDT-----PNLPGLKLQLQV  492 (524)
T ss_pred             ceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccceeeecccc-----cCCCchHHhhhh
Confidence            22111   11110      0   11122 7888832111                 1111111     111223377888


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +.+.+..     +++..||.+.++..+.+-...
T Consensus       493 ~~kv~~~-----~~~~~~~l~~~l~~~~~~~~~  520 (524)
T KOG0601|consen  493 LLKVMIN-----PDRKRRPSAVELSLHSEFYRD  520 (524)
T ss_pred             hhhhhcC-----Cccccchhhhhhcccchhhhh
Confidence            8889999     999999999988876655443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.97  E-value=4.2e-10  Score=109.57  Aligned_cols=110  Identities=22%  Similarity=0.273  Sum_probs=75.9

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHHhhCCCCCcccceeeeeeCCCCceEEEEeec
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      .|..++.+..|+||.||+.+++.+   .+.+|.|.-+...   .      +     +||..+-    +  +. +.|    
T Consensus        84 df~~IklisngAygavylvrh~~t---rqrfa~kiNkq~l---i------l-----Rnilt~a----~--np-fvv----  135 (1205)
T KOG0606|consen   84 DFNTIKLISNGAYGAVYLVRHKET---RQRFAMKINKQNL---I------L-----RNILTFA----G--NP-FVV----  135 (1205)
T ss_pred             ccceeEeeccCCCCceeeeecccc---ccchhhcccccch---h------h-----hcccccc----C--Cc-cee----
Confidence            477889999999999999998754   3678884433221   1      1     1222221    1  12 333    


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                        |+-...+...+ +++...        +.+++|||+   .||+|||+||+|.+|+.-|.+|++|||+.+..
T Consensus       136 --gDc~tllk~~g-~lPvdm--------vla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  136 --GDCATLLKNIG-PLPVDM--------VLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             --chhhhhcccCC-CCcchh--------hHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhh
Confidence              45555565544 444332        788999955   49999999999999999999999999998743

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.93  E-value=7e-09  Score=84.88  Aligned_cols=100  Identities=22%  Similarity=0.216  Sum_probs=60.4

Q ss_pred             HHHHHHH-hhCCCCC--cccceeeeeeCCCCceEEEEeecC--CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 046594          104 KLEEEIL-LKSSSHL--NIVTLLGYPQDGLQRRCLVFEFMQ--RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY  178 (304)
Q Consensus       104 ~~~~e~~-l~~l~h~--niv~~~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~  178 (304)
                      ..+.|.. |.++..-  ++.+++++.    .+ +|||||++  |..+..+....   ++......++.+++..+..++  
T Consensus        54 ~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~-~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~--  123 (188)
T PF01163_consen   54 WAKKEFRNLKRLYEAGVPVPKPYDYN----RN-VIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKML--  123 (188)
T ss_dssp             HHHHHHHHHHHCCCTT-SS--EEEEE----TT-EEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHCCccCCcEEEEe----CC-EEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHH--
Confidence            3446666 7777655  445555442    34 89999998  55555443322   113344556666666444432  


Q ss_pred             CCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          179 SKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       179 ~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |+.|++|+||.+.|||++.+ .+.++|||.+.....
T Consensus       124 ~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~~  158 (188)
T PF01163_consen  124 HKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSSH  158 (188)
T ss_dssp             HCTTEEESS-STTSEEEETT-CEEE--GTTEEETTS
T ss_pred             HhcCceecCCChhhEEeecc-eEEEEecCcceecCC
Confidence            34499999999999999987 899999998876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.91  E-value=1.4e-08  Score=87.92  Aligned_cols=122  Identities=12%  Similarity=0.036  Sum_probs=84.6

Q ss_pred             CCcEEEEEEeccccchh-------------HHHHHHH-hhCCCCCc--ccceeeeeeCC----CCceEEEEeecCCC-Ch
Q 046594           87 NLTVVAVKARRYMASQT-------------KLEEEIL-LKSSSHLN--IVTLLGYPQDG----LQRRCLVFEFMQRG-SL  145 (304)
Q Consensus        87 ~~~~vavK~~~~~~~~~-------------~~~~e~~-l~~l~h~n--iv~~~~~~~~~----~~~~~lv~e~~~~g-sL  145 (304)
                      +|+.+.||.........             ....|.. +.++..-+  ..+++++....    ...-+||+|++++. +|
T Consensus        44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL  123 (268)
T PRK15123         44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISL  123 (268)
T ss_pred             CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccH
Confidence            56789999764433111             2445555 66653333  33445554321    11238999999886 79


Q ss_pred             hhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-------CCCeeEcccccccc
Q 046594          146 RWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-------LCNAKLAGFGAANY  211 (304)
Q Consensus       146 ~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-------~~~~kl~Dfgla~~  211 (304)
                      .+++... ..+.+......++.+++..+.-||..   |++|+|++++|||++.       ++.+.++||+.+..
T Consensus       124 ~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        124 EDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            9888642 12556777889999999999999664   8999999999999975       46899999998754

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.84  E-value=1.8e-08  Score=94.42  Aligned_cols=119  Identities=24%  Similarity=0.220  Sum_probs=97.7

Q ss_pred             CCCcEEEEEEeccccc--hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHH
Q 046594           86 RNLTVVAVKARRYMAS--QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRL  162 (304)
Q Consensus        86 ~~~~~vavK~~~~~~~--~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~  162 (304)
                      .++.+|.|...+....  .+...+.+. |+.++||||++++..+...+ .+|||+|.+.  .|..++.+.+    .....
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~-~~ylvTErV~--Pl~~~lk~l~----~~~v~  107 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG-TLYLVTERVR--PLETVLKELG----KEEVC  107 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC-ceEEEeeccc--cHHHHHHHhH----HHHHH
Confidence            4678888888887666  225566666 99999999999999998885 5599999983  6777777643    56666


Q ss_pred             HHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       163 ~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      .-+.||+.||.|||+  +.+++|++|.-+.|+|+..|..||++|.++....
T Consensus       108 ~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~  156 (690)
T KOG1243|consen  108 LGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS  156 (690)
T ss_pred             HHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence            778999999999984  4589999999999999999999999998875543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.75  E-value=1.2e-07  Score=79.19  Aligned_cols=106  Identities=20%  Similarity=0.212  Sum_probs=77.4

Q ss_pred             HHHHHHH-hhCCCC--CcccceeeeeeCCC---CceEEEEeecCCC-ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHh
Q 046594          104 KLEEEIL-LKSSSH--LNIVTLLGYPQDGL---QRRCLVFEFMQRG-SLRWNLREKGGPLDWEKRLAIALQIDSANQMVC  176 (304)
Q Consensus       104 ~~~~e~~-l~~l~h--~niv~~~~~~~~~~---~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh  176 (304)
                      ....|.. +..+..  -...+.+++.....   ..-++|+|++++. +|.+++.... .++......++.+++..++-||
T Consensus        57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-~~~~~~~~~ll~~l~~~i~~lH  135 (206)
T PF06293_consen   57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-QLDPSQRRELLRALARLIAKLH  135 (206)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-ccchhhHHHHHHHHHHHHHHHH
Confidence            3344444 554432  23455566654422   1238999999874 7999988754 3667778899999999999996


Q ss_pred             hcCCCCeeecCCCCCCeeeCCCC---CeeEcccccccccC
Q 046594          177 MYSKPPIYHGNITSDNILLDELC---NAKLAGFGAANYCS  213 (304)
Q Consensus       177 ~~~~~~ivH~dlkp~Nill~~~~---~~kl~Dfgla~~~~  213 (304)
                      +.   ||+|+|+++.|||++.++   .+.++||+-++...
T Consensus       136 ~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  136 DA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            65   899999999999999886   89999999776543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.73  E-value=8.8e-08  Score=87.54  Aligned_cols=137  Identities=14%  Similarity=0.033  Sum_probs=105.4

Q ss_pred             cceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeC---CCCceEEEEeecCC-CChh
Q 046594           74 GLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQD---GLQRRCLVFEFMQR-GSLR  146 (304)
Q Consensus        74 g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~---~~~~~~lv~e~~~~-gsL~  146 (304)
                      .+.|++...   .||..+++|+++....+.  ....-+. ++++.|+|+|++.+++..   ++..+++||+|+|+ ++|.
T Consensus       290 ~Ttyk~~s~---~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~  366 (655)
T KOG3741|consen  290 ITTYKATSN---VDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY  366 (655)
T ss_pred             ceeEeeeec---cCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence            455666554   578999999995444333  3334455 999999999999998863   23557999999986 4677


Q ss_pred             hHhhhc--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          147 WNLREK--------------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       147 ~~l~~~--------------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ++-...              +...++...|.|+.|+..||.++|+.   |+.-+-|.+.+||++.+.+++|+..|....+
T Consensus       367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl  443 (655)
T KOG3741|consen  367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL  443 (655)
T ss_pred             HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence            654321              12578899999999999999999654   8999999999999999989999988887766


Q ss_pred             CCCC
Q 046594          213 SGGS  216 (304)
Q Consensus       213 ~~~~  216 (304)
                      ....
T Consensus       444 ~~d~  447 (655)
T KOG3741|consen  444 QEDP  447 (655)
T ss_pred             cCCC
Confidence            5554

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.68  E-value=1.6e-07  Score=88.13  Aligned_cols=141  Identities=14%  Similarity=0.054  Sum_probs=87.6

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh------------------------------------------
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT------------------------------------------  103 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------------  103 (304)
                      +.++.++-|.||.|..+    +|+.||||+.+..-...                                          
T Consensus       131 ~PiAsASIaQVH~A~L~----sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~El  206 (517)
T COG0661         131 EPIASASIAQVHRAVLK----SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREEL  206 (517)
T ss_pred             CchhhhhHhhheeEEec----CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHh
Confidence            57788899999877764    68999999977643322                                          


Q ss_pred             HHHHHHH-hhCC----CCCcccceeeeeeC-CCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046594          104 KLEEEIL-LKSS----SHLNIVTLLGYPQD-GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCM  177 (304)
Q Consensus       104 ~~~~e~~-l~~l----~h~niv~~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~  177 (304)
                      +++.|.. +.++    +...-+.+-..+.+ .... .|+|||++|..+.+.........+......   .++++  |+.+
T Consensus       207 Dy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~-VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~---~~~~~--f~~q  280 (517)
T COG0661         207 DYRREAANAERFRENFKDDPDVYVPKVYWEYTTRR-VLTMEWIDGIKISDIAALKSAGIDRKELAE---LLVRA--FLRQ  280 (517)
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCc-EEEEEeeCCEecccHHHHHhcCCCHHHHHH---HHHHH--HHHH
Confidence            1122222 2222    11111222233322 2244 899999999999887433223455333322   22222  1221


Q ss_pred             cCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          178 YSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       178 ~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      .-..|++|.|.+|.||+++.+|.+.+.|||+...+.+..
T Consensus       281 ~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~  319 (517)
T COG0661         281 LLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPKF  319 (517)
T ss_pred             HHhcCccccCCCccceEEecCCcEEEEcCcceecCCHHH
Confidence            122389999999999999999999999999998776543

>PRK09902 hypothetical protein; Provisional

Probab=98.62  E-value=9.1e-07  Score=73.20  Aligned_cols=135  Identities=14%  Similarity=-0.018  Sum_probs=92.3

Q ss_pred             CCccccceeeecceeecCCCcEEEEEEeccc--------cchhHHHHHHH-hhCCCCCc--ccceeeeeeC--C-CCceE
Q 046594           69 GDSVEGLTLIKGDRAVSRNLTVVAVKARRYM--------ASQTKLEEEIL-LKSSSHLN--IVTLLGYPQD--G-LQRRC  134 (304)
Q Consensus        69 g~g~~g~v~~~~~~~~~~~~~~vavK~~~~~--------~~~~~~~~e~~-l~~l~h~n--iv~~~~~~~~--~-~~~~~  134 (304)
                      |+||-+.|+...+.     |..+-+|.....        .....|..|.. +..+..-+  +.+...+...  + ...-+
T Consensus        27 ~rgG~SgV~r~~~~-----g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~  101 (216)
T PRK09902         27 RRNGMSGVQCVERN-----GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRAL  101 (216)
T ss_pred             CCCCcceEEEEEeC-----CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEE
Confidence            55788878776553     457889987621        11225556666 77664322  4444422111  1 11237


Q ss_pred             EEEeecCC-CChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC--eeEccccccc
Q 046594          135 LVFEFMQR-GSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN--AKLAGFGAAN  210 (304)
Q Consensus       135 lv~e~~~~-gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~--~kl~Dfgla~  210 (304)
                      ||+|-+++ .+|.+++....- +.+...+..+..+++..++-||..   |+.|+|+.+.||+++.++.  +.++||.-++
T Consensus       102 LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        102 LVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            99998863 489998866432 567888889999999999999554   8999999999999986666  9999997554


Q ss_pred             c
Q 046594          211 Y  211 (304)
Q Consensus       211 ~  211 (304)
                      .
T Consensus       179 ~  179 (216)
T PRK09902        179 R  179 (216)
T ss_pred             h
Confidence            3

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.60  E-value=3.7e-07  Score=77.57  Aligned_cols=130  Identities=19%  Similarity=0.128  Sum_probs=83.9

Q ss_pred             ccccccCCccccceeeecceeecCCCcEEEEEEeccccchh------------------------HHHHHHH-hhCCCCC
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT------------------------KLEEEIL-LKSSSHL  117 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~e~~-l~~l~h~  117 (304)
                      .+...||-|--+.||.+.+.    +|.++|||.=+.....-                        .-+.|.. |.++...
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~----~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~  169 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDP----KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE  169 (304)
T ss_pred             hhccccccCccceEEEEECC----CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence            45678999999999998874    68999999844321110                        2234444 5555433


Q ss_pred             --cccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee
Q 046594          118 --NIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL  195 (304)
Q Consensus       118 --niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill  195 (304)
                        .+.+.+++    +.+ .+||||.+|-.|...--..  .-+......++.++..+       -..|++|+|+.+-||++
T Consensus       170 G~~VP~P~~~----nRH-aVvMe~ieG~eL~~~r~~~--en~~~il~~il~~~~~~-------~~~GiVHGDlSefNIlV  235 (304)
T COG0478         170 GVKVPKPIAW----NRH-AVVMEYIEGVELYRLRLDV--ENPDEILDKILEEVRKA-------YRRGIVHGDLSEFNILV  235 (304)
T ss_pred             CCCCCCcccc----ccc-eeeeehcccceeecccCcc--cCHHHHHHHHHHHHHHH-------HHcCccccCCchheEEE
Confidence              44444443    355 8999999986666432110  11222233344444444       23389999999999999


Q ss_pred             CCCCCeeEccccccc
Q 046594          196 DELCNAKLAGFGAAN  210 (304)
Q Consensus       196 ~~~~~~kl~Dfgla~  210 (304)
                      ++||.+.++||--+.
T Consensus       236 ~~dg~~~vIDwPQ~v  250 (304)
T COG0478         236 TEDGDIVVIDWPQAV  250 (304)
T ss_pred             ecCCCEEEEeCcccc
Confidence            999999999995443

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.57  E-value=7.7e-07  Score=73.07  Aligned_cols=100  Identities=25%  Similarity=0.201  Sum_probs=80.5

Q ss_pred             HHHH-hhCCCC-CcccceeeeeeCCCCceEEEEeecCCCChhhH---hhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046594          107 EEIL-LKSSSH-LNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN---LREKGGPLDWEKRLAIALQIDSANQMVCMYSKP  181 (304)
Q Consensus       107 ~e~~-l~~l~h-~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~---l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~  181 (304)
                      +|.. ++.+++ +++.+++|+|    ++ +++.||.+.+++...   +.... ..+|..+.+|+.++++.+++|++....
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~C----G~-~~v~E~~~~~~~~~~~~~l~~~~-~~~w~~R~~iA~~lL~~l~~l~~~~~~   81 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSC----GR-FYVVEYVGAGSLYGIYRPLSQFL-QSPWEQRAKIALQLLELLEELDHGPLG   81 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeEC----CC-EEEEEeecCcccccccccccccc-ccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4566 777766 6999999999    34 789999987766432   11111 469999999999999999999876666


Q ss_pred             CeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          182 PIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       182 ~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .+.-.|++++|+-+++++++|++|...+...
T Consensus        82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            6889999999999999999999999876544

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.50  E-value=2.2e-06  Score=72.61  Aligned_cols=137  Identities=12%  Similarity=0.124  Sum_probs=80.4

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcc--cceeeeeeCCCCceEEEEeecCC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNI--VTLLGYPQDGLQRRCLVFEFMQR  142 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~ni--v~~~~~~~~~~~~~~lv~e~~~~  142 (304)
                      ..||.|..+.+|+..       +..+++|...........++|.. ++.+..-++  .+.+++....+. ..++||+++|
T Consensus         7 ~~i~~G~t~~~y~~~-------~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~-~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTHK-------TGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGR-LGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEec-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCe-eeeeeeecCC
Confidence            578999999999731       34678898876554445667776 777654433  556666655534 4899999988


Q ss_pred             CC-hhhHh---------------------hhcCC-CCCHHHHH-HHHHH----------HHH-HHHHHhh-cCCCCeeec
Q 046594          143 GS-LRWNL---------------------REKGG-PLDWEKRL-AIALQ----------IDS-ANQMVCM-YSKPPIYHG  186 (304)
Q Consensus       143 gs-L~~~l---------------------~~~~~-~l~~~~~~-~i~~q----------i~~-~l~~Lh~-~~~~~ivH~  186 (304)
                      .+ +...+                     +.... ..+..... .+..+          +.. ..++|.. .....++|+
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg  158 (226)
T TIGR02172        79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG  158 (226)
T ss_pred             ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence            63 21111                     11100 11111100 01000          001 1122221 123457899


Q ss_pred             CCCCCCeeeCCCCCeeEcccccccc
Q 046594          187 NITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       187 dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      |+.|.||+++.++ +.++||+.+..
T Consensus       159 D~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       159 DFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCCCCcEEEcCCC-cEEEechhcCc
Confidence            9999999999888 99999997753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.41  E-value=4.4e-06  Score=69.49  Aligned_cols=138  Identities=12%  Similarity=0.109  Sum_probs=82.1

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HH---------HHHHH-hhCC---CCCcccc
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KL---------EEEIL-LKSS---SHLNIVT  121 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~---------~~e~~-l~~l---~h~niv~  121 (304)
                      ++-..|+..+.+-......|.+-..     +|..+.+|..+......  .|         .+.+. +.++   .--..+.
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIei-----~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~  102 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIEI-----DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPAD  102 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEEE-----CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccc
Confidence            3445666666666666555544443     57899999987644322  11         12222 2222   2233333


Q ss_pred             eeeeeeCC----CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC
Q 046594          122 LLGYPQDG----LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE  197 (304)
Q Consensus       122 ~~~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~  197 (304)
                      ++.+..-.    ....+++|||++|..|.+...     +++    .+...+.+++.-||.   .|++|+|.+|.|++++.
T Consensus       103 ~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  103 PYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSN  170 (229)
T ss_pred             ceeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEEC
Confidence            33222111    122368999999988876542     222    233456666666755   49999999999999986


Q ss_pred             CCCeeEccccccccc
Q 046594          198 LCNAKLAGFGAANYC  212 (304)
Q Consensus       198 ~~~~kl~Dfgla~~~  212 (304)
                      + .+++.||+..+..
T Consensus       171 ~-~i~iID~~~k~~~  184 (229)
T PF06176_consen  171 N-GIRIIDTQGKRMS  184 (229)
T ss_pred             C-cEEEEECcccccc
Confidence            5 5999999876543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.40  E-value=1.7e-06  Score=81.09  Aligned_cols=141  Identities=15%  Similarity=0.042  Sum_probs=86.4

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh---------------------------------------HHH
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---------------------------------------KLE  106 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------------------------~~~  106 (304)
                      +.||.-..|.|++|+-    ++|+.||||+.+..-...                                       +|.
T Consensus       167 ~piaaASlaQVhrA~L----~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~  242 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARL----KNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFT  242 (538)
T ss_pred             chhhhcchhheEEEEe----cCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchH
Confidence            4677778888977765    469999999977543221                                       111


Q ss_pred             HHHH-----hhCCCCCcc---cceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 046594          107 EEIL-----LKSSSHLNI---VTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY  178 (304)
Q Consensus       107 ~e~~-----l~~l~h~ni---v~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~  178 (304)
                      .|..     .+.+.|-+.   |.+-.++.+-.....|+||||+|..+.+.-.-....++......-+.+   +  |+++.
T Consensus       243 ~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~---~--~~~qI  317 (538)
T KOG1235|consen  243 KEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVE---A--YLEQI  317 (538)
T ss_pred             HHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHH---H--HHHHH
Confidence            1111     122233331   122233333323348999999998777654333224666544333333   3  23333


Q ss_pred             CCCCeeecCCCCCCeeeCC----CCCeeEcccccccccCCC
Q 046594          179 SKPPIYHGNITSDNILLDE----LCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       179 ~~~~ivH~dlkp~Nill~~----~~~~kl~Dfgla~~~~~~  215 (304)
                      -..|++|+|-+|.||++..    ++.+.+.|||+...+...
T Consensus       318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence            3448999999999999984    568999999998876543

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.40  E-value=2.8e-06  Score=67.83  Aligned_cols=132  Identities=18%  Similarity=0.191  Sum_probs=92.6

Q ss_pred             ccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccc-eeeeeeCCCCceEEEEeec
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVT-LLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~-~~~~~~~~~~~~~lv~e~~  140 (304)
                      +..+.|++|.+|.||++.++     |..+|+|+.+.+.....++.|.. |..+...++.+ ++.|..+     ++.|||.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~-----~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~-----~i~me~i   94 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR-----GGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGED-----FIRMEYI   94 (201)
T ss_pred             hhhhhhhcccccEEEEeecc-----CceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechh-----hhhhhhh
Confidence            56788999999999999986     46899999998888778888888 88888777764 3444222     5679999


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC-CCCeeeCCCCCeeEcccccccccCCC
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT-SDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlk-p~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      .|..|.+.-...    +......++.. +..   |   ...||-|+.|. |...++..++.+.|+||..|+.-..+
T Consensus        95 ~G~~L~~~~~~~----~rk~l~~vlE~-a~~---L---D~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~~p  159 (201)
T COG2112          95 DGRPLGKLEIGG----DRKHLLRVLEK-AYK---L---DRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKKKP  159 (201)
T ss_pred             cCcchhhhhhcc----cHHHHHHHHHH-HHH---H---HHhccchhhhcCCceeEEecCCcEEEEEccchhhccCC
Confidence            998887655431    33333333332 333   3   33389898886 45455555558999999988855443

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.25  E-value=1e-05  Score=68.23  Aligned_cols=144  Identities=18%  Similarity=0.229  Sum_probs=86.8

Q ss_pred             HHHHhhcccc---ccCCccccceeeecceeecCCCcEEEEEEeccccchh-----------HH---------------HH
Q 046594           57 AILKRRRMLK---SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----------KL---------------EE  107 (304)
Q Consensus        57 ~~~~~~~~~~---~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----------~~---------------~~  107 (304)
                      .+..+..+..   .+..|-.+.||++..    .++..+|||+.......-           .|               +.
T Consensus        42 ~L~~rg~i~~~~g~istGKEA~Vy~a~~----~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~k  117 (268)
T COG1718          42 RLLSRGVITELVGCISTGKEANVYLAET----GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARK  117 (268)
T ss_pred             HHhcCCceeeeEeeecCCcceEEEeecc----CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHH
Confidence            3444555544   455666677888765    357899999987543321           11               11


Q ss_pred             HHH-hhCCC--CCcccceeeeeeCCCCceEEEEeecCCC-ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046594          108 EIL-LKSSS--HLNIVTLLGYPQDGLQRRCLVFEFMQRG-SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI  183 (304)
Q Consensus       108 e~~-l~~l~--h~niv~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~i  183 (304)
                      |+. |+++.  +-.+.+.+++.    +. .|||||+... .-.-.|..-  ++.......+..++++.+.-|-.  ..++
T Consensus       118 Ef~NL~R~~eAGVrvP~Pi~~~----~n-VLvMEfIg~~g~pAP~LkDv--~~e~~e~~~~~~~~v~~~~~l~~--~a~L  188 (268)
T COG1718         118 EFRNLKRAYEAGVRVPEPIAFR----NN-VLVMEFIGDDGLPAPRLKDV--PLELEEAEGLYEDVVEYMRRLYK--EAGL  188 (268)
T ss_pred             HHHHHHHHHHcCCCCCCceeec----CC-eEEEEeccCCCCCCCCcccC--CcCchhHHHHHHHHHHHHHHHHH--hcCc
Confidence            222 32221  12222222221    23 7999999653 111222222  23333667777778777777753  2489


Q ss_pred             eecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          184 YHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       184 vH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||+||..-|||+. ++.+.|+|||-|.....
T Consensus       189 VHgDLSEyNiL~~-~~~p~iID~~QaV~~~h  218 (268)
T COG1718         189 VHGDLSEYNILVH-DGEPYIIDVSQAVTIDH  218 (268)
T ss_pred             ccccchhhheEEE-CCeEEEEECccccccCC
Confidence            9999999999999 78999999997765543

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.18  E-value=2.6e-05  Score=66.73  Aligned_cols=138  Identities=15%  Similarity=0.095  Sum_probs=77.4

Q ss_pred             ccCCccc-cceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCC-CCcccceeeeeeCCCCceEEEEeecCCC
Q 046594           67 SFGDSVE-GLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRCLVFEFMQRG  143 (304)
Q Consensus        67 ~lg~g~~-g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~lv~e~~~~g  143 (304)
                      .|-.|.. ..||+....     +..+.+|...... ...+..|+. ++.+. +--+.+++++....+.. ++|||+++|.
T Consensus         5 ~~~~g~~~~~v~~~~~~-----~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~-~lv~e~i~G~   77 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-----NPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDDGRA-WLLTSAVPGV   77 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-----CCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecCCcc-EEEEEeeCCc
Confidence            4555555 567776542     3678888886543 223444554 55552 33355667766655445 8999999998


Q ss_pred             ChhhHh-------------------hhcCC---CCCHH--HHHHHHH--------------------HHHHHHHHHhh--
Q 046594          144 SLRWNL-------------------REKGG---PLDWE--KRLAIAL--------------------QIDSANQMVCM--  177 (304)
Q Consensus       144 sL~~~l-------------------~~~~~---~l~~~--~~~~i~~--------------------qi~~~l~~Lh~--  177 (304)
                      +|....                   +....   ++...  .......                    .+...++.|-.  
T Consensus        78 ~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (244)
T cd05150          78 PAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATR  157 (244)
T ss_pred             cHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhC
Confidence            776432                   11110   11100  0000000                    01111222211  


Q ss_pred             --cCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          178 --YSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       178 --~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                        .....++|+|+.|.|||++.++...|+||+.+..
T Consensus       158 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         158 PAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             CCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence              1235689999999999999987788999987753

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.17  E-value=7.8e-06  Score=68.95  Aligned_cols=143  Identities=15%  Similarity=0.166  Sum_probs=78.4

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCC--cccceeeeeeCC--CCceEEEEee
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHL--NIVTLLGYPQDG--LQRRCLVFEF  139 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~--niv~~~~~~~~~--~~~~~lv~e~  139 (304)
                      ++.++.|..+.+|.....    + ..+++|..........+..|.. ++.+...  -+.+++.+....  ....+++|++
T Consensus         2 i~~l~~G~~n~~~~v~~~----~-~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~   76 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTD----D-GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY   76 (239)
T ss_dssp             EEEEEESSSSEEEEEEET----T-SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEEC----C-cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence            457888999999887753    3 5899999876623335555555 6555433  245566543222  1234899999


Q ss_pred             cCCCChhh----------------Hh---hhc--C-CCCCHHH---------HHHH------------HHHHHH-HHHHH
Q 046594          140 MQRGSLRW----------------NL---REK--G-GPLDWEK---------RLAI------------ALQIDS-ANQMV  175 (304)
Q Consensus       140 ~~~gsL~~----------------~l---~~~--~-~~l~~~~---------~~~i------------~~qi~~-~l~~L  175 (304)
                      +++..+..                .+   +..  . .+.....         ....            ...+.. .++.+
T Consensus        77 i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (239)
T PF01636_consen   77 IPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQEL  156 (239)
T ss_dssp             ESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred             eccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHH
Confidence            99987776                11   111  0 0111100         0000            011222 23333


Q ss_pred             hh----cCCCCeeecCCCCCCeeeC-CCCCeeEccccccccc
Q 046594          176 CM----YSKPPIYHGNITSDNILLD-ELCNAKLAGFGAANYC  212 (304)
Q Consensus       176 h~----~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfgla~~~  212 (304)
                      +.    .....++|+|+.|.|||++ .++.+.|.||+.+...
T Consensus       157 ~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~  198 (239)
T PF01636_consen  157 EALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG  198 (239)
T ss_dssp             HHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred             HhhhccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence            32    2456799999999999999 6666689999877543

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.06  E-value=8.4e-05  Score=61.43  Aligned_cols=131  Identities=16%  Similarity=0.118  Sum_probs=87.1

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEecccc------------------chhHHHHHHH-hhCCC------CCcc
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA------------------SQTKLEEEIL-LKSSS------HLNI  119 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~------------------~~~~~~~e~~-l~~l~------h~ni  119 (304)
                      ...||+|+.-.+|.--      +....+||+.....                  ...+.++|+. ...+.      +.+|
T Consensus         6 ~~~i~~G~~R~cy~HP------~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i   79 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHP------DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHI   79 (199)
T ss_pred             CcccccCCCceEEECC------CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccc
Confidence            3568999998887643      23667889887766                  1124444444 44443      7889


Q ss_pred             cceeeeeeCCCCceEEEEeecCC------CChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCe
Q 046594          120 VTLLGYPQDGLQRRCLVFEFMQR------GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNI  193 (304)
Q Consensus       120 v~~~~~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Ni  193 (304)
                      .+++|+..++.+. -+|+|...+      .+|.+++...  .++. .....+.+.   .+||-+.   .|+.+|++|.||
T Consensus        80 ~r~~G~veT~~G~-Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~-~~~~~L~~f---~~~l~~~---~Iv~~dl~~~NI  149 (199)
T PF10707_consen   80 PRFYGFVETNLGL-GLVVELIRDADGNISPTLEDYLKEG--GLTE-ELRQALDEF---KRYLLDH---HIVIRDLNPHNI  149 (199)
T ss_pred             ccEeEEEecCCce-EEEEEEEECCCCCcCccHHHHHHcC--CccH-HHHHHHHHH---HHHHHHc---CCeecCCCcccE
Confidence            9999999988666 888887642      2678888554  3555 444444444   4456444   599999999999


Q ss_pred             eeCCC--C--CeeEcc-cccccc
Q 046594          194 LLDEL--C--NAKLAG-FGAANY  211 (304)
Q Consensus       194 ll~~~--~--~~kl~D-fgla~~  211 (304)
                      ++..+  +  .+.|+| ||-...
T Consensus       150 v~~~~~~~~~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  150 VVQRRDSGEFRLVLIDGLGEKEL  172 (199)
T ss_pred             EEEecCCCceEEEEEeCCCCccc
Confidence            99633  2  577887 665443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.06  E-value=4.7e-05  Score=64.85  Aligned_cols=32  Identities=22%  Similarity=0.497  Sum_probs=26.3

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ..+++|+|+.+.||+++.++...|.||+.+..
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            34589999999999998765567999997654

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=98.04  E-value=6.1e-05  Score=75.69  Aligned_cols=80  Identities=13%  Similarity=0.185  Sum_probs=51.8

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEecccc---chhHHHHHHH-hhCCC-CCcc--cceeeeeeCCC--CceEE
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA---SQTKLEEEIL-LKSSS-HLNI--VTLLGYPQDGL--QRRCL  135 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~-l~~l~-h~ni--v~~~~~~~~~~--~~~~l  135 (304)
                      .+.++.|.+..+|+....+. .....+++|+.....   ....+..|.. ++.+. |.++  .+++.+|.+..  +..|+
T Consensus        43 v~~l~gG~sn~ty~l~~~~~-~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNG-GSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             EEEeCCCCcCceEEEEECCC-CcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            56789999999998754321 011467778765432   1226677777 88885 6665  67777776531  23489


Q ss_pred             EEeecCCCCh
Q 046594          136 VFEFMQRGSL  145 (304)
Q Consensus       136 v~e~~~~gsL  145 (304)
                      ||||++|..+
T Consensus       122 VME~v~G~~~  131 (822)
T PLN02876        122 IMEYLEGRIF  131 (822)
T ss_pred             EEEecCCccc
Confidence            9999988643

>PRK10593 hypothetical protein; Provisional

Probab=97.96  E-value=0.00017  Score=63.75  Aligned_cols=78  Identities=12%  Similarity=0.061  Sum_probs=52.4

Q ss_pred             ccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCC---CcccceeeeeeCC--CCceEEE
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSH---LNIVTLLGYPQDG--LQRRCLV  136 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h---~niv~~~~~~~~~--~~~~~lv  136 (304)
                      ...+.||.|..+.||.....    + ..+.+|..+.......+..|.. |+.+.-   -.+.++++++...  .+.-++|
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~----~-~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV   91 (297)
T PRK10593         17 SRVECISEQPYAALWALYDS----Q-GNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL   91 (297)
T ss_pred             heeeecCCccceeEEEEEcC----C-CCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence            44678999999999987542    2 3466777544223447777777 877743   3567788776542  2323999


Q ss_pred             EeecCCCCh
Q 046594          137 FEFMQRGSL  145 (304)
Q Consensus       137 ~e~~~~gsL  145 (304)
                      ||+++++++
T Consensus        92 mE~i~G~~~  100 (297)
T PRK10593         92 LERLRGVSV  100 (297)
T ss_pred             EeccCCEec
Confidence            999998765

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.94  E-value=0.00013  Score=61.92  Aligned_cols=32  Identities=25%  Similarity=0.391  Sum_probs=27.5

Q ss_pred             CCeeecCCCCCCeeeCC-CCCeeEccccccccc
Q 046594          181 PPIYHGNITSDNILLDE-LCNAKLAGFGAANYC  212 (304)
Q Consensus       181 ~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~  212 (304)
                      .+++|+|+.+.|||++. ++.+.++||..|..-
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~  202 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYN  202 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcC
Confidence            46899999999999997 578999999877543

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.86  E-value=7.7e-06  Score=80.65  Aligned_cols=141  Identities=14%  Similarity=0.081  Sum_probs=95.3

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHH---HHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLE---EEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~---~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +.+.+.+-++.++.++.+.-.+..   ...+.|+......-.  +++   .+-. +-...+|.++...--+... ...+|
T Consensus       806 ~~i~~p~qS~sp~ss~p~~pa~sg---h~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~r-sP~~L  881 (1205)
T KOG0606|consen  806 FEITKPSQSGSPSSSFPASPAGSG---HTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCR-SPLPL  881 (1205)
T ss_pred             ceecccccCCCCcccccCCccccc---cccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCC-CCcch
Confidence            345567788889988887765542   333333332221111  111   1111 1112345555554443334 33499


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      +++|+.+++|...++..+ ..+..-+..+...+..+++|||..   .+.|+|++|.|.|...++..+++|||...
T Consensus       882 ~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~  952 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLS  952 (1205)
T ss_pred             hhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccc
Confidence            999999999999999887 677777778888899999999543   58999999999999999999999998544

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.84  E-value=0.00018  Score=62.06  Aligned_cols=135  Identities=13%  Similarity=0.096  Sum_probs=74.5

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCccc-ceeeeeeCCCCceEEEEeecCC
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIV-TLLGYPQDGLQRRCLVFEFMQR  142 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv-~~~~~~~~~~~~~~lv~e~~~~  142 (304)
                      .+..|-...+|+...     ++..+++|........-  ....|.. ++.+...+++ ++++.. .   . ++|+||++|
T Consensus         3 ~~~~G~tn~~y~~~~-----~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~-~---~-~~v~e~i~G   72 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH-----PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN-E---H-WLLVEWLEG   72 (256)
T ss_pred             cCCCcCcCCeEEEEe-----CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe-C---C-EEEEEeccC
Confidence            355677778887652     35678898765433221  3455555 6666544343 333332 2   3 799999998


Q ss_pred             CChhhH-----------------hhhcCC---CCCHHH-HHHHHHHH---------HHHHHHHhhc-----CCCCeeecC
Q 046594          143 GSLRWN-----------------LREKGG---PLDWEK-RLAIALQI---------DSANQMVCMY-----SKPPIYHGN  187 (304)
Q Consensus       143 gsL~~~-----------------l~~~~~---~l~~~~-~~~i~~qi---------~~~l~~Lh~~-----~~~~ivH~d  187 (304)
                      ..+...                 ++....   +++... ...+..++         ...+..+-..     -...++|+|
T Consensus        73 ~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~D  152 (256)
T TIGR02721        73 EVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMD  152 (256)
T ss_pred             cccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCC
Confidence            765421                 111110   122211 11211111         1111112111     123689999


Q ss_pred             CCCCCeeeCCCCCeeEccccccccc
Q 046594          188 ITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       188 lkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +.|.||+++.++ +.++||..+..-
T Consensus       153 l~~~Nil~~~~~-~~lIDwE~a~~g  176 (256)
T TIGR02721       153 VHAYNLVVTPQG-LKLIDWEYASDG  176 (256)
T ss_pred             CCcCcEEEeCCC-CEEEeccccCcC
Confidence            999999999877 789999877643

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.62  E-value=0.00042  Score=61.28  Aligned_cols=33  Identities=27%  Similarity=0.306  Sum_probs=28.4

Q ss_pred             CCCeeecCCCCCCeeeCCC----CCeeEccccccccc
Q 046594          180 KPPIYHGNITSDNILLDEL----CNAKLAGFGAANYC  212 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~----~~~kl~Dfgla~~~  212 (304)
                      ...++|+|+.+.|||++.+    +.++++||..|..-
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~  214 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYN  214 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCC
Confidence            4578999999999999975    88999999987644

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.53  E-value=0.0013  Score=54.19  Aligned_cols=122  Identities=20%  Similarity=0.249  Sum_probs=79.9

Q ss_pred             hhccccccCCccc-cceeeecceeecCCCcEEEEEEecc---ccc-------h-------------hHHHHHHH----hh
Q 046594           61 RRRMLKSFGDSVE-GLTLIKGDRAVSRNLTVVAVKARRY---MAS-------Q-------------TKLEEEIL----LK  112 (304)
Q Consensus        61 ~~~~~~~lg~g~~-g~v~~~~~~~~~~~~~~vavK~~~~---~~~-------~-------------~~~~~e~~----l~  112 (304)
                      .++.++.+|.|.. |.||++...     |..+|+|.+..   ...       .             +-|..|..    |+
T Consensus        38 ~I~flefLg~g~~~~~V~kv~I~-----g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLk  112 (207)
T PF13095_consen   38 DIEFLEFLGHGSHDGYVFKVEID-----GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLK  112 (207)
T ss_pred             cEeeeeecCCCCceeEEEEEEEC-----CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHH
Confidence            5788999999999 999998864     68999999321   000       0             02333433    55


Q ss_pred             CCCCCcc--cceeeeeeCC-----------------CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHH
Q 046594          113 SSSHLNI--VTLLGYPQDG-----------------LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQ  173 (304)
Q Consensus       113 ~l~h~ni--v~~~~~~~~~-----------------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~  173 (304)
                      ...+.++  |+++||..-.                 .....||.||.+...          .+.....    .++.+-|.
T Consensus       113 e~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~~----~~~~~dl~  178 (207)
T PF13095_consen  113 EAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRDI----PQMLRDLK  178 (207)
T ss_pred             hccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhHH----HHHHHHHH
Confidence            5566677  9999986321                 112357888876633          1233333    34444444


Q ss_pred             HHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          174 MVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       174 ~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      .+   |+.||+-+|+++.|..     .-+|+|||.+
T Consensus       179 ~~---~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  179 IL---HKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HH---HHCCeeeccCcccccc-----CCEEEecccC
Confidence            45   6669999999999997     4689999865

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.43  E-value=0.0016  Score=57.74  Aligned_cols=43  Identities=19%  Similarity=0.143  Sum_probs=32.7

Q ss_pred             HHHHHHHhh----cCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          169 DSANQMVCM----YSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       169 ~~~l~~Lh~----~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ...++++..    ....+++|+|+++.|++++.++...+.||+.+..
T Consensus       171 ~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       171 DKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             HHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence            344555532    2356899999999999999887778999998753

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.36  E-value=0.00028  Score=67.19  Aligned_cols=115  Identities=19%  Similarity=0.240  Sum_probs=73.3

Q ss_pred             HHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCCCccccc----------------Ccc----
Q 046594          167 QIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEK----------------TSE----  226 (304)
Q Consensus       167 qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~----------------~~~----  226 (304)
                      +++.||.|+|..  .++||++|.|++|.++.++..||+.|+++.-...........+                +++    
T Consensus       107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            445899999964  3799999999999999999999999998765544221000000                111    


Q ss_pred             ---ccccccc--------CCCCcceeccc-----------c-CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCH
Q 046594          227 ---MAEDIND--------FVGGQECLDQR-----------L-YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKI  283 (304)
Q Consensus       227 ---~s~DV~S--------~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~  283 (304)
                         ..+|+||        +..+..+++..           . ....-.+..+.+.++.+=+.+.+.     .++.-||++
T Consensus       185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~-----~~~~~rp~~  259 (700)
T KOG2137|consen  185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLN-----GDSAVRPTL  259 (700)
T ss_pred             cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhc-----CCcccCcch
Confidence               1188888        32233221111           0 000112334556778888889999     999999977


Q ss_pred             HHHHH
Q 046594          284 VDVLS  288 (304)
Q Consensus       284 ~~vl~  288 (304)
                      ..+..
T Consensus       260 ~~l~~  264 (700)
T KOG2137|consen  260 DLLLS  264 (700)
T ss_pred             hhhhc
Confidence            76643

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.33  E-value=0.0023  Score=56.27  Aligned_cols=141  Identities=13%  Similarity=0.091  Sum_probs=77.1

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCC--cccceeee-----eeCCCCceEEE
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHL--NIVTLLGY-----PQDGLQRRCLV  136 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~--niv~~~~~-----~~~~~~~~~lv  136 (304)
                      .+.+..|....+|+...     ++..+++|..... ....+..|.. +..+.+.  .+.+++..     ....++..+++
T Consensus        19 i~~i~~G~~n~~y~v~~-----~~~~~vLr~~~~~-~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l   92 (296)
T cd05153          19 FEGISAGIENTNYFVTT-----DSGRYVLTLFEKV-SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAAL   92 (296)
T ss_pred             eecccCccccceEEEEe-----CCCcEEEEEcCCC-ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEE
Confidence            56777787788887643     2357888987752 2223334444 4444322  23444332     11112334899


Q ss_pred             EeecCCCChhh----H----------hhhcCC----------CCCHHHHH----------HHHHHHHHHHHHHhh----c
Q 046594          137 FEFMQRGSLRW----N----------LREKGG----------PLDWEKRL----------AIALQIDSANQMVCM----Y  178 (304)
Q Consensus       137 ~e~~~~gsL~~----~----------l~~~~~----------~l~~~~~~----------~i~~qi~~~l~~Lh~----~  178 (304)
                      ++|++|..+..    .          ++....          ...|....          .....+..++.++..    .
T Consensus        93 ~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~  172 (296)
T cd05153          93 VEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSD  172 (296)
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhc
Confidence            99999876532    1          111000          01111110          011113334444432    1


Q ss_pred             CCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          179 SKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       179 ~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      -..+++|+|+.|.|++++.++.+.|.||+.+..
T Consensus       173 ~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         173 LPRGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            234799999999999999887778999987654

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK05231 homoserine kinase; Provisional

Probab=97.27  E-value=0.0052  Score=54.73  Aligned_cols=32  Identities=19%  Similarity=0.209  Sum_probs=26.9

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ..+++|+|+.|.||+++.+....++||+.+..
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            45899999999999999665568999998754

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.20  E-value=0.00034  Score=68.80  Aligned_cols=99  Identities=6%  Similarity=-0.040  Sum_probs=60.9

Q ss_pred             eecCCCCC-CeeeCCCCCeeEcccccccccCCCCC----CcccccCcc----------cc--ccccc-------------
Q 046594          184 YHGNITSD-NILLDELCNAKLAGFGAANYCSGGSN----RRNCEKTSE----------MA--EDIND-------------  233 (304)
Q Consensus       184 vH~dlkp~-Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~~~~~----------~s--~DV~S-------------  233 (304)
                      .+++..|. |++++..+..++.|||.++.......    ....++..|          ++  +||||             
T Consensus       499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~  578 (669)
T cd05610         499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIP  578 (669)
T ss_pred             CCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            45666666 67777777788899998876543322    111222222          22  89999             


Q ss_pred             -CCCCc------ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          234 -FVGGQ------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       234 -~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                       |....      .++.....+  ..........+.+++.+||.     .||.+||++.++++|
T Consensus       579 pf~~~~~~~~~~~il~~~~~~--p~~~~~~~~~~~~~l~~lL~-----~dP~~R~ta~e~l~h  634 (669)
T cd05610         579 PFNDETPQQVFQNILNRDIPW--PEGEEKLSVNAQNAIEILLT-----MDPTKRAGLKELKQH  634 (669)
T ss_pred             CCCCCCHHHHHHHHHhcCCCC--CcccccCCHHHHHHHHHHcc-----cChhHCcCHHHHHhC
Confidence             21111      122222211  11122445678899999999     999999999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.07  E-value=0.005  Score=53.81  Aligned_cols=33  Identities=24%  Similarity=0.414  Sum_probs=26.5

Q ss_pred             CCCeeecCCCCCCeeeCCCCC-eeEccccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCN-AKLAGFGAANYC  212 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~-~kl~Dfgla~~~  212 (304)
                      ...++|+|++|.|||++.++. .-|.||+.+..-
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            346899999999999997555 469999987543

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=97.03  E-value=0.0061  Score=55.01  Aligned_cols=143  Identities=15%  Similarity=0.108  Sum_probs=79.4

Q ss_pred             ccccCCccccceeeecceee-cCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCccc-ceeeeeeCCCCceEEEEeec
Q 046594           65 LKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIV-TLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv-~~~~~~~~~~~~~~lv~e~~  140 (304)
                      ...+-.|-.-.+|+....+. ...+..+++|......... ....|.. ++.+..-++. ++++.+..     ..|+||+
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~-----g~v~efi  115 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPN-----GRVEEFI  115 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECC-----ceEEEee
Confidence            34565677788888654221 1124688999887643222 3345555 6666544444 44555432     2579999


Q ss_pred             CCCChhhH-----------------hhhcCC-----CCCHHHHHHHHHHH-----------------HHHHHHHh----h
Q 046594          141 QRGSLRWN-----------------LREKGG-----PLDWEKRLAIALQI-----------------DSANQMVC----M  177 (304)
Q Consensus       141 ~~gsL~~~-----------------l~~~~~-----~l~~~~~~~i~~qi-----------------~~~l~~Lh----~  177 (304)
                      ++.+|...                 ++....     ...+.+...+..++                 ...+..|.    .
T Consensus       116 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~  195 (344)
T PLN02236        116 HARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSG  195 (344)
T ss_pred             CCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcc
Confidence            87666421                 111110     11123333332221                 11112221    1


Q ss_pred             -cCCCCeeecCCCCCCeeeCC-CCCeeEccccccccc
Q 046594          178 -YSKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYC  212 (304)
Q Consensus       178 -~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~  212 (304)
                       .+...++|+|+++.||++++ ++.+.++||..+..-
T Consensus       196 ~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~  232 (344)
T PLN02236        196 DDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN  232 (344)
T ss_pred             cCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence             23446899999999999986 468999999887654

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.01  E-value=0.00047  Score=60.55  Aligned_cols=124  Identities=15%  Similarity=0.124  Sum_probs=78.4

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccch-------------------h-----HHHHHHH-hhCCC-CCc
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-------------------T-----KLEEEIL-LKSSS-HLN  118 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-------------------~-----~~~~e~~-l~~l~-h~n  118 (304)
                      .++||-|.-+.+|...+.    +|++.++|.-+.....                   -     .-..|.. |+.+. |-.
T Consensus        97 GnqIGVGKESDIY~v~d~----~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   97 GNQIGVGKESDIYVVADE----EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             ccccccccccceEEEecC----CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            468899999999988774    6788888874321110                   0     1123333 44442 211


Q ss_pred             -ccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC
Q 046594          119 -IVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE  197 (304)
Q Consensus       119 -iv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~  197 (304)
                       +.+.++    .+.+ ++|||++.+-.|.+.-+-    .+..+...-+..+.--   |   ...|+||+|..-=||++++
T Consensus       173 pVPkpiD----~~RH-~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm~~Iv~---l---a~~GlIHgDFNEFNimv~d  237 (465)
T KOG2268|consen  173 PVPKPID----HNRH-CVVMELVDGYPLRQVRHV----EDPPTLYDDLMGLIVR---L---ANHGLIHGDFNEFNIMVKD  237 (465)
T ss_pred             CCCCccc----ccce-eeHHHhhcccceeeeeec----CChHHHHHHHHHHHHH---H---HHcCceecccchheeEEec
Confidence             222222    2356 899999998888765433    2334444333333332   4   4449999999999999999


Q ss_pred             CCCeeEcccc
Q 046594          198 LCNAKLAGFG  207 (304)
Q Consensus       198 ~~~~kl~Dfg  207 (304)
                      ++.++++||-
T Consensus       238 d~~i~vIDFP  247 (465)
T KOG2268|consen  238 DDKIVVIDFP  247 (465)
T ss_pred             CCCEEEeech
Confidence            9999999995

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.95  E-value=0.027  Score=51.75  Aligned_cols=72  Identities=18%  Similarity=0.091  Sum_probs=45.0

Q ss_pred             ccccCCccccceeeecceeecCCC-cEEEEEEeccc---------cchhHHHHHHH-hhCC---CCCcccceeeeeeCCC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNL-TVVAVKARRYM---------ASQTKLEEEIL-LKSS---SHLNIVTLLGYPQDGL  130 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~-~~vavK~~~~~---------~~~~~~~~e~~-l~~l---~h~niv~~~~~~~~~~  130 (304)
                      .+.+|.|.+..||+....    +| +.++||.....         ...++...|.. |+.+   ...++.+++.+..  +
T Consensus        31 ~~elggGn~N~VyrV~~~----~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~  104 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDT----EGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--E  104 (401)
T ss_pred             eeEcCCCceEEEEEEEeC----CCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--C
Confidence            467899999999988763    44 48999985421         01123333444 5544   2345666766633  2


Q ss_pred             CceEEEEeecCCC
Q 046594          131 QRRCLVFEFMQRG  143 (304)
Q Consensus       131 ~~~~lv~e~~~~g  143 (304)
                      .. ++||||+++.
T Consensus       105 ~~-~lVME~L~~~  116 (401)
T PRK09550        105 LA-VTVMEDLSDH  116 (401)
T ss_pred             CC-EEEEecCCCc
Confidence            44 8999999864

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.92  E-value=0.002  Score=53.84  Aligned_cols=30  Identities=30%  Similarity=0.503  Sum_probs=21.2

Q ss_pred             CeeecCCCCCCeee-CCCCCeeEcccccccc
Q 046594          182 PIYHGNITSDNILL-DELCNAKLAGFGAANY  211 (304)
Q Consensus       182 ~ivH~dlkp~Nill-~~~~~~kl~Dfgla~~  211 (304)
                      .+.|+|+.|.|||+ +.++.++++||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            57899999999999 7889999999988764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.87  E-value=0.11  Score=47.53  Aligned_cols=132  Identities=11%  Similarity=0.079  Sum_probs=82.4

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHHhhCC-CCCcccceeeee----e--CCCCceEEEE
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSS-SHLNIVTLLGYP----Q--DGLQRRCLVF  137 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~l~~l-~h~niv~~~~~~----~--~~~~~~~lv~  137 (304)
                      .+.||+|+.+.+|....-      .-.+-|+........+-+....|.+. .||-+..-+.+-    .  +.+...-+.|
T Consensus        16 gr~LgqGgea~ly~l~e~------~d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm   89 (637)
T COG4248          16 GRPLGQGGEADLYTLGEV------RDQVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM   89 (637)
T ss_pred             CccccCCccceeeecchh------hchhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence            468999999998854321      22345666544433322222223333 566544322221    1  1112235677


Q ss_pred             eecCCC-ChhhHhhh-----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          138 EFMQRG-SLRWNLRE-----KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       138 e~~~~g-sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                      ..+++. .+..+...     +.....|...++.++.++.+.+-||+.   |..-+|++++|+|+++++.+.|.|
T Consensus        90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVd  160 (637)
T COG4248          90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVD  160 (637)
T ss_pred             ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEc
Confidence            777653 22222221     122678999999999999999999775   899999999999999998888876

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.85  E-value=0.011  Score=51.91  Aligned_cols=73  Identities=14%  Similarity=0.167  Sum_probs=44.6

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCC---CCcccceeeeeeCCCCceEEEEee
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS---HLNIVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~---h~niv~~~~~~~~~~~~~~lv~e~  139 (304)
                      ..+.++.|....+|...     .+++.+.||.-. ......|+.|.. |+.+.   .-.+.+.+++....+.. +|++||
T Consensus        21 ~~~~v~GG~i~~a~~~~-----~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~-fLlle~   93 (288)
T PF03881_consen   21 SIEPVSGGDINEAYRLD-----TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDA-FLLLEF   93 (288)
T ss_dssp             EEEEE--SSSSEEEEEE-----TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCC-EEEEE-
T ss_pred             eeEecCCCChhheEEEE-----CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCc-eEEEEe
Confidence            35677878888887655     356899999988 333447777777 77773   34567888887776566 999999


Q ss_pred             cCCC
Q 046594          140 MQRG  143 (304)
Q Consensus       140 ~~~g  143 (304)
                      ++.+
T Consensus        94 l~~~   97 (288)
T PF03881_consen   94 LEMG   97 (288)
T ss_dssp             ----
T ss_pred             ecCC
Confidence            9876

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.83  E-value=0.01  Score=53.20  Aligned_cols=143  Identities=17%  Similarity=0.165  Sum_probs=76.7

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCccc-ceeeeeeCCCCceEEEEeecCC
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIV-TLLGYPQDGLQRRCLVFEFMQR  142 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv-~~~~~~~~~~~~~~lv~e~~~~  142 (304)
                      +.+..|-...+|+....+...++..+++|+.......- ....|.. ++.+..-++. ++++++. +    .+|.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~----G~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFG-N----GMIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeC-C----cEeehhhcC
Confidence            45555666677776543221123478899886543322 3345555 6666555554 4555542 2    258899977


Q ss_pred             CChhh--------------H---hhhcCC-----CCCHHHHHHHHHHH----------------------HHHHHHHhhc
Q 046594          143 GSLRW--------------N---LREKGG-----PLDWEKRLAIALQI----------------------DSANQMVCMY  178 (304)
Q Consensus       143 gsL~~--------------~---l~~~~~-----~l~~~~~~~i~~qi----------------------~~~l~~Lh~~  178 (304)
                      ..|..              .   ++....     +-.+.....+..++                      ..-+..+...
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            65531              0   111110     11223322222221                      1111112111


Q ss_pred             -----CCCCeeecCCCCCCeeeCC-CCCeeEcccccccccC
Q 046594          179 -----SKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYCS  213 (304)
Q Consensus       179 -----~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~~  213 (304)
                           ....+.|.|+.+.|||+++ ++.++++||..|..-.
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd  215 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSY  215 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCc
Confidence                 1123689999999999974 5789999999886543

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.54  E-value=0.017  Score=51.22  Aligned_cols=33  Identities=21%  Similarity=0.454  Sum_probs=28.6

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ..+++|+|+.+.|+|++.++.+.++||..+...
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d  227 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASFA  227 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhcccC
Confidence            457999999999999999999999999876543

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.52  E-value=0.0014  Score=62.24  Aligned_cols=139  Identities=14%  Similarity=0.009  Sum_probs=91.5

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCc-ccceeeeeeCCCCceEEEEee
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLN-IVTLLGYPQDGLQRRCLVFEF  139 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~n-iv~~~~~~~~~~~~~~lv~e~  139 (304)
                      +...+.+++++.+.+++++...+    +....+.+...   ...+-++. |.+++||| .++.++-+... ...++.+++
T Consensus       244 s~~fh~fvK~altknpKkRptae----klL~h~fvs~~---l~~rl~~eLLdK~n~P~~~v~~~~d~~~E-~~~~i~~~i  315 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAE----KLLQHPFVSQT---LSRRLAIELLDKVNNPNPVVRYLEDYDGE-DYLWIPMRI  315 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChh----hheeceeeccc---hhhHHHHHHHHHccCCCCcccccccCCcc-cccchhhhh
Confidence            34456789999999999887543    22235554433   23344555 99999999 66666655555 445899999


Q ss_pred             cCCC-ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          140 MQRG-SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       140 ~~~g-sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      +.++ +-...+....-.+...+...+.+.-.++++++|+.   --+|+|    ||+..+ +..+..||+....+....
T Consensus       316 ~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~  385 (829)
T KOG0576|consen  316 CSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM  385 (829)
T ss_pred             hcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc
Confidence            9877 33322222221344555566667777888888654   247888    777655 678999999888776653

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.50  E-value=0.012  Score=52.70  Aligned_cols=77  Identities=25%  Similarity=0.169  Sum_probs=56.7

Q ss_pred             CCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          128 DGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       128 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                      ++....|++|++. |++|...-     .-.+++...++.+.+..+.-+-.  +-..=|||+.-.||||+ +|++.|+||-
T Consensus       296 de~~y~yl~~kdh-gt~is~ik-----~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfk  366 (488)
T COG5072         296 DETLYLYLHFKDH-GTPISIIK-----ADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFK  366 (488)
T ss_pred             CCceEEEEEEecC-Cceeeeee-----cccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEee
Confidence            3334457788876 55665322     24678889999988887655532  23678999999999999 9999999999


Q ss_pred             cccccC
Q 046594          208 AANYCS  213 (304)
Q Consensus       208 la~~~~  213 (304)
                      +++.-.
T Consensus       367 lsRl~~  372 (488)
T COG5072         367 LSRLSY  372 (488)
T ss_pred             eeeccc
Confidence            998543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.47  E-value=0.0048  Score=62.41  Aligned_cols=172  Identities=15%  Similarity=0.102  Sum_probs=108.6

Q ss_pred             HHHH-hhCCCCCcccceeeeeeCCCC---ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046594          107 EEIL-LKSSSHLNIVTLLGYPQDGLQ---RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP  182 (304)
Q Consensus       107 ~e~~-l~~l~h~niv~~~~~~~~~~~---~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~  182 (304)
                      -|.. +.+..|+|++.+++|......   .+.+..|++..-++...+...+ ..+..+.+.+..+...||+|+|..+   
T Consensus       231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~-~i~~~~~r~~~~~~~~GL~~~h~~~---  306 (1351)
T KOG1035|consen  231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG-SIPLETLRILHQKLLEGLAYLHSLS---  306 (1351)
T ss_pred             HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc-ccCHHHHHHHHHHHhhhHHHHHHhc---
Confidence            3444 888899999999999765422   2235567888888888887776 7899999999999999999998862   


Q ss_pred             eeecCCCCC---CeeeCCCCCeeEc--ccccccccCCCCC-Cccccc------------Ccccc--cccccCCCCc----
Q 046594          183 IYHGNITSD---NILLDELCNAKLA--GFGAANYCSGGSN-RRNCEK------------TSEMA--EDINDFVGGQ----  238 (304)
Q Consensus       183 ivH~dlkp~---Nill~~~~~~kl~--Dfgla~~~~~~~~-~~~~~~------------~~~~s--~DV~S~~~~~----  238 (304)
                      ..|.-+..+   +.-.+.++...++  ||+..+....... ......            ....+  .|+|......    
T Consensus       307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~  386 (1351)
T KOG1035|consen  307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLS  386 (1351)
T ss_pred             cceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhh
Confidence            333333333   4444555666666  8888776654333 111111            11111  6888721111    


Q ss_pred             ---ce--eccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          239 ---EC--LDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       239 ---~~--~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                         .+  .....   ..-.+........+...+|+.     .++++|+++.+++.+.
T Consensus       387 ~~~~i~~~~~~~---~~~l~~~~~~~~~d~~~~~~~-----~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  387 QGEDISEKSAVP---VSLLDVLSTSELLDALPKCLD-----EDSEERLSALELLTHP  435 (1351)
T ss_pred             hcCcccccccch---hhhhccccchhhhhhhhhhcc-----hhhhhccchhhhhhch
Confidence               00  00000   011111122257788889999     9999999999999865

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.46  E-value=0.032  Score=50.19  Aligned_cols=136  Identities=15%  Similarity=0.095  Sum_probs=85.3

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccch----h-------HH-----------------HHHHH-hhCCCCC
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----T-------KL-----------------EEEIL-LKSSSHL  117 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~-------~~-----------------~~e~~-l~~l~h~  117 (304)
                      .|..|--+.||.+.    ..+|..+|||+.+.....    +       +|                 +.|+. |.+++..
T Consensus       151 CiSTGKEANVYHat----~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  151 CISTGKEANVYHAT----EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             ccccCccceeEeee----cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            45667777787654    468899999997642110    0       11                 12233 4444433


Q ss_pred             cccceeeeeeCCCCceEEEEeecCCCCh-hhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC
Q 046594          118 NIVTLLGYPQDGLQRRCLVFEFMQRGSL-RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD  196 (304)
Q Consensus       118 niv~~~~~~~~~~~~~~lv~e~~~~gsL-~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~  196 (304)
                      .| ++-.-..-. ++ .|||+|+..... .-.|...  .++...+..+-.|++.-|.-|.+.+  ++||.||.--|+|+-
T Consensus       227 GI-P~PePIlLk-~h-VLVM~FlGrdgw~aPkLKd~--~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh  299 (520)
T KOG2270|consen  227 GI-PCPEPILLK-NH-VLVMEFLGRDGWAAPKLKDA--SLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH  299 (520)
T ss_pred             CC-CCCCceeee-cc-eEeeeeccCCCCcCcccccc--cCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE
Confidence            32 111111111 45 799999963222 2223332  5777778888888888888887655  799999999999985


Q ss_pred             CCCCeeEcccccccccCC
Q 046594          197 ELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       197 ~~~~~kl~Dfgla~~~~~  214 (304)
                       +|.+.|+|.+-+.....
T Consensus       300 -dG~lyiIDVSQSVE~DH  316 (520)
T KOG2270|consen  300 -DGKLYIIDVSQSVEHDH  316 (520)
T ss_pred             -CCEEEEEEccccccCCC
Confidence             46899999987655443

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.40  E-value=0.047  Score=48.46  Aligned_cols=34  Identities=18%  Similarity=0.329  Sum_probs=29.3

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ...++|+|+++.|++++.++.+-+.||+++..-.
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD  230 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence            3568999999999999988889999999886543

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.40  E-value=0.081  Score=48.63  Aligned_cols=70  Identities=10%  Similarity=0.127  Sum_probs=44.3

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccc----------cchhHHHHHHH-hhCC---CCCcccceeeeeeCC
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYM----------ASQTKLEEEIL-LKSS---SHLNIVTLLGYPQDG  129 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~e~~-l~~l---~h~niv~~~~~~~~~  129 (304)
                      ..+.+|.|....||+....     +..++||.....          ...+.+.+ .. |+.+   ...++.+++.++.+ 
T Consensus        36 ~~~eiggGn~N~VyrV~~~-----~~svVVKqa~p~~r~vga~wpl~~~R~~~E-a~aL~~~~~~~p~~VPkVy~~ded-  108 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS-----SGSFVIKQALPYIRCIGESWPMTKERAYFE-ATALREHGRLCPDHVPEVYHFDRT-  108 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC-----CccEEEEeCCccccCCCccccCCccHHHHH-HHHHHHhhhcCCCCCCeEEEECCC-
Confidence            3567899999999987652     356889987621          11112222 33 4433   23467778888774 


Q ss_pred             CCceEEEEeecCC
Q 046594          130 LQRRCLVFEFMQR  142 (304)
Q Consensus       130 ~~~~~lv~e~~~~  142 (304)
                       .. +++||++++
T Consensus       109 -~~-vlvME~L~~  119 (418)
T PLN02756        109 -MA-LIGMRYLEP  119 (418)
T ss_pred             -CC-EEEEeecCC
Confidence             34 899999976

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=95.79  E-value=0.13  Score=46.53  Aligned_cols=32  Identities=28%  Similarity=0.385  Sum_probs=25.9

Q ss_pred             CCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          179 SKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       179 ~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ....++|||+.+.||+++.++ ++++|+.++..
T Consensus       190 ~~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~  221 (370)
T TIGR01767       190 SAETLLHGDLHSGSIFVSEHE-TKVIDPEFAFY  221 (370)
T ss_pred             CcceeeeccCCcccEEEcCCC-CEEEcCccccc
Confidence            445789999999999998764 77999876654

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=95.56  E-value=0.043  Score=45.94  Aligned_cols=99  Identities=14%  Similarity=0.049  Sum_probs=59.8

Q ss_pred             EEEEEEeccccch--h-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHH
Q 046594           90 VVAVKARRYMASQ--T-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIA  165 (304)
Q Consensus        90 ~vavK~~~~~~~~--~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~  165 (304)
                      +..+|++..-...  + .|..++. ++++.  .|+++..   +.+..+-++.|+|-....              ....++
T Consensus        87 ~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~N---Dn~~~yGvIlE~Cy~~~i--------------~~~N~i  147 (308)
T PF07387_consen   87 PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKN---DNNYKYGVILERCYKIKI--------------NFSNFI  147 (308)
T ss_pred             hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeec---CCCceeEEEEeeccCccc--------------chhHHH
Confidence            3445555443332  1 5555555 65553  4566552   233345688998843111              011122


Q ss_pred             HHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          166 LQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       166 ~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      ..-+.+|.-.|+.+ .+.+|+|-.|+||+-|..|.+||.|-+.
T Consensus       148 ~agi~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  148 TAGIKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHhHHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhh
Confidence            22245666677643 4799999999999999999999999763

The function of this family is unknown.

>PTZ00384 choline kinase; Provisional

Probab=95.53  E-value=0.14  Score=46.91  Aligned_cols=31  Identities=19%  Similarity=0.164  Sum_probs=25.3

Q ss_pred             CCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          181 PPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       181 ~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ....|.|+-+.||+.+.+ .++++||..|..-
T Consensus       227 ~VfCHNDL~~gNIL~~~~-~l~lID~EYA~~n  257 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFNQ-GIYFIDFDFAGFN  257 (383)
T ss_pred             eeeeeccCCcccEEecCC-CEEEEEeccccCC
Confidence            467899999999997654 6999999877643

>PTZ00296 choline kinase; Provisional

Probab=95.21  E-value=0.21  Score=46.72  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=25.2

Q ss_pred             CCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          181 PPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       181 ~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ..+.|.|+-+.|||.+.+ .++++||..|..-
T Consensus       284 ~VfCHNDl~~~NiL~~~~-~l~LIDfEYAg~n  314 (442)
T PTZ00296        284 IVFCHNDLQENNIINTNK-CLRLIDFEYSGYN  314 (442)
T ss_pred             eeEEeCCCCccceeecCC-CEEEEeecccccc
Confidence            457899999999988755 4999999877643

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=95.10  E-value=0.12  Score=44.37  Aligned_cols=78  Identities=17%  Similarity=0.022  Sum_probs=53.5

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHHhhCCCCCcccceeeeeeCCCCceEEEEeec-CC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFM-QR  142 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~-~~  142 (304)
                      ...+..|..+.|+.+..    .+|++.++|+........ +...+..|+..+-...|++++.-...  . .+.+|.+ ++
T Consensus         7 ~~~~~~g~~s~V~pv~~----~dG~~avLKl~~p~~~~~~E~~g~~~L~~w~G~GaVrll~~d~~~--~-AlLLErl~~g   79 (253)
T PF04655_consen    7 DGPPAHGSSSLVVPVRR----ADGTPAVLKLAPPHAEAEHEARGEAALRWWNGRGAVRLLAADPER--G-ALLLERLDPG   79 (253)
T ss_pred             CCCCCCCcceEEEEEEc----CCCCeEEEEecCCcccchhhhhHHhHhheeCCCCceeeecccccc--c-hhhhhhccCC
Confidence            34566778888877763    478999999987654322 22223338888888899999886443  2 7888998 55


Q ss_pred             CChhhHh
Q 046594          143 GSLRWNL  149 (304)
Q Consensus       143 gsL~~~l  149 (304)
                      .+|.++.
T Consensus        80 ~~L~~~~   86 (253)
T PF04655_consen   80 RSLASLP   86 (253)
T ss_pred             Cchhhcc
Confidence            5776554

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.89  E-value=0.48  Score=40.09  Aligned_cols=134  Identities=18%  Similarity=0.214  Sum_probs=77.6

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCC---CcccceeeeeeCCCCceEEEEeec
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSH---LNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h---~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      .+.+.-|..-..|...+     ...++.||+-.... ...|..|+. |..+.-   -++.+.+.+..+.+.. |+|+||+
T Consensus        21 r~~v~gG~inea~~v~d-----g~~~~FvK~n~~~~-~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~s-ylVle~L   93 (286)
T COG3001          21 REEVSGGDINEAWRLRD-----GTDPFFVKCNQREQ-LSMFTAEADGLELLARSNTITVPKVIAVGASRDHS-YLVLEYL   93 (286)
T ss_pred             ccccCCccccceeEeec-----CCcceEEEecchhh-HHHHHHHHHHHHHHHhcCCccccceEEecCCCCee-EEEEeec
Confidence            34454555545554443     24688898765432 236666666 766644   4566777777776555 9999999


Q ss_pred             CCCChhh-----------HhhhcC-----------------CCCCHH---------HHHHHHHH--------------HH
Q 046594          141 QRGSLRW-----------NLREKG-----------------GPLDWE---------KRLAIALQ--------------ID  169 (304)
Q Consensus       141 ~~gsL~~-----------~l~~~~-----------------~~l~~~---------~~~~i~~q--------------i~  169 (304)
                      +-|.+..           .|+.-+                 .+-+|.         +++.+-.|              ++
T Consensus        94 ~~~~~d~~~~~~~GqqLA~LH~~~~~~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlqlar~rg~~f~did~~~  173 (286)
T COG3001          94 PTGPLDAHSAFILGQQLARLHQWGGQAQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQLARERGLTFGDIDAIV  173 (286)
T ss_pred             cCCCCCchhHHHHHHHHHHHHhhcCccccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHHHHHhCCCccCHHHHH
Confidence            9876651           111110                 011221         12222222              22


Q ss_pred             HHHHHHhhcCC--CCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          170 SANQMVCMYSK--PPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       170 ~~l~~Lh~~~~--~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      ..+.-+=..|+  +..+|+||-..|+....+| +.+.|-
T Consensus       174 ~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fDP  211 (286)
T COG3001         174 EKIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFDP  211 (286)
T ss_pred             HHHHHHHhcCCCCcceeecccccccccccCCC-Ceeecc
Confidence            23333333355  7899999999999999998 767653

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=94.72  E-value=0.048  Score=49.75  Aligned_cols=61  Identities=15%  Similarity=0.003  Sum_probs=43.7

Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL  198 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~  198 (304)
                      .++-+|..|-++..++...+  .++.....++.-...|+--+-..  .+++|.|++|.||++-.+
T Consensus       321 vl~E~~~~Gl~v~~~v~~~~--~pe~l~kkva~lg~~AllkMl~v--DNFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  321 VLVETYERGLSVLRFVKWKS--QPEALVKKVAKLGVNALLKMLIV--DNFVHADLHPGNVLIRFN  381 (565)
T ss_pred             eeeeeccccccHHhhhhccc--ChHHHHHHHHHHHHHHHHHHHHh--hcceecccCCCcEEEEec
Confidence            67778888889999888765  45556666666555665433322  379999999999999643

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.51  E-value=0.086  Score=46.59  Aligned_cols=31  Identities=19%  Similarity=0.259  Sum_probs=26.5

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ..+++|+|+.+.||+++. +.+.|.||+.+..
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            458999999999999987 6789999986653

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]

Probab=94.35  E-value=0.23  Score=43.33  Aligned_cols=29  Identities=24%  Similarity=0.481  Sum_probs=24.4

Q ss_pred             eeecCCCCCCeeeC-CCCCeeEcccccccc
Q 046594          183 IYHGNITSDNILLD-ELCNAKLAGFGAANY  211 (304)
Q Consensus       183 ivH~dlkp~Nill~-~~~~~kl~Dfgla~~  211 (304)
                      +.|.||=..||+.| +.+.+.++||..+..
T Consensus       250 FcHNDLL~~Niiy~~~~~~v~fIDYEYa~y  279 (391)
T KOG4720|consen  250 FCHNDLLCGNIIYDSEKGSVEFIDYEYAGY  279 (391)
T ss_pred             EeecchhhcceeeccccCcEEEEeeccccc
Confidence            35999999999998 468999999987653

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.23  E-value=0.1  Score=46.72  Aligned_cols=28  Identities=32%  Similarity=0.650  Sum_probs=25.3

Q ss_pred             eeecCCCCCCeeeCCCCC-eeEccccccc
Q 046594          183 IYHGNITSDNILLDELCN-AKLAGFGAAN  210 (304)
Q Consensus       183 ivH~dlkp~Nill~~~~~-~kl~Dfgla~  210 (304)
                      +||+|+.|.||+++.+.. ..+.||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            899999999999998875 8899999765

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.17  E-value=0.037  Score=45.18  Aligned_cols=30  Identities=13%  Similarity=0.143  Sum_probs=25.8

Q ss_pred             CeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          182 PIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       182 ~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ..+|+|+.|.|++++.++ ++++||+.+..-
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~g  107 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDG  107 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCC
Confidence            468999999999998877 999999987543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	304
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-09
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-09
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-09
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		7e-09
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-08
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-08
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-06
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-05
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-05
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-05
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-05
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		3e-05
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		4e-05
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-05
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		5e-05
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		5e-05
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		5e-05
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		5e-05
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		6e-05
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		6e-05
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		6e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		9e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-04
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-04
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-04
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		3e-04
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-04
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		6e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		6e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		9e-04

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 87  NLTVVAVKARRYMASQT------KLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
           N T VAVK    M   T      + ++EI ++    H N+V LLG+  DG    CLV+ +
Sbjct: 47  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG-DDLCLVYVY 105
Query: 140 MQRGSL--RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
           M  GSL  R +  +   PL W  R  IA    +AN +  ++    I H +I S NILLDE
Sbjct: 106 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDE 162
Query: 198 LCNAKLAGFGAA 209
              AK++ FG A
Sbjct: 163 AFTAKISDFGLA 174

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 87  NLTVVAVKARRYMASQT------KLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
           N T VAVK    M   T      + ++EI ++    H N+V LLG+  DG    CLV+ +
Sbjct: 53  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG-DDLCLVYVY 111
Query: 140 MQRGSL--RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
           M  GSL  R +  +   PL W  R  IA    +AN +  ++    I H +I S NILLDE
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDE 168
Query: 198 LCNAKLAGFGAA 209
              AK++ FG A
Sbjct: 169 AFTAKISDFGLA 180

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 87  NLTVVAVKARRYMASQT------KLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
           N T VAVK    M   T      + ++EI ++    H N+V LLG+  DG    CLV+ +
Sbjct: 53  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG-DDLCLVYVY 111
Query: 140 MQRGSL--RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
           M  GSL  R +  +   PL W  R  IA    +AN +  ++    I H +I S NILLDE
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDE 168
Query: 198 LCNAKLAGFGAA 209
              AK++ FG A
Sbjct: 169 AFTAKISDFGLA 180

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 87  NLTVVAVKARRYMASQT------KLEEEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEF 139
           N T VAVK    M   T      + ++EI + +   H N+V LLG+  DG    CLV+ +
Sbjct: 44  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDG-DDLCLVYVY 102
Query: 140 MQRGSL--RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
              GSL  R +  +   PL W  R  IA    +AN +  ++    I H +I S NILLDE
Sbjct: 103 XPNGSLLDRLSCLDGTPPLSWHXRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDE 159
Query: 198 LCNAKLAGFGAA 209
              AK++ FG A
Sbjct: 160 AFTAKISDFGLA 171

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 89  TVVAVK---ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           T+VAVK     R    + + + E+ ++  + H N++ L G+     +R  LV+ +M  GS
Sbjct: 63  TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-LLVYPYMANGS 121
Query: 145 LRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
           +   LRE+     PLDW KR  IAL        +  +  P I H ++ + NILLDE   A
Sbjct: 122 VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 181
Query: 202 KLAGFGAAN 210
            +  FG A 
Sbjct: 182 VVGDFGLAK 190

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 79  KGDRAVSRNLTVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVF 137
           KG  A    + V  +K  R    + + + E+ ++  + H N++ L G+     +R  LV+
Sbjct: 48  KGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-LLVY 106
Query: 138 EFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
            +M  GS+   LRE+     PLDW KR  IAL        +  +  P I H ++ + NIL
Sbjct: 107 PYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 166
Query: 195 LDELCNAKLAGFGAAN 210
           LDE   A +  FG A 
Sbjct: 167 LDEEFEAVVGDFGLAK 182

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E  ++K   H NIV  +G          +V E++ RGSL   L + G     ++R  +
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQP-PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 165 ALQIDSANQMVCMYSK-PPIYHGNITSDNILLDELCNAKLAGFG 207
           ++  D A  M  ++++ PPI H N+ S N+L+D+    K+  FG
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG 184

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 74  GLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE----------EEILLKSSSHLNIVTLL 123
           G  L+   R V ++ +VVA+K+     S+ + E          E  ++ + +H NIV L 
Sbjct: 31  GFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
           G   +  +   +V EF+  G L   L +K  P+ W  +L + L I    + +     PPI
Sbjct: 90  GLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPI 145
Query: 184 YHGNITSDNILLDELCN-----AKLAGFGAA 209
            H ++ S NI L  L       AK+A FG +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E  ++K   H NIV  +G          +V E++ RGSL   L + G     ++R  +
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQP-PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 165 ALQIDSANQMVCMYSK-PPIYHGNITSDNILLDELCNAKLAGFG 207
           ++  D A  M  ++++ PPI H ++ S N+L+D+    K+  FG
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFG 184

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRC---LVFEFMQRGSLRWNLREKGGPLDWEKRL 162
           E +IL K S H NI+ L    +D  +      LVF+ M++G L   L EK    + E R 
Sbjct: 73  EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN-C 221
            +   +    +++C   K  I H ++  +NILLD+  N KL  FG +     G   R+ C
Sbjct: 129 IMRALL----EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC 184
Query: 222 EKTSEMAEDI 231
              S +A +I
Sbjct: 185 GTPSYLAPEI 194

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 19  YIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLI 78
           YIA   N  +     QF    VG +           T  +LKR + LK  G   +G+   
Sbjct: 32  YIAKHYNMSKSKVDNQFYSVEVGDS-----------TFTVLKRYQNLKPIGSGAQGIVCA 80
Query: 79  KGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLLGY--PQDGL-- 130
             D  + RN+ +   K  R   +QT       E +L+K  +H NI++LL    PQ  L  
Sbjct: 81  AYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC---MYSKPPIYHG 186
            Q   LV E M     +    E    LD E R++  L      QM+C         I H 
Sbjct: 139 FQDVYLVMELMDANLCQVIQME----LDHE-RMSYLLY-----QMLCGIKHLHSAGIIHR 188
Query: 187 NITSDNILLDELCNAKLAGFGAA 209
           ++   NI++   C  K+  FG A
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLA 211

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 74  GLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE----------EEILLKSSSHLNIVTLL 123
           G  L+   R V ++ +VVA+K+     S+ + E          E  ++ + +H NIV L 
Sbjct: 31  GFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
           G   +  +   +V EF+  G L   L +K  P+ W  +L + L I    + +     PPI
Sbjct: 90  GLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPI 145
Query: 184 YHGNITSDNILLDELCN-----AKLAGFG 207
            H ++ S NI L  L       AK+A FG
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFG 174

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRC---LVFEFMQRGSLRWNLREKGGPLDWEKRL 162
           E +IL K S H NI+ L    +D  +      LVF+ M++G L   L EK    + E R 
Sbjct: 73  EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN-C 221
            +   +    +++C   K  I H ++  +NILLD+  N KL  FG +     G   R  C
Sbjct: 129 IMRALL----EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 184
Query: 222 EKTSEMAEDI 231
              S +A +I
Sbjct: 185 GTPSYLAPEI 194

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRRC---LVFEFMQRGSLRWNLREKGGPLDWEKRL 162
           E +IL K S H NI+ L    +D  +      LVF+ M++G L   L EK    + E R 
Sbjct: 60  EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 115
Query: 163 AIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRN-C 221
            +   +    +++C   K  I H ++  +NILLD+  N KL  FG +     G   R  C
Sbjct: 116 IMRALL----EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 171
Query: 222 EKTSEMAEDI 231
              S +A +I
Sbjct: 172 GTPSYLAPEI 181

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 19  YIASPVNRGEQNYGCQFVITIVGSAAVARSVSIALVTLAILKRRRMLKSFGDSVEGLTLI 78
           YIA   N  +     QF    VG +           T  +LKR + LK  G   +G+   
Sbjct: 32  YIAKHYNMSKSKVDNQFYSVEVGDS-----------TFTVLKRYQNLKPIGSGAQGIVCA 80
Query: 79  KGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLLGY--PQDGL-- 130
             D  + RN+ +   K  R   +QT       E +L+K  +H NI++LL    PQ  L  
Sbjct: 81  AYDAVLDRNVAI--KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC---MYSKPPIYHG 186
            Q   LV E M     +    E    LD E R++  L      QM+C         I H 
Sbjct: 139 FQDVYLVMELMDANLCQVIQME----LDHE-RMSYLLY-----QMLCGIKHLHSAGIIHR 188
Query: 187 NITSDNILLDELCNAKLAGFGAA 209
           ++   NI++   C  K+  FG A
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLA 211

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 82  RAVSRNLTVVAVKARRYMASQ---TKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
           + V R+   VA+K R   +SQ       E   L    H ++V+L+G+  D      L+++
Sbjct: 57  KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-CDERNEMILIYK 115
Query: 139 FMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL 195
           +M+ G+L+ +L     P   + WE+RL I   I +A  +  ++++  I H ++ S NILL
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEIC--IGAARGLHYLHTRA-IIHRDVKSINILL 172
Query: 196 DELCNAKLAGFG 207
           DE    K+  FG
Sbjct: 173 DENFVPKITDFG 184

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 82  RAVSRNLTVVAVKARRYMASQ---TKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
           + V R+   VA+K R   +SQ       E   L    H ++V+L+G+  D      L+++
Sbjct: 57  KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-CDERNEMILIYK 115
Query: 139 FMQRGSLRWNLREKGGP---LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL 195
           +M+ G+L+ +L     P   + WE+RL I   I +A  +  ++++  I H ++ S NILL
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEIC--IGAARGLHYLHTRA-IIHRDVKSINILL 172
Query: 196 DELCNAKLAGFG 207
           DE    K+  FG
Sbjct: 173 DENFVPKITDFG 184

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 75/178 (42%), Gaps = 24/178 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +A  T  +LKR + LK  G   +G+     D  +  N+ V   K  R   +QT    
Sbjct: 10  SVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKR 67
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +LLK  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 68  AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDH 123
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS 213
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A   S
Sbjct: 124 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +A  T  +LKR + LK  G   +G+     D  +  N+ V   K  R   +QT    
Sbjct: 12  SVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +LLK  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 70  AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 11  SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 68
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 69  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 124
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 125 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 70  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 13  SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 70
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 71  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 126
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 127 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 13  SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 70
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 71  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 126
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 127 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 70  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 6   SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 63
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 64  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 119
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 120 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 5   SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 62
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 63  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 118
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 119 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 6   SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 63
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 64  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 119
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 120 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 20/148 (13%)
Query: 74  GLTLIKGDRAVSRNLTVVAVKARRYMASQTKLE----------EEILLKSSSHLNIVTLL 123
           G  L+   R V ++ +VVA+K+     S+ + E          E  ++ + +H NIV L 
Sbjct: 31  GFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
           G   +  +   +V EF+  G L   L +K  P+ W  +L + L I    + +     PPI
Sbjct: 90  GLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPI 145
Query: 184 YHGNITSDNILLDELCN-----AKLAGF 206
            H ++ S NI L  L       AK+A F
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADF 173

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 70  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 70  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 14  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 71
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 72  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 127
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 128 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 13  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 70
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 71  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 126
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 127 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 6   SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 63
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 64  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 119
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 120 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 70  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 70  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 17  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 74
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 75  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 130
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 131 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 30/177 (16%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKR 161
              E +L+K  +H NI+ LL    PQ  L+    V+  M+              +D    
Sbjct: 70  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-------------MDANLS 116
Query: 162 LAIALQIDSAN------QMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
             I +++D         QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV I   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI+ LL    PQ  L   Q   +V E M     +    E    LD 
Sbjct: 70  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++   C  K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 197
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 198 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 239

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 79  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 139 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 180

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 80  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 139
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 140 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 181

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 80  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 139
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 140 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 181

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 79  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 139 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 180

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 77  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 136
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK  + H ++ + N +LDE    K+A FG A
Sbjct: 137 GLQV--AKGMKFLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 178

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 84  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 143
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 144 GLQV--AKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 185

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 78  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 137
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 138 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 179

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 98  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 157
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 158 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 199

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 78  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 137
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK  + H ++ + N +LDE    K+A FG A
Sbjct: 138 GLQV--AKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 179

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 97  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 156
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 157 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 198

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 76  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 135
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 136 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 177

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 71  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 130
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 131 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 172

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 79  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK  + H ++ + N +LDE    K+A FG A
Sbjct: 139 GLQV--AKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 180

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 77  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 136
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK  + H ++ + N +LDE    K+A FG A
Sbjct: 137 GLQV--AKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 178

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 79  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 138
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK    H ++ + N +LDE    K+A FG A
Sbjct: 139 GLQV--AKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA 180

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
           L E I++K  SH N+++LLG          +V  +M+ G LR  +R +      +  +  
Sbjct: 74  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 133
Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            LQ+  A  M  + SK  + H ++ + N +LDE    K+A FG A
Sbjct: 134 GLQV--AKGMKYLASKKFV-HRDLAARNCMLDEKFTVKVADFGLA 175

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 70  AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++      K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
           SFG   +G     GD AV + L V A   ++  A + ++    +L+ + H+NI+  +GY 
Sbjct: 24  SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 77
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
             PQ       +V ++ +  SL  +L       + +K + IA Q  +A  M  +++K  I
Sbjct: 78  TKPQ-----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--TARGMDYLHAKS-I 129
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
            H ++ S+NI L E    K+  FG A   S  S     E+ S
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
           SFG   +G     GD AV + L V A   ++  A + ++    +L+ + H+NI+  +GY 
Sbjct: 36  SFGTVYKGKW--HGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 89
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
             PQ       +V ++ +  SL  +L       + +K + IA Q  +A  M  +++K  I
Sbjct: 90  TAPQ-----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--TARGMDYLHAKS-I 141
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
            H ++ S+NI L E    K+  FG A   S  S     E+ S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGY- 125
           SFG   +G     GD AV + L V A   ++  A + ++    +L+ + H+NI+  +GY 
Sbjct: 36  SFGTVYKGK--WHGDVAV-KMLNVTAPTPQQLQAFKNEVG---VLRKTRHVNILLFMGYS 89
Query: 126 --PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
             PQ       +V ++ +  SL  +L       + +K + IA Q  +A  M  +++K  I
Sbjct: 90  TKPQ-----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--TARGMDYLHAKS-I 141
Query: 184 YHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTS 225
            H ++ S+NI L E    K+  FG A   S  S     E+ S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 48  SVSIALVTLAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK--- 104
           SV +   T  +LKR + LK  G   +G+     D  + RN+ +   K  R   +QT    
Sbjct: 12  SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI--KKLSRPFQNQTHAKR 69
Query: 105 -LEEEILLKSSSHLNIVTLLGY--PQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDW 158
              E +L+K  +H NI++LL    PQ  L   Q   LV E M     +    E    LD 
Sbjct: 70  AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 125
Query: 159 EKRLAIALQIDSANQMVC---MYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           E R++  L      QM+C         I H ++   NI++      K+  FG A
Sbjct: 126 E-RMSYLLY-----QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	304
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-20
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-19
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-19
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-19
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-19
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-19
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-18
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-17
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-17
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-17
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-17
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-16
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-16
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-15
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	7e-15
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-14
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-12
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-12
3pls_A	298	Macrophage-stimulating protein receptor; protein k	7e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-12
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-11
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-11
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-11
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-11
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-11
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-11
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-11
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-11
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	9e-11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	9e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-10
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-10
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-10
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	9e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-09
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-09
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-09
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	7e-09
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-08
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-08
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-08
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-08
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-08
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-08
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-07
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-06
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 88.0 bits (219), Expect = 3e-20
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 24/134 (17%)

Query: 89  TVVAVKARRYMASQTKLE--EEILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
             VA+K R   +SQ   E   EI   S   H ++V+L+G+  +  +   L++++M+ G+L
Sbjct: 64  AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM-ILIYKYMENGNL 122

Query: 146 RWNLREKGG---PLDWEKRLAIALQIDSANQMVCMYSK-------PPIYHGNITSDNILL 195
           + +L         + WE+RL I   I +A        +         I H ++ S NILL
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEIC--IGAA--------RGLHYLHTRAIIHRDVKSINILL 172

Query: 196 DELCNAKLAGFGAA 209
           DE    K+  FG +
Sbjct: 173 DENFVPKITDFGIS 186

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 85.3 bits (212), Expect = 3e-19
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 16/132 (12%)

Query: 89  TVVAVKARRYMASQTKLEE---EILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           T+VAVK  +   +Q    +   E+ + S   H N++ L G+       R LV+ +M  GS
Sbjct: 55  TLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-TERLLVYPYMANGS 113

Query: 145 LRWNLREKGG---PLDWEKRLAIALQIDSANQMVCMY----SKPPIYHGNITSDNILLDE 197
           +   LRE+     PLDW KR  IAL   SA  +   Y      P I H ++ + NILLDE
Sbjct: 114 VASCLRERPESQPPLDWPKRQRIAL--GSARGLA--YLHDHCDPKIIHRDVKAANILLDE 169

Query: 198 LCNAKLAGFGAA 209
              A +  FG A
Sbjct: 170 EFEAVVGDFGLA 181

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 84.7 bits (210), Expect = 4e-19
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 21/137 (15%)

Query: 89  TVVAVKARRYMASQTKLEE---------EI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFE 138
           +VVA+K+     S+ + E          E+ ++ + +H NIV L G   +      +V E
Sbjct: 45  SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP---RMVME 101

Query: 139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS-KPPIYHGNITSDNILLDE 197
           F+  G L   L +K  P+ W  +L + L I  A  +  M +  PPI H ++ S NI L  
Sbjct: 102 FVPCGDLYHRLLDKAHPIKWSVKLRLMLDI--ALGIEYMQNQNPPIVHRDLRSPNIFLQS 159

Query: 198 L-----CNAKLAGFGAA 209
           L       AK+A FG +
Sbjct: 160 LDENAPVCAKVADFGLS 176

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 84.5 bits (210), Expect = 4e-19
 Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 13/130 (10%)

Query: 89  TVVAVK---ARRYMASQTKLEE---EILLKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQ 141
           T VAVK   A   + ++   ++   EI + +   H N+V LLG+  DG    CLV+ +M 
Sbjct: 55  TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMP 113

Query: 142 RGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC 199
            GSL   L    G  PL W  R  IA    +AN +  ++    I H +I S NILLDE  
Sbjct: 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQ--GAANGINFLHENHHI-HRDIKSANILLDEAF 170

Query: 200 NAKLAGFGAA 209
            AK++ FG A
Sbjct: 171 TAKISDFGLA 180

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 84.3 bits (209), Expect = 6e-19
 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 11/129 (8%)

Query: 89  TVVAVKARRYMASQTKLEEE-----ILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
           + VAVK         +   E      ++K   H NIV  +G          +V E++ RG
Sbjct: 61  SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP-PNLSIVTEYLSRG 119

Query: 144 SLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYS-KPPIYHGNITSDNILLDELCN 200
           SL   L + G    LD  +RL++A  +  A  M  +++  PPI H N+ S N+L+D+   
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDV--AKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT 177

Query: 201 AKLAGFGAA 209
            K+  FG +
Sbjct: 178 VKVCDFGLS 186

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 83.4 bits (207), Expect = 6e-19
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 10/129 (7%)

Query: 89  TVVAVKARRYMASQTKLEEEI-----LLKSSSHLNIVTLLGYPQDGLQRR-CLVFEFMQR 142
             + VK  +     T+   +       L+  SH N++ +LG  Q        L+  +M  
Sbjct: 34  NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93

Query: 143 GSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYS-KPPIYHGNITSDNILLDELCN 200
           GSL   L E     +D  + +  AL +  A  M  +++ +P I    + S ++++DE   
Sbjct: 94  GSLYNVLHEGTNFVVDQSQAVKFALDM--ARGMAFLHTLEPLIPRHALNSRSVMIDEDMT 151

Query: 201 AKLAGFGAA 209
           A+++     
Sbjct: 152 ARISMADVK 160

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 82.5 bits (204), Expect = 3e-18
 Identities = 37/140 (26%), Positives = 53/140 (37%), Gaps = 15/140 (10%)

Query: 82  RAVSRNLTVVAVKARRYMASQTKL-EEEI-LLKSSSHLNIVTLLGY---PQDGLQRRCLV 136
           +A   N   VAVK       Q+   E E+  L    H NI+  +G             L+
Sbjct: 42  KAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100

Query: 137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQI-------DSANQMVCMYSKPPIYHGNIT 189
             F ++GSL   L+     + W +   IA  +             +    KP I H +I 
Sbjct: 101 TAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158

Query: 190 SDNILLDELCNAKLAGFGAA 209
           S N+LL     A +A FG A
Sbjct: 159 SKNVLLKNNLTACIADFGLA 178

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 81.3 bits (201), Expect = 9e-18
 Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 20/157 (12%)

Query: 89  TVVAVK--ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGY---PQDGLQRRCLVFEFMQR 142
             VAVK       AS  + E EI       H NI+  +           +  L+ ++ + 
Sbjct: 61  EKVAVKVFFTTEEASWFR-ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHEN 119

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSA-----NQMVCMYSKPPIYHGNITSDNILLDE 197
           GSL   L+     LD +  L +A    S       ++     KP I H ++ S NIL+ +
Sbjct: 120 GSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177

Query: 198 LCNAKLAGFGAANYCSGGSNRRNCEKTSE------MA 228
                +A  G A      +N  +    +       M 
Sbjct: 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 81.0 bits (200), Expect = 1e-17
 Identities = 33/152 (21%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 89  TVVAVK--ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGY----PQDGLQRRCLVFEFMQ 141
             VAVK  +     +    E+ I  +    H NI   +        DG     LV E+  
Sbjct: 37  RPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP 95

Query: 142 RGSLRWNLREKGGPLDWEKRLAIALQIDS------ANQMVCMYSKPPIYHGNITSDNILL 195
            GSL   L       DW     +A  +               + KP I H ++ S N+L+
Sbjct: 96  NGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV 153

Query: 196 DELCNAKLAGFGAANYCSGGSNRRNCEKTSEM 227
                  ++ FG +   +G    R  E+ +  
Sbjct: 154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 80.6 bits (199), Expect = 2e-17
 Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 20/157 (12%)

Query: 89  TVVAVK--ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGY---PQDGLQRRCLVFEFMQR 142
             VAVK  + R   S  + E EI       H NI+  +           +  LV ++ + 
Sbjct: 66  EEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 124

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSA-----NQMVCMYSKPPIYHGNITSDNILLDE 197
           GSL   L      +  E  + +AL   S       ++V    KP I H ++ S NIL+ +
Sbjct: 125 GSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 182

Query: 198 LCNAKLAGFGAANYCSGGSNRRNCEKTSE------MA 228
                +A  G A      ++  +            MA
Sbjct: 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 78.9 bits (195), Expect = 5e-17
 Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 20/157 (12%)

Query: 89  TVVAVK--ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGY---PQDGLQRRCLVFEFMQR 142
             VAVK  + R   S  + E E+       H NI+  +      +    +  L+  + + 
Sbjct: 32  ENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSA-----NQMVCMYSKPPIYHGNITSDNILLDE 197
           GSL   L+     LD    L I L I S       ++     KP I H ++ S NIL+ +
Sbjct: 91  GSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK 148

Query: 198 LCNAKLAGFGAANYCSGGSNRRNCEKTSE------MA 228
                +A  G A   S  +N+ +            MA
Sbjct: 149 NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 78.5 bits (194), Expect = 6e-17
 Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 22/145 (15%)

Query: 89  TVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
             VA+K     + +     E+  L   +H NIV L G   + +   CLV E+ + GSL  
Sbjct: 32  KDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPV---CLVMEYAEGGSLYN 88

Query: 148 NLREKGGP--LDWEKRLAIALQIDSANQMVCMYSKPP--IYHGNITSDNILLDE-LCNAK 202
            L              ++  LQ   +  +  ++S  P  + H ++   N+LL       K
Sbjct: 89  VLHGAEPLPYYTAAHAMSWCLQC--SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 146

Query: 203 LAGFGAANYCSGGSNRRNCEKTSEM 227
           +  FG A           C+  + M
Sbjct: 147 ICDFGTA-----------CDIQTHM 160

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 77.4 bits (191), Expect = 2e-16
 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 7/123 (5%)

Query: 90  VVAVKARRYMASQTK---LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
           V+ +K       +T+   L+E  +++   H N++  +G      +R   + E+++ G+LR
Sbjct: 37  VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-KRLNFITEYIKGGTLR 95

Query: 147 WNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
             ++       W +R++ A  I  A+ M  ++S   I H ++ S N L+ E  N  +A F
Sbjct: 96  GIIKSMDSQYPWSQRVSFAKDI--ASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADF 152

Query: 207 GAA 209
           G A
Sbjct: 153 GLA 155

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 76.6 bits (189), Expect = 3e-16
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 10/124 (8%)

Query: 91  VAVKA-RRYMASQTKLEE---EI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
           VA++       ++ +L+    E+   + + H N+V  +G          ++    +  +L
Sbjct: 58  VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-PHLAIITSLCKGRTL 116

Query: 146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
              +R+    LD  K   IA +I     M  +++K  I H ++ S N+  D      +  
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEI--VKGMGYLHAK-GILHKDLKSKNVFYDNG-KVVITD 172

Query: 206 FGAA 209
           FG  
Sbjct: 173 FGLF 176

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 75.4 bits (186), Expect = 5e-16
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 16/127 (12%)

Query: 91  VAVKARRYMASQTKLEEE-----ILLKSSSHLNIVTLLGY---PQDGLQRRCLVFEFMQR 142
           VAVK     A   +  +       +L+ + H+NI+  +GY   PQ       +V ++ + 
Sbjct: 49  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-----LAIVTQWCEG 103

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
            SL  +L       + +K + IA Q   A  M  +++K  I H ++ S+NI L E    K
Sbjct: 104 SSLYHHLHASETKFEMKKLIDIARQT--ARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVK 160

Query: 203 LAGFGAA 209
           +  FG A
Sbjct: 161 IGDFGLA 167

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 89  TVVAVKARRYMASQTK-------LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ 141
             VAVKA R+   +          +E  L     H NI+ L G         CLV EF +
Sbjct: 31  DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-PNLCLVMEFAR 89

Query: 142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSK--PPIYHGNITSDNILLDELC 199
            G L   L  K   +  +  +  A+QI  A  M  ++ +   PI H ++ S NIL+ +  
Sbjct: 90  GGPLNRVLSGK--RIPPDILVNWAVQI--ARGMNYLHDEAIVPIIHRDLKSSNILILQKV 145

Query: 200 --------NAKLAGFGAA 209
                     K+  FG A
Sbjct: 146 ENGDLSNKILKITDFGLA 163

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 70.8 bits (174), Expect = 3e-14
 Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 19/151 (12%)

Query: 91  VAVK----ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQ-RRCLVF--EFMQR 142
           VA       +   + + + +EE  +LK   H NIV      +  ++ ++C+V   E M  
Sbjct: 54  VAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS 113

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY---SKPPIYHGNITSDNILLDELC 199
           G+L+    ++   +  +   +   QI    Q    +     PPI H ++  DNI +    
Sbjct: 114 GTLK-TYLKRFKVMKIKVLRSWCRQILKGLQ----FLHTRTPPIIHRDLKCDNIFITGPT 168

Query: 200 -NAKLAGFGAANYCSGGSNRRNCEKTSE-MA 228
            + K+   G A      S  +    T E MA
Sbjct: 169 GSVKIGDLGLAT-LKRASFAKAVIGTPEFMA 198

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 16/145 (11%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTL 122
           +FG+   G   ++ D       T+VAVK+ R           L+E  +LK  SH NIV L
Sbjct: 126 NFGEVFSGR--LRADN------TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           +G      Q   +V E +Q G     LR +G  L  +  L +      A  M  + SK  
Sbjct: 178 IGVCTQK-QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA--AAGMEYLESKCC 234

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           I H ++ + N L+ E    K++ FG
Sbjct: 235 I-HRDLAARNCLVTEKNVLKISDFG 258

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 12/145 (8%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTL 122
            FG    G  L    +         AVK+   +    +    L E I++K  SH N+++L
Sbjct: 37  HFGCVYHGTLLDNDGKK-----IHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           LG          +V  +M+ G LR  +R +      +  +   LQ+  A  M  + SK  
Sbjct: 92  LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYLASKKF 149

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + N +LDE    K+A FG
Sbjct: 150 V-HRDLAARNCMLDEKFTVKVADFG 173

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 63.8 bits (156), Expect = 7e-12
 Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTL 122
            FG    G  + +            A+K+   +    +    L E +L++  +H N++ L
Sbjct: 33  HFGVVYHGEYIDQAQNR-----IQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           +G          ++  +M  G L   +R        +  ++  LQ+  A  M  +  +  
Sbjct: 88  IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQV--ARGMEYLAEQKF 145

Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
           + H ++ + N +LDE    K+A FG A
Sbjct: 146 V-HRDLAARNCMLDESFTVKVADFGLA 171

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 63.5 bits (155), Expect = 8e-12
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 12/145 (8%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
           FG         +GD         VAVK+ +  +         +E  +L++  H NIV   
Sbjct: 34  FGKVELCRYDPEGDN----TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYK 89

Query: 124 GY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           G   +DG     L+ EF+  GSL+  L +    ++ +++L  A+QI     M  + S+  
Sbjct: 90  GICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI--CKGMDYLGSRQY 147

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + N+L++     K+  FG
Sbjct: 148 V-HRDLAARNVLVESEHQVKIGDFG 171

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 15/144 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGY 125
           FG    G           R    VA+K  +   M+    +EE  ++ + SH  +V L G 
Sbjct: 37  FGVVKYGKW---------RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87

Query: 126 PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYH 185
                +   ++ E+M  G L   LRE       ++ L +   +     M  + SK  + H
Sbjct: 88  CTKQ-RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV--CEAMEYLESKQFL-H 143

Query: 186 GNITSDNILLDELCNAKLAGFGAA 209
            ++ + N L+++    K++ FG +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLS 167

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 15/144 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGY 125
           FG    G            N   VA+K  R   M+ +  +EE  ++   SH  +V L G 
Sbjct: 21  FGLVHLGYW---------LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71

Query: 126 PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYH 185
             +     CLV EFM+ G L   LR + G    E  L + L +     M  +     I H
Sbjct: 72  CLEQ-APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG--MAYLEEACVI-H 127

Query: 186 GNITSDNILLDELCNAKLAGFGAA 209
            ++ + N L+ E    K++ FG  
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMT 151

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 62.2 bits (152), Expect = 2e-11
 Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 15/143 (10%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLG 124
            FG    G           +    VAVK  +   M+     +E   +   SH  +V   G
Sbjct: 20  QFGVVKLGKW---------KGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70

Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIY 184
                     +V E++  G L   LR  G  L+  + L +   +     M  + S   I 
Sbjct: 71  VCSKE-YPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDV--CEGMAFLESHQFI- 126

Query: 185 HGNITSDNILLDELCNAKLAGFG 207
           H ++ + N L+D     K++ FG
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFG 149

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 12/145 (8%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTL 122
            FG    G  L    +         AVK+   +    +    L E I++K  SH N+++L
Sbjct: 101 HFGCVYHGTLLDNDGKK-----IHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           LG          +V  +M+ G LR  +R +      +  +   LQ+  A  M  + SK  
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKFLASKKF 213

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + N +LDE    K+A FG
Sbjct: 214 V-HRDLAARNCMLDEKFTVKVADFG 237

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 42/144 (29%), Positives = 60/144 (41%), Gaps = 11/144 (7%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRY--MASQTKLEEEI-LLKSSSHLNIVTLLG 124
           FG           D        VVAVK  ++         E EI +LKS  H NIV   G
Sbjct: 54  FGSVEMCRYDPLQDNTG----EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 109

Query: 125 Y-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
                G +   L+ E++  GSLR  L++    +D  K L    QI     M  + +K  I
Sbjct: 110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI--CKGMEYLGTKRYI 167

Query: 184 YHGNITSDNILLDELCNAKLAGFG 207
            H ++ + NIL++     K+  FG
Sbjct: 168 -HRDLATRNILVENENRVKIGDFG 190

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 16/152 (10%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK---LEEEILLKSSSHLNIVTLL 123
           +F    +G    +       + T V +K              E   ++   SH ++V   
Sbjct: 20  TFTKIFKG-VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNY 78

Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
           G    G     LV EF++ GSL   L++    ++   +L +A Q+  A  M  +     I
Sbjct: 79  GVCVCG-DENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL--AAAMHFLEENTLI 135

Query: 184 YHGNITSDNILLDELCN--------AKLAGFG 207
            HGN+ + NILL    +         KL+  G
Sbjct: 136 -HGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTL 122
             G+   G   + G R V      VA+KA +  Y   Q +  L E  ++    H NI+ L
Sbjct: 61  DSGEVCYGRLRVPGQRDVP-----VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
            G    G +   +V E+M+ GSL   LR   G     + + +   + +   M  +     
Sbjct: 116 EGVVTRG-RLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG--MRYLSDLGY 172

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + N+L+D     K++ FG
Sbjct: 173 V-HRDLAARNVLVDSNLVCKVSDFG 196

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 8/131 (6%)

Query: 82  RAVSRNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
            A     T VAVK  +   M+ +  L E  ++K+  H  +V L        +   ++ EF
Sbjct: 206 MATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEF 263

Query: 140 MQRGSLRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
           M +GSL   L+  +G      K +  + QI  A  M  +  +  I H ++ + NIL+   
Sbjct: 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIEQRNYI-HRDLRAANILVSAS 320

Query: 199 CNAKLAGFGAA 209
              K+A FG A
Sbjct: 321 LVCKIADFGLA 331

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 42/144 (29%), Positives = 60/144 (41%), Gaps = 11/144 (7%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRY--MASQTKLEEEI-LLKSSSHLNIVTLLG 124
           FG           D        VVAVK  ++         E EI +LKS  H NIV   G
Sbjct: 23  FGSVEMCRYDPLQDN----TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78

Query: 125 Y-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
                G +   L+ E++  GSLR  L++    +D  K L    QI     M  + +K  I
Sbjct: 79  VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI--CKGMEYLGTKRYI 136

Query: 184 YHGNITSDNILLDELCNAKLAGFG 207
            H ++ + NIL++     K+  FG
Sbjct: 137 -HRDLATRNILVENENRVKIGDFG 159

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 11/145 (7%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK---LEEEILLKSSSHLNIVTLL 123
           +FG          GD        +VAVK  ++     +     E  +LK+     IV   
Sbjct: 35  NFGSVELCRYDPLGDN----TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90

Query: 124 GY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           G     G Q   LV E++  G LR  L+     LD  + L  + QI     M  + S+  
Sbjct: 91  GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI--CKGMEYLGSRRC 148

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + NIL++   + K+A FG
Sbjct: 149 V-HRDLAARNILVESEAHVKIADFG 172

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 61.2 bits (149), Expect = 8e-11
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 15/144 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK-LEEEILLKSSSHLNIVTLLGYP 126
           FGD + G    +G          VAVK  +  A+    L E  ++    H N+V LLG  
Sbjct: 206 FGDVMLGD--YRG--------NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255

Query: 127 QDGLQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYH 185
            +      +V E+M +GSL   LR +G   L  +  L  +L +     M  +     + H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV--CEAMEYLEGNNFV-H 312

Query: 186 GNITSDNILLDELCNAKLAGFGAA 209
            ++ + N+L+ E   AK++ FG  
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLT 336

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 60.8 bits (148), Expect = 9e-11
 Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 13/145 (8%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTL 122
            FG+   G   +   + +S     VA+K  +  Y   Q +  L E  ++    H NI+ L
Sbjct: 57  EFGEVCSGRLKLPSKKEIS-----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
            G      +   +V E+M+ GSL   LR+        + + +   I S   M  +     
Sbjct: 112 EGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG--MKYLSDMGY 168

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + NIL++     K++ FG
Sbjct: 169 V-HRDLAARNILINSNLVCKVSDFG 192

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 60.8 bits (148), Expect = 9e-11
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 14/146 (9%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVT 121
            FG+  +G L    G + V      VA+K  +  Y   Q    L E  ++   SH NI+ 
Sbjct: 56  EFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKP 181
           L G      +   ++ E+M+ G+L   LREK G     + + +   I +   M  + +  
Sbjct: 111 LEGVISKY-KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG--MKYLANMN 167

Query: 182 PIYHGNITSDNILLDELCNAKLAGFG 207
            + H ++ + NIL++     K++ FG
Sbjct: 168 YV-HRDLAARNILVNSNLVCKVSDFG 192

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 86  RNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
              T VA+K  +   M+ +  L+E  ++K   H  +V L     +  +   +V E+M +G
Sbjct: 206 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKG 263

Query: 144 SLRWNLREKGGP-LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           SL   L+ + G  L   + + +A QI  A+ M  +     + H ++ + NIL+ E    K
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVERMNYV-HRDLRAANILVGENLVCK 320

Query: 203 LAGFG 207
           +A FG
Sbjct: 321 VADFG 325

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 25/163 (15%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNIVT 121
           +FG  V     I  D+     +T VAVK  +  A++  L +     E++     H NI+ 
Sbjct: 81  AFGQVVLA-EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 139

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIAL 166
           LLG          ++ E+  +G+LR  L+ +                  L  +  ++ A 
Sbjct: 140 LLGACTQD-GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY 198

Query: 167 QIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           Q+  A  M  + SK  I H ++ + N+L+ E    K+A FG A
Sbjct: 199 QV--ARGMEYLASKKCI-HRDLAARNVLVTEDNVMKIADFGLA 238

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 33/156 (21%), Positives = 54/156 (34%), Gaps = 23/156 (14%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK-----LEEEILLKSSSHLNIVT 121
            FG   E     +           VAVK  +     +      L E   +K   H ++  
Sbjct: 35  EFGSVREAQLKQEDGSF-----VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89

Query: 122 LLG-----YPQDGLQRRCLVFEFMQRGSLRWNLR-----EKGGPLDWEKRLAIALQIDSA 171
           L+G       +  L    ++  FM+ G L   L      E    L  +  +   + I  A
Sbjct: 90  LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI--A 147

Query: 172 NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
             M  + S+  I H ++ + N +L E     +A FG
Sbjct: 148 CGMEYLSSRNFI-HRDLAARNCMLAEDMTVCVADFG 182

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 60.7 bits (147), Expect = 1e-10
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 82  RAVSRNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
                  T VA+K  +   M+ +  L+E  ++K   H  +V L     +  +   +V E+
Sbjct: 285 MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEY 342

Query: 140 MQRGSLRWNLREKGGP-LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
           M +GSL   L+ + G  L   + + +A QI  A+ M  +     + H ++ + NIL+ E 
Sbjct: 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVERMNYV-HRDLRAANILVGEN 399

Query: 199 CNAKLAGFG 207
              K+A FG
Sbjct: 400 LVCKVADFG 408

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 42/159 (26%), Positives = 61/159 (38%), Gaps = 21/159 (13%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNIVT 121
           +FG  VE              +  VAVK  +  A   + E      +I+     H NIV 
Sbjct: 58  AFGKVVEATAF---GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVN 114

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCM---- 177
           LLG    G     ++ E+   G L   LR K   L+ +   AIA    S   ++      
Sbjct: 115 LLGACTHG-GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173

Query: 178 -----Y--SKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
                +  SK  I H ++ + N+LL     AK+  FG A
Sbjct: 174 AQGMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLA 211

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 60.3 bits (147), Expect = 1e-10
 Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 15/145 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTLL 123
           FG   +GL + +G++        VA+K  R        K  L+E  ++ S  + ++  LL
Sbjct: 28  FGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83

Query: 124 GY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           G      +Q   L+ + M  G L   +RE    +  +  L   +QI  A  M  +  +  
Sbjct: 84  GICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI--AKGMNYLEDRRL 138

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + N+L+    + K+  FG
Sbjct: 139 V-HRDLAARNVLVKTPQHVKITDFG 162

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 25/150 (16%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLG- 124
           +G+  EG+   K           VAVK  +   M  +  L+E  ++K   H N+V LLG 
Sbjct: 233 YGEVYEGV--WKKYS------LTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284

Query: 125 ----YPQDGLQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYS 179
                P        ++ EFM  G+L   LRE     +     L +A QI  ++ M  +  
Sbjct: 285 CTREPPF------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI--SSAMEYLEK 336

Query: 180 KPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           K  I H N+ + N L+ E    K+A FG +
Sbjct: 337 KNFI-HRNLAARNCLVGENHLVKVADFGLS 365

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 15/144 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK-LEEEILLKSSSHLNIVTLLGYP 126
           FGD + G    +G          VAVK  +  A+    L E  ++    H N+V LLG  
Sbjct: 34  FGDVMLGD--YRG--------NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83

Query: 127 QDGLQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYH 185
            +      +V E+M +GSL   LR +G   L  +  L  +L +     M  +     + H
Sbjct: 84  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV--CEAMEYLEGNNFV-H 140

Query: 186 GNITSDNILLDELCNAKLAGFGAA 209
            ++ + N+L+ E   AK++ FG  
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLT 164

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 59.2 bits (144), Expect = 3e-10
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 25/161 (15%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNIVT 121
           +FG  V     +  D+   +    VAVK  +  A++  L +     E++     H NI+ 
Sbjct: 47  AFGQVVMA-EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIAL 166
           LLG          ++ E+  +G+LR  LR +                  + ++  ++   
Sbjct: 106 LLGACTQD-GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 164

Query: 167 QIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
           Q+  A  M  + S+  I H ++ + N+L+ E    K+A FG
Sbjct: 165 QL--ARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFG 202

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 14/145 (9%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTL 122
            FGD  +G+ +   + A++     VA+K  +     S  +  L+E + ++   H +IV L
Sbjct: 27  QFGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           +G   +      ++ E    G LR  L+ +   LD    +  A Q+  +  +  + SK  
Sbjct: 82  IGVITE--NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL--STALAYLESKRF 137

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H +I + N+L+      KL  FG
Sbjct: 138 V-HRDIAARNVLVSSNDCVKLGDFG 161

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 25/161 (15%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNIVT 121
            FG  V     +  D+   +    VAVK  +  A++  L +     E++     H NI+ 
Sbjct: 93  CFGQVVMA-EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 151

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIAL 166
           LLG          ++ E+  +G+LR  LR +                  + ++  ++   
Sbjct: 152 LLGACTQD-GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 210

Query: 167 QIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
           Q+  A  M  + S+  I H ++ + N+L+ E    K+A FG
Sbjct: 211 QL--ARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFG 248

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 58.0 bits (141), Expect = 6e-10
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 19/147 (12%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLG 124
            FG+   G              T VAVK+ +   M+    L E  L+K   H  +V L  
Sbjct: 25  QFGEVWMGYY---------NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75

Query: 125 Y-PQDGLQRRCLVFEFMQRGSLRWNLREKGGP-LDWEKRLAIALQIDSANQMVCMYSKPP 182
              Q+ +    ++ E+M+ GSL   L+   G  L   K L +A QI  A  M  +  +  
Sbjct: 76  VVTQEPI---YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERNY 130

Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
           I H ++ + NIL+ +  + K+A FG A
Sbjct: 131 I-HRDLRAANILVSDTLSCKIADFGLA 156

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 58.1 bits (141), Expect = 6e-10
 Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 22/155 (14%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVT 121
           SFG   EG    +  D       T VA+K     AS  +    L E  ++K  +  ++V 
Sbjct: 37  SFGMVYEGVAKGVVKDEPE----TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREK---------GGPLDWEKRLAIALQIDSAN 172
           LLG    G Q   ++ E M RG L+  LR             P    K + +A +I  A+
Sbjct: 93  LLGVVSQG-QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI--AD 149

Query: 173 QMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
            M  + +   + H ++ + N ++ E    K+  FG
Sbjct: 150 GMAYLNANKFV-HRDLAARNCMVAEDFTVKIGDFG 183

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 57.8 bits (140), Expect = 7e-10
 Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 11/138 (7%)

Query: 99  MASQTKLEEEI-LLKSSSHLNIVTLLGY---PQDGLQRRCLVFEFMQRGSLRWNL---RE 151
              + + + E  + +  +H NI+ L+ Y    +       L+  F +RG+L   +   ++
Sbjct: 67  QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD 126

Query: 152 KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG-AAN 210
           KG  L  ++ L + L I     +  +++     H ++   NILL +     L   G    
Sbjct: 127 KGNFLTEDQILWLLLGICRG--LEAIHA-KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183

Query: 211 YCSGGSNRRNCEKTSEMA 228
            C      R      + A
Sbjct: 184 ACIHVEGSRQALTLQDWA 201

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 57.7 bits (140), Expect = 9e-10
 Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 15/145 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTLL 123
           FG   +GL + +G++        VA+K  R        K  L+E  ++ S  + ++  LL
Sbjct: 28  FGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83

Query: 124 GY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           G      +Q   L+ + M  G L   +RE    +  +  L   +QI  A  M  +  +  
Sbjct: 84  GICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI--AKGMNYLEDRRL 138

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + N+L+    + K+  FG
Sbjct: 139 V-HRDLAARNVLVKTPQHVKITDFG 162

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 15/144 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
           FG   +G       + +      VA+K  +    +      + E  ++    +  IV L+
Sbjct: 349 FGSVRQG-VYRMRKKQID-----VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402

Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
           G  Q   +   LV E    G L   L  K   +       +  Q+  +  M  +  K  +
Sbjct: 403 GVCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV--SMGMKYLEEKNFV 458

Query: 184 YHGNITSDNILLDELCNAKLAGFG 207
            H N+ + N+LL     AK++ FG
Sbjct: 459 -HRNLAARNVLLVNRHYAKISDFG 481

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 45/163 (27%), Positives = 63/163 (38%), Gaps = 29/163 (17%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNIVT 121
           +FG  VE           S     VAVK  +  A  T+ E      ++L    +H+NIV 
Sbjct: 35  AFGKVVEATAY---GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 91

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREK-----------------GGPLDWEKRLAI 164
           LLG    G     ++ E+   G L   LR K                    LD E  L+ 
Sbjct: 92  LLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
           + Q+  A  M  + SK  I H ++ + NILL      K+  FG
Sbjct: 151 SYQV--AKGMAFLASKNCI-HRDLAARNILLTHGRITKICDFG 190

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTL 122
            FGD  +G+ +   + A++     VA+K  +   S +     L+E + ++   H +IV L
Sbjct: 402 QFGDVHQGIYMSPENPAMA-----VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           +G   +      ++ E    G LR  L+ +   LD    +  A Q+ +A  +  + SK  
Sbjct: 457 IGVITE--NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLESKRF 512

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H +I + N+L+      KL  FG
Sbjct: 513 V-HRDIAARNVLVSSNDCVKLGDFG 536

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 15/146 (10%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTKLEEEILLKSSSHLNIVTLLG 124
            +G+  EG+   K           VAVK  +   M  +  L+E  ++K   H N+V LLG
Sbjct: 25  QYGEVYEGV--WKKYS------LTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76

Query: 125 YPQDGLQRRCLVFEFMQRGSLRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
                     ++ EFM  G+L   LRE     +     L +A QI  ++ M  +  K  I
Sbjct: 77  VCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI--SSAMEYLEKKNFI 133

Query: 184 YHGNITSDNILLDELCNAKLAGFGAA 209
            H ++ + N L+ E    K+A FG +
Sbjct: 134 -HRDLAARNCLVGENHLVKVADFGLS 158

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 15/147 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
           FG   +G+ + +G+         V +K     + +       +  + + S  H +IV LL
Sbjct: 26  FGTVHKGVWIPEGESIK----IPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLL 81

Query: 124 GY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           G  P   LQ   LV +++  GSL  ++R+  G L  +  L   +QI  A  M  +     
Sbjct: 82  GLCPGSSLQ---LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--AKGMYYLEEHGM 136

Query: 183 IYHGNITSDNILLDELCNAKLAGFGAA 209
           + H N+ + N+LL      ++A FG A
Sbjct: 137 V-HRNLAARNVLLKSPSQVQVADFGVA 162

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 22/155 (14%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVT 121
           +FG+  EG ++ +  D +       VAVK    + S+      L E +++   +H NIV 
Sbjct: 83  AFGEVYEGQVSGMPNDPSP----LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLR------EKGGPLDWEKRLAIALQIDSANQMV 175
            +G        R ++ E M  G L+  LR       +   L     L +A  I  A    
Sbjct: 139 CIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI--ACGCQ 195

Query: 176 CMYSKPPIYHGNITSDNILLDELCN---AKLAGFG 207
            +     I H +I + N LL        AK+  FG
Sbjct: 196 YLEENHFI-HRDIAARNCLLTCPGPGRVAKIGDFG 229

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 36/139 (25%), Positives = 51/139 (36%), Gaps = 9/139 (6%)

Query: 106 EEEILLKSSSHLNIVTLLGYPQDGLQRR------CLVFEFMQRGSLRWNL--REKGGPLD 157
           E   + K S H NIV        G +         L+   + +G L   L   E  GPL 
Sbjct: 75  EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLS 134

Query: 158 WEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN 217
            +  L I  Q   A Q      KPPI H ++  +N+LL      KL  FG+A   S   +
Sbjct: 135 CDTVLKIFYQTCRAVQH-MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPD 193

Query: 218 RRNCEKTSEMAEDINDFVG 236
                +   + E+      
Sbjct: 194 YSWSAQRRALVEEEITRNT 212

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 28/164 (17%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNIV 120
           +FG  +E     I            VAVK  +  A+ ++        +IL+    HLN+V
Sbjct: 39  AFGQVIEADAFGIDKTATC----RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94

Query: 121 TLLGYPQDGLQRRCLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIA 165
            LLG          ++ EF + G+L   LR K                  L  E  +  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154

Query: 166 LQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
            Q+  A  M  + S+  I H ++ + NILL E    K+  FG A
Sbjct: 155 FQV--AKGMEFLASRKCI-HRDLAARNILLSEKNVVKICDFGLA 195

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 15/144 (10%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLL 123
           FG   +G+  ++  +        VA+K  +    +      + E  ++    +  IV L+
Sbjct: 23  FGSVRQGVYRMRKKQ------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76

Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPI 183
           G  Q   +   LV E    G L   L  K   +       +  Q+  +  M  +  K  +
Sbjct: 77  GVCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV--SMGMKYLEEKNFV 132

Query: 184 YHGNITSDNILLDELCNAKLAGFG 207
            H ++ + N+LL     AK++ FG
Sbjct: 133 -HRDLAARNVLLVNRHYAKISDFG 155

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 22/155 (14%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVT 121
           +FG+  EG ++ +  D +       VAVK    + S+      L E +++   +H NIV 
Sbjct: 42  AFGEVYEGQVSGMPNDPSP----LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLR------EKGGPLDWEKRLAIALQIDSANQMV 175
            +G        R ++ E M  G L+  LR       +   L     L +A  I  A    
Sbjct: 98  CIGVSLQS-LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI--ACGCQ 154

Query: 176 CMYSKPPIYHGNITSDNILLDELCN---AKLAGFG 207
            +     I H +I + N LL        AK+  FG
Sbjct: 155 YLEENHFI-HRDIAARNCLLTCPGPGRVAKIGDFG 188

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 39/169 (23%), Positives = 60/169 (35%), Gaps = 36/169 (21%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNIV 120
           +FG  +      I            VAVK  +  A  ++ E      +++ +  SH NIV
Sbjct: 57  AFGKVMNATAYGISKTGVS----IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112

Query: 121 TLLGYPQDGLQRRCLVFEFMQRGSLRWNLREK----------------------GGPLDW 158
            LLG          L+FE+   G L   LR K                         L +
Sbjct: 113 NLLGACTLS-GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171

Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
           E  L  A Q+  A  M  +  K  + H ++ + N+L+      K+  FG
Sbjct: 172 EDLLCFAYQV--AKGMEFLEFKSCV-HRDLAARNVLVTHGKVVKICDFG 217

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 55.1 bits (133), Expect = 7e-09
 Identities = 33/138 (23%), Positives = 48/138 (34%), Gaps = 14/138 (10%)

Query: 90  VVAVKA---RRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRR-CLVFEFMQRGS 144
           + A+K      ++        E  +LK  +H NIV L    ++   R   L+ EF   GS
Sbjct: 36  LFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGS 95

Query: 145 LRWNLREKGGPLDWEKRLAIAL--QIDSANQMVCMYSKPPIYHGNITSDNILL----DEL 198
           L   L E        +   + +   +     M  +     I H NI   NI+     D  
Sbjct: 96  LYTVLEEPSNAYGLPESEFLIVLRDVVGG--MNHLRENG-IVHRNIKPGNIMRVIGEDGQ 152

Query: 199 CNAKLAGFGAANYCSGGS 216
              KL  FGAA       
Sbjct: 153 SVYKLTDFGAARELEDDE 170

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 54.5 bits (132), Expect = 7e-09
 Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 14/145 (9%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK--LEEEILLKSSSHLNIVTL 122
            FG+  EG+        ++     VAVK  +        +  + E +++K+  H +IV L
Sbjct: 24  FFGEVYEGVYTNHKGEKIN-----VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           +G  ++  +   ++ E    G L   L      L     +  +LQI     M  + S   
Sbjct: 79  IGIIEE--EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI--CKAMAYLESINC 134

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H +I   NIL+      KL  FG
Sbjct: 135 V-HRDIAVRNILVASPECVKLGDFG 158

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 22/155 (14%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKA-RRYMASQTK----LEEEILLKSSSHLNIVT 121
            FG  +EG    +   +       VAVK  +   +SQ +    L E   +K  SH N++ 
Sbjct: 46  EFGSVMEGNLKQEDGTS-----LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100

Query: 122 LLG----YPQDGLQRRCLVFEFMQRGSLRWNLRE-----KGGPLDWEKRLAIALQIDSAN 172
           LLG        G+ +  ++  FM+ G L   L           +  +  L   + I  A 
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI--AL 158

Query: 173 QMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
            M  + ++  + H ++ + N +L +     +A FG
Sbjct: 159 GMEYLSNRNFL-HRDLAARNCMLRDDMTVCVADFG 192

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 30/161 (18%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEE-----EILLKSSSHLNIVT 121
           +FG  ++    IK D          A+K  +  AS+    +     E+L K   H NI+ 
Sbjct: 37  NFGQVLKAR--IKKDGLR----MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIAL 166
           LLG  +       L  E+   G+L   LR+                   L  ++ L  A 
Sbjct: 91  LLGACEHR-GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149

Query: 167 QIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
            +  A  M  +  K  I H ++ + NIL+ E   AK+A FG
Sbjct: 150 DV--ARGMDYLSQKQFI-HRDLAARNILVGENYVAKIADFG 187

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 14/146 (9%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTL 122
            FG           D        +VAVKA +  A         +E  +L++  H +I+  
Sbjct: 43  HFGKVSLYCYDPTNDGTG----EMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98

Query: 123 LGY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKP 181
            G     G     LV E++  GSLR  L      +   + L  A QI     M  ++++ 
Sbjct: 99  KGCCEDAGAASLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQI--CEGMAYLHAQH 154

Query: 182 PIYHGNITSDNILLDELCNAKLAGFG 207
            I H ++ + N+LLD     K+  FG
Sbjct: 155 YI-HRDLAARNVLLDNDRLVKIGDFG 179

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 33/137 (24%), Positives = 47/137 (34%), Gaps = 14/137 (10%)

Query: 91  VAVKA---RRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRR-CLVFEFMQRGSL 145
            A+K      ++        E  +LK  +H NIV L    ++   R   L+ EF   GSL
Sbjct: 37  FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL 96

Query: 146 RWNLREKGGPLDWEKRLAIAL--QIDSANQMVCMYSKPPIYHGNITSDNILL----DELC 199
              L E        +   + +   +     M  +     I H NI   NI+     D   
Sbjct: 97  YTVLEEPSNAYGLPESEFLIVLRDVVGG--MNHLRENG-IVHRNIKPGNIMRVIGEDGQS 153

Query: 200 NAKLAGFGAANYCSGGS 216
             KL  FGAA       
Sbjct: 154 VYKLTDFGAARELEDDE 170

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 36/169 (21%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVT 121
            FG  V+     +KG        T VAVK  +  AS ++    L E  +LK  +H +++ 
Sbjct: 35  EFGKVVKATAFHLKGRAGY----TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREK-----------------------GGPLDW 158
           L G          L+ E+ + GSLR  LRE                           L  
Sbjct: 91  LYGACSQD-GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149

Query: 159 EKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
              ++ A QI  +  M  +     + H ++ + NIL+ E    K++ FG
Sbjct: 150 GDLISFAWQI--SQGMQYLAEMKLV-HRDLAARNILVAEGRKMKISDFG 195

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 17/145 (11%)

Query: 68  FGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-----LKSSSHLNIVTL 122
           FG   +G   +K           VAVK  +  A+   L++E+L     ++   +  IV +
Sbjct: 30  FGTVKKGYYQMKKVV------KTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           +G  +   +   LV E  + G L   L+ +   +  +  + +  Q+  +  M  +     
Sbjct: 84  IGICEA--ESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQV--SMGMKYLEESNF 138

Query: 183 IYHGNITSDNILLDELCNAKLAGFG 207
           + H ++ + N+LL     AK++ FG
Sbjct: 139 V-HRDLAARNVLLVTQHYAKISDFG 162

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 20/158 (12%)

Query: 59  LKRRRMLKS--FGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMASQTK----LEEEIL 110
           L+    L    FG    G       + VS     VAVK  +   ++        + E   
Sbjct: 20  LRLLEKLGDGSFGVVRRGEWDAPSGKTVS-----VAVKCLKPDVLSQPEAMDDFIREVNA 74

Query: 111 LKSSSHLNIVTLLGY-PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQID 169
           + S  H N++ L G      ++   +V E    GSL   LR+  G          A+Q+ 
Sbjct: 75  MHSLDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV- 130

Query: 170 SANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
            A  M  + SK  I H ++ + N+LL      K+  FG
Sbjct: 131 -AEGMGYLESKRFI-HRDLAARNLLLATRDLVKIGDFG 166

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 28/165 (16%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEI-LLKSSSHLNIVTLL 123
           ++G    G  L             +A+K      S+    L EEI L K   H NIV  L
Sbjct: 34  TYGIVYAGRDLSNQV--------RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85

Query: 124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRL--AIALQIDSA-----NQMVC 176
           G   +      +  E +  GSL   LR K GPL   ++       QI        +    
Sbjct: 86  GSFSEN-GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-- 142

Query: 177 MYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANYCSGGSNRRN 220
                 I H +I  DN+L++      K++ FG +   +G +    
Sbjct: 143 ------IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 5e-08
 Identities = 54/328 (16%), Positives = 96/328 (29%), Gaps = 75/328 (22%)

Query: 27  GEQNYGCQFVITIVGSAAVA----RSVSIALVTLAILKRR---RMLKSFGDSVEGLTLI- 78
           GE  Y  + ++++   A V     + V       +IL +     ++ S  D+V G   + 
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNFDCKDVQDMP--KSILSKEEIDHIIMS-KDAVSGTLRLF 68

Query: 79  -----KGDRAVSRNLTVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR 133
                K +  V +   V  V    Y    + ++ E    S     +  +    +D L   
Sbjct: 69  WTLLSKQEEMVQK--FVEEVLRINYKFLMSPIKTEQRQPSM----MTRMYIEQRDRLYND 122

Query: 134 CLVFE--FMQRGSLRWNLREKGGPLDWEKRLAI-----------ALQIDSANQMVCMYSK 180
             VF    + R      LR+    L   K + I           AL +  + ++ C    
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182

Query: 181 PPIY---HGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAED-INDFVG 236
             I+     N  S   +L+ L    L      N+ S   +  N +      +  +     
Sbjct: 183 K-IFWLNLKNCNSPETVLEMLQK--LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-- 237

Query: 237 GQECLDQRLYIPNEKFKITSLAKLGDI-EKWCI-----SC--------CSNIE----GNE 278
               L  + Y  N       L  L ++           SC            +       
Sbjct: 238 ----LKSKPY-EN------CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286

Query: 279 NHPKIVDVLSGL--KQVKQLFSSVLSMK 304
            H  +      L   +VK L    L  +
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCR 314

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 52.2 bits (126), Expect = 6e-08
 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 20/142 (14%)

Query: 90  VVAVK-------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
            VA+K        +  M  + + E +I      H +I+ L  Y +D      LV E    
Sbjct: 38  EVAIKMIDKKAMYKAGMVQRVQNEVKIH-CQLKHPSILELYNYFEDS-NYVYLVLEMCHN 95

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVC----MYSKPPIYHGNITSDNILLDEL 198
           G +   L+ +  P   E      +      Q++     ++S   I H ++T  N+LL   
Sbjct: 96  GEMNRYLKNRVKPFS-ENEARHFMH-----QIITGMLYLHSHG-ILHRDLTLSNLLLTRN 148

Query: 199 CNAKLAGFGAANYCSGGSNRRN 220
            N K+A FG A        +  
Sbjct: 149 MNIKIADFGLATQLKMPHEKHY 170

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 13/125 (10%)

Query: 90  VVAVK-------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
           ++A+K        +  +  Q + E EI      H NI+ L GY  D   R  L+ E+   
Sbjct: 36  ILALKVLFKAQLEKAGVEHQLRREVEIQ-SHLRHPNILRLYGYFHDA-TRVYLILEYAPL 93

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G++   L+ K    D ++      ++ +A  +   +SK  + H +I  +N+LL      K
Sbjct: 94  GTVYRELQ-KLSKFDEQRTATYITELANA--LSYCHSKR-VIHRDIKPENLLLGSAGELK 149

Query: 203 LAGFG 207
           +A FG
Sbjct: 150 IADFG 154

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 22/137 (16%)

Query: 89  TVVAVKARRYMASQTK---LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
            +VAVKA +      +     E  LL +  H +IV   G   DG     +VFE+M+ G L
Sbjct: 46  MLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG-DPLIMVFEYMKHGDL 104

Query: 146 RWNLRE---------------KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITS 190
              LR                  G L   + L IA QI  A+ MV + S+  + H ++ +
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI--ASGMVYLASQHFV-HRDLAT 161

Query: 191 DNILLDELCNAKLAGFG 207
            N L+      K+  FG
Sbjct: 162 RNCLVGANLLVKIGDFG 178

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 15/138 (10%)

Query: 90  VVAVK-------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
           ++A+K        +  +  Q + E EI      H NI+ +  Y  D  +R  L+ EF  R
Sbjct: 41  IMALKVLFKSQLEKEGVEHQLRREIEIQ-SHLRHPNILRMYNYFHDR-KRIYLMLEFAPR 98

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G L   L++ G   +      +  ++  A  +   + +  + H +I  +N+L+      K
Sbjct: 99  GELYKELQKHGRFDEQRSATFME-ELADA--LHYCHERK-VIHRDIKPENLLMGYKGELK 154

Query: 203 LAGFGAANYCSGGSNRRN 220
           +A FG + +    S RR 
Sbjct: 155 IADFGWSVHAP--SLRRR 170

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 32/146 (21%), Positives = 51/146 (34%), Gaps = 22/146 (15%)

Query: 90  VVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
             AVK    +  +    EE+      S   IV L G  ++G     +  E ++ GSL   
Sbjct: 85  QCAVKK---VRLEVFRVEELVACAGLSSPRIVPLYGAVREG-PWVNIFMELLEGGSLG-Q 139

Query: 149 LREKGGPLDWEKRLA-IALQIDSA-----NQMVCMYSKPPIYHGNITSDNILLDEL-CNA 201
           L ++ G L  E R      Q          + +         HG++ +DN+LL      A
Sbjct: 140 LIKQMGCLP-EDRALYYLGQALEGLEYLHTRRIL--------HGDVKADNVLLSSDGSRA 190

Query: 202 KLAGFGAANYCSGGSNRRNCEKTSEM 227
            L  FG A         ++      +
Sbjct: 191 ALCDFGHALCLQPDGLGKSLLTGDYI 216

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 26/159 (16%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTK---LEEEILLKSSSHLNIVTL 122
           +FG         +  ++       +VAVKA +  +   +     E  LL    H +IV  
Sbjct: 53  AFGKVFLAECHNLLPEQDK----MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLRE--------------KGGPLDWEKRLAIALQI 168
            G   +G +   +VFE+M+ G L   LR                 GPL   + LA+A Q+
Sbjct: 109 FGVCTEG-RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167

Query: 169 DSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
             A  MV +     + H ++ + N L+ +    K+  FG
Sbjct: 168 --AAGMVYLAGLHFV-HRDLATRNCLVGQGLVVKIGDFG 203

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 90  VVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLG--YPQDGLQRRCLVFEFMQRGSLR 146
           +VA+K     +   ++ +EI  ++     ++V   G  +    L    +V E+   GS+ 
Sbjct: 56  IVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW---IVMEYCGAGSVS 112

Query: 147 WNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
             +R +   L  E  +A  LQ  +   +  ++    I H +I + NILL+   +AKLA F
Sbjct: 113 DIIRLRNKTLT-EDEIATILQ-STLKGLEYLHFMRKI-HRDIKAGNILLNTEGHAKLADF 169

Query: 207 GAANYCSGGSNRRN 220
           G A   +    +RN
Sbjct: 170 GVAGQLTDTMAKRN 183

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 51.2 bits (122), Expect = 2e-07
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 17/142 (11%)

Query: 89  TVVAVKA---RRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQD-----GLQRRCLVFEF 139
             VA+K         ++ +   EI ++K  +H N+V+    P             L  E+
Sbjct: 40  EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99

Query: 140 MQRGSLRWNLREKG--GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
            + G LR  L +      L       +   I SA  +  ++    I H ++  +NI+L  
Sbjct: 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA--LRYLHENR-IIHRDLKPENIVLQP 156

Query: 198 LCNA---KLAGFGAANYCSGGS 216
                  K+   G A     G 
Sbjct: 157 GPQRLIHKIIDLGYAKELDQGE 178

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 11/136 (8%)

Query: 90  VVAVKARRYMASQTKLEE---EIL-LKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQRGS 144
           + A K      S+ +LE+   EI  L +  H  IV LLG Y  DG  +  ++ EF   G+
Sbjct: 46  LAAAKVIE-TKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIEFCPGGA 102

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
           +   + E    L  E ++ +  +      +  ++SK  I H ++ + N+L+    + +LA
Sbjct: 103 VDAIMLELDRGLT-EPQIQVVCR-QMLEALNFLHSKRII-HRDLKAGNVLMTLEGDIRLA 159

Query: 205 GFGAANYCSGGSNRRN 220
            FG +        +R+
Sbjct: 160 DFGVSAKNLKTLQKRD 175

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 10/99 (10%)

Query: 67  SFGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVT 121
           +FG   +     +          T+VAVK  +  AS         E  L+    + NIV 
Sbjct: 59  AFGRVFQARAPGLLPYEPF----TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEK 160
           LLG    G +  CL+FE+M  G L   LR          
Sbjct: 115 LLGVCAVG-KPMCLLFEYMAYGDLNEFLRSMSPHTVCSL 152

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 11/147 (7%)

Query: 77  LIKGDRAVSRNLTVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCL 135
             K      R+ T          +     + E+ ++    +   +T  G   +      +
Sbjct: 62  YEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY-DEVYI 120

Query: 136 VFEFMQRGSLRWNLREKG-------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNI 188
           ++E+M+  S+                 +  +    I   + ++     ++++  I H ++
Sbjct: 121 IYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNS--FSYIHNEKNICHRDV 178

Query: 189 TSDNILLDELCNAKLAGFGAANYCSGG 215
              NIL+D+    KL+ FG + Y    
Sbjct: 179 KPSNILMDKNGRVKLSDFGESEYMVDK 205

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 11/136 (8%)

Query: 90  VVAVK--ARRYMAS---QTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
           V A K   +  +     + K+  EI + +S +H ++V   G+ +D      +V E  +R 
Sbjct: 68  VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-DFVFVVLELCRRR 126

Query: 144 SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
           SL    + +    + E R     QI        ++    + H ++   N+ L+E    K+
Sbjct: 127 SLLELHKRRKALTEPEAR-YYLRQIVLG--CQYLHRNR-VIHRDLKLGNLFLNEDLEVKI 182

Query: 204 AGFGAANYCSGGSNRR 219
             FG A        R+
Sbjct: 183 GDFGLATKVEYDGERK 198

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 30/162 (18%)

Query: 67  SFGDSVEGL--TLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIV 120
            FG   +G       G++        VA+K  +  A          E +L     H N+V
Sbjct: 21  RFGKVYKGHLFGPAPGEQT-----QAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75

Query: 121 TLLGYPQDGLQRRCLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIA 165
            LLG      Q   ++F +   G L   L  +                  L+    + + 
Sbjct: 76  CLLGVVTKD-QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134

Query: 166 LQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
            QI  A  M  + S   + H ++ + N+L+ +  N K++  G
Sbjct: 135 AQI--AAGMEYLSSHHVV-HKDLATRNVLVYDKLNVKISDLG 173

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 28/168 (16%), Positives = 53/168 (31%), Gaps = 29/168 (17%)

Query: 90  VVAVKA-RRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRR------------CL 135
             A+K  R      + +  E+ LL S +H  +V       +                  +
Sbjct: 33  YYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFI 92

Query: 136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSA-----NQMVCMYSKPPIYHGNITS 190
             E+ + G+L   +  +      ++   +  QI  A     +Q         I H ++  
Sbjct: 93  QMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG--------IIHRDLKP 144

Query: 191 DNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDI--NDFVG 236
            NI +DE  N K+  FG A       +    +  +           +G
Sbjct: 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 12/136 (8%)

Query: 90  VVAVKARRYMASQTKLEE---EI-LLKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQRGS 144
           VVA+K      ++ ++E+   EI +L       +    G Y +D   +  ++ E++  GS
Sbjct: 49  VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--TKLWIIMEYLGGGS 106

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
               L  + GPLD E ++A  L+ +    +  ++S+  I H +I + N+LL E    KLA
Sbjct: 107 ALDLL--EPGPLD-ETQIATILR-EILKGLDYLHSEKKI-HRDIKAANVLLSEHGEVKLA 161

Query: 205 GFGAANYCSGGSNRRN 220
            FG A   +    +RN
Sbjct: 162 DFGVAGQLTDTQIKRN 177

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 11/136 (8%)

Query: 90  VVAVK--ARRYMASQ---TKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
           V A K   +  +       K+  EI + +S +H ++V   G+ +D      +V E  +R 
Sbjct: 42  VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-DFVFVVLELCRRR 100

Query: 144 SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
           SL    + +    + E R     QI        ++    + H ++   N+ L+E    K+
Sbjct: 101 SLLELHKRRKALTEPEAR-YYLRQIVLG--CQYLHRNR-VIHRDLKLGNLFLNEDLEVKI 156

Query: 204 AGFGAANYCSGGSNRR 219
             FG A        R+
Sbjct: 157 GDFGLATKVEYDGERK 172

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 9/106 (8%)

Query: 110 LLKSSSHLNIVTLLGYPQD-GLQRRCLVFEFMQ-----RGSLRWNLREKGGPLDWEKRLA 163
           L+K      ++ +    +D  +  R  ++  MQ      G +  +       L    RL 
Sbjct: 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQ 210

Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
           + LQ+        ++    + H  +   +I+LD+     L GF   
Sbjct: 211 LTLQVIRLLAS--LHHYG-LVHTYLRPVDIVLDQRGGVFLTGFEHL 253

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 16/125 (12%), Positives = 27/125 (21%), Gaps = 11/125 (8%)

Query: 110 LLKSSSHLNIVTLL-GYPQDGLQRRCLVFEFMQR-----GSLRWNLREKGGPLDWEKRLA 163
            +   S      L  G     +    L+            S    +    G         
Sbjct: 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHI 198

Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEK 223
           +  Q+              + HG+ T DN+ +       L    A      G+       
Sbjct: 199 LTAQLIRL---AANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKV--GTRGPASSV 253

Query: 224 TSEMA 228
               A
Sbjct: 254 PVTYA 258

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 31/162 (19%)

Query: 89  TVVAVKARRYMASQTKLEE-----------EI-LLKSSSHLNIVTLLG-YPQDGLQRRCL 135
             V V+       +  LE            E+ + K  +H NIV     +  D      +
Sbjct: 53  EYVTVR-------RINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWV 103

Query: 136 VFEFMQRGSLRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
           V  FM  GS +  +       ++ E  +A  LQ      +  ++    + H ++ + +IL
Sbjct: 104 VTSFMAYGSAKDLICTHFMDGMN-ELAIAYILQ-GVLKALDYIHHMGYV-HRSVKASHIL 160

Query: 195 LDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVG 236
           +       L+G  +         R+       + +     V 
Sbjct: 161 ISVDGKVYLSGLRSNLSMISHGQRQRV-----VHDFPKYSVK 197

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 26/160 (16%)

Query: 90  VVAVKARRYMASQTKLEE---EI-LLKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQRGS 144
            VA+K       QT ++E   EI  +    H NIV+    +         LV + +  GS
Sbjct: 42  KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK--DELWLVMKLLSGGS 99

Query: 145 LR-------WNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE 197
           +             K G LD E  +A  L+ +    +  ++    I H ++ + NILL E
Sbjct: 100 VLDIIKHIVAKGEHKSGVLD-ESTIATILR-EVLEGLEYLHKNGQI-HRDVKAGNILLGE 156

Query: 198 LCNAKLAGFG-AANYCSGGSNRRNCEKTSEMAEDINDFVG 236
             + ++A FG +A   +GG   RN  +          FVG
Sbjct: 157 DGSVQIADFGVSAFLATGGDITRNKVR--------KTFVG 188

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 10/126 (7%)

Query: 90  VVAVKARRY--MASQTK---LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
              +K      M+S+ +     E  +L +  H NIV      ++      +V ++ + G 
Sbjct: 51  QYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN-GSLYIVMDYCEGGD 109

Query: 145 LRWNL-REKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
           L   +  +KG     ++ L   +QI  A  +  ++ +  I H +I S NI L +    +L
Sbjct: 110 LFKRINAQKGVLFQEDQILDWFVQICLA--LKHVHDRK-ILHRDIKSQNIFLTKDGTVQL 166

Query: 204 AGFGAA 209
             FG A
Sbjct: 167 GDFGIA 172

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 29/153 (18%), Positives = 42/153 (27%), Gaps = 26/153 (16%)

Query: 90  VVAVK--ARRYMASQTKL----EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
           + AVK     +   + +     E     K   H   V L    ++G     L  E     
Sbjct: 84  LYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG-GILYLQTELCG-P 141

Query: 144 SLRWNLREKGGPLDWEKRLA-IALQIDSA------NQMVCMYSKPPIYHGNITSDNILLD 196
           SL+ +    G  L  E ++         A        +V         H ++   NI L 
Sbjct: 142 SLQQHCEAWGASLP-EAQVWGYLRDTLLALAHLHSQGLV---------HLDVKPANIFLG 191

Query: 197 ELCNAKLAGFGAANYCSGGSNRRNCEKTSE-MA 228
                KL  FG              E     MA
Sbjct: 192 PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMA 224

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 14/143 (9%)

Query: 82  RAVSRNLTVVAVK--ARRYMASQT--KLEEEI-LLKSSSH--LNIVTLLGYPQDGLQRRC 134
           + ++    + A+K        +QT      EI  L         I+ L  Y     Q   
Sbjct: 27  QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-QYIY 85

Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
           +V E      L   L++K   +D  +R +    +  A  +  ++    I H ++   N L
Sbjct: 86  MVMECGN-IDLNSWLKKKK-SIDPWERKSYWKNMLEA--VHTIHQHG-IVHSDLKPANFL 140

Query: 195 LDELCNAKLAGFGAANYCSGGSN 217
           + +    KL  FG AN     + 
Sbjct: 141 IVD-GMLKLIDFGIANQMQPDTT 162

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 11/139 (7%)

Query: 90  VVAVKARRY--MASQTK---LEEEILLKSSSHLNIVTLLGYPQDGLQRR-CLVFEFMQRG 143
           ++  K   Y  M    K   + E  LL+   H NIV       D       +V E+ + G
Sbjct: 33  ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGG 92

Query: 144 SLR---WNLREKGGPLDWEKRLAIALQIDSANQMV--CMYSKPPIYHGNITSDNILLDEL 198
            L        ++   LD E  L +  Q+  A +           + H ++   N+ LD  
Sbjct: 93  DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152

Query: 199 CNAKLAGFGAANYCSGGSN 217
            N KL  FG A   +  ++
Sbjct: 153 QNVKLGDFGLARILNHDTS 171

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 106 EEEILLKSSSHLNIVTLLG-----YPQDGLQRRCLVFEFMQRGSLRWNLR-EKGGPLDWE 159
           E  +L K S H NI T  G      P     +  LV EF   GS+   ++  KG  L  E
Sbjct: 70  EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK-E 128

Query: 160 KRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRR 219
           + +A   + +    +  ++    I H +I   N+LL E    KL  FG +        RR
Sbjct: 129 EWIAYICR-EILRGLSHLHQHKVI-HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 186

Query: 220 N 220
           N
Sbjct: 187 N 187

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 17/138 (12%)

Query: 90  VVAVKARRYMASQTKLEE---EIL-LKSSSHLNIVTLLG-YPQDGLQRRCL--VFEFMQR 142
            VA++    +  Q K E    EIL ++ + + NIV  L  Y    L    L  V E++  
Sbjct: 47  EVAIRQMN-LQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDELWVVMEYLAG 101

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           GSL   + E    +D E ++A   + +    +  ++S   I H +I SDNILL    + K
Sbjct: 102 GSLTDVVTE--TCMD-EGQIAAVCR-ECLQALEFLHSNQVI-HRDIKSDNILLGMDGSVK 156

Query: 203 LAGFGAANYCSGGSNRRN 220
           L  FG     +   ++R+
Sbjct: 157 LTDFGFCAQITPEQSKRS 174

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 15/137 (10%)

Query: 90  VVAVKARRYMASQTKLEE---EIL-LKSSSHLNIVTLLG--YPQDGLQRRCLVFEFMQRG 143
            VAVK    +  Q + E    E++ ++   H N+V +       + L    ++ EF+Q G
Sbjct: 72  QVAVKMMD-LRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELW---VLMEFLQGG 127

Query: 144 SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
           +L   + +    L+ E+++A   +      +  ++++  I H +I SD+ILL      KL
Sbjct: 128 ALTDIVSQ--VRLN-EEQIATVCE-AVLQALAYLHAQGVI-HRDIKSDSILLTLDGRVKL 182

Query: 204 AGFGAANYCSGGSNRRN 220
           + FG     S    +R 
Sbjct: 183 SDFGFCAQISKDVPKRK 199

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 14/143 (9%)

Query: 82  RAVSRNLTVVAVK----ARRYMASQTKLEEEI-LLKSSSHLN--IVTLLGYPQDGLQRRC 134
           + ++    + A+K          +      EI  L      +  I+ L  Y     Q   
Sbjct: 46  QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-QYIY 104

Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
           +V E      L   L++K   +D  +R +    +  A  +  ++    I H ++   N L
Sbjct: 105 MVMECGN-IDLNSWLKKKK-SIDPWERKSYWKNMLEA--VHTIHQHG-IVHSDLKPANFL 159

Query: 195 LDELCNAKLAGFGAANYCSGGSN 217
           + +    KL  FG AN     + 
Sbjct: 160 IVD-GMLKLIDFGIANQMQPDTT 181

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 12/125 (9%)

Query: 89  TVVAVKARRYMASQTKLEE---EI-LLKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQRG 143
            V+A K            +   E+ +L   +   IV   G +  DG     +  E M  G
Sbjct: 59  LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHMDGG 116

Query: 144 SLRWNLREKGGPLDWEKRLA-IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           SL   + +K G +  E+ L  +++ +     +  +  K  I H ++   NIL++     K
Sbjct: 117 SLD-QVLKKAGRIP-EQILGKVSIAVIKG--LTYLREKHKIMHRDVKPSNILVNSRGEIK 172

Query: 203 LAGFG 207
           L  FG
Sbjct: 173 LCDFG 177

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 34/164 (20%), Positives = 63/164 (38%), Gaps = 24/164 (14%)

Query: 58  ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEI-LLKSSSH 116
           +L ++++++  G            R   R          +      ++ +EI +LK   H
Sbjct: 45  VLSKKKLIRQAGFP---------RRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDH 95

Query: 117 LNIVTL---LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQ 173
            N+V L   L  P +      +VFE + +G +   +     PL  ++       +     
Sbjct: 96  PNVVKLVEVLDDPNE--DHLYMVFELVNQGPV-MEVPTLK-PLSEDQARFYFQDLIKG-- 149

Query: 174 MV--CMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG 215
            +    Y K  I H +I   N+L+ E  + K+A FG +N   G 
Sbjct: 150 -IEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 19/116 (16%)

Query: 105 LEEEILLKSSSHLNIVTLLGYPQDGLQR-RCLVFEFMQ-----RGSLRWNLREKGGPLDW 158
           +    L+K      ++ +    +D     R  ++  MQ      G +  +       L  
Sbjct: 151 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVH 210

Query: 159 EKRLAIALQIDSA-----NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
             RL + LQ+        +  +         H  +   +I+LD+     L GF   
Sbjct: 211 HARLQLTLQVIRLLASLHHYGLV--------HTYLRPVDIVLDQRGGVFLTGFEHL 258

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 20/136 (14%)

Query: 90  VVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR---------------C 134
              +K  +Y  ++    E   L    H+NIV   G                         
Sbjct: 38  TYVIKRVKY-NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLF 96

Query: 135 LVFEFMQRGSLRWNLRE-KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNI 193
           +  EF  +G+L   + + +G  LD    L +  QI     +  ++SK  + + ++   NI
Sbjct: 97  IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKG--VDYIHSKK-LINRDLKPSNI 153

Query: 194 LLDELCNAKLAGFGAA 209
            L +    K+  FG  
Sbjct: 154 FLVDTKQVKIGDFGLV 169

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 24/142 (16%)

Query: 82  RAVSRNLTVVAVK----ARRYMASQTKLEEEI-LLKSSSH--LNIVTLLGYPQDGLQRRC 134
           + ++    + A+K          +      EI  L         I+ L  Y     Q   
Sbjct: 74  QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-QYIY 132

Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSA-----NQMVCMYSKPPIYHGNIT 189
           +V E      L   L++K   +D  +R +    +  A        +         H ++ 
Sbjct: 133 MVMECGN-IDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIV--------HSDLK 182

Query: 190 SDNILLDELCNAKLAGFGAANY 211
             N L+ +    KL  FG AN 
Sbjct: 183 PANFLIVD-GMLKLIDFGIANQ 203

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 23/139 (16%)

Query: 91  VAVK--ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWN 148
           VAVK        S    E ++L +S  H N++      +D  Q + +  E     +L+  
Sbjct: 51  VAVKRILPECF-SFADREVQLLRESDEHPNVIRYFCTEKDR-QFQYIAIELCA-ATLQEY 107

Query: 149 LREKGGPLDWEKRLAIALQIDSA-----NQMVCMYSKPPIYHGNITSDNILLDE-----L 198
           + +K       + + +  Q  S      +          I H ++   NIL+        
Sbjct: 108 VEQKDFAHLGLEPITLLQQTTSGLAHLHSLN--------IVHRDLKPHNILISMPNAHGK 159

Query: 199 CNAKLAGFGAANYCSGGSN 217
             A ++ FG     + G +
Sbjct: 160 IKAMISDFGLCKKLAVGRH 178

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 25/164 (15%), Positives = 48/164 (29%), Gaps = 20/164 (12%)

Query: 90  VVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLLGYPQDGLQRR-----------C 134
             A+K  R    +      + E   L    H  IV       +                 
Sbjct: 32  NYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLY 91

Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLA--IALQIDSANQMVCMYSKPPIYHGNITSDN 192
           +  +  ++ +L+  +  +    + E+ +   I LQI  A  +  ++SK  + H ++   N
Sbjct: 92  IQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA--VEFLHSKG-LMHRDLKPSN 148

Query: 193 ILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDINDFVG 236
           I        K+  FG           +               VG
Sbjct: 149 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVG 192

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 8/104 (7%)

Query: 106 EEEILLKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLA- 163
           + +++LKS     IV   G +  +      +  E M   + +   +   GP+  E+ L  
Sbjct: 73  DLDVVLKSHDCPYIVQCFGTFITNT--DVFIAMELMGTCAEKL-KKRMQGPIP-ERILGK 128

Query: 164 IALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG 207
           + + I  A  +  +  K  + H ++   NILLDE    KL  FG
Sbjct: 129 MTVAIVKA--LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFG 170

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 17/129 (13%)

Query: 90  VVAVKARRYMASQTK-----LEEEIL-LKSSSHLNIVTLLG-YPQDGLQRRCL--VFEFM 140
           VVA+K   Y   Q+      + +E+  L+   H N +   G Y    L+      V E+ 
Sbjct: 81  VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY----LREHTAWLVMEYC 136

Query: 141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN 200
             GS    L     PL  E  +A      +   +  ++S   I H ++ + NILL E   
Sbjct: 137 L-GSASDLLEVHKKPLQ-EVEIAAVTH-GALQGLAYLHSHNMI-HRDVKAGNILLSEPGL 192

Query: 201 AKLAGFGAA 209
            KL  FG+A
Sbjct: 193 VKLGDFGSA 201

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 15/129 (11%)

Query: 89  TVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQR 142
            ++AVK  R    + +      + +++++SS    IV   G   ++G     +  E M  
Sbjct: 48  QIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICMELMST 105

Query: 143 GS---LRWNLREKGGPLDWEKRLA-IALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
                 ++        +  E+ L  I L    A  +  +     I H +I   NILLD  
Sbjct: 106 SFDKFYKYVYSVLDDVIP-EEILGKITLATVKA--LNHLKENLKIIHRDIKPSNILLDRS 162

Query: 199 CNAKLAGFG 207
            N KL  FG
Sbjct: 163 GNIKLCDFG 171

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 89  TVVAVKARRYMASQTKLEE-----EILLKSSSHLNIVTLLG-YPQDGLQRRCLVFEFMQR 142
            ++AVK  R   +  + +      +I +++      VT  G   ++G     +  E M  
Sbjct: 33  QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICMELMD- 89

Query: 143 GSLR---WNLREKGGPLDWEKRLA-IALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
            SL      + +KG  +  E  L  IA+ I  A  +  ++SK  + H ++   N+L++ L
Sbjct: 90  TSLDKFYKQVIDKGQTIP-EDILGKIAVSIVKA--LEHLHSKLSVIHRDVKPSNVLINAL 146

Query: 199 CNAKLAGFG 207
              K+  FG
Sbjct: 147 GQVKMCDFG 155

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 19/139 (13%)

Query: 82  RAVSRNLT--VVAVKARRYMASQTKLE----EEILLKSSSHLNIVTLLGYPQDGLQRRC- 134
            A+ RN+    V +K   +            E   L    H +IV +  + +   +    
Sbjct: 98  LALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157

Query: 135 ---LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS-KPPIYHGNITS 190
              +V E++   SL+ +       L   + +A  L+I  A      Y     + + ++  
Sbjct: 158 VGYIVMEYVGGQSLKRSKG---QKLPVAEAIAYLLEILPALS----YLHSIGLVYNDLKP 210

Query: 191 DNILLDELCNAKLAGFGAA 209
           +NI+L E    KL   GA 
Sbjct: 211 ENIMLTE-EQLKLIDLGAV 228

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 26/139 (18%)

Query: 91  VAVK----ARRYMASQTKLEEEI-LLKSSSHLNIVTL---LGYPQDGLQRRCLVFEFMQR 142
           VA+K     +    S  KL  E+ ++K  +H NIV L   +   +       L+ E+   
Sbjct: 43  VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL----YLIMEYASG 98

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSA-----NQMVCMYSKPPIYHGNITSDNILLDE 197
           G + ++     G +  ++  +   QI SA      + +         H ++ ++N+LLD 
Sbjct: 99  GEV-FDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV--------HRDLKAENLLLDA 149

Query: 198 LCNAKLAGFGAANYCSGGS 216
             N K+A FG +N  + G 
Sbjct: 150 DMNIKIADFGFSNEFTVGG 168

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 39.1 bits (92), Expect = 9e-04
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 17/101 (16%)

Query: 115 SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSA--- 171
           SH NIV+++   ++      LV E+++  +L   +   G PL  +  +    QI      
Sbjct: 69  SHQNIVSMIDVDEED-DCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKH 126

Query: 172 ---NQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA 209
               ++V         H +I   NIL+D     K+  FG A
Sbjct: 127 AHDMRIV---------HRDIKPQNILIDSNKTLKIFDFGIA 158

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	304
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.98
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.98
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.98
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.98
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.98
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.98
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.98
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.98
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.98
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.98
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.96
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.88
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.84
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.73
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.36
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.24
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.21
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.82
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.76
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.68
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.44
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.39
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.33
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.28
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.09
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.02
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.93
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.85
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.72
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.5
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.26
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.16
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.15
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.11
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.02
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.98
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.95
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.75
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.39
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.25
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	92.7
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	92.13
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	86.45
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	84.85

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.8e-47  Score=338.15  Aligned_cols=230  Identities=21%  Similarity=0.262  Sum_probs=174.2

Q ss_pred             HhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+.+.++||+|+||.||++.+++.  ..+++.||||+++......  .|.+|+. |++++|||||+++|+|.+.+. ++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~-~~  119 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP-LL  119 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS-EE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE-EE
Confidence            3567788999999999999987643  2357899999998655443  7888888 999999999999999998744 59


Q ss_pred             EEEeecCCCChhhHhhhcC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC
Q 046594          135 LVFEFMQRGSLRWNLREKG--------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN  200 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~  200 (304)
                      ||||||++|+|.++++...              .+++|.+++.|+.|++.||+|||+.   +|+||||||+||||+.++.
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~  196 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV  196 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence            9999999999999997642              2699999999999999999999764   7999999999999999999


Q ss_pred             eeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC----CCc-----ceeccccCC
Q 046594          201 AKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV----GGQ-----ECLDQRLYI  247 (304)
Q Consensus       201 ~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~----~~~-----~~~~~~~~~  247 (304)
                      +||+|||+|+.......    ....++          ...++  +||||        +.    +..     ++++.....
T Consensus       197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g  276 (329)
T 4aoj_A          197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG  276 (329)
T ss_dssp             EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT
T ss_pred             EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999987654332    223333          22333  99999        11    111     111111100


Q ss_pred             CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          248 PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       248 ~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      .+.+.|..+++.+.+|+.+||+     .||++||||.||+++|+.+.+.+.
T Consensus       277 ~~~~~p~~~~~~~~~li~~cl~-----~dP~~RPs~~ei~~~L~~l~~~pp  322 (329)
T 4aoj_A          277 RELERPRACPPEVYAIMRGCWQ-----REPQQRHSIKDVHARLQALAQAPP  322 (329)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHCC-----SSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred             CCCCCcccccHHHHHHHHHHcC-----cChhHCcCHHHHHHHHHHHhhCCc
Confidence            1345667788999999999999     999999999999999999987654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.4e-47  Score=333.44  Aligned_cols=228  Identities=18%  Similarity=0.210  Sum_probs=177.1

Q ss_pred             HhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|.+.+.||+|+||.||++.++..  ..++..||||+++......  .|.+|+. |++++|||||+++|+|.+++. ++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~-~~   91 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP-LI   91 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS-EE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE-EE
Confidence            3577889999999999999987542  2357899999998655443  7888888 999999999999999998744 59


Q ss_pred             EEEeecCCCChhhHhhhcC------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCee
Q 046594          135 LVFEFMQRGSLRWNLREKG------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK  202 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~k  202 (304)
                      ||||||++|+|.++++..+            ..++|.+++.|+.|++.||+|||+.   +|+||||||+|||++.++.+|
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K  168 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK  168 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence            9999999999999997642            2799999999999999999999764   799999999999999999999


Q ss_pred             EcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC----CCc-----ceeccccCCCC
Q 046594          203 LAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV----GGQ-----ECLDQRLYIPN  249 (304)
Q Consensus       203 l~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~----~~~-----~~~~~~~~~~~  249 (304)
                      |+|||+|+.......    ....++          ...++  +||||        ..    +..     +++........
T Consensus       169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~  248 (299)
T 4asz_A          169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV  248 (299)
T ss_dssp             ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCC
T ss_pred             ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC
Confidence            999999987654332    112233          22333  99999        11    111     11111110012


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      ...|..++..+.+|+.+||+     .||++|||+.+|.+.|+++.+.
T Consensus       249 ~~~p~~~~~~~~~li~~cl~-----~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          249 LQRPRTCPQEVYELMLGCWQ-----REPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             CCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHHHhc
Confidence            45667788999999999999     9999999999999999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.7e-46  Score=328.86  Aligned_cols=220  Identities=18%  Similarity=0.233  Sum_probs=171.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+++.++||+|+||.||++.++      ..||||+++.....    ..|.+|+. +++++|||||+++|++.++ . ++
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~------~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~-~-~~  107 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWH------GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-N-LA  107 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESS------SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-S-CE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEEC------CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC-e-EE
Confidence            45678899999999999999764      35899998754322    17788888 9999999999999998653 3 59


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||||||++|+|.++++....++++.++..|+.|++.||+|||+.   +|+||||||+|||++.++++||+|||+|+....
T Consensus       108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred             EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence            99999999999999987766899999999999999999999764   899999999999999999999999999987643


Q ss_pred             CCC----CcccccC-------------cccc--ccccc--------------CCCCc------ceeccccCC-CCCCcch
Q 046594          215 GSN----RRNCEKT-------------SEMA--EDIND--------------FVGGQ------ECLDQRLYI-PNEKFKI  254 (304)
Q Consensus       215 ~~~----~~~~~~~-------------~~~s--~DV~S--------------~~~~~------~~~~~~~~~-~~~~~~~  254 (304)
                      ...    ....|+.             +.++  +||||              |....      ..+...... .....+.
T Consensus       185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  264 (307)
T 3omv_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK  264 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCT
T ss_pred             CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccc
Confidence            221    2233441             1244  89999              22211      111111100 0134556


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +++..+.+|+.+||+     .||++||||.||+++|+.+++
T Consensus       265 ~~~~~l~~li~~cl~-----~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          265 NCPKAMKRLVADCVK-----KVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             TSCHHHHHHHHHHTC-----SSSTTSCCHHHHHHHHHHHHT
T ss_pred             cchHHHHHHHHHHcC-----CCHhHCcCHHHHHHHHHHHhc
Confidence            778899999999999     999999999999999998865

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.1e-47  Score=334.97  Aligned_cols=223  Identities=17%  Similarity=0.192  Sum_probs=175.0

Q ss_pred             hhccccccCCccccceeeecceee--cCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .++..++||+|+||.||++.+.+.  ..+++.||||+++.....   ..|.+|+. +++++|||||+++|+|.+.+.. +
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~-~  105 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL-S  105 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC-E
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE-E
Confidence            567788999999999999987543  235689999999765433   27888888 9999999999999999887554 9


Q ss_pred             EEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC
Q 046594          135 LVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC  199 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~  199 (304)
                      ||||||++|+|.++|....               ..+++.+++.|+.|++.||+|||+.   +|+||||||+||||+.++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence            9999999999999996532               2689999999999999999999765   799999999999999999


Q ss_pred             CeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC----CCc-----ce---ecc
Q 046594          200 NAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV----GGQ-----EC---LDQ  243 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~----~~~-----~~---~~~  243 (304)
                      ++||+|||+|+.......    ....++          .+.++  +||||        +.    +..     ++   +..
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~  262 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN  262 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            999999999987644322    223333          23333  99999        11    111     11   111


Q ss_pred             ccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          244 RLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       244 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ..   ..+.|.+++..+.+|+.+||+     .||++||||.||+++|+.+.+
T Consensus       263 ~~---~~~~p~~~~~~~~~li~~C~~-----~dP~~RPs~~ei~~~L~a~~n  306 (308)
T 4gt4_A          263 RQ---VLPCPDDCPAWVYALMIECWN-----EFPSRRPRFKDIHSRLRAWGN  306 (308)
T ss_dssp             TC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHTSCC
T ss_pred             CC---CCCCcccchHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHhccC
Confidence            22   345667788999999999999     999999999999999987644

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.6e-47  Score=337.99  Aligned_cols=219  Identities=17%  Similarity=0.195  Sum_probs=168.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      +.||++++.||+|+||.||++.++   .+|+.||||++.......    .+.+|+. |++++|||||++++++.+. +.+
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~   98 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKST---EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN-GSL   98 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEET---TTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-TEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEEC---CCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC-CEE
Confidence            358999999999999999999986   457999999997553222    6778888 9999999999999999887 555


Q ss_pred             EEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |||||||+||+|.+++...+. .+++.+++.|+.||+.||+|||+.   +|+||||||+|||++.+|.+||+|||+|+..
T Consensus        99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  175 (350)
T 4b9d_A           99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL  175 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceee
Confidence            999999999999999976543 689999999999999999999764   8999999999999999999999999999987


Q ss_pred             CCCCC--CcccccCcc----------cc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEKTSE----------MA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~~~~----------~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ...+|+..|          ++  +||||              |....  +++...........+...+..+.+
T Consensus       176 ~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~  255 (350)
T 4b9d_A          176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRS  255 (350)
T ss_dssp             CHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHH
T ss_pred             cCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHH
Confidence            54332  233444333          23  99999              33222  222111100012345566788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      |+.+||+     .||++|||+.|+++|
T Consensus       256 li~~~L~-----~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          256 LVSQLFK-----RNPRDRPSVNSILEK  277 (350)
T ss_dssp             HHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHcc-----CChhHCcCHHHHhcC
Confidence            9999999     999999999999975

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.2e-45  Score=323.98  Aligned_cols=224  Identities=21%  Similarity=0.188  Sum_probs=173.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCC---ceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ---RRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~---~~~  134 (304)
                      ++|.+.+.||+|+||.||++.++     |+.||||+++...... .++.|+. +.+++|||||+++|++...+.   .+|
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~-----g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~   77 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR-----GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-----TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-----CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence            57888999999999999999763     6899999998665544 4445666 788999999999999986543   469


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY-----SKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~-----~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ||||||++|+|.++++..  ++++..+..++.|++.||+|||+.     ++++|+||||||+|||++.++++||+|||+|
T Consensus        78 lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            999999999999999875  599999999999999999999964     4668999999999999999999999999999


Q ss_pred             cccCCCCC------CcccccCc----------------ccc--ccccc-----------CCC---C---c----------
Q 046594          210 NYCSGGSN------RRNCEKTS----------------EMA--EDIND-----------FVG---G---Q----------  238 (304)
Q Consensus       210 ~~~~~~~~------~~~~~~~~----------------~~s--~DV~S-----------~~~---~---~----------  238 (304)
                      +.......      ....|+..                .++  +||||           .+.   .   +          
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence            87754432      11234411                133  89999           000   0   0          


Q ss_pred             --------ceeccccCCCCCCcc-----hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          239 --------ECLDQRLYIPNEKFK-----ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       239 --------~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                              .+.+..+   +..+|     .++...+.+|+.+||+     .||++||||.||++.|+++.+.++
T Consensus       236 ~~~~~~~~~~~~~~~---rp~~p~~~~~~~~~~~l~~li~~cl~-----~dP~~RPt~~ei~~~L~~l~~~~~  300 (303)
T 3hmm_A          236 PSVEEMRKVVCEQKL---RPNIPNRWQSCEALRVMAKIMRECWY-----ANGAARLTALRIKKTLSQLSQQEG  300 (303)
T ss_dssp             CCHHHHHHHHTTSCC---CCCCCGGGGSSHHHHHHHHHHHTTCC-----SSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             chHHHHHHHHhcccC---CCCCCccccchHHHHHHHHHHHHHcc-----cCHhHCcCHHHHHHHHHHHHHHcC
Confidence                    0111222   12222     3456789999999999     999999999999999999987543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=8.2e-46  Score=323.47  Aligned_cols=219  Identities=21%  Similarity=0.224  Sum_probs=170.6

Q ss_pred             hh-ccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeC---CCC
Q 046594           61 RR-RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQD---GLQ  131 (304)
Q Consensus        61 ~~-~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~---~~~  131 (304)
                      || +..+.||+|+||.||++.++   ..+..||+|++.......    .|.+|+. +++++|||||+++++|.+   .+.
T Consensus        26 r~~~~~~~iG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~  102 (290)
T 3fpq_A           26 RFLKFDIEIGRGSFKTVYKGLDT---ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEE
T ss_pred             ceEEeeeEEecCcCcEEEEEEEC---CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCc
Confidence            44 67788999999999999886   357899999997543222    6778888 999999999999999864   234


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCeeEccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAKLAGFGAAN  210 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfgla~  210 (304)
                      .+|||||||++|+|.+++.+.+ .+++..+..|+.|++.||+|||+. .++|+||||||+|||++ .++.+||+|||+|+
T Consensus       103 ~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~  180 (290)
T 3fpq_A          103 CIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             EEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence            5799999999999999998876 899999999999999999999773 33499999999999998 47999999999998


Q ss_pred             ccCCCCCCcccccCcccc-----------ccccc--------------CCCCc---ceeccccC-CCCCCcchHHHHHHH
Q 046594          211 YCSGGSNRRNCEKTSEMA-----------EDIND--------------FVGGQ---ECLDQRLY-IPNEKFKITSLAKLG  261 (304)
Q Consensus       211 ~~~~~~~~~~~~~~~~~s-----------~DV~S--------------~~~~~---~~~~~~~~-~~~~~~~~~~~~~l~  261 (304)
                      ........+.+|+..+++           +||||              |....   .+...... ..+..++...++++.
T Consensus       181 ~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  260 (290)
T 3fpq_A          181 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK  260 (290)
T ss_dssp             GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHH
T ss_pred             eCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHH
Confidence            765544444556644433           89999              32211   11111110 002234455567899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +|+.+||.     .||++|||+.|+++|
T Consensus       261 ~li~~~L~-----~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          261 EIIEGCIR-----QNKDERYSIKDLLNH  283 (290)
T ss_dssp             HHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHcc-----CChhHCcCHHHHhcC
Confidence            99999999     999999999999875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4.8e-46  Score=326.88  Aligned_cols=216  Identities=17%  Similarity=0.135  Sum_probs=175.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..|++.+.||+|+||.||++.++   .+|+.||||++.....     ...+.+|+. |++++|||||++++++.+. +.+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~---~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-~~~  107 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLAREL---ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD-EKL  107 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-SEE
T ss_pred             cccEEEEEEecccCeEEEEEEEC---CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-CEE
Confidence            47999999999999999999987   4579999999975422     226777888 9999999999999999987 556


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+|||||+||+|.+++.+.+ .+++..+..|+.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus       108 yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          108 YFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             EEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            99999999999999998876 799999999999999999999765   89999999999999999999999999999875


Q ss_pred             CCCC----CcccccCcccc------------ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          214 GGSN----RRNCEKTSEMA------------EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       214 ~~~~----~~~~~~~~~~s------------~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ....    .+.+|+..|++            +||||              |....  +++.... .....+|...++++.
T Consensus       184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~-~~~~~~p~~~s~~~~  262 (311)
T 4aw0_A          184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII-KLEYDFPEKFFPKAR  262 (311)
T ss_dssp             TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HTCCCCCTTCCHHHH
T ss_pred             CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCcccCHHHH
Confidence            4322    34566644444            99999              33222  1211111 012345666778899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +|+.+||+     .||++|||+.|++++
T Consensus       263 dli~~lL~-----~dp~~R~t~~e~~~~  285 (311)
T 4aw0_A          263 DLVEKLLV-----LDATKRLGCEEMEGY  285 (311)
T ss_dssp             HHHHHHSC-----SSGGGSTTSGGGTCH
T ss_pred             HHHHHHcc-----CCHhHCcChHHHcCC
Confidence            99999999     999999999987543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.1e-45  Score=331.43  Aligned_cols=227  Identities=20%  Similarity=0.226  Sum_probs=180.7

Q ss_pred             HhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCC-CcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSH-LNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h-~niv~~~~~~~~~~~~  132 (304)
                      .+|++.+.||+|+||.||++.+++..  ..++.||||.++......   .|..|+. |++++| ||||+++|+|...+..
T Consensus        64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~  143 (353)
T 4ase_A           64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  143 (353)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred             HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence            57899999999999999999887542  245789999998655443   6677777 888865 8999999999877666


Q ss_pred             eEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC
Q 046594          133 RCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE  197 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~  197 (304)
                      ++||||||++|+|.++|+...               ..+++..+..|+.|++.||+|||+.   +|+||||||+|||++.
T Consensus       144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~  220 (353)
T 4ase_A          144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE  220 (353)
T ss_dssp             CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred             EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCC
Confidence            799999999999999997632               2589999999999999999999765   7999999999999999


Q ss_pred             CCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc---------------CCCCc------ce
Q 046594          198 LCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND---------------FVGGQ------EC  240 (304)
Q Consensus       198 ~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S---------------~~~~~------~~  240 (304)
                      ++.+||+|||+|+.......    ....++          ...++  +||||               |+...      ..
T Consensus       221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~  300 (353)
T 4ase_A          221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  300 (353)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred             CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            99999999999997755433    222333          22233  99999               11111      11


Q ss_pred             eccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          241 LDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +....   +...|..+++++.+++.+||+     .||++|||+.||+++|+++.+..
T Consensus       301 i~~g~---~~~~p~~~~~~~~~li~~c~~-----~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          301 LKEGT---RMRAPDYTTPEMYQTMLDCWH-----GEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             HHHTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHcCC---CCCCCccCCHHHHHHHHHHcC-----cChhHCcCHHHHHHHHHHHHHHh
Confidence            11222   345667778899999999999     99999999999999999997654

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.3e-45  Score=328.62  Aligned_cols=215  Identities=21%  Similarity=0.232  Sum_probs=174.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .+|++.++||+|+||.||++.++   .+|+.||||++.......  .+.+|+. |++++|||||++++++.+. +.+|||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~---~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-~~~~iv  149 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVR---SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-DELWVV  149 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET-TEEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEEC---CCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-CEEEEE
Confidence            46999999999999999999986   457999999997544332  6667777 9999999999999999988 455999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||||++|+|.+++...  .+++..+..|+.|++.||+|||+.   +|+||||||+|||++.+|.+||+|||+|+.+....
T Consensus       150 mEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  224 (346)
T 4fih_A          150 MEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  224 (346)
T ss_dssp             ECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             EeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence            9999999999999764  699999999999999999999765   89999999999999999999999999999876544


Q ss_pred             C--CcccccCcccc------------ccccc--------------CCCCc--ce---eccccCCCCCCcchHHHHHHHHH
Q 046594          217 N--RRNCEKTSEMA------------EDIND--------------FVGGQ--EC---LDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       217 ~--~~~~~~~~~~s------------~DV~S--------------~~~~~--~~---~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .  .+.+|+..|++            +||||              |....  +.   +.... .+....+...++.+.+|
T Consensus       225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dl  303 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRLKNLHKVSPSLKGF  303 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS-CCCCSCGGGSCHHHHHH
T ss_pred             CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CCCCCccccCCHHHHHH
Confidence            3  44566633333            89999              32222  11   11111 01223345677899999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||+     .||++|||+.|+++|
T Consensus       304 i~~~L~-----~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          304 LDRLLV-----RDPAQRATAAELLKH  324 (346)
T ss_dssp             HHHHSC-----SSTTTSCCHHHHTTC
T ss_pred             HHHHcC-----CChhHCcCHHHHhcC
Confidence            999999     999999999999986

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.7e-45  Score=316.79  Aligned_cols=216  Identities=19%  Similarity=0.195  Sum_probs=161.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||+|+++.....     ..+.+|+. +++++|||||++++++.+. +.
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-~~   87 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHT---TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK-DE   87 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECT---TTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-SE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-CE
Confidence            368999999999999999999886   45799999999754322     26778888 9999999999999999887 55


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+ +|+|.+++...+ ++++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+..
T Consensus        88 ~~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~  162 (275)
T 3hyh_A           88 IIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM  162 (275)
T ss_dssp             EEEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---
T ss_pred             EEEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeec
Confidence            59999999 579999998776 899999999999999999999764   8999999999999999999999999999877


Q ss_pred             CCCCC-Cccccc-----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN-RRNCEK-----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ..... .+.+|+           ..+.+  +||||              |....  ++..... .....+|...++.+.+
T Consensus       163 ~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~  241 (275)
T 3hyh_A          163 TDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS-NGVYTLPKFLSPGAAG  241 (275)
T ss_dssp             ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HTCCCCCTTSCHHHHH
T ss_pred             CCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHH
Confidence            65443 334454           22222  89999              32222  1111111 0123455667788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      |+.+||+     .||++|||+.|+++|
T Consensus       242 li~~~L~-----~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          242 LIKRMLI-----VNPLNRISIHEIMQD  263 (275)
T ss_dssp             HHHHHSC-----SSGGGSCCHHHHHHC
T ss_pred             HHHHHcc-----CChhHCcCHHHHHcC
Confidence            9999999     999999999999985

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1e-44  Score=322.00  Aligned_cols=221  Identities=19%  Similarity=0.122  Sum_probs=173.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      ..|++.++||+|+||.||++.++   .+|+.||||+++...   ...+|+. ++.++|||||++++++.++ +.+|||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~---~~g~~vAiK~i~~~~---~~~~E~~il~~l~HpnIV~l~~~~~~~-~~~~ivmE  130 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDK---QTGFQCAVKKVRLEV---FRVEELVACAGLSSPRIVPLYGAVREG-PWVNIFME  130 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEETTT---CCTHHHHTTTTCCCTTBCCEEEEEEET-TEEEEEEC
T ss_pred             hheEeCcEeccCCCeEEEEEEEC---CCCCEEEEEEECHHH---hHHHHHHHHHhCCCCCCCcEEEEEEEC-CEEEEEEe
Confidence            35788899999999999999986   457999999997543   2235677 9999999999999999887 45599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEcccccccccCCCCC
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+||+|.+++...+ .+++..+..|+.|++.||+|||+.   +|+||||||+|||++.+| .+||+|||+|+.......
T Consensus       131 y~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~  206 (336)
T 4g3f_A          131 LLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL  206 (336)
T ss_dssp             CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred             ccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence            999999999998876 799999999999999999999654   899999999999999988 699999999987754321


Q ss_pred             -------CcccccCcccc------------ccccc--------------CCCCc--ceecccc--CCCCCCcchHHHHHH
Q 046594          218 -------RRNCEKTSEMA------------EDIND--------------FVGGQ--ECLDQRL--YIPNEKFKITSLAKL  260 (304)
Q Consensus       218 -------~~~~~~~~~~s------------~DV~S--------------~~~~~--~~~~~~~--~~~~~~~~~~~~~~l  260 (304)
                             ...+|+..|++            +||||              |....  +++....  ..+..+++...++.+
T Consensus       207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~  286 (336)
T 4g3f_A          207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLT  286 (336)
T ss_dssp             -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHH
T ss_pred             ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHH
Confidence                   12345533333            89999              22211  1111111  001134566778999


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      .+++.+||+     .||++|||+.|++++|....+.
T Consensus       287 ~~li~~~L~-----~dP~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          287 AQAIQEGLR-----KEPVHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             HHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcc-----CCHhHCcCHHHHHHHHHHHHhh
Confidence            999999999     9999999999999999877653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.5e-45  Score=322.09  Aligned_cols=219  Identities=19%  Similarity=0.158  Sum_probs=168.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++.+.||+|+||.||++.+......++.||||+++......    .+..|+. |++++|||||++++++.+. +.+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-~~~~  102 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE-GKLY  102 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET-TEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-CEEE
Confidence            47999999999999999999875444567899999997543221    6777888 9999999999999999987 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +|||||+||+|.+++.+.+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.+|.+||+|||+|+....
T Consensus       103 ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             EEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             EEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            9999999999999998876 899999999999999999999765   899999999999999999999999999987644


Q ss_pred             CCC--CcccccCcccc------------ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          215 GSN--RRNCEKTSEMA------------EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       215 ~~~--~~~~~~~~~~s------------~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ...  .+.+|+..+++            +||||              |....  +++.... .....+|...++++.+|+
T Consensus       179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li  257 (304)
T 3ubd_A          179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL-KAKLGMPQFLSPEAQSLL  257 (304)
T ss_dssp             --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHHHHH
T ss_pred             CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHH-cCCCCCCCcCCHHHHHHH
Confidence            333  44556633333            89999              33222  1111111 012345666788999999


Q ss_pred             HHhccccCCCCCCCCCCCH-----HHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKI-----VDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~-----~~vl~~  289 (304)
                      .+||+     .||++|||+     +|+++|
T Consensus       258 ~~~L~-----~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          258 RMLFK-----RNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             HHHTC-----SSGGGSTTCSTTTHHHHHTS
T ss_pred             HHHcc-----cCHHHCCCCCcCCHHHHHcC
Confidence            99999     999999984     677764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-44  Score=330.10  Aligned_cols=215  Identities=21%  Similarity=0.232  Sum_probs=174.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .+|++.++||+|+||.||++.++   .+|+.||||++.......  .+.+|+. |+.++|||||++++++.+. +.+|||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~---~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-~~~~iV  226 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVR---SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-DELWVV  226 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET-TEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEEC---CCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC-CEEEEE
Confidence            46999999999999999999987   457999999997654333  6777777 9999999999999999987 456999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||||+||+|.+++...  .+++..+..|+.||+.||+|||+.   +|+||||||+||||+.+|.+||+|||+|+.+....
T Consensus       227 mEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          227 MEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             EECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             EeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            9999999999999764  599999999999999999999765   89999999999999999999999999999876543


Q ss_pred             C--CcccccCcccc------------ccccc--------------CCCCc--ce---eccccCCCCCCcchHHHHHHHHH
Q 046594          217 N--RRNCEKTSEMA------------EDIND--------------FVGGQ--EC---LDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       217 ~--~~~~~~~~~~s------------~DV~S--------------~~~~~--~~---~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .  ...+|+..|++            +||||              |....  +.   +.... .+....+...+..+.+|
T Consensus       302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dl  380 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRLKNLHKVSPSLKGF  380 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCCSCTTSSCHHHHHH
T ss_pred             ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CCCCcccccCCHHHHHH
Confidence            3  44556644333            89999              32222  11   11111 01123334567889999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||.     .||++|||+.|+++|
T Consensus       381 i~~~L~-----~dP~~R~ta~ell~H  401 (423)
T 4fie_A          381 LDRLLV-----RDPAQRATAAELLKH  401 (423)
T ss_dssp             HHHHSC-----SSTTTSCCHHHHTTC
T ss_pred             HHHHcC-----CChhHCcCHHHHhcC
Confidence            999999     999999999999986

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.4e-44  Score=313.19  Aligned_cols=218  Identities=16%  Similarity=0.149  Sum_probs=162.0

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCC--
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ--  131 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~--  131 (304)
                      +...|++++.||+|+||.||++.++   .+|+.||||+++....+.   .+.+|+. |++++|||||++++++.+.+.  
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~   79 (299)
T 4g31_A            3 YLTDFEPIQCLGRGGFGVVFEAKNK---VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHHHEEEEEEEEECC--EEEEEEET---TTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---
T ss_pred             cchhCEEeeEEecCCCeEEEEEEEC---CCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccc
Confidence            3567999999999999999999886   457999999997654433   6677888 999999999999999875432  


Q ss_pred             ---------ceEEEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC
Q 046594          132 ---------RRCLVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN  200 (304)
Q Consensus       132 ---------~~~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~  200 (304)
                               .+|+|||||++|+|.+++.....  ..++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.
T Consensus        80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~  156 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDV  156 (299)
T ss_dssp             -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred             cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCc
Confidence                     36899999999999999987653  456777899999999999999765   8999999999999999999


Q ss_pred             eeEcccccccccCCCCC--------------CcccccCcccc------------ccccc---------CCCCc--c---e
Q 046594          201 AKLAGFGAANYCSGGSN--------------RRNCEKTSEMA------------EDIND---------FVGGQ--E---C  240 (304)
Q Consensus       201 ~kl~Dfgla~~~~~~~~--------------~~~~~~~~~~s------------~DV~S---------~~~~~--~---~  240 (304)
                      +||+|||+|+.......              .+.+|+..|++            +||||         +|...  +   .
T Consensus       157 vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~~  236 (299)
T 4g31_A          157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRT  236 (299)
T ss_dssp             EEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH
T ss_pred             EEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHHH
Confidence            99999999987754322              12245533333            89999         32221  1   1


Q ss_pred             eccccCCCCCCcc---hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          241 LDQRLYIPNEKFK---ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       241 ~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +....   ...+|   ...++.+.+|+.+||+     .||++|||+.|+++|
T Consensus       237 ~~~~~---~~~~p~~~~~~~~~~~~li~~~L~-----~dP~~Rps~~eil~h  280 (299)
T 4g31_A          237 LTDVR---NLKFPPLFTQKYPCEYVMVQDMLS-----PSPMERPEAINIIEN  280 (299)
T ss_dssp             HHHHH---TTCCCHHHHHHCHHHHHHHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHh---cCCCCCCCcccCHHHHHHHHHHcC-----CChhHCcCHHHHhcC
Confidence            11111   12233   3345667899999999     999999999999874

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.1e-42  Score=312.52  Aligned_cols=216  Identities=16%  Similarity=0.187  Sum_probs=164.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC-----
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG-----  129 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~-----  129 (304)
                      .+|++++.||+|+||.||++.++   .+|+.||||+++......    .+.+|+. |+.++|||||++++++...     
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~---~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~  130 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRR---LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE  130 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred             CCeEEEEEEecccCeEEEEEEEC---CCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccccc
Confidence            47999999999999999999986   457999999997543322    5566777 9999999999999987542     


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ...+|||||||+ |+|.+++...+ ++++..+..|+.||+.||+|||+.   ||+||||||+|||++.++.+||+|||+|
T Consensus       131 ~~~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla  205 (398)
T 4b99_A          131 FKSVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA  205 (398)
T ss_dssp             CCCEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CCEEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence            345799999996 58999998766 899999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC------CcccccC-----------cccc--ccccc--------------CCCCc------ceec------c-
Q 046594          210 NYCSGGSN------RRNCEKT-----------SEMA--EDIND--------------FVGGQ------ECLD------Q-  243 (304)
Q Consensus       210 ~~~~~~~~------~~~~~~~-----------~~~s--~DV~S--------------~~~~~------~~~~------~-  243 (304)
                      +.+.....      .+.+|+.           .+++  +||||              |.+..      .++.      . 
T Consensus       206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~  285 (398)
T 4b99_A          206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA  285 (398)
T ss_dssp             BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred             eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence            87643211      2334442           2333  89999              33222      0000      0 


Q ss_pred             ---------------ccCCCCCC-----cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          244 ---------------RLYIPNEK-----FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       244 ---------------~~~~~~~~-----~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                     .+. ....     .....+..+.+|+.+||.     .||++|||+.|+++|
T Consensus       286 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~dLl~~mL~-----~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          286 VIQAVGAERVRAYIQSLP-PRQPVPWETVYPGADRQALSLLGRMLR-----FEPSARISAAAALRH  345 (398)
T ss_dssp             GTC-----CHHHHHHSSC-CCCCCCHHHHSTTCCHHHHHHHHHHSC-----SSTTTSCCHHHHTTS
T ss_pred             HhhhhhhhhhhhhhhcCC-CcCCCCHHHhCCCCCHHHHHHHHHHCc-----CChhHCcCHHHHhcC
Confidence                           000 0000     112345778999999999     999999999999986

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.3e-40  Score=315.11  Aligned_cols=218  Identities=15%  Similarity=0.133  Sum_probs=175.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +.+|++.+.||+|+||.||++.++   .+|+.||+|++......+  .+.+|+. |+.++|||||++++++.+. ..+||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~---~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-~~~~i  231 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTER---ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD-NEMVM  231 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS-SEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEEC---CCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-CEEEE
Confidence            368999999999999999999987   457999999997655433  6777888 9999999999999999887 55699


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC--CCeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL--CNAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~--~~~kl~Dfgla~~~~  213 (304)
                      |||||+||+|.+++....+.+++..+..|+.||+.||+|||+.   +|+||||||+|||++.+  +.+||+|||+|+.+.
T Consensus       232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred             EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence            9999999999999976655899999999999999999999765   89999999999999854  899999999999887


Q ss_pred             CCCC-CcccccCccc----------c--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RRNCEKTSEM----------A--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~~~~~----------s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... ...+|+..++          +  +||||              |....  +    +...... .........+..+
T Consensus       309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s~~~  387 (573)
T 3uto_A          309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN-MDDSAFSGISEDG  387 (573)
T ss_dssp             TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC-CCSGGGTTSCHHH
T ss_pred             CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC-CCcccccCCCHHH
Confidence            6554 4445553333          2  89999              32222  1    1111110 0223334567889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+|+.+||.     .||.+|||+.|+++|
T Consensus       388 ~dli~~~L~-----~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          388 KDFIRKLLL-----ADPNTRMTIHQALEH  411 (573)
T ss_dssp             HHHHHTTSC-----SSGGGSCCHHHHHHS
T ss_pred             HHHHHHHcc-----CChhHCcCHHHHhcC
Confidence            999999999     999999999999986

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.1e-39  Score=293.84  Aligned_cols=148  Identities=13%  Similarity=0.151  Sum_probs=128.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||+|.++.....++.||+|.+........+..|+. |+.+ +||||+++++++.+. +++|+|
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~-~~~~lv   98 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKN-DHVVIA   98 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEET-TEEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEEC-CEEEEE
Confidence            4679999999999999999998764444578999999977665556666776 8877 799999999999887 556999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-CCeeEcccccccccCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-CNAKLAGFGAANYCSG  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfgla~~~~~  214 (304)
                      |||+++|+|.+++.    .+++.++..++.|++.||+|||+.   ||+||||||+|||++.+ +.+||+|||+|+....
T Consensus        99 mE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A           99 MPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             EECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             EeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            99999999999984    589999999999999999999765   89999999999999876 7999999999986543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.2e-40  Score=314.37  Aligned_cols=216  Identities=13%  Similarity=0.057  Sum_probs=171.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHH---HHH-hhCCCCCcccceeeeeeCCC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEE---EIL-LKSSSHLNIVTLLGYPQDGL  130 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~---e~~-l~~l~h~niv~~~~~~~~~~  130 (304)
                      ..|++.+.||+|+||.||++.++   .+|+.||+|++......     ....+   +.. ++.++|||||++++++.+. 
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~---~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~-  264 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP-  264 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS-
T ss_pred             HHeEEEEEEecccCeEEEEEEEC---CCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC-
Confidence            45888899999999999999987   45899999999753221     12222   234 6788999999999999988 


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ..+|+|||||+||+|.+++...+ .+++..+..|+.||+.||+|||+.   ||+||||||+||||+.+|.+||+|||+|+
T Consensus       265 ~~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~  340 (689)
T 3v5w_A          265 DKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC  340 (689)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence            55699999999999999998876 899999999999999999999654   89999999999999999999999999999


Q ss_pred             ccCCCCCCcccccCccc-----------c--ccccc-----------CCCCc--------ceeccccCCCCCCcchHHHH
Q 046594          211 YCSGGSNRRNCEKTSEM-----------A--EDIND-----------FVGGQ--------ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       211 ~~~~~~~~~~~~~~~~~-----------s--~DV~S-----------~~~~~--------~~~~~~~~~~~~~~~~~~~~  258 (304)
                      ........+.+|+..|+           +  +||||           .++..        ++..... .....+|...+.
T Consensus       341 ~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~-~~~~~~p~~~S~  419 (689)
T 3v5w_A          341 DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-TMAVELPDSFSP  419 (689)
T ss_dssp             ECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH-HCCCCCCTTSCH
T ss_pred             ecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc-CCCCCCCccCCH
Confidence            88766655566663333           2  89999           22211        1111111 113456677788


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      .+.+|+.+||.     .||.+|++     +.||++|
T Consensus       420 ~a~dLI~~lL~-----~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          420 ELRSLLEGLLQ-----RDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             HHHHHHHHHTC-----SCGGGCTTCSSSTHHHHTTS
T ss_pred             HHHHHHHHHcc-----CCHhHCCCCCCCCHHHHhcC
Confidence            99999999999     99999998     6888765

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.1e-38  Score=282.11  Aligned_cols=230  Identities=17%  Similarity=0.216  Sum_probs=181.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++.....+..||||+++......   .+.+|+. ++.++||||+++++++.+.+. ++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~  126 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL-AM  126 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC-CE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc-cE
Confidence            468999999999999999999987655566789999998654333   6777888 999999999999999987744 49


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED  203 (325)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred             EEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence            99999999999999987766899999999999999999999765   899999999999999999999999999987754


Q ss_pred             CCC-----Cccccc----------Ccccc--ccccc--------CCCCc---------ce---eccccCCCCCCcchHHH
Q 046594          215 GSN-----RRNCEK----------TSEMA--EDIND--------FVGGQ---------EC---LDQRLYIPNEKFKITSL  257 (304)
Q Consensus       215 ~~~-----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~---~~~~~~~~~~~~~~~~~  257 (304)
                      ...     ....++          ...++  +||||        ...+.         +.   +....   ....+..++
T Consensus       204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  280 (325)
T 3kul_A          204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY---RLPAPMGCP  280 (325)
T ss_dssp             ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC---CCCCCTTCC
T ss_pred             CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC---CCCCCCCcC
Confidence            332     111111          12233  89999        11011         11   11122   234556677


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhccc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSV  300 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~~  300 (304)
                      ..+.+++.+||.     .||++|||+.++++.|+.+.+...+.
T Consensus       281 ~~l~~li~~~l~-----~dp~~Rps~~eil~~L~~l~~~~~~~  318 (325)
T 3kul_A          281 HALHQLMLDCWH-----KDRAQRPRFSQIVSVLDALIRSPESL  318 (325)
T ss_dssp             HHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred             HHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHhCcccc
Confidence            889999999999     99999999999999999998866543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=8.8e-38  Score=277.73  Aligned_cols=222  Identities=24%  Similarity=0.305  Sum_probs=179.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.+.    +++.||||++.......   .+.+|+. ++.++||||+++++++...+.. +
T Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-~  103 (326)
T 3uim_A           29 SDNFSNKNILGRGGFGKVYKGRLA----DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-L  103 (326)
T ss_dssp             TTSSCSTTEEECCSSSEEEEECCS----SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCC-E
T ss_pred             hhccccceeEecCCCcEEEEEEec----CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCce-E
Confidence            468999999999999999998753    57899999998655433   6778888 9999999999999999887555 9


Q ss_pred             EEEeecCCCChhhHhhhcCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGG---PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~---~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      +||||+++|+|.+++.....   .+++..+..++.|++.||+|||+.+..+++||||||+|||++.++.+||+|||++..
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~  183 (326)
T 3uim_A          104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL  183 (326)
T ss_dssp             EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccc
Confidence            99999999999999987543   599999999999999999999887777999999999999999999999999999987


Q ss_pred             cCCCCC---CcccccC----------cccc--ccccc-----------CCCC--------------------------cc
Q 046594          212 CSGGSN---RRNCEKT----------SEMA--EDIND-----------FVGG--------------------------QE  239 (304)
Q Consensus       212 ~~~~~~---~~~~~~~----------~~~s--~DV~S-----------~~~~--------------------------~~  239 (304)
                      ......   ....++.          ..++  +||||           ..+.                          ..
T Consensus       184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (326)
T 3uim_A          184 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA  263 (326)
T ss_dssp             CCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTT
T ss_pred             cCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhh
Confidence            654332   2222332          2223  89999           1111                          12


Q ss_pred             eeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          240 CLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ..+..+   ...++...+..+.+++.+||+     .||.+|||+.+++++|++.
T Consensus       264 ~~~~~~---~~~~~~~~~~~l~~li~~cl~-----~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          264 LVDVDL---QGNYKDEEVEQLIQVALLCTQ-----SSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             SSCTTC---TTSCCHHHHHHHHHHHHHHTC-----SCGGGSCCHHHHHHHHHTS
T ss_pred             hcChhh---ccccCHHHHHHHHHHHHHHhC-----cCCccCCCHHHHHHHhcCc
Confidence            233333   456677888999999999999     9999999999999999864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.5e-37  Score=275.80  Aligned_cols=225  Identities=27%  Similarity=0.370  Sum_probs=181.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .+|++.+.||+|+||.||++.++    +++.||||+........  .+.+|+. ++.++||||+++++++...+.. ++|
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~lv  113 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLR----DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM-ILI  113 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECT----TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC-EEE
T ss_pred             hccCccceeecCCCeeEEEEEEC----CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE-EEE
Confidence            58999999999999999998863    57899999987654433  7778888 9999999999999999887555 999


Q ss_pred             EeecCCCChhhHhhhcCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          137 FEFMQRGSLRWNLREKGG---PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~---~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |||+++|+|.+++.....   .+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++...
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  190 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGT  190 (321)
T ss_dssp             EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred             EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            999999999999976542   589999999999999999999764   89999999999999999999999999998654


Q ss_pred             CCCC----Cccccc----------Ccccc--ccccc--------------CCCC---------------------cceec
Q 046594          214 GGSN----RRNCEK----------TSEMA--EDIND--------------FVGG---------------------QECLD  242 (304)
Q Consensus       214 ~~~~----~~~~~~----------~~~~s--~DV~S--------------~~~~---------------------~~~~~  242 (304)
                      ....    ....++          ...++  +||||              +...                     ...++
T Consensus       191 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (321)
T 2qkw_B          191 ELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD  270 (321)
T ss_dssp             SSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSS
T ss_pred             cccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcC
Confidence            3221    111122          12223  99999              1110                     01223


Q ss_pred             cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhccc
Q 046594          243 QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSV  300 (304)
Q Consensus       243 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~~  300 (304)
                      +.+   ....+.+.+..+.+++.+||+     .||++|||+.|++++|+.+.+..++.
T Consensus       271 ~~~---~~~~~~~~~~~l~~li~~~l~-----~dP~~Rps~~ell~~L~~~l~~~~~~  320 (321)
T 2qkw_B          271 PNL---ADKIRPESLRKFGDTAVKCLA-----LSSEDRPSMGDVLWKLEYALRLQESV  320 (321)
T ss_dssp             SSC---TTCSCHHHHHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHSSCCC
T ss_pred             hhh---ccccCHHHHHHHHHHHHHHcC-----CCcccCcCHHHHHHHHHHHhhcccCc
Confidence            333   345667888999999999999     99999999999999999999877654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.5e-38  Score=278.51  Aligned_cols=228  Identities=17%  Similarity=0.233  Sum_probs=176.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.+|+|++.......  .+.+|+. +++++||||+++++++.+++ ..++
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~---~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~l   84 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHR---ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-RLNF   84 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET---TTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-EEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEEC---CCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC-eeEE
Confidence            468999999999999999999876   357899999986544333  7778888 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++.....
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred             EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence            9999999999999998666899999999999999999999765   8999999999999999999999999999876443


Q ss_pred             CCC----------------ccccc----------Ccccc--ccccc-----------CCCCcceeccccC-------CCC
Q 046594          216 SNR----------------RNCEK----------TSEMA--EDIND-----------FVGGQECLDQRLY-------IPN  249 (304)
Q Consensus       216 ~~~----------------~~~~~----------~~~~s--~DV~S-----------~~~~~~~~~~~~~-------~~~  249 (304)
                      ...                ...++          ...++  +||||           .............       ...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~  241 (310)
T 3s95_A          162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD  241 (310)
T ss_dssp             ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred             cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence            221                11222          22223  89999           1111100000000       001


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ...+..++..+.+++.+||+     .||++|||+.++++.|+.+.....
T Consensus       242 ~~~~~~~~~~l~~li~~~l~-----~dP~~Rps~~~l~~~L~~l~~~~~  285 (310)
T 3s95_A          242 RYCPPNCPPSFFPITVRCCD-----LDPEKRPSFVKLEHWLETLRMHLA  285 (310)
T ss_dssp             HTCCTTCCTTHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCHHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHHhcc
Confidence            12244556779999999999     999999999999999999977543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.1e-37  Score=282.34  Aligned_cols=229  Identities=19%  Similarity=0.252  Sum_probs=179.3

Q ss_pred             HHhhccccccCCccccceeeecceee----cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV----SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||++.+.+.    ..++..||||+++......   .+..|+. ++.+ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            46789999999999999999987532    2356789999998654433   6667777 9999 899999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      +. +|+||||+++|+|.+++....               ..+++..++.++.|++.||+|||+.   +|+||||||+|||
T Consensus       160 ~~-~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl  235 (370)
T 2psq_A          160 GP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL  235 (370)
T ss_dssp             SS-CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             CC-EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence            54 499999999999999998753               2589999999999999999999765   8999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CCCCc---------ce-
Q 046594          195 LDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ---------EC-  240 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~-  240 (304)
                      ++.++.+||+|||+++.......    ....++          ...++  +||||        ...+.         ++ 
T Consensus       236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~  315 (370)
T 2psq_A          236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  315 (370)
T ss_dssp             ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred             ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            99999999999999987654322    111111          22233  99999        11011         11 


Q ss_pred             --eccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          241 --LDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       241 --~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                        +....   ....+..++..+.+++.+||+     .||++|||+.|++++|+++....++
T Consensus       316 ~~~~~~~---~~~~~~~~~~~l~~li~~~l~-----~dP~~Rpt~~ell~~L~~il~~~~~  368 (370)
T 2psq_A          316 KLLKEGH---RMDKPANCTNELYMMMRDCWH-----AVPSQRPTFKQLVEDLDRILTLTTN  368 (370)
T ss_dssp             HHHHTTC---CCCCCTTSCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHHhcCC---CCCCCCCCCHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHHhcc
Confidence              11111   234556677899999999999     9999999999999999999876554

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=6.4e-38  Score=284.62  Aligned_cols=222  Identities=20%  Similarity=0.202  Sum_probs=176.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.++   .+++.||||.++......   .+.+|+. +++++||||+++++++...+.. ++
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-~l  189 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLR---ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI-YI  189 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET---TTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC-EE
T ss_pred             HHeEEeeEeccCCCCeEEEEEEe---cCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc-EE
Confidence            46788899999999999999876   357899999987654332   6667777 9999999999999999887544 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++...+..+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++.....
T Consensus       190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            9999999999999987665799999999999999999999765   8999999999999999999999999999865443


Q ss_pred             CCCcc----ccc----------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHHH
Q 046594          216 SNRRN----CEK----------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       216 ~~~~~----~~~----------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      .....    .++          .+.++  +||||        +..+.            +.+....   +...+..++..
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  343 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG---RLPCPELCPDA  343 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC---CCCCCTTCCHH
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHH
Confidence            22110    001          22333  99999        11011            1112222   23455667788


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      +.+++.+||+     .||++|||+.++++.|+.+...
T Consensus       344 l~~li~~cl~-----~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          344 VFRLMEQCWA-----YEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcC-----CCchhCcCHHHHHHHHHHHHhh
Confidence            9999999999     9999999999999999998753

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.4e-37  Score=281.93  Aligned_cols=227  Identities=18%  Similarity=0.182  Sum_probs=172.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.++.....+..||||.++......   .+.+|+. +++++||||+++++++...+.. ++
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~l  123 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-MI  123 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC-EE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce-EE
Confidence            57999999999999999999876444467889999998654332   6777888 9999999999999999887544 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++...+..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence            9999999999999988766899999999999999999999765   8999999999999999999999999999876543


Q ss_pred             CC--Ccc---cc---c-------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHH
Q 046594          216 SN--RRN---CE---K-------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       216 ~~--~~~---~~---~-------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~  258 (304)
                      ..  ...   .+   +       ...++  +||||        ...+.            ..+....   ....+..++.
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~---~~~~~~~~~~  277 (373)
T 2qol_A          201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPA  277 (373)
T ss_dssp             -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTE---ECCCCTTCBH
T ss_pred             CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCccccH
Confidence            22  111   11   1       12233  89999        11011            1111222   2234456678


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      .+.+++.+||+     .||++||++.++++.|+++.+...
T Consensus       278 ~l~~li~~cl~-----~dp~~RPs~~~i~~~L~~~~~~~~  312 (373)
T 2qol_A          278 ALYQLMLDCWQ-----KDRNNRPKFEQIVSILDKLIRNPG  312 (373)
T ss_dssp             HHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHhC-----cChhhCcCHHHHHHHHHHHHhCcc
Confidence            89999999999     999999999999999999977544

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.8e-37  Score=268.48  Aligned_cols=221  Identities=23%  Similarity=0.273  Sum_probs=176.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.+.    ++..||+|++....... .+.+|+. +++++||||+++++++.+.+. .++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~lv   83 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-ICLV   83 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET----TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-EEEE
T ss_pred             hhhceeeheecCCCccEEEEEEec----CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc-eEEE
Confidence            357999999999999999999864    46789999998765433 7778888 999999999999999988754 4999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.......
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  160 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  160 (269)
T ss_dssp             EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence            999999999999987766899999999999999999999765   89999999999999999999999999998664432


Q ss_pred             C---Cccccc----------Ccccc--ccccc--------CCCCc---------ce---eccccCCCCCCcchHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND--------FVGGQ---------EC---LDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~---~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .   ....++          ...++  +||||        ...+.         +.   +....   ....+...+..+.
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  237 (269)
T 4hcu_A          161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVY  237 (269)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC---CCCCCTTSCHHHH
T ss_pred             cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCc---cCCCCCcCCHHHH
Confidence            1   111111          12233  89999        11011         11   11111   2334455678899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +++.+||+     .||++|||+.+++++|+++.+
T Consensus       238 ~li~~~l~-----~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          238 QIMNHCWR-----ERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHTC-----SSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcc-----CCcccCcCHHHHHHHHHHHHH
Confidence            99999999     999999999999999999876

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.2e-37  Score=277.78  Aligned_cols=217  Identities=21%  Similarity=0.213  Sum_probs=171.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+.   .+|+.||||++.......    .+.+|+. ++.++||||+++++++... ..+
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-~~~   89 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHI---LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE-KTL   89 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-SEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-CEE
Confidence            358999999999999999999875   457999999997643222    5667777 9999999999999999887 455


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++....
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           90 YLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             EEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             EEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            99999999999999998776 799999999999999999999765   89999999999999999999999999998765


Q ss_pred             CCCC-Cccccc-----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHH
Q 046594          214 GGSN-RRNCEK-----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       214 ~~~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .... ...+++           ..+.+  +||||              |....  +...... ......|...+..+.++
T Consensus       166 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~l  244 (328)
T 3fe3_A          166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL-RGKYRIPFYMSTDCENL  244 (328)
T ss_dssp             SSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHHHH
T ss_pred             CCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH-hCCCCCCCCCCHHHHHH
Confidence            5433 222333           11222  89999              22221  1111111 01123455567889999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||.     .||.+|||+.|+++|
T Consensus       245 i~~~L~-----~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          245 LKRFLV-----LNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHHHCC-----SSTTTSCCHHHHTTC
T ss_pred             HHHHCC-----CChhHCcCHHHHhcC
Confidence            999999     999999999999976

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.1e-37  Score=280.50  Aligned_cols=228  Identities=21%  Similarity=0.215  Sum_probs=178.5

Q ss_pred             HHhhccccccCCccccceeeeccee--ecCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRA--VSRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.+  ...+++.||||+++......   .+.+|+. ++++ +||||+++++++...+.
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~  100 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  100 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence            4689999999999999999998654  23467899999998654433   5677777 8888 88999999999988767


Q ss_pred             ceEEEEeecCCCChhhHhhhcCC---------------------------------------------------------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG---------------------------------------------------------  154 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------  154 (304)
                      .+++||||+++|+|.+++.....                                                         
T Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (359)
T 3vhe_A          101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  180 (359)
T ss_dssp             CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred             ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence            67999999999999999986532                                                         


Q ss_pred             --------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC----Ccccc
Q 046594          155 --------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN----RRNCE  222 (304)
Q Consensus       155 --------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~  222 (304)
                              .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......    ....+
T Consensus       181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  257 (359)
T 3vhe_A          181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL  257 (359)
T ss_dssp             ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred             cccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence                    289999999999999999999765   899999999999999999999999999987644332    11111


Q ss_pred             c----------Ccccc--ccccc--------CCCCc-------------ceeccccCCCCCCcchHHHHHHHHHHHHhcc
Q 046594          223 K----------TSEMA--EDIND--------FVGGQ-------------ECLDQRLYIPNEKFKITSLAKLGDIEKWCIS  269 (304)
Q Consensus       223 ~----------~~~~s--~DV~S--------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~  269 (304)
                      +          ...++  +||||        ...+.             ..+....   ....+...+..+.+++.+||+
T Consensus       258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~  334 (359)
T 3vhe_A          258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---RMRAPDYTTPEMYQTMLDCWH  334 (359)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC---CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHcc
Confidence            1          12223  89999        11011             0111111   234455567889999999999


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          270 CCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       270 ~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                           .||.+|||+.+++++|+.+.+..
T Consensus       335 -----~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          335 -----GEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             -----SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -----CChhhCCCHHHHHHHHHHHHHHh
Confidence                 99999999999999999997643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.5e-37  Score=270.67  Aligned_cols=229  Identities=17%  Similarity=0.188  Sum_probs=168.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.+......+..||+|.........   .+.+|+. +++++||||+++++++.+  +..+
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~   91 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NPVW   91 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSCE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc--CccE
Confidence            468999999999999999999887654556789999987644332   6777777 999999999999999854  3449


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++....
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  168 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence            99999999999999987766799999999999999999999765   899999999999999999999999999987654


Q ss_pred             CCC---Cccccc----------Ccccc--ccccc--------C----CCCc-----ceeccccCCCCCCcchHHHHHHHH
Q 046594          215 GSN---RRNCEK----------TSEMA--EDIND--------F----VGGQ-----ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       215 ~~~---~~~~~~----------~~~~s--~DV~S--------~----~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ...   ....++          ...++  +||||        .    .+..     +.............+...+..+.+
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~  248 (281)
T 1mp8_A          169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS  248 (281)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            332   111111          12223  89999        1    1111     111110000023455667788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      ++.+||+     .||++|||+.+++++|+++.+.+
T Consensus       249 li~~~l~-----~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          249 LMTKCWA-----YDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             HHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHcc-----CChhhCcCHHHHHHHHHHHHHHh
Confidence            9999999     99999999999999999997654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.1e-37  Score=272.30  Aligned_cols=215  Identities=20%  Similarity=0.209  Sum_probs=171.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .++|++.+.||+|+||.||++.+.   .+++.||+|++......  ..+.+|+. ++.++||||+++++++...+. +++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~-~~l   94 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDV---ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE-LWV   94 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBT---TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE-EEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEEC---CCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCE-EEE
Confidence            468999999999999999999875   45799999998754432  26677777 999999999999999988744 599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++...  .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++......
T Consensus        95 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A           95 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             EEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            99999999999999875  599999999999999999999765   8999999999999999999999999999876544


Q ss_pred             CC--Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ..  ....++          ...++  +||||              |....      .+.....  +....+...+..+.
T Consensus       170 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  247 (297)
T 3fxz_A          170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT--PELQNPEKLSAIFR  247 (297)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS--CCCSCGGGSCHHHH
T ss_pred             ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCccccCHHHH
Confidence            33  222333          22223  89999              21111      0000000  12334566778899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++.+||+     .||++|||+.|+++|
T Consensus       248 ~li~~~l~-----~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          248 DFLNRCLE-----MDVEKRGSAKELLQH  270 (297)
T ss_dssp             HHHHHHSC-----SSTTTSCCHHHHTTC
T ss_pred             HHHHHHcc-----CChhHCcCHHHHhhC
Confidence            99999999     999999999999975

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.1e-37  Score=273.30  Aligned_cols=227  Identities=21%  Similarity=0.213  Sum_probs=175.0

Q ss_pred             HHhhccccccCCccccceeeeccee-ecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCC-Cce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRA-VSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGL-QRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~~  133 (304)
                      .++|++.+.||+|+||.||++.+.. ...+++.||||++.......  .+.+|+. +++++||||+++++++...+ ..+
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            5789999999999999999998532 12467999999998655443  6777888 99999999999999986532 345


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++....
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~  165 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP  165 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence            999999999999999988765799999999999999999999764   89999999999999999999999999998765


Q ss_pred             CCCC-----Cccccc----------Ccccc--ccccc-----------CCCCc------------------------cee
Q 046594          214 GGSN-----RRNCEK----------TSEMA--EDIND-----------FVGGQ------------------------ECL  241 (304)
Q Consensus       214 ~~~~-----~~~~~~----------~~~~s--~DV~S-----------~~~~~------------------------~~~  241 (304)
                      ....     ....++          ...++  +||||           .....                        +.+
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (295)
T 3ugc_A          166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL  245 (295)
T ss_dssp             ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred             CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence            4322     111111          12233  89999           11110                        001


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      ....   ....+..++..+.+++.+||+     .||++|||+.++++.|+++.+.
T Consensus       246 ~~~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          246 KNNG---RLPRPDGCPDEIYMIMTECWN-----NNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HTTC---CCCCCTTCCHHHHHHHHHHSC-----SSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hccC---cCCCCcCcCHHHHHHHHHHcC-----CChhhCCCHHHHHHHHHHHHHh
Confidence            1111   234456677889999999999     9999999999999999998763

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=4.3e-37  Score=267.85  Aligned_cols=224  Identities=21%  Similarity=0.206  Sum_probs=174.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      .++|++.+.||+|+||.||++.+.    ++..||+|++...... ..+.+|+. +++++||||+++++++...+. +++|
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~lv   97 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-IFII   97 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET----TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-EEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc----CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCC-eEEE
Confidence            458999999999999999998764    4678999999876543 37777888 999999999999999988744 4999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++.......
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  174 (283)
T 3gen_A           98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  174 (283)
T ss_dssp             ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence            999999999999987555899999999999999999999765   89999999999999999999999999998664332


Q ss_pred             C---Cccccc----------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .   ....++          ...++  +||||        ...+.            ..+....   ....+...+..+.
T Consensus       175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~  251 (283)
T 3gen_A          175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLASEKVY  251 (283)
T ss_dssp             HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC---CCCCCTTCCHHHH
T ss_pred             cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhccc---CCCCCCcCCHHHH
Confidence            1   111111          12233  89999        11011            1111122   2334455568899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      +++.+||+     .||.+|||+.+++++|+.+.+.++
T Consensus       252 ~li~~~l~-----~~p~~Rps~~~ll~~L~~~~~~es  283 (283)
T 3gen_A          252 TIMYSCWH-----EKADERPTFKILLSNILDVMDEES  283 (283)
T ss_dssp             HHHHHTTC-----SSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHcc-----CChhHCcCHHHHHHHHHHHhhccC
Confidence            99999999     999999999999999999987553

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-37  Score=278.54  Aligned_cols=229  Identities=20%  Similarity=0.235  Sum_probs=179.8

Q ss_pred             HHhhccccccCCccccceeeecceeec----CCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS----RNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~----~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||++.+.+..    ..+..||||++.......   .+.+|+. ++++ +||||+++++++...
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            368999999999999999999875432    345689999998654433   5667777 8888 999999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      +.. ++||||+++|+|.+++....               ..+++..++.++.|++.||+|||+.   +|+||||||+|||
T Consensus       148 ~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  223 (382)
T 3tt0_A          148 GPL-YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL  223 (382)
T ss_dssp             SSC-EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             Cce-EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence            555 99999999999999998754               2599999999999999999999765   8999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC-------CCc-----
Q 046594          195 LDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV-------GGQ-----  238 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~-------~~~-----  238 (304)
                      ++.++.+||+|||+++.......    ....++          ...++  +||||        ..       ...     
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~  303 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF  303 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999999987654322    111111          22233  89999        11       111     


Q ss_pred             ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          239 ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                      ..+....   ....+..++..+.+++.+||+     .||++|||+.+++++|+++......
T Consensus       304 ~~~~~~~---~~~~~~~~~~~l~~li~~~l~-----~dP~~Rps~~ell~~L~~~~~~~~~  356 (382)
T 3tt0_A          304 KLLKEGH---RMDKPSNCTNELYMMMRDCWH-----AVPSQRPTFKQLVEDLDRIVALTSN  356 (382)
T ss_dssp             HHHHTTC---CCCCCSSCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred             HHHHcCC---CCCCCccCCHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHHHhc
Confidence            1111222   234455677889999999999     9999999999999999999876553

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=7.6e-37  Score=283.76  Aligned_cols=222  Identities=21%  Similarity=0.272  Sum_probs=176.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|++.+.||+|+||.||++.+.     ++.||||+++.......+.+|+. +++++||||+++++++...+..+++||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-----~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-----TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-----CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            356888999999999999998764     57999999987665557778888 999999999999999887766679999


Q ss_pred             eecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|.+++...+. .+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++......
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  343 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  343 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence            99999999999987654 479999999999999999999765   89999999999999999999999999998654332


Q ss_pred             CCc--cccc-------Ccccc--ccccc--------CCCCc---------ce---eccccCCCCCCcchHHHHHHHHHHH
Q 046594          217 NRR--NCEK-------TSEMA--EDIND--------FVGGQ---------EC---LDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       217 ~~~--~~~~-------~~~~s--~DV~S--------~~~~~---------~~---~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ...  +...       ...++  +||||        +..+.         ++   +....   +...+..++..+.+++.
T Consensus       344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~---~~~~p~~~~~~l~~li~  420 (450)
T 1k9a_A          344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---KMDAPDGCPPAVYDVMK  420 (450)
T ss_dssp             ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTC---CCCCCTTCCHHHHHHHH
T ss_pred             cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCcCCHHHHHHHH
Confidence            211  1111       23334  99999        11011         11   11122   33456677889999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      +||+     .||++|||+.++++.|+.+...
T Consensus       421 ~cl~-----~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          421 NCWH-----LDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHTC-----SSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHcC-----CChhHCcCHHHHHHHHHHHHHh
Confidence            9999     9999999999999999998754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.5e-36  Score=269.76  Aligned_cols=227  Identities=22%  Similarity=0.213  Sum_probs=173.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCC---ce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ---RR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~---~~  133 (304)
                      ..+|++.+.||+|+||.||++.+.     ++.||||++....... ..+.|+. +++++||||+++++++.....   .+
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   97 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-----NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL   97 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-----TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-----CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence            358999999999999999999764     5899999997655444 5566777 999999999999999877532   36


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc-------CCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY-------SKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~-------~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      ++||||+++|+|.+++...  .+++..++.++.|++.||+|||+.       |+++|+||||||+|||++.++.+||+||
T Consensus        98 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF  175 (322)
T 3soc_A           98 WLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF  175 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence            9999999999999999875  599999999999999999999653       3348999999999999999999999999


Q ss_pred             ccccccCCCCC----CcccccCc---------------ccc--ccccc--------------CCCCc-------------
Q 046594          207 GAANYCSGGSN----RRNCEKTS---------------EMA--EDIND--------------FVGGQ-------------  238 (304)
Q Consensus       207 gla~~~~~~~~----~~~~~~~~---------------~~s--~DV~S--------------~~~~~-------------  238 (304)
                      |+++.......    ....++..               .++  +||||              |....             
T Consensus       176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~  255 (322)
T 3soc_A          176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ  255 (322)
T ss_dssp             TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred             CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence            99987654332    11223311               222  69999              11110             


Q ss_pred             -----c----eeccccCCC-CCC-cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          239 -----E----CLDQRLYIP-NEK-FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       239 -----~----~~~~~~~~~-~~~-~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                           .    ......... ... .+...+..+.+++.+||+     .||++|||+.++++.|+++.+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~-----~dP~~Rps~~ell~~L~~l~~~~  320 (322)
T 3soc_A          256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD-----HDAEARLSAGCVGERITQMQRLT  320 (322)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHHHh
Confidence                 0    000111000 011 112456779999999999     99999999999999999998754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3.6e-37  Score=266.24  Aligned_cols=225  Identities=18%  Similarity=0.185  Sum_probs=175.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.++    ++..||+|++....... .+.+|+. +++++||||+++++++...+. .++|
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~lv   81 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK----GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP-IYIV   81 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-EEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEec----CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCc-eEEE
Confidence            368999999999999999998764    45789999998765433 6777887 999999999999999987744 4999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|.+++...+..+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++.......
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            999999999999988765799999999999999999999765   89999999999999999999999999998765543


Q ss_pred             C---Cccccc----------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .   ....++          ...++  +||||        ...+.         +.............+...+..+.+++
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  238 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIM  238 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred             hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHH
Confidence            3   112111          11222  89999        11011         01000000002233444567899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      .+||+     .||++|||+.+++++|+.+.+.
T Consensus       239 ~~~l~-----~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          239 YSCWH-----ELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHTTC-----SSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHHcC-----CChhhCcCHHHHHHHHHHhhhc
Confidence            99999     9999999999999999988653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=3e-37  Score=272.83  Aligned_cols=226  Identities=18%  Similarity=0.208  Sum_probs=168.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+     .++.||||++.......    .+.+|+. +++++||||+++++++...+.. 
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~-  109 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW-----HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL-  109 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC-
T ss_pred             hhHceeeeEeecCCCeEEEEEEE-----CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce-
Confidence            45899999999999999999975     36789999987654322    5667777 9999999999999999887555 


Q ss_pred             EEEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPP--IYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~--ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ++||||+++|+|.+++.....  .+++..++.++.|++.||+|||+.   +  |+||||||+|||++.++.+||+|||++
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a  186 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS  186 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence            999999999999999987642  499999999999999999999764   6  999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccc-cCCCCCCcchHHHH
Q 046594          210 NYCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQR-LYIPNEKFKITSLA  258 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~-~~~~~~~~~~~~~~  258 (304)
                      +.......  ....++          ....+  +||||              |....  +..... ........+...+.
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (309)
T 3p86_A          187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP  266 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCH
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCH
Confidence            76544322  112222          12222  89999              22111  111000 00113455667778


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      .+.+++.+||+     .||.+|||+.++++.|+.+.+...
T Consensus       267 ~l~~li~~~l~-----~dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          267 QVAAIIEGCWT-----NEPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             HHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHHhCC
Confidence            89999999999     999999999999999999876443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=3e-37  Score=279.21  Aligned_cols=231  Identities=21%  Similarity=0.194  Sum_probs=175.0

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+.+.  ...+..||||++.......   .+..|+. +++++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            46899999999999999999986542  2457899999997543332   5666777 9999999999999999887555


Q ss_pred             eEEEEeecCCCChhhHhhhcC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC---CeeE
Q 046594          133 RCLVFEFMQRGSLRWNLREKG------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC---NAKL  203 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~---~~kl  203 (304)
                       ++||||+++|+|.+++....      ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++   .+||
T Consensus       150 -~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL  225 (367)
T 3l9p_A          150 -FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI  225 (367)
T ss_dssp             -EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             -EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence             99999999999999998754      2589999999999999999999765   899999999999999555   5999


Q ss_pred             cccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC-------CCc--ceeccccCCCCC
Q 046594          204 AGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV-------GGQ--ECLDQRLYIPNE  250 (304)
Q Consensus       204 ~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~-------~~~--~~~~~~~~~~~~  250 (304)
                      +|||+++.......    ....++          ...++  +||||        ..       ...  ++..........
T Consensus       226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~  305 (367)
T 3l9p_A          226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM  305 (367)
T ss_dssp             CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred             CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            99999975422111    111111          22233  89999        11       111  111111100023


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+..++..+.+|+.+||+     .||++|||+.+++++|+.+.+..+
T Consensus       306 ~~~~~~~~~l~~li~~~l~-----~dP~~Rps~~eil~~l~~~~~~~~  348 (367)
T 3l9p_A          306 DPPKNCPGPVYRIMTQCWQ-----HQPEDRPNFAIILERIEYCTQDPD  348 (367)
T ss_dssp             CCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             CCCccCCHHHHHHHHHHcC-----CCHhHCcCHHHHHHHHHHHhhChh
Confidence            3455667889999999999     999999999999999999987654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=9.2e-37  Score=267.69  Aligned_cols=230  Identities=17%  Similarity=0.141  Sum_probs=174.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.+.........+|+|.+.......   .+.+|+. +++++||||+++++++...++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            46888999999999999999876443445679999988654433   6667777 9999999999999998766666699


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++.....
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccccc
Confidence            9999999999999987666899999999999999999999765   8999999999999999999999999999866443


Q ss_pred             CC------Cccccc----------Ccccc--ccccc------------CCCCc-----ceeccccCCCCCCcchHHHHHH
Q 046594          216 SN------RRNCEK----------TSEMA--EDIND------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~------~~~~~~----------~~~~s--~DV~S------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..      ....++          ...++  +||||            .+...     +.............+...+..+
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  261 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL  261 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHH
T ss_pred             chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHH
Confidence            21      111111          12223  89999            11111     1100000000223345566789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      .+++.+||+     .||++|||+.++++.|+++.+..
T Consensus       262 ~~li~~~l~-----~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          262 YEVMLKCWH-----PKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             HHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHhh
Confidence            999999999     99999999999999999987643

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.8e-36  Score=267.54  Aligned_cols=225  Identities=21%  Similarity=0.227  Sum_probs=176.5

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .++|++.+.||+|+||.||++.+....  .++..||+|++.......   .+.+|+. ++.++||||+++++++...+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            468999999999999999999864321  356899999998654333   6677888 9999999999999999887555


Q ss_pred             eEEEEeecCCCChhhHhhhcCC-----------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG-----------------------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT  189 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~-----------------------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlk  189 (304)
                       ++||||+++|+|.+++.....                       .+++..++.++.|++.||+|||+.   +++|||||
T Consensus       102 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik  177 (314)
T 2ivs_A          102 -LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA  177 (314)
T ss_dssp             -EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred             -EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence             999999999999999987532                       389999999999999999999765   89999999


Q ss_pred             CCCeeeCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC-------CCc
Q 046594          190 SDNILLDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV-------GGQ  238 (304)
Q Consensus       190 p~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~-------~~~  238 (304)
                      |+|||++.++.+||+|||++........    ....++          ...++  +||||        ..       ...
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999987654332    111111          12233  99999        11       100


Q ss_pred             --c---eeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          239 --E---CLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       239 --~---~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                        .   .+....   ....+...+..+.+++.+||+     .||++|||+.+++++|+++..
T Consensus       258 ~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~-----~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          258 PERLFNLLKTGH---RMERPDNCSEEMYRLMLQCWK-----QEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             GGGHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCC---cCCCCccCCHHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHh
Confidence              1   111111   234455677889999999999     999999999999999999865

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.7e-36  Score=269.33  Aligned_cols=222  Identities=14%  Similarity=0.137  Sum_probs=167.9

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCC-
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-  131 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~-  131 (304)
                      .+..+|++.+.||+|+||.||++.++   .+++.||||++......   ..+.+|+. +++++||||+++++++.+.+. 
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   79 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNK---VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPE   79 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEET---TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSC
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEc---CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccc
Confidence            35689999999999999999999876   46799999999754432   26777888 999999999999999865432 


Q ss_pred             -------------------------------------------------------ceEEEEeecCCCChhhHhhhcCC--
Q 046594          132 -------------------------------------------------------RRCLVFEFMQRGSLRWNLREKGG--  154 (304)
Q Consensus       132 -------------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~--  154 (304)
                                                                             .+++||||+++|+|.+++.....  
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~  159 (332)
T 3qd2_B           80 KWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLE  159 (332)
T ss_dssp             HHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGG
T ss_pred             hhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCcc
Confidence                                                                   26999999999999999987653  


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--------------Ccc
Q 046594          155 PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--------------RRN  220 (304)
Q Consensus       155 ~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--------------~~~  220 (304)
                      ..++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......              ...
T Consensus       160 ~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~  236 (332)
T 3qd2_B          160 DREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQ  236 (332)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSC
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccccccccccc
Confidence            467778999999999999999764   899999999999999999999999999987765421              111


Q ss_pred             ccc----------Ccccc--ccccc-----------CCCCc---ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCC
Q 046594          221 CEK----------TSEMA--EDIND-----------FVGGQ---ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNI  274 (304)
Q Consensus       221 ~~~----------~~~~s--~DV~S-----------~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~  274 (304)
                      .++          ...++  +||||           +.+..   ...................+.+.+++.+||+     
T Consensus       237 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-----  311 (332)
T 3qd2_B          237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLS-----  311 (332)
T ss_dssp             C-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHC-----
T ss_pred             CCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHcc-----
Confidence            222          22233  89999           21111   1111111000112224455778999999999     


Q ss_pred             CCCCCCCCHHHHHHH
Q 046594          275 EGNENHPKIVDVLSG  289 (304)
Q Consensus       275 ~dp~~Rps~~~vl~~  289 (304)
                      .||++|||+.|+++|
T Consensus       312 ~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          312 PSPTERPEATDIIEN  326 (332)
T ss_dssp             SSGGGSCCHHHHHHS
T ss_pred             CCCCcCCCHHHHhhc
Confidence            999999999999975

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7e-37  Score=277.35  Aligned_cols=229  Identities=17%  Similarity=0.145  Sum_probs=167.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +|++.+.||+|+||.||++.+......+..+|+|.++......   .+.+|+. +++++||||+++++++...++..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3667789999999999999876432234579999987543322   6777888 99999999999999987665666999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++|+|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  246 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  246 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccc
Confidence            999999999999987766799999999999999999999765   89999999999999999999999999998664332


Q ss_pred             C------Cccccc----------Ccccc--ccccc------------CCCCc-----ceeccccCCCCCCcchHHHHHHH
Q 046594          217 N------RRNCEK----------TSEMA--EDIND------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~------~~~~~~----------~~~~s--~DV~S------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .      ....++          ...++  +||||            .+...     +.............+..++..+.
T Consensus       247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  326 (373)
T 3c1x_A          247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY  326 (373)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence            1      111111          22233  99999            11111     11100000002233455678899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +++.+||+     .||++|||+.+++++|+.+....
T Consensus       327 ~li~~cl~-----~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          327 EVMLKCWH-----PKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             HHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHcC-----CChhhCcCHHHHHHHHHHHHHhc
Confidence            99999999     99999999999999999987643

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=7.8e-37  Score=273.23  Aligned_cols=232  Identities=21%  Similarity=0.238  Sum_probs=177.3

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+.+..  .+++.||||.++......   .+.+|+. +++++||||+++++++...+..
T Consensus        46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  125 (343)
T 1luf_A           46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM  125 (343)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence            568999999999999999999886432  345899999998654433   6778888 9999999999999999887554


Q ss_pred             eEEEEeecCCCChhhHhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 046594          133 RCLVFEFMQRGSLRWNLREKG-----------------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT  189 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlk  189 (304)
                       ++||||+++|+|.+++....                       ..+++..++.++.|++.||+|||+.   +|+|||||
T Consensus       126 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk  201 (343)
T 1luf_A          126 -CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA  201 (343)
T ss_dssp             -EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred             -EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence             99999999999999998742                       3799999999999999999999765   89999999


Q ss_pred             CCCeeeCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC----CCc---
Q 046594          190 SDNILLDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV----GGQ---  238 (304)
Q Consensus       190 p~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~----~~~---  238 (304)
                      |+|||++.++.+||+|||+++.......    ....++          ...++  +||||        ..    +..   
T Consensus       202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  281 (343)
T 1luf_A          202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA  281 (343)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence            9999999999999999999976533221    111111          12233  99999        11    111   


Q ss_pred             --ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          239 --ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       239 --~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                        ++............+..++..+.+++.+||+     .||++|||+.+++++|+++.+....
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~-----~~p~~Rps~~~~~~~L~~~~~~~~~  339 (343)
T 1luf_A          282 HEEVIYYVRDGNILACPENCPLELYNLMRLCWS-----KLPADRPSFCSIHRILQRMCERAEG  339 (343)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHTTC----
T ss_pred             hHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcc-----cCcccCCCHHHHHHHHHHHHhhhhh
Confidence              1111100000123455667889999999999     9999999999999999998765543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.7e-36  Score=267.60  Aligned_cols=231  Identities=22%  Similarity=0.230  Sum_probs=178.6

Q ss_pred             Hhh-ccccccCCccccceeeecceee-cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCC-CCc
Q 046594           60 KRR-RMLKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDG-LQR  132 (304)
Q Consensus        60 ~~~-~~~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~  132 (304)
                      +|| ++.+.||+|+||.||++.+++. ..+++.||||++.......   .+.+|+. +++++||||+++++++.+. ...
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence            355 9999999999999988866433 2367899999998754332   6777888 9999999999999999875 355


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++...  .+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++...
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  184 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV  184 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence            69999999999999999876  499999999999999999999765   8999999999999999999999999999877


Q ss_pred             CCCCC-----Cccccc----------Ccccc--ccccc---------C--CCCc-----------------------cee
Q 046594          213 SGGSN-----RRNCEK----------TSEMA--EDIND---------F--VGGQ-----------------------ECL  241 (304)
Q Consensus       213 ~~~~~-----~~~~~~----------~~~~s--~DV~S---------~--~~~~-----------------------~~~  241 (304)
                      .....     ....++          ...++  +||||         .  .+..                       +.+
T Consensus       185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (318)
T 3lxp_A          185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL  264 (318)
T ss_dssp             CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence            55432     111111          11222  89999         1  0000                       111


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcccccC
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSVLSM  303 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~~~~~  303 (304)
                      ....   ....+..++..+.+++.+||+     .||++|||+.++++.|+++.+...+..+|
T Consensus       265 ~~~~---~~~~~~~~~~~l~~li~~~l~-----~dP~~Rps~~ell~~L~~l~~~~~~~~ps  318 (318)
T 3lxp_A          265 ERGE---RLPRPDKCPAEVYHLMKNCWE-----TEASFRPTFENLIPILKTVHEKYQGQAPS  318 (318)
T ss_dssp             HTTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHHHC----
T ss_pred             hccc---CCCCCccccHHHHHHHHHHcC-----CCcccCcCHHHHHHHHHHHHHhhccCCCC
Confidence            1222   234456677889999999999     99999999999999999999877766554

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-36  Score=265.04  Aligned_cols=226  Identities=16%  Similarity=0.158  Sum_probs=176.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +|+..+.||+|+||.||++.+.....++..+|+|.+.......   .+.+|+. +++++||||+++++++...+...+++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            3555689999999999999876555555689999998654433   6667777 99999999999999998775655899


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+.+|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++......
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence            999999999999988666899999999999999999999765   89999999999999999999999999998654322


Q ss_pred             C------Cccccc----------Ccccc--ccccc------------CCCCc-----c---eeccccCCCCCCcchHHHH
Q 046594          217 N------RRNCEK----------TSEMA--EDIND------------FVGGQ-----E---CLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       217 ~------~~~~~~----------~~~~s--~DV~S------------~~~~~-----~---~~~~~~~~~~~~~~~~~~~  258 (304)
                      .      ....++          ...++  +||||            .+...     +   .+....   ....+...+.
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  255 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR---RLPQPEYCPD  255 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC---CCCCCTTCCH
T ss_pred             ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC---CCCCCccchH
Confidence            1      111111          22223  89999            11111     1   111111   2334455678


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      .+.+++.+||+     .||.+|||+.++++.|+++.+..
T Consensus       256 ~l~~li~~~l~-----~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          256 SLYQVMQQCWE-----ADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             HHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHHHH
Confidence            89999999999     99999999999999999987643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=6.4e-37  Score=272.72  Aligned_cols=226  Identities=16%  Similarity=0.139  Sum_probs=173.0

Q ss_pred             HHhhccccccCCccccceeeecceeecC-CCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+..... -...||+|.+......   ..+.+|+. +++++||||+++++++..+ .. 
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~-   91 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV-   91 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SE-
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-Ce-
Confidence            4689999999999999999998754321 1235789988654322   26777887 9999999999999999876 44 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++++||+++|+|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A           92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            899999999999999998776899999999999999999999765   89999999999999999999999999998765


Q ss_pred             CCCC----Cccccc----------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHH
Q 046594          214 GGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       214 ~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ....    ....++          ...++  +||||        ...+.            ..+....   ....+..++
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  245 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICT  245 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC---CCCCCTTBC
T ss_pred             CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC---CCCCCccCC
Confidence            4433    111111          22233  89999        11011            1111222   234556677


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      ..+.+++.+||+     .||++|||+.+++++|+++.+.+
T Consensus       246 ~~~~~li~~~l~-----~~p~~Rps~~ell~~l~~~~~~~  280 (327)
T 3poz_A          246 IDVYMIMVKCWM-----IDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HHHHHHHHHHTC-----SCGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HHHHHHHHHHcC-----CChhhCCCHHHHHHHHHHHHhhh
Confidence            889999999999     99999999999999999987644

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=8.8e-37  Score=272.87  Aligned_cols=217  Identities=19%  Similarity=0.176  Sum_probs=170.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .++|++.+.||+|+||.||++.+.   .+++.||+|++......     ..+.+|+. ++.++||||+++++++...+ .
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-~   83 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHY---KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT-D   83 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS-E
T ss_pred             cCCEEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-E
Confidence            358999999999999999999875   45789999998754222     26777888 99999999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+ +|+|.+++...+ .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||++...
T Consensus        84 ~~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           84 IVMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             EEEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             EEEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            59999999 679999888766 799999999999999999999876   8999999999999999999999999999876


Q ss_pred             CCCCC-Cccccc----------Ccc-cc--ccccc--------------CCCCc-ceeccccCCCCCCcchHHHHHHHHH
Q 046594          213 SGGSN-RRNCEK----------TSE-MA--EDIND--------------FVGGQ-ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       213 ~~~~~-~~~~~~----------~~~-~s--~DV~S--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ..... ...+++          ... .+  +||||              |.... ......+.......+...+..+.++
T Consensus       159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  238 (336)
T 3h4j_B          159 TDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSL  238 (336)
T ss_dssp             TTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHH
T ss_pred             cCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            55433 222232          111 12  89999              21111 1111111111234455667889999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||.     .||.+|||+.|+++|
T Consensus       239 i~~~L~-----~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          239 IRRMIV-----ADPMQRITIQEIRRD  259 (336)
T ss_dssp             HHTTSC-----SSGGGSCCHHHHTTC
T ss_pred             HHHHcC-----CChhHCcCHHHHHhC
Confidence            999999     999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.5e-36  Score=284.95  Aligned_cols=221  Identities=21%  Similarity=0.190  Sum_probs=177.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..|++.+.||+|+||.||++.++.   .+..||||.++..... ..+.+|+. +++++||||+++++++...+.. ++||
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~-~lv~  295 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF-YIIT  295 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGG---GTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC-EEEE
T ss_pred             HHceeeeEecCCCCeEEEEEEEcC---CCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE-EEEE
Confidence            468889999999999999998863   3689999999865433 37777887 9999999999999999887554 9999


Q ss_pred             eecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|.+++..... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT  372 (495)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred             EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence            99999999999987543 699999999999999999999765   89999999999999999999999999998775433


Q ss_pred             C---Cccccc----------Ccccc--ccccc--------CC----CCc--------ceeccccCCCCCCcchHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND--------FV----GGQ--------ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S--------~~----~~~--------~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .   ....++          ...++  +||||        ..    +..        +.+....   +...+..++..+.
T Consensus       373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~  449 (495)
T 1opk_A          373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY---RMERPEGCPEKVY  449 (495)
T ss_dssp             EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC---CCCCCTTCCHHHH
T ss_pred             eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHHH
Confidence            2   111111          12233  89999        11    111        1122222   3345667788999


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +|+.+||+     .||++|||+.++++.|+.+.+
T Consensus       450 ~li~~cl~-----~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          450 ELMRACWQ-----WNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             HHHHHHTC-----SSGGGSCCHHHHHHHHHTSCS
T ss_pred             HHHHHHcC-----cChhHCcCHHHHHHHHHHHHh
Confidence            99999999     999999999999999998754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=9.2e-37  Score=267.76  Aligned_cols=226  Identities=20%  Similarity=0.227  Sum_probs=172.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+.   ..+..||+|.+......     ..+.+|+. +++++||||+++++++... +.
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-~~   85 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDT---ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED-DC   85 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEET---TTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS-SE
T ss_pred             hccEEEEEEEccCCCEEEEEEEEC---CCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC-Ce
Confidence            468999999999999999999875   35789999998643322     16777888 9999999999999999887 44


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++...+ ++++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++...
T Consensus        86 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A           86 YYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred             EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence            599999999999999998776 799999999999999999999765   8999999999999999999999999999876


Q ss_pred             CCCCC---Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHH
Q 046594          213 SGGSN---RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       213 ~~~~~---~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~  257 (304)
                      .....   ....++          ...++  +||||              |....      ..+...........+.+.+
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (294)
T 4eqm_A          162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP  241 (294)
T ss_dssp             -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSC
T ss_pred             ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCC
Confidence            54332   111222          22222  89999              22211      1111111000112334556


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCC-CHHHHHHHHHHHHhhh
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHP-KIVDVLSGLKQVKQLF  297 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rp-s~~~vl~~L~~~~~~~  297 (304)
                      ..+.+++.+||+     .||.+|| ++.++.+.|+.+....
T Consensus       242 ~~l~~li~~~l~-----~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          242 QSLSNVILRATE-----KDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             HHHHHHHHHHSC-----SSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             HHHHHHHHHHhc-----CCHhHccccHHHHHHHHHHHHhhc
Confidence            889999999999     9999999 8999999999876543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.1e-37  Score=271.91  Aligned_cols=218  Identities=16%  Similarity=0.157  Sum_probs=171.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.+|+|.+....... .+.+|+. ++.++||||+++++++.+.+ .+++|
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-~~~lv   79 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVET---SSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESME-ELVMI   79 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-EEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEEC---CCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC-EEEEE
Confidence            468999999999999999999876   357899999997654433 6777888 99999999999999998874 55999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC--CCCeeEcccccccccCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE--LCNAKLAGFGAANYCSG  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~--~~~~kl~Dfgla~~~~~  214 (304)
                      |||+++|+|.+++......+++..++.++.|++.||+|||+.   ||+||||||+|||++.  ++.+||+|||++.....
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~  156 (321)
T 1tki_A           80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence            999999999999987765799999999999999999999765   8999999999999997  78999999999988765


Q ss_pred             CCC-Cccccc----------Ccccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHHHHH
Q 046594          215 GSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       215 ~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ... ....++          ...++  +||||              |....  +    +....... ........+..+.
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~  235 (321)
T 1tki_A          157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF-DEEAFKEISIEAM  235 (321)
T ss_dssp             TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC-CHHHHTTSCHHHH
T ss_pred             CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC-ChhhhccCCHHHH
Confidence            443 222222          22233  99999              21111  1    11111100 0111124567899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++.+||.     .||.+|||+.|+++|
T Consensus       236 ~li~~~L~-----~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          236 DFVDRLLV-----KERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHTTSC-----SSGGGSCCHHHHHHS
T ss_pred             HHHHHHcC-----CChhHCcCHHHHhcC
Confidence            99999999     999999999999985

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-36  Score=268.92  Aligned_cols=216  Identities=16%  Similarity=0.072  Sum_probs=164.2

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.||||++.......     .+.++.. .+..+||||+++++++.++ .
T Consensus        55 ~~~~y~~~~~LG~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~-~  130 (311)
T 3p1a_A           55 FQQSFQRLSRLGHGSYGEVFKVRSK---EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG-G  130 (311)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEET---TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-T
T ss_pred             hhhheeeeheeccCCCeEEEEEEEC---CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC-C
Confidence            3578999999999999999999876   467999999986543222     3334444 4444999999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+++||||+ +++|.+++...+..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++..
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~  206 (311)
T 3p1a_A          131 ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVE  206 (311)
T ss_dssp             EEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred             EEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeee
Confidence            559999999 6699999888776899999999999999999999765   899999999999999999999999999987


Q ss_pred             cCCCCC-CcccccC---------cccc--ccccc------------CCC-Cc----ceeccccCCCCCCcchHHHHHHHH
Q 046594          212 CSGGSN-RRNCEKT---------SEMA--EDIND------------FVG-GQ----ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       212 ~~~~~~-~~~~~~~---------~~~s--~DV~S------------~~~-~~----~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ...... ....++.         +.++  +||||            .+. ..    .+.....   ...++...+..+.+
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~  283 (311)
T 3p1a_A          207 LGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL---PPEFTAGLSSELRS  283 (311)
T ss_dssp             CC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCC---CHHHHTTSCHHHHH
T ss_pred             cccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCC---CcccccCCCHHHHH
Confidence            654433 2222321         1223  89999            111 11    1111111   22334456688999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||+     .||++|||+.++++|
T Consensus       284 li~~~L~-----~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          284 VLVMMLE-----PDPKLRATAEALLAL  305 (311)
T ss_dssp             HHHHHSC-----SSTTTSCCHHHHHTS
T ss_pred             HHHHHcC-----CChhhCcCHHHHHhC
Confidence            9999999     999999999999874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.3e-36  Score=266.66  Aligned_cols=228  Identities=23%  Similarity=0.235  Sum_probs=178.6

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.+.  ..+++.||+|.+.......   .+.+|+. ++++ +||||+++++++...+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            35899999999999999999986442  2456899999998654332   6777777 9999 99999999999988755


Q ss_pred             ceEEEEeecCCCChhhHhhhcCC-----------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG-----------------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      . ++||||+++|+|.+++.....                 .+++..++.++.|++.||+|||+.   +++||||||+|||
T Consensus       102 ~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  177 (313)
T 1t46_A          102 T-LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL  177 (313)
T ss_dssp             C-EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             c-EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence            5 999999999999999987542                 489999999999999999999765   8999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCCC----ccccc----------Ccccc--ccccc--------CCCCc------------
Q 046594          195 LDELCNAKLAGFGAANYCSGGSNR----RNCEK----------TSEMA--EDIND--------FVGGQ------------  238 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~~----~~~~~----------~~~~s--~DV~S--------~~~~~------------  238 (304)
                      ++.++.+||+|||++.........    ...++          ...++  +||||        ...+.            
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  257 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF  257 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence            999999999999999877554331    11111          12223  89999        11011            


Q ss_pred             -ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          239 -ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       239 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                       ..+....   ....+...+..+.+++.+||+     .||.+|||+.+++++|+++.+...
T Consensus       258 ~~~~~~~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          258 YKMIKEGF---RMLSPEHAPAEMYDIMKTCWD-----ADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             HHHHHHTC---CCCCCTTSCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             HHHhccCC---CCCCcccCCHHHHHHHHHHcC-----CCchhCcCHHHHHHHHHHHHHHhh
Confidence             1111222   223345567889999999999     999999999999999999876543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=2.2e-36  Score=263.28  Aligned_cols=227  Identities=19%  Similarity=0.188  Sum_probs=176.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.+......+..||+|.+.......   .+.+|+. ++.++||||+++++++.++ .. +
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~-~   88 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PT-W   88 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SC-E
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CC-E
Confidence            368999999999999999999876544455679999998654332   6777787 9999999999999998654 44 8


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++.....
T Consensus        89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED  165 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred             EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence            99999999999999988766799999999999999999999764   899999999999999999999999999987654


Q ss_pred             CCC---Cccccc----------Ccccc--ccccc--------CCCCc---------ce---eccccCCCCCCcchHHHHH
Q 046594          215 GSN---RRNCEK----------TSEMA--EDIND--------FVGGQ---------EC---LDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       215 ~~~---~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~---~~~~~~~~~~~~~~~~~~~  259 (304)
                      ...   ....++          ...++  +||||        ...+.         +.   +....   ....+...+..
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  242 (281)
T 3cc6_A          166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD---RLPKPDLCPPV  242 (281)
T ss_dssp             -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTC---CCCCCTTCCHH
T ss_pred             ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCC---CCCCCCCCCHH
Confidence            332   111111          12223  89999        11011         11   01111   12334456688


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      +.+++.+||+     .||++|||+.+++++|+.+.+.+.
T Consensus       243 l~~li~~~l~-----~~p~~Rps~~ell~~L~~~~~~~~  276 (281)
T 3cc6_A          243 LYTLMTRCWD-----YDPSDRPRFTELVCSLSDVYQMEK  276 (281)
T ss_dssp             HHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcc-----CCchhCcCHHHHHHHHHHHHHhhh
Confidence            9999999999     999999999999999999987654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=8.5e-37  Score=271.62  Aligned_cols=227  Identities=18%  Similarity=0.181  Sum_probs=172.2

Q ss_pred             HHhhccccccCCccccceeeecceeecC-CCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+..... -...||+|.+.......   .+.+|+. ++.++||||+++++++..  ...
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~   89 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG--SSL   89 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB--SSE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--Ccc
Confidence            3579999999999999999998764321 12248888876443222   5556666 999999999999999864  345


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++|+|.+++....+.+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        90 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           90 QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             EEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             EEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccC
Confidence            999999999999999987655899999999999999999999765   89999999999999999999999999998775


Q ss_pred             CCCC----Cccccc----------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHH
Q 046594          214 GGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       214 ~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ....    ....++          ...++  +||||        ...+.            ..+....   ....+..++
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  243 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE---RLAQPQICT  243 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTC---BCCCCTTBC
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCC---CCCCCCcCc
Confidence            4432    111111          12233  89999        11011            1111111   233444566


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+.+++.+||.     .||.+|||+.+++++|+++...+.
T Consensus       244 ~~~~~li~~~l~-----~dp~~Rps~~el~~~l~~~~~~~~  279 (325)
T 3kex_A          244 IDVYMVMVKCWM-----IDENIRPTFKELANEFTRMARDPP  279 (325)
T ss_dssp             TTTTHHHHHHTC-----SCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred             HHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHhcch
Confidence            778899999999     999999999999999999976543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.5e-36  Score=272.50  Aligned_cols=217  Identities=19%  Similarity=0.197  Sum_probs=170.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--------hHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--------TKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.+|+|.+......        ..+.+|+. ++.++||||+++++++.+.
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~   87 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREK---STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR   87 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             hhceEEeeEEeeCcCEEEEEEEEC---CCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC
Confidence            457999999999999999999886   35799999999764332        36777888 9999999999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC----CeeEcc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC----NAKLAG  205 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~----~~kl~D  205 (304)
                       ..+++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++    .+||+|
T Consensus        88 -~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D  162 (361)
T 2yab_A           88 -TDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID  162 (361)
T ss_dssp             -SEEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred             -CEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence             45599999999999999998765 799999999999999999999765   899999999999998776    799999


Q ss_pred             cccccccCCCCC-CcccccCc----------ccc--ccccc--------------CCCCc--ceeccccCCCCCCcc---
Q 046594          206 FGAANYCSGGSN-RRNCEKTS----------EMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFK---  253 (304)
Q Consensus       206 fgla~~~~~~~~-~~~~~~~~----------~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~---  253 (304)
                      ||++........ ....++..          .++  +||||              |....  +...... .....++   
T Consensus       163 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~-~~~~~~~~~~  241 (361)
T 2yab_A          163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT-AVSYDFDEEF  241 (361)
T ss_dssp             CSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH-TTCCCCCHHH
T ss_pred             cCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcCCCCCchh
Confidence            999988765443 33333322          223  89999              21111  1111111 0011222   


Q ss_pred             -hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 -ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 -~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                       ...+..+.+++.+||.     .||.+|||+.|+++|
T Consensus       242 ~~~~s~~~~~li~~~L~-----~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          242 FSQTSELAKDFIRKLLV-----KETRKRLTIQEALRH  273 (361)
T ss_dssp             HTTSCHHHHHHHHHHSC-----SSTTTSCCHHHHHTS
T ss_pred             ccCCCHHHHHHHHHHCC-----CChhHCcCHHHHhcC
Confidence             3456789999999999     999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=3.8e-36  Score=264.15  Aligned_cols=225  Identities=17%  Similarity=0.206  Sum_probs=173.4

Q ss_pred             HHhhccccccCCccccceeeeccee-ecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCC-Cc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRA-VSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGL-QR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~  132 (304)
                      .++|++.+.||+|+||.||++.+.. ...+++.||+|++......   ..+.+|+. ++.++||||+++++++...+ ..
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence            4578999999999999999998532 1246899999999765432   26777888 99999999999999988753 34


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++...
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  176 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI  176 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccc
Confidence            6999999999999999977666899999999999999999999765   8999999999999999999999999999877


Q ss_pred             CCCCC-----Cccccc----------Ccccc--ccccc---------C--CCC---------------c--------cee
Q 046594          213 SGGSN-----RRNCEK----------TSEMA--EDIND---------F--VGG---------------Q--------ECL  241 (304)
Q Consensus       213 ~~~~~-----~~~~~~----------~~~~s--~DV~S---------~--~~~---------------~--------~~~  241 (304)
                      .....     ....++          ...++  +||||         .  .+.               .        ..+
T Consensus       177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (302)
T 4e5w_A          177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL  256 (302)
T ss_dssp             CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred             cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence            55432     111111          11222  89999         1  000               0        011


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      ....   ....+...+..+.+++.+||+     .||.+|||+.++++.|+++.
T Consensus       257 ~~~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          257 KEGK---RLPCPPNCPDEVYQLMRKCWE-----FQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HTTC---CCCCCTTCCHHHHHHHHHTTC-----SSGGGSCCHHHHHHHHHHHH
T ss_pred             hccC---CCCCCCCCCHHHHHHHHHHcC-----CCCCCCCCHHHHHHHHHHHh
Confidence            1111   233455667889999999999     99999999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.1e-36  Score=265.19  Aligned_cols=226  Identities=18%  Similarity=0.179  Sum_probs=170.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .++|++.+.||+|+||.||++.+.     ++.||+|.+........+.+|+. +++++||||+++++++.+.   .++||
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---~~lv~   78 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR-----AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVM   78 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET-----TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTT---TEEEE
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC-----CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---cEEEE
Confidence            368999999999999999998764     57899999986655557778888 9999999999999998743   49999


Q ss_pred             eecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC-eeEcccccccccCC
Q 046594          138 EFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN-AKLAGFGAANYCSG  214 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~-~kl~Dfgla~~~~~  214 (304)
                      ||+++|+|.+++.....  .+++..++.++.|+++||+|||+.+.++++||||||+|||++.++. +||+|||++.....
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~  158 (307)
T 2eva_A           79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT  158 (307)
T ss_dssp             ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred             EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence            99999999999987653  5789999999999999999999876679999999999999998886 79999999976543


Q ss_pred             CCC--Cccccc-------Ccccc--ccccc--------------CCCCc----ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          215 GSN--RRNCEK-------TSEMA--EDIND--------------FVGGQ----ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       215 ~~~--~~~~~~-------~~~~s--~DV~S--------------~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                      ...  ..+..+       ...++  +||||              |....    ..............+...+..+.+++.
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  238 (307)
T 2eva_A          159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT  238 (307)
T ss_dssp             ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHH
T ss_pred             ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHH
Confidence            322  111111       22233  99999              21110    000000000023344566788999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +||+     .||++|||+.+++++|+.+.+..
T Consensus       239 ~~l~-----~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          239 RCWS-----KDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             HHTC-----SSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             HHhc-----CChhhCcCHHHHHHHHHHHHHhc
Confidence            9999     99999999999999999987643

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.9e-36  Score=273.32  Aligned_cols=214  Identities=18%  Similarity=0.193  Sum_probs=161.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+|++.+.||+|+||.||++.++   .+++.||||++...... ..+.+|+. ++.++||||+++++++... ..+++||
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~lv~   95 (361)
T 3uc3_A           20 DRYDFVKDIGSGNFGVARLMRDK---LTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP-THLAIIM   95 (361)
T ss_dssp             TTEEEEEEESSSTTSSEEEEEET---TTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECS-SEEEEEE
T ss_pred             CcEEEEEEeccCCCEEEEEEEEC---CCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeC-CEEEEEE
Confidence            58999999999999999999886   35789999999765433 36777777 9999999999999999887 4559999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC--eeEcccccccccCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN--AKLAGFGAANYCSGG  215 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~--~kl~Dfgla~~~~~~  215 (304)
                      ||+++|+|.+++...+ .+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.  +||+|||+++.....
T Consensus        96 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A           96 EYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred             EeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence            9999999999998766 799999999999999999999764   8999999999999987765  999999999754332


Q ss_pred             CC-Cccccc----------Cccc-c--ccccc--------------CCCCc------c----eeccccCCCCCCcchHHH
Q 046594          216 SN-RRNCEK----------TSEM-A--EDIND--------------FVGGQ------E----CLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       216 ~~-~~~~~~----------~~~~-s--~DV~S--------------~~~~~------~----~~~~~~~~~~~~~~~~~~  257 (304)
                      .. ....++          ...+ +  +||||              |....      .    +.....   ........+
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s  248 (361)
T 3uc3_A          172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY---SIPDDIRIS  248 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC---CCCTTSCCC
T ss_pred             CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC---CCCCcCCCC
Confidence            22 222222          1111 2  79999              21111      1    111111   111112356


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+|+.+||.     .||++|||+.|+++|
T Consensus       249 ~~~~~li~~~L~-----~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          249 PECCHLISRIFV-----ADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHHHHHHHSC-----SCTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHcc-----CChhHCcCHHHHHhC
Confidence            789999999999     999999999999986

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=6.9e-36  Score=260.75  Aligned_cols=219  Identities=23%  Similarity=0.343  Sum_probs=171.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---------hHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---------TKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---------~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      .+|++.+.||+|+||.||++.+.   .+++.||+|++......         ..+.+|+. +++++||||+++++++.+.
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLV---KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP   95 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEET---TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred             ccceehhccccCCceeEEEEEEc---CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence            58999999999999999999875   45799999998654322         25667777 9999999999999998765


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC-----eeEc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN-----AKLA  204 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~-----~kl~  204 (304)
                      .   ++||||+++|+|.+.+......+++..++.++.|++.||+|||+. ..+++||||||+|||++.++.     +||+
T Consensus        96 ~---~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~  171 (287)
T 4f0f_A           96 P---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVA  171 (287)
T ss_dssp             T---EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred             C---eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence            3   799999999999999887766899999999999999999999764 122999999999999988776     9999


Q ss_pred             ccccccccCCCCC--Cccccc---------Ccccc--ccccc--------------CCCCc--------ceeccccCCCC
Q 046594          205 GFGAANYCSGGSN--RRNCEK---------TSEMA--EDIND--------------FVGGQ--------ECLDQRLYIPN  249 (304)
Q Consensus       205 Dfgla~~~~~~~~--~~~~~~---------~~~~s--~DV~S--------------~~~~~--------~~~~~~~~~~~  249 (304)
                      |||+++.......  ..+..+         ...++  +||||              |....        .......   .
T Consensus       172 Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~  248 (287)
T 4f0f_A          172 DFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL---R  248 (287)
T ss_dssp             CCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC---C
T ss_pred             CCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC---C
Confidence            9999986544322  111111         12223  89999              21111        1112222   3


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ...+...+..+.+++.+||+     .||++|||+.++++.|+++
T Consensus       249 ~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          249 PTIPEDCPPRLRNVIELCWS-----GDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CCCCTTSCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHTC
T ss_pred             CCCCcccCHHHHHHHHHHhc-----CChhhCcCHHHHHHHHHhC
Confidence            45566778899999999999     9999999999999999864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=7.6e-36  Score=276.22  Aligned_cols=219  Identities=16%  Similarity=0.089  Sum_probs=170.2

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCC
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      .+..+|++.+.||+|+||.||++.++   .+|+.+|+|++.......    .+.+|+. ++.++||||+++++++.+.+ 
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-   83 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKV---LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG-   83 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEET---TTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEEC---CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-
Confidence            45789999999999999999999876   457999999997654322    6777888 99999999999999998874 


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC---CCCCeeEccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD---ELCNAKLAGFGA  208 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~---~~~~~kl~Dfgl  208 (304)
                      ..++||||+++|+|.+.+...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++   .++.+||+|||+
T Consensus        84 ~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~  159 (444)
T 3soa_A           84 HHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGL  159 (444)
T ss_dssp             EEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred             EEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCce
Confidence            4599999999999999998876 799999999999999999999765   899999999999998   467899999999


Q ss_pred             ccccCCCCC--CcccccCc----------ccc--ccccc--------------CCCCc------ceeccccCCCCCCcch
Q 046594          209 ANYCSGGSN--RRNCEKTS----------EMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKI  254 (304)
Q Consensus       209 a~~~~~~~~--~~~~~~~~----------~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~  254 (304)
                      +........  ....++..          .++  +||||              |....      .+....... ......
T Consensus       160 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~  238 (444)
T 3soa_A          160 AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF-PSPEWD  238 (444)
T ss_dssp             CBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC-CTTTTT
T ss_pred             eEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCC-Cccccc
Confidence            987765433  22333322          233  89999              21111      111111100 111223


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+..+.+++.+||+     .||.+|||+.|+++|
T Consensus       239 ~~s~~~~~li~~~L~-----~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          239 TVTPEAKDLINKMLT-----INPSKRITAAEALKH  268 (444)
T ss_dssp             TSCHHHHHHHHHHSC-----SSTTTSCCHHHHHHS
T ss_pred             cCCHHHHHHHHHHcC-----CChhHCCCHHHHhcC
Confidence            456889999999999     999999999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.8e-36  Score=267.68  Aligned_cols=217  Identities=19%  Similarity=0.180  Sum_probs=169.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--------hhHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--------QTKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||+|.+.....        ...+.+|+. ++.++||||+++++++...
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   86 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREK---STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   86 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEET---TTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             ccceEeceEEeeCCCeEEEEEEEC---CCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            568999999999999999999876   3578999999875432        236777888 9999999999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC----CeeEcc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC----NAKLAG  205 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~----~~kl~D  205 (304)
                      + .+++||||+++|+|.+++.... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++    .+||+|
T Consensus        87 ~-~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D  161 (326)
T 2y0a_A           87 T-DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID  161 (326)
T ss_dssp             S-EEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred             C-EEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence            4 4599999999999999998765 799999999999999999999765   899999999999999887    899999


Q ss_pred             cccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc--ceec----cccCCCCCCc
Q 046594          206 FGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLD----QRLYIPNEKF  252 (304)
Q Consensus       206 fgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~----~~~~~~~~~~  252 (304)
                      ||+++....... ....++          ...++  +||||              |....  +...    .... .....
T Consensus       162 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~  240 (326)
T 2y0a_A          162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE-FEDEY  240 (326)
T ss_dssp             CTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCC-CCHHH
T ss_pred             CCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCC-cCccc
Confidence            999987754333 222233          12233  89999              21111  1111    1110 01112


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ....+..+.+++.+||.     .||++|||+.++++|
T Consensus       241 ~~~~~~~~~~li~~~L~-----~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          241 FSNTSALAKDFIRRLLV-----KDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HTTSCHHHHHHHHHHSC-----SSGGGSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHcc-----CChhhCCCHHHHhcC
Confidence            23456789999999999     999999999999985

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2e-36  Score=261.91  Aligned_cols=219  Identities=21%  Similarity=0.219  Sum_probs=161.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch------hHHHHHHH-hhCCCCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ------TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.     +..+|||++......      ..+.+|.. ++.++||||+++++++...+.
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-----GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN   80 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-----TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-----CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence            357999999999999999999864     688999998754322      26677777 999999999999999988755


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC--------CCCeeE
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE--------LCNAKL  203 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~--------~~~~kl  203 (304)
                      . ++||||+++++|.+++...  .+++..++.++.|++.||+|||+....+++||||||+|||++.        ++.+||
T Consensus        81 ~-~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl  157 (271)
T 3dtc_A           81 L-CLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI  157 (271)
T ss_dssp             C-EEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred             e-EEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence            4 9999999999999998644  6999999999999999999998753334999999999999986        678999


Q ss_pred             cccccccccCCCCCCccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCC
Q 046594          204 AGFGAANYCSGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEK  251 (304)
Q Consensus       204 ~Dfgla~~~~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~  251 (304)
                      +|||++............++          ...++  +||||              |....      .......   ...
T Consensus       158 ~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~  234 (271)
T 3dtc_A          158 TDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL---ALP  234 (271)
T ss_dssp             CCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCC---CCC
T ss_pred             ccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCC---CCC
Confidence            99999987654433222222          12223  89999              22111      1111222   234


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+...+..+.+++.+||+     .||.+|||+.|++++|+++
T Consensus       235 ~~~~~~~~~~~li~~~l~-----~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          235 IPSTCPEPFAKLMEDCWN-----PDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHC-
T ss_pred             CCcccCHHHHHHHHHHhc-----CCcccCcCHHHHHHHHhcC
Confidence            556677889999999999     9999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=4.4e-36  Score=261.95  Aligned_cols=224  Identities=20%  Similarity=0.175  Sum_probs=179.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.++.   .+..||+|.+....... .+.+|+. ++.++||||+++++++...+. +++|
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~~v   87 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-FYII   87 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGG---GTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-EEEE
T ss_pred             ccceeEEeecCCCCceeEEEeEecC---CCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC-EEEE
Confidence            4578999999999999999998863   46899999998765443 6777888 999999999999999988744 4999


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++..... .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++......
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  164 (288)
T 3kfa_A           88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  164 (288)
T ss_dssp             EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred             EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence            999999999999987543 699999999999999999999876   8999999999999999999999999999877654


Q ss_pred             CC---Cccccc----------Ccccc--ccccc--------CC----CC---c-----ceeccccCCCCCCcchHHHHHH
Q 046594          216 SN---RRNCEK----------TSEMA--EDIND--------FV----GG---Q-----ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~---~~~~~~----------~~~~s--~DV~S--------~~----~~---~-----~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..   ....++          ...++  +||||        ..    +.   .     +.+....   ....+...+..+
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l  241 (288)
T 3kfa_A          165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY---RMERPEGCPEKV  241 (288)
T ss_dssp             SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC---CCCCCTTCCHHH
T ss_pred             ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccC---CCCCCCCCCHHH
Confidence            33   111111          12223  89999        11    11   1     1122222   334556667889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      .+++.+||.     .||.+|||+.++++.|+.+.+..
T Consensus       242 ~~li~~~l~-----~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          242 YELMRACWQ-----WNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             HHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhC-----CChhhCcCHHHHHHHHHHHHHhc
Confidence            999999999     99999999999999999887643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.7e-36  Score=271.17  Aligned_cols=217  Identities=17%  Similarity=0.199  Sum_probs=170.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||+|+++....     ...+.+|.. ++.++||||+++++++... ..
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-~~   79 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREK---ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-DR   79 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-SE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC-CE
Confidence            368999999999999999999876   4579999999975421     125666777 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        80 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A           80 LCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            599999999999999998766 799999999999999999999765   8999999999999999999999999999864


Q ss_pred             CCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ...+++          ...++  +||||              |....  ....... .....+|...+..+.+
T Consensus       156 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~  234 (337)
T 1o6l_A          156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-MEEIRFPRTLSPEAKS  234 (337)
T ss_dssp             CCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHHH
T ss_pred             ccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHH
Confidence            33221  222333          12223  89999              21111  1111110 0122455667788999


Q ss_pred             HHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      ++.+||+     .||++||     ++.++++|
T Consensus       235 li~~lL~-----~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          235 LLAGLLK-----KDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHTC-----SSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHhh-----cCHHHhcCCCCCCHHHHHcC
Confidence            9999999     9999999     89999886

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.4e-37  Score=269.13  Aligned_cols=231  Identities=18%  Similarity=0.152  Sum_probs=173.7

Q ss_pred             HHhhccccccCCccccceeeecceeecC----CCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSR----NLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++.+..    .+..||+|.+.......  .+.+|+. +++++||||+++++++...+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            4689999999999999999998875421    12579999987654332  6777887 999999999999999988755


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC--------eeE
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN--------AKL  203 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~--------~kl  203 (304)
                      . ++||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.        +||
T Consensus        87 ~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           87 N-ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             C-EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             C-EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeee
Confidence            5 999999999999999988765699999999999999999999765   8999999999999998887        999


Q ss_pred             cccccccccCCCCC-Cccccc-------C-cccc--ccccc---------C---CCCcce---eccccCCCCCCcchHHH
Q 046594          204 AGFGAANYCSGGSN-RRNCEK-------T-SEMA--EDIND---------F---VGGQEC---LDQRLYIPNEKFKITSL  257 (304)
Q Consensus       204 ~Dfgla~~~~~~~~-~~~~~~-------~-~~~s--~DV~S---------~---~~~~~~---~~~~~~~~~~~~~~~~~  257 (304)
                      +|||++........ ..+..+       . ..++  +||||         .   +.....   ............+...+
T Consensus       163 ~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (289)
T 4fvq_A          163 SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKA  242 (289)
T ss_dssp             CCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSS
T ss_pred             ccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCC
Confidence            99999976643322 111111       1 3344  99999         1   111100   00000000123334445


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+.+++.+||+     .||++|||+.+++++|+++.....
T Consensus       243 ~~l~~li~~~l~-----~dp~~Rps~~~ll~~l~~l~~p~~  278 (289)
T 4fvq_A          243 AELANLINNCMD-----YEPDHRPSFRAIIRDLNSLFTPDL  278 (289)
T ss_dssp             CTTHHHHHHHSC-----SSGGGSCCHHHHHHHHHTCC----
T ss_pred             HHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHhcCCCC
Confidence            678899999999     999999999999999999876443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.2e-36  Score=270.65  Aligned_cols=215  Identities=18%  Similarity=0.180  Sum_probs=167.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||||++......   ..+.+|+. ++.++||||+++++++.+++ ..+
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-~~~   81 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-IQY   81 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-EEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEEC---CCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-eEE
Confidence            568999999999999999999876   35789999998754432   26677777 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++.... .+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++....
T Consensus        82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  157 (323)
T 3tki_A           82 LFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (323)
T ss_dssp             EEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             EEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence            9999999999999998765 799999999999999999999764   899999999999999999999999999986532


Q ss_pred             CCC----Cccccc----------C-cccc--ccccc--------------CCCCcc-------eeccccCCCCCCcchHH
Q 046594          215 GSN----RRNCEK----------T-SEMA--EDIND--------------FVGGQE-------CLDQRLYIPNEKFKITS  256 (304)
Q Consensus       215 ~~~----~~~~~~----------~-~~~s--~DV~S--------------~~~~~~-------~~~~~~~~~~~~~~~~~  256 (304)
                      ...    ....++          . ...+  +||||              |.....       ......   ........
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~  234 (323)
T 3tki_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT---YLNPWKKI  234 (323)
T ss_dssp             TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT---TSTTGGGS
T ss_pred             CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc---cCCccccC
Confidence            221    112222          1 2223  89999              211110       011111   11222456


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..+.+++.+||+     .||++|||+.|++++
T Consensus       235 ~~~~~~li~~~L~-----~dP~~R~t~~eil~h  262 (323)
T 3tki_A          235 DSAPLALLHKILV-----ENPSARITIPDIKKD  262 (323)
T ss_dssp             CHHHHHHHHHHSC-----SSTTTSCCHHHHTTC
T ss_pred             CHHHHHHHHHHcc-----CChhhCcCHHHHhhC
Confidence            6888999999999     999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.2e-36  Score=259.14  Aligned_cols=221  Identities=22%  Similarity=0.259  Sum_probs=175.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.+.    ++..||+|.+...... ..+.+|+. +++++||||+++++++...+.. ++|
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~lv   81 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-CLV   81 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC-EEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec----CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCe-EEE
Confidence            357999999999999999998874    4678999999876543 37777888 9999999999999999887554 999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      |||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.......
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  158 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  158 (267)
T ss_dssp             ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc
Confidence            999999999999988766799999999999999999999765   89999999999999999999999999998764322


Q ss_pred             C---Cccccc----------Ccccc--ccccc--------CCCCc---------ce---eccccCCCCCCcchHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND--------FVGGQ---------EC---LDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~---~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .   ....++          ...++  +||||        ...+.         +.   +....   ....+...+..+.
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~  235 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVY  235 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC---CCCCCTTSCHHHH
T ss_pred             ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC---cCCCCccCcHHHH
Confidence            1   111111          12233  99999        11011         11   11111   2233445678899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +++.+||+     .||++|||+.+++++|+++.+
T Consensus       236 ~li~~~l~-----~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          236 QIMNHCWR-----ERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHHHTC-----SSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcc-----CChhhCcCHHHHHHHHHHHHh
Confidence            99999999     999999999999999999875

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.8e-36  Score=268.74  Aligned_cols=215  Identities=20%  Similarity=0.192  Sum_probs=171.3

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----------hhHHHHHHH-hhCCCCCcccceeee
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----------QTKLEEEIL-LKSSSHLNIVTLLGY  125 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~-l~~l~h~niv~~~~~  125 (304)
                      .+..+|++.+.||+|+||.||++.++   .+++.||||++.....          ...+..|+. +++++||||++++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~   97 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDK---EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDI   97 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEET---TTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccccceEEEeEEEecCCEEEEEEEEC---CCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            35689999999999999999999875   4579999999986531          114556777 999999999999999


Q ss_pred             eeCCCCceEEEEeecCCC-ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          126 PQDGLQRRCLVFEFMQRG-SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       126 ~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      +.+. ..+++||||+.+| +|.+++.... .+++..++.++.|++.||+|||..   +|+||||||+|||++.++.+||+
T Consensus        98 ~~~~-~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~  172 (335)
T 3dls_A           98 FENQ-GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLI  172 (335)
T ss_dssp             EECS-SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEEC
T ss_pred             EeeC-CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEe
Confidence            9887 4559999999777 9999998776 799999999999999999999765   89999999999999999999999


Q ss_pred             ccccccccCCCCC-Cccccc----------Cccc-c--ccccc--------------CCCCcceeccccCCCCCCcchHH
Q 046594          205 GFGAANYCSGGSN-RRNCEK----------TSEM-A--EDIND--------------FVGGQECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       205 Dfgla~~~~~~~~-~~~~~~----------~~~~-s--~DV~S--------------~~~~~~~~~~~~~~~~~~~~~~~  256 (304)
                      |||++........ ....++          ...+ +  +||||              |....+......     ..+...
T Consensus       173 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-----~~~~~~  247 (335)
T 3dls_A          173 DFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAI-----HPPYLV  247 (335)
T ss_dssp             CCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCC-----CCSSCC
T ss_pred             ecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhcc-----CCCccc
Confidence            9999987765443 222222          1111 3  79999              222222222222     233445


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..+.+++.+||+     .||++|||+.+++++
T Consensus       248 ~~~l~~li~~~L~-----~dP~~Rps~~ell~h  275 (335)
T 3dls_A          248 SKELMSLVSGLLQ-----PVPERRTTLEKLVTD  275 (335)
T ss_dssp             CHHHHHHHHHHTC-----SSGGGSCCHHHHHHC
T ss_pred             CHHHHHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            6789999999999     999999999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2.7e-36  Score=266.64  Aligned_cols=229  Identities=21%  Similarity=0.216  Sum_probs=178.5

Q ss_pred             HHhhccccccCCccccceeeeccee--ecCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRA--VSRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.+  ...+++.||||.+.......   .+.+|+. ++++ +||||+++++++...+.
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            4689999999999999999998654  23467899999998654433   5667777 8888 79999999999988766


Q ss_pred             ceEEEEeecCCCChhhHhhhcCC---------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG---------------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD  196 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~  196 (304)
                      .+++||||+++|+|.+++.....               .+++..++.++.|++.||+|||+.   +++||||||+|||++
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~  182 (316)
T 2xir_A          106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS  182 (316)
T ss_dssp             CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred             ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence            67999999999999999987653               289999999999999999999765   899999999999999


Q ss_pred             CCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CCCCc-------------c
Q 046594          197 ELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ-------------E  239 (304)
Q Consensus       197 ~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~-------------~  239 (304)
                      .++.+||+|||+++.......    ....++          ...++  +||||        ...+.             .
T Consensus       183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~  262 (316)
T 2xir_A          183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  262 (316)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred             CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHH
Confidence            999999999999987654332    111111          12223  89999        11011             0


Q ss_pred             eeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          240 CLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      .+....   ....+...+..+.+++.+||+     .||.+|||+.+++++|+.+.+...
T Consensus       263 ~~~~~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~ell~~L~~~~~~~~  313 (316)
T 2xir_A          263 RLKEGT---RMRAPDYTTPEMYQTMLDCWH-----GEPSQRPTFSELVEHLGNLLQANA  313 (316)
T ss_dssp             HHHHTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HhccCc---cCCCCCCCCHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHhhhc
Confidence            011111   223445567889999999999     999999999999999999976543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=9.8e-36  Score=265.67  Aligned_cols=228  Identities=19%  Similarity=0.251  Sum_probs=176.6

Q ss_pred             HHhhccccccCCccccceeeecceee----cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV----SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||++.+.+.    ..++..||+|++.......   .+.+|+. ++++ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            36899999999999999999987532    1356899999998654433   5667777 8888 899999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCC---------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGG---------------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      +. +++||||+++|+|.+++.....               .+++..++.++.|++.||+|||+.   +++||||||+|||
T Consensus       114 ~~-~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          114 GP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL  189 (334)
T ss_dssp             SC-CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             Cc-eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence            54 4999999999999999987542               489999999999999999999765   8999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CCCCc---------c--
Q 046594          195 LDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ---------E--  239 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~--  239 (304)
                      ++.++.+||+|||+++.......    ....++          ...++  +||||        ...+.         +  
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  269 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  269 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence            99999999999999987654332    111111          12233  99999        11011         1  


Q ss_pred             -eeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          240 -CLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       240 -~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                       .+....   ....+..++..+.+++.+||+     .||.+|||+.+++++|+++.....
T Consensus       270 ~~~~~~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~ell~~L~~l~~~~~  321 (334)
T 2pvf_A          270 KLLKEGH---RMDKPANCTNELYMMMRDCWH-----AVPSQRPTFKQLVEDLDRILTLTT  321 (334)
T ss_dssp             HHHHHTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHHhcCC---CCCCCccCCHHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHhccc
Confidence             111111   234455667889999999999     999999999999999999987654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.7e-36  Score=262.64  Aligned_cols=217  Identities=20%  Similarity=0.211  Sum_probs=165.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++.+.||+|+||.||++.++   .+++.||+|++......    ..+.+|+. +++++||||+++++++.++ ..++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~   77 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNR---ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-KKLT   77 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-TEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEEC---CCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-CEEE
Confidence            57999999999999999999886   35789999999754432    25667777 9999999999999999887 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++ +|.+.+....+.+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++....
T Consensus        78 lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           78 LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             EEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            99999976 77777766555899999999999999999999765   899999999999999999999999999987653


Q ss_pred             CCC--Cccccc-----------Ccccc--ccccc---------------CCCCc------ceec-------cc-------
Q 046594          215 GSN--RRNCEK-----------TSEMA--EDIND---------------FVGGQ------ECLD-------QR-------  244 (304)
Q Consensus       215 ~~~--~~~~~~-----------~~~~s--~DV~S---------------~~~~~------~~~~-------~~-------  244 (304)
                      ...  ....++           ...++  +||||               +....      .+..       ..       
T Consensus       154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  233 (292)
T 3o0g_A          154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence            322  222222           11133  89999               11110      0000       00       


Q ss_pred             --c--------CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 --L--------YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 --~--------~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                        .        ...........+..+.+++.+||+     .||++|||+.|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLK-----CNPVQRISAEEALQH  283 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             ccccccccccCCcchhhcccccChHHHHHHHHHhc-----cChhhCCCHHHHhcC
Confidence              0        000011223456788999999999     999999999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.3e-36  Score=268.74  Aligned_cols=227  Identities=22%  Similarity=0.196  Sum_probs=173.8

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.+..  ..+..||+|.+.......   .+.+|+. ++++ +||||+++++++...+.
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            368999999999999999999875422  246789999997543222   6777777 9999 99999999999988755


Q ss_pred             ceEEEEeecCCCChhhHhhhcCC----------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG----------------------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT  189 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlk  189 (304)
                      . ++||||+++|+|.+++.....                      .+++..++.++.|++.||+|||+.   ||+|||||
T Consensus       124 ~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik  199 (344)
T 1rjb_A          124 I-YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA  199 (344)
T ss_dssp             C-EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred             c-EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence            4 999999999999999987542                      379999999999999999999764   89999999


Q ss_pred             CCCeeeCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CCCCc-------
Q 046594          190 SDNILLDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ-------  238 (304)
Q Consensus       190 p~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~-------  238 (304)
                      |+|||++.++.+||+|||++........    ....++          ...++  +||||        ...+.       
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999999999987654332    111111          12233  89999        11011       


Q ss_pred             ------ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          239 ------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       239 ------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                            ..+....   ....+...+..+.+++.+||+     .||.+|||+.+++++|+.+.+..
T Consensus       280 ~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          280 VDANFYKLIQNGF---KMDQPFYATEEIYIIMQSCWA-----FDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             CSHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHC---
T ss_pred             cHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHcC-----CCchhCcCHHHHHHHHHHHHHHH
Confidence                  1111222   234455667889999999999     99999999999999999987654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-35  Score=263.74  Aligned_cols=227  Identities=22%  Similarity=0.235  Sum_probs=171.0

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHH-HHHHH-hhCCCCCcccceeeeeeCCC---C
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL-EEEIL-LKSSSHLNIVTLLGYPQDGL---Q  131 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~e~~-l~~l~h~niv~~~~~~~~~~---~  131 (304)
                      .+.++|++.+.||+|+||.||++.+.     ++.||||++......... +.++. ...++||||+++++++....   .
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR-----GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET-----TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC-----CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            34679999999999999999998764     689999999765444433 33344 44569999999999987763   3


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY-----SKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~-----~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      .+++||||+++|+|.+++...  .+++..++.++.|++.||+|||+.     ++++|+||||||+|||++.++.+||+||
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  186 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL  186 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred             ceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence            469999999999999999765  599999999999999999999764     2448999999999999999999999999


Q ss_pred             ccccccCCCCCC------cccccCcccc------------------ccccc---------CC---C---------Ccc--
Q 046594          207 GAANYCSGGSNR------RNCEKTSEMA------------------EDIND---------FV---G---------GQE--  239 (304)
Q Consensus       207 gla~~~~~~~~~------~~~~~~~~~s------------------~DV~S---------~~---~---------~~~--  239 (304)
                      |+++........      ...++..+++                  +||||         ..   .         ...  
T Consensus       187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~  266 (337)
T 3mdy_A          187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV  266 (337)
T ss_dssp             TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence            999766443221      1122211111                  69999         11   0         000  


Q ss_pred             ------------eeccccCCCCCCcc-----hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          240 ------------CLDQRLYIPNEKFK-----ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       240 ------------~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                                  ......   ...++     ..++..+.+++.+||+     .||++|||+.+++++|+++.+...
T Consensus       267 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~-----~dP~~Rps~~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          267 PSDPSYEDMREIVCIKKL---RPSFPNRWSSDECLRQMGKLMTECWA-----HNPASRLTALRVKKTLAKMSESQD  334 (337)
T ss_dssp             CSSCCHHHHHHHHTTSCC---CCCCCGGGGGSHHHHHHHHHHHHHSC-----SSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             CCCCchhhhHHHHhhhcc---CccccccchhhHHHHHHHHHHHHhhh-----hChhhCCCHHHHHHHHHHHHhhcc
Confidence                        000111   12222     3677889999999999     999999999999999999987653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-35  Score=264.78  Aligned_cols=229  Identities=18%  Similarity=0.200  Sum_probs=172.6

Q ss_pred             HHhhccccccCCccccceeeecceeec-CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS-RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.++... ..+..||||.+.......   .+.+|+. +++++||||+++++++...+. +
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~  121 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP-M  121 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-E
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC-c
Confidence            356888899999999999999876432 224579999998654332   6677777 999999999999999988744 4


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+++...
T Consensus       122 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            999999999999999988766899999999999999999999765   89999999999999999999999999998765


Q ss_pred             CCCC-----Cccccc----------Ccccc--ccccc--------CCCCc---------cee---ccccCCCCCCcchHH
Q 046594          214 GGSN-----RRNCEK----------TSEMA--EDIND--------FVGGQ---------ECL---DQRLYIPNEKFKITS  256 (304)
Q Consensus       214 ~~~~-----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~---~~~~~~~~~~~~~~~  256 (304)
                      ....     ....++          ...++  +||||        ...+.         ++.   ....   ....+...
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~  275 (333)
T 1mqb_A          199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF---RLPTPMDC  275 (333)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC---CCCCCTTC
T ss_pred             cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC---cCCCcccC
Confidence            4322     111111          22233  89999        11011         111   1111   22344566


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                      +..+.+++.+||+     .||++||++.+++++|+++.+....
T Consensus       276 ~~~l~~li~~~l~-----~~p~~Rps~~~l~~~L~~~~~~~~~  313 (333)
T 1mqb_A          276 PSAIYQLMMQCWQ-----QERARRPKFADIVSILDKLIRAPDS  313 (333)
T ss_dssp             BHHHHHHHHHHTC-----SSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred             CHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHhcchh
Confidence            7889999999999     9999999999999999999876553

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=5.7e-36  Score=266.36  Aligned_cols=227  Identities=19%  Similarity=0.195  Sum_probs=176.7

Q ss_pred             HHhhccccccCCccccceeeecceee-cCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCC-CCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV-SRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~  133 (304)
                      .++|++.+.||+|+||.||++.+... ...++.||||++.......  .+.+|+. +++++||||+++++++... ...+
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            46899999999999999999985321 2467899999998665443  6778888 9999999999999998743 3456


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++....
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  178 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP  178 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred             EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence            899999999999999987655799999999999999999999764   89999999999999999999999999998775


Q ss_pred             CCCC-----Cccccc----------Ccccc--ccccc---------C--CCCc-----------------------ceec
Q 046594          214 GGSN-----RRNCEK----------TSEMA--EDIND---------F--VGGQ-----------------------ECLD  242 (304)
Q Consensus       214 ~~~~-----~~~~~~----------~~~~s--~DV~S---------~--~~~~-----------------------~~~~  242 (304)
                      ....     ....++          ...++  +||||         .  .+..                       +.+.
T Consensus       179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (327)
T 3lxl_A          179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE  258 (327)
T ss_dssp             TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred             cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence            4432     111111          11223  89999         1  0000                       1111


Q ss_pred             cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          243 QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       243 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      ...   ....+..++..+.+++.+||+     .||++|||+.+++++|+.+...
T Consensus       259 ~~~---~~~~~~~~~~~l~~li~~~l~-----~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          259 EGQ---RLPAPPACPAEVHELMKLCWA-----PSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             TTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHC---
T ss_pred             ccc---CCCCCCcccHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHhh
Confidence            122   234455667889999999999     9999999999999999988653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.7e-36  Score=280.31  Aligned_cols=221  Identities=20%  Similarity=0.196  Sum_probs=173.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.+.    ++..||||+++..... ..+.+|+. +++++||||+++++++..  ..+++|
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~--~~~~lv  260 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYII  260 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET----TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEE
T ss_pred             hHHeEEEEEcccCCceEEEEEEEC----CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeC--CccEEE
Confidence            357888999999999999998774    4678999999865433 37777888 999999999999999863  345999


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++|+|.+++..... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~  337 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN  337 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence            999999999999986532 689999999999999999999765   8999999999999999999999999999876542


Q ss_pred             CC---Cccccc----------Ccccc--ccccc--------CC-------CCc--c---eeccccCCCCCCcchHHHHHH
Q 046594          216 SN---RRNCEK----------TSEMA--EDIND--------FV-------GGQ--E---CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~---~~~~~~----------~~~~s--~DV~S--------~~-------~~~--~---~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..   ....++          .+.++  +||||        ..       ...  +   .+....   +...+..++..+
T Consensus       338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l  414 (454)
T 1qcf_A          338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---RMPRPENCPEEL  414 (454)
T ss_dssp             HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC---CCCCCTTSCHHH
T ss_pred             ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHH
Confidence            21   111111          12233  89999        11       111  1   111122   233456677889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      .+++.+||+     .||++|||+.++++.|+.+...
T Consensus       415 ~~li~~cl~-----~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          415 YNIMMRCWK-----NRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHHHHHTC-----SSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHHHHHcc-----CChhHCcCHHHHHHHHHHHHhc
Confidence            999999999     9999999999999999988653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.2e-35  Score=260.73  Aligned_cols=223  Identities=22%  Similarity=0.199  Sum_probs=166.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHH-HHHHH-hhCCCCCcccceeeeeeCC---CCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL-EEEIL-LKSSSHLNIVTLLGYPQDG---LQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~e~~-l~~l~h~niv~~~~~~~~~---~~~~  133 (304)
                      .++|++.+.||+|+||.||++.+     +++.||||++......... +.++. ...++||||+++++++...   ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-----QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-----CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            46899999999999999999876     4689999999765444433 33333 4558999999999987543   2446


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY-----SKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~-----~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      ++||||+++|+|.++++..  .+++..++.++.|++.||+|||..     ++.+|+||||||+|||++.++.+||+|||+
T Consensus        82 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            9999999999999999654  699999999999999999999831     156899999999999999999999999999


Q ss_pred             ccccCCCCC------Cccccc----------Cc------ccc--ccccc---------CC------------CCcc----
Q 046594          209 ANYCSGGSN------RRNCEK----------TS------EMA--EDIND---------FV------------GGQE----  239 (304)
Q Consensus       209 a~~~~~~~~------~~~~~~----------~~------~~s--~DV~S---------~~------------~~~~----  239 (304)
                      ++.......      ....++          ..      .++  +||||         ..            +...    
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence            976544332      011222          11      222  89999         11            0000    


Q ss_pred             ----------eecccc--CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          240 ----------CLDQRL--YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       240 ----------~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                                ......  ..+...++...+..+.+++.+||+     .||++|||+.++++.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~-----~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWY-----QNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCC-----SSGGGSCCHHHHHHHHHHH
T ss_pred             CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhh-----cChhhCCCHHHHHHHHhcc
Confidence                      000000  001111234567889999999999     9999999999999999986

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.1e-36  Score=261.86  Aligned_cols=226  Identities=20%  Similarity=0.233  Sum_probs=170.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .++|++.+.||+|+||.||++.+.     |+.||||.++.......+.+|+. +++++||||+++++++...++.+++||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-----TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-----CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            468999999999999999998763     68999999987665557777888 999999999999999877655669999


Q ss_pred             eecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|.+++...+. .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.......
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  171 (278)
T 1byg_A           95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  171 (278)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence            99999999999987542 489999999999999999999765   89999999999999999999999999998665433


Q ss_pred             C--Cccccc-------Ccccc--ccccc--------CCCCc---------ceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          217 N--RRNCEK-------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       217 ~--~~~~~~-------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                      .  ..+...       ...++  +||||        ...+.         +.............+...+..+.+++.+||
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  251 (278)
T 1byg_A          172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCW  251 (278)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHh
Confidence            2  111111       12233  99999        11011         111111000023445566788999999999


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          269 SCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +     .||++|||+.++++.|+.+...+
T Consensus       252 ~-----~~p~~Rps~~~l~~~L~~i~~~~  275 (278)
T 1byg_A          252 H-----LDAAMRPSFLQLREQLEHIKTHE  275 (278)
T ss_dssp             C-----SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             c-----CChhhCCCHHHHHHHHHHHHhhh
Confidence            9     99999999999999999987643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=5.9e-36  Score=272.43  Aligned_cols=218  Identities=16%  Similarity=0.149  Sum_probs=171.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.+|+|.+......+  .+.+|+. ++.++||||+++++++.+. ..+++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-~~~~l  125 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEK---ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK-YEMVL  125 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS-SEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEEC---CCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC-CEEEE
Confidence            468999999999999999999876   357899999998654333  6777888 9999999999999999887 45599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC--CCCeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE--LCNAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~--~~~~kl~Dfgla~~~~  213 (304)
                      ||||+++|+|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++.  ++.+||+|||+++...
T Consensus       126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence            9999999999999987665799999999999999999999765   8999999999999974  4789999999998876


Q ss_pred             CCCC-Cccccc----------Ccccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... ....++          ...++  +||||              |....  +    +...... .........+..+
T Consensus       203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s~~~  281 (387)
T 1kob_A          203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE-FDEDAFSSVSPEA  281 (387)
T ss_dssp             TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC-CCSSTTTTSCHHH
T ss_pred             CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCccccccCCHHH
Confidence            5433 222233          22233  89999              22211  1    1111110 0122334567889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+++.+||.     .||++|||+.|+++|
T Consensus       282 ~~li~~~L~-----~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          282 KDFIKNLLQ-----KEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHHHTTSC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHHcC-----CChhHCcCHHHHhhC
Confidence            999999999     999999999999986

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.3e-35  Score=261.94  Aligned_cols=230  Identities=17%  Similarity=0.166  Sum_probs=166.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--h---hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--Q---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||+|++.....  .   ..+.+|+. +++++||||+++++++...+ .
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~  106 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACL---LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-E  106 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEET---TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-E
T ss_pred             ccceEEEEeecCCCCceEEEEEEc---CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-c
Confidence            458999999999999999999875   3579999999875321  1   26677777 99999999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          133 RCLVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      +++||||+++|+|.+++..   ....+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~  183 (310)
T 2wqm_A          107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG  183 (310)
T ss_dssp             EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---
T ss_pred             EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccce
Confidence            5999999999999999875   233799999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc----c----eeccccCCCCCCcc
Q 046594          210 NYCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ----E----CLDQRLYIPNEKFK  253 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~----~----~~~~~~~~~~~~~~  253 (304)
                      ........  ....++          ...++  +||||              |....    .    +.....   ....+
T Consensus       184 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~  260 (310)
T 2wqm_A          184 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY---PPLPS  260 (310)
T ss_dssp             ---------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS---CCCCT
T ss_pred             eeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC---CCCcc
Confidence            86654322  111111          22233  89999              11111    0    011111   11112


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcccccC
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSVLSM  303 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~~~~~  303 (304)
                      ...+..+.+++.+||+     .||++|||+.+++++|+++.+....+.++
T Consensus       261 ~~~~~~l~~li~~~l~-----~dp~~Rps~~~il~~l~~l~~~~~~~~~~  305 (310)
T 2wqm_A          261 DHYSEELRQLVNMCIN-----PDPEKRPDVTYVYDVAKRMHACTASSLEH  305 (310)
T ss_dssp             TTSCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHHC-----
T ss_pred             cccCHHHHHHHHHHcC-----CChhhCCCHHHHHHHHHHHHHhhhhhhhh
Confidence            4456789999999999     99999999999999999999988777654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=5.2e-36  Score=265.98  Aligned_cols=231  Identities=16%  Similarity=0.154  Sum_probs=161.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc-
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR-  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~-  132 (304)
                      ..+|++.+.||+|+||.||++.++........||||++......    ..+.+|+. +++++||||+++++++...... 
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            45799999999999999999998754333358999999764321    26777888 9999999999999998776332 


Q ss_pred             ----eEEEEeecCCCChhhHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          133 ----RCLVFEFMQRGSLRWNLREKG-----GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       133 ----~~lv~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                          .++||||+++|+|.+++....     ..+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl  178 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV  178 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence                389999999999999986542     1589999999999999999999765   8999999999999999999999


Q ss_pred             cccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CCCCc---------ceeccccCCCCC
Q 046594          204 AGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ---------ECLDQRLYIPNE  250 (304)
Q Consensus       204 ~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~~~~~~~~~~  250 (304)
                      +|||+++.......    ....++          ...++  +||||        ...+.         +...........
T Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~  258 (323)
T 3qup_A          179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL  258 (323)
T ss_dssp             CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC
T ss_pred             eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCC
Confidence            99999987644332    111111          12223  99999        11011         111111100123


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      ..+...+..+.+++.+||+     .||++|||+.++++.|+++.+-.
T Consensus       259 ~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          259 KQPPECMEEVYDLMYQCWS-----ADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             CCCTTCCHHHHHHHHHTTC-----SSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             CCCCccCHHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHHHh
Confidence            4455667889999999999     99999999999999999987643

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.9e-36  Score=262.34  Aligned_cols=215  Identities=19%  Similarity=0.206  Sum_probs=163.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----------------------------hhHHHHHHH
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----------------------------QTKLEEEIL  110 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----------------------------~~~~~~e~~  110 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++.....                            ...+.+|+.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   88 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNE---NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA   88 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEET---TTTEEEEEEEEECC-------------------------------CHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEEC---CCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH
Confidence            468999999999999999999875   4578999999875431                            125677777


Q ss_pred             -hhCCCCCcccceeeeeeCC-CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 046594          111 -LKSSSHLNIVTLLGYPQDG-LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNI  188 (304)
Q Consensus       111 -l~~l~h~niv~~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dl  188 (304)
                       +++++||||+++++++.+. +..+++||||+++++|.+++...  .+++..++.++.|++.||+|||+.   +++||||
T Consensus        89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl  163 (298)
T 2zv2_A           89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI  163 (298)
T ss_dssp             HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence             9999999999999999863 35669999999999999876543  699999999999999999999765   8999999


Q ss_pred             CCCCeeeCCCCCeeEcccccccccCCCCC--Cccccc----------C-c--ccc--ccccc--------------CCCC
Q 046594          189 TSDNILLDELCNAKLAGFGAANYCSGGSN--RRNCEK----------T-S--EMA--EDIND--------------FVGG  237 (304)
Q Consensus       189 kp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~----------~-~--~~s--~DV~S--------------~~~~  237 (304)
                      ||+|||++.++.+||+|||+++.......  ....++          . .  ..+  +||||              |...
T Consensus       164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  243 (298)
T 2zv2_A          164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE  243 (298)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence            99999999999999999999987654332  122222          1 1  122  79999              2111


Q ss_pred             c------ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          238 Q------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       238 ~------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .      .+.....   ........+..+.+++.+||+     .||++|||+.|+++|
T Consensus       244 ~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          244 RIMCLHSKIKSQAL---EFPDQPDIAEDLKDLITRMLD-----KNPESRIVVPEIKLH  293 (298)
T ss_dssp             SHHHHHHHHHHCCC---CCCSSSCCCHHHHHHHHHHTC-----SCTTTSCCHHHHTTC
T ss_pred             cHHHHHHHHhcccC---CCCCccccCHHHHHHHHHHhh-----cChhhCCCHHHHhcC
Confidence            1      1111111   111223456789999999999     999999999999875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1e-35  Score=268.76  Aligned_cols=218  Identities=17%  Similarity=0.084  Sum_probs=170.0

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.||+|++......    ..+.+|+. ++.++||||+++++++.+.+. 
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-  102 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF-  102 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE-
T ss_pred             cccCeEEeeEEecCCCeEEEEEEEC---CCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE-
Confidence            3578999999999999999999876   45789999999764322    26677888 999999999999999988744 


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC---CCeeEcccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL---CNAKLAGFGAA  209 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~---~~~kl~Dfgla  209 (304)
                      .|+||||+++|+|.+.+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.+   +.+||+|||++
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a  178 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA  178 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence            499999999999999998765 799999999999999999999765   89999999999999865   45999999999


Q ss_pred             cccCCCCC-CcccccCc----------ccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHH
Q 046594          210 NYCSGGSN-RRNCEKTS----------EMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       210 ~~~~~~~~-~~~~~~~~----------~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~  256 (304)
                      ........ ....++..          .++  +||||              |....      .+....... ........
T Consensus       179 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~  257 (362)
T 2bdw_A          179 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY-PSPEWDTV  257 (362)
T ss_dssp             BCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-CTTGGGGS
T ss_pred             eEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC-CcccccCC
Confidence            87765433 22333321          233  99999              21111      111111100 11122345


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..+.+++.+||.     .||++|||+.++++|
T Consensus       258 ~~~~~~li~~~L~-----~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          258 TPEAKSLIDSMLT-----VNPKKRITADQALKV  285 (362)
T ss_dssp             CHHHHHHHHHHSC-----SSGGGSCCHHHHTTS
T ss_pred             CHHHHHHHHHHcC-----CChhhCcCHHHHhcC
Confidence            6889999999999     999999999999976

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.9e-36  Score=271.28  Aligned_cols=217  Identities=18%  Similarity=0.164  Sum_probs=166.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||+|+++....     ...+..|.. ++.+ +||||+++++++.+. .
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~-~   97 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVK---ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP-D   97 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-S
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEc---CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC-C
Confidence            568999999999999999999886   4579999999975421     114455555 7766 799999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||+++|+|.+++...+ .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~  173 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE  173 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence            5599999999999999998776 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC--CcccccCcccc------------ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          212 CSGGSN--RRNCEKTSEMA------------EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       212 ~~~~~~--~~~~~~~~~~s------------~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ......  ...+++..+++            +||||              |....  ++..... .....++...+..+.
T Consensus       174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~  252 (353)
T 3txo_A          174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL-NDEVVYPTWLHEDAT  252 (353)
T ss_dssp             SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHH
T ss_pred             cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHH
Confidence            433322  33344433322            89999              22211  1111111 012245556678899


Q ss_pred             HHHHHhccccCCCCCCCCCCCH------HHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKI------VDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~------~~vl~~  289 (304)
                      +++.+||.     .||.+||++      .++++|
T Consensus       253 ~li~~lL~-----~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          253 GILKSFMT-----KNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             HHHHHHTC-----SSGGGSTTSGGGTCTHHHHTS
T ss_pred             HHHHHHhh-----hCHHHccCCcccCCHHHHhhC
Confidence            99999999     999999998      777764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=8.3e-36  Score=277.92  Aligned_cols=216  Identities=21%  Similarity=0.174  Sum_probs=170.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.+.   .+|+.||||++......     ..+.+|+. ++.++||||+++++++...+ .+
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~-~~   91 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHE---LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS-DI   91 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEET---TTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-EE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-EE
Confidence            48999999999999999999876   35799999999754322     26777888 99999999999999998874 45


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++....
T Consensus        92 ~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~  167 (476)
T 2y94_A           92 FMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  167 (476)
T ss_dssp             EEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence            99999999999999998765 799999999999999999999654   89999999999999999999999999998776


Q ss_pred             CCCC-Cccccc----------C-cccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHH
Q 046594          214 GGSN-RRNCEK----------T-SEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       214 ~~~~-~~~~~~----------~-~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      .... ...+++          . .+.+  +||||              |....  ....... ......+...+..+.++
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~L  246 (476)
T 2y94_A          168 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC-DGIFYTPQYLNPSVISL  246 (476)
T ss_dssp             TTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHH-TTCCCCCTTCCHHHHHH
T ss_pred             ccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHh-cCCcCCCccCCHHHHHH
Confidence            5433 223333          1 1222  89999              22111  1111111 00123344556789999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+||.     .||.+|||+.++++|
T Consensus       247 i~~~L~-----~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          247 LKHMLQ-----VDPMKRATIKDIREH  267 (476)
T ss_dssp             HHHHTC-----SSTTTSCCHHHHHTC
T ss_pred             HHHHcC-----CCchhCcCHHHHHhC
Confidence            999999     999999999999985

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.9e-36  Score=266.56  Aligned_cols=227  Identities=16%  Similarity=0.151  Sum_probs=170.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCC-CcEEEEEEeccccc---hhHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRN-LTVVAVKARRYMAS---QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~-~~~vavK~~~~~~~---~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+...... ...+|+|.+.....   ...+.+|+. ++.++||||+++++++... .. 
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~-   91 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV-   91 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SE-
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cc-
Confidence            46899999999999999999987643211 12468888764432   226777777 9999999999999999876 34 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++++||+++|+|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            899999999999999988776899999999999999999999765   89999999999999999999999999998765


Q ss_pred             CCCC----Cccccc----------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHHH
Q 046594          214 GGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       214 ~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ....    ....++          ...++  +||||        ...+.            ..+....   ....+...+
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  245 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICT  245 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC---CCCCCTTBC
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC---CCCCCccCC
Confidence            4332    111111          12223  89999        11011            1111222   234455677


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+.+++.+||.     .||.+|||+.++++.|+++.+.+.
T Consensus       246 ~~l~~li~~~l~-----~dp~~Rps~~ell~~L~~~~~~~~  281 (327)
T 3lzb_A          246 IDVYMIMRKCWM-----IDADSRPKFRELIIEFSKMARDPQ  281 (327)
T ss_dssp             HHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHTSHH
T ss_pred             HHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHHHhCcC
Confidence            889999999999     999999999999999999986554

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.3e-35  Score=262.33  Aligned_cols=230  Identities=18%  Similarity=0.146  Sum_probs=167.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCC--
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ--  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~--  131 (304)
                      ..+|++.+.||+|+||.||++.+......+..||+|.+.......    .+.+|+. +++++||||+++++++...+.  
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            468999999999999999999876544456789999997553222    5777777 999999999999999877542  


Q ss_pred             --ceEEEEeecCCCChhhHhhhc-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          132 --RRCLVFEFMQRGSLRWNLREK-----GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       132 --~~~lv~e~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                        ..++||||+++|+|.+++...     ...+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~  189 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVA  189 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEe
Confidence              358999999999999998532     23799999999999999999999654   89999999999999999999999


Q ss_pred             ccccccccCCCCC----Cccccc----------Ccccc--ccccc---------C-C--CCc-----ceeccccCCCCCC
Q 046594          205 GFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND---------F-V--GGQ-----ECLDQRLYIPNEK  251 (304)
Q Consensus       205 Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S---------~-~--~~~-----~~~~~~~~~~~~~  251 (304)
                      |||++........    ....++          ...++  +||||         . .  +..     +..+.........
T Consensus       190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  269 (313)
T 3brb_A          190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK  269 (313)
T ss_dssp             SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC
T ss_pred             ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCC
Confidence            9999987644321    111111          22223  89999         1 1  111     1111111001234


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      .+...+..+.+++.+||.     .||.+|||+.+++++|+++.+.
T Consensus       270 ~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          270 QPEDCLDELYEIMYSCWR-----TDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             CBTTCCHHHHHHHHHTTC-----SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCccccHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHh
Confidence            556677889999999999     9999999999999999998764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=7.9e-36  Score=265.83  Aligned_cols=224  Identities=16%  Similarity=0.094  Sum_probs=172.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++........+..|+. ++++ +||||+++++++...+ ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-~~~lv   83 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNL---YTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGK-YNAMV   83 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEET---TTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETT-EEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEEC---CCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCC-ccEEE
Confidence            368999999999999999999865   4579999999986655556777777 9999 9999999999998874 45999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC-----eeEcccccccc
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN-----AKLAGFGAANY  211 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~-----~kl~Dfgla~~  211 (304)
                      |||+ +++|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.     +||+|||+++.
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           84 LELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             EEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            9999 8899999987655899999999999999999999765   8999999999999998887     99999999987


Q ss_pred             cCCCCC---------CcccccCc----------ccc--ccccc--------------CCCCc--c-------eeccccCC
Q 046594          212 CSGGSN---------RRNCEKTS----------EMA--EDIND--------------FVGGQ--E-------CLDQRLYI  247 (304)
Q Consensus       212 ~~~~~~---------~~~~~~~~----------~~s--~DV~S--------------~~~~~--~-------~~~~~~~~  247 (304)
                      ......         ....++..          .++  +||||              |....  .       +.......
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~  239 (330)
T 2izr_A          160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT  239 (330)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred             eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence            644322         12223322          223  89999              21110  0       00001100


Q ss_pred             CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          248 PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       248 ~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      +........+ .+.+++.+||+     .||.+||++.++.+.|+.+.+.
T Consensus       240 ~~~~~~~~~p-~~~~li~~~l~-----~~p~~RP~~~~l~~~l~~~~~~  282 (330)
T 2izr_A          240 PIEVLCENFP-EMATYLRYVRR-----LDFFEKPDYDYLRKLFTDLFDR  282 (330)
T ss_dssp             CHHHHTTTCH-HHHHHHHHHHH-----CCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CHHHHhccCh-HHHHHHHHHHh-----CCCCCCCCHHHHHHHHHHHHHH
Confidence            0000011133 89999999999     9999999999999999988764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.5e-35  Score=259.69  Aligned_cols=228  Identities=17%  Similarity=0.126  Sum_probs=175.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCC-ce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-RR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~-~~  133 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++......   ..+.+|+. +++++||||+++++++...+. .+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHK---KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK   84 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEEC---CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence            358999999999999999999886   35789999999764432   25666777 999999999999999876543 56


Q ss_pred             EEEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee----CCCCCeeEcccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL----DELCNAKLAGFG  207 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill----~~~~~~kl~Dfg  207 (304)
                      ++||||+++|+|.+++.....  .+++..++.++.|++.||+|||+.   +|+||||||+|||+    +.++.+||+|||
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence            999999999999999987543  499999999999999999999765   89999999999999    778889999999


Q ss_pred             cccccCCCCC-Cccccc------------------Ccccc--ccccc--------------CCCCc----------cee-
Q 046594          208 AANYCSGGSN-RRNCEK------------------TSEMA--EDIND--------------FVGGQ----------ECL-  241 (304)
Q Consensus       208 la~~~~~~~~-~~~~~~------------------~~~~s--~DV~S--------------~~~~~----------~~~-  241 (304)
                      +++....... ....++                  ...++  +||||              |....          .+. 
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  241 (319)
T 4euu_A          162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (319)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred             CceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence            9987755443 222222                  12233  89999              11100          000 


Q ss_pred             --------------------ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          242 --------------------DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       242 --------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                                          ...+ .....++......+.+++.+||+     .||++|||+.|+++|.+......+
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~-----~dP~~R~s~~ell~h~~d~~~~~~  312 (319)
T 4euu_A          242 GKPSGAISGVQKAENGPIDWSGDM-PVSCSLSRGLQVLLTPVLANILE-----ADQEKCWGFDQFFAETSDILHRGN  312 (319)
T ss_dssp             HCCTTCCEEEECSTTCCEEEESSC-CTTCSSCHHHHHHHHHHHHHHSC-----CCTTTSCCHHHHHHHHHHHTC---
T ss_pred             CCCcccchhhhcccCCccccCccC-CcccccchhHHHHhHHHHHHhcc-----CChhhhccHHHhhhccHHHhhcCC
Confidence                                0011 00124556778889999999999     999999999999999987655443

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.5e-35  Score=263.54  Aligned_cols=227  Identities=20%  Similarity=0.195  Sum_probs=174.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcE--EEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTV--VAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~--vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++.   ++..  +|+|.+.......   .+.+|+. ++++ +||||+++++++.+.+ 
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-   99 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-   99 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEE---TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT-
T ss_pred             HHHccceeeeecCCCceEEEEEEcc---CCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC-
Confidence            4689999999999999999998864   3454  5999987543322   6777777 9999 9999999999998874 


Q ss_pred             ceEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD  196 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~  196 (304)
                      .+++||||+++|+|.+++....               ..+++..++.++.|++.||+|||+.   +++||||||+|||++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~  176 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG  176 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence            4599999999999999997653               3799999999999999999999764   899999999999999


Q ss_pred             CCCCeeEcccccccccCCCCC-Cccccc----------Ccccc--ccccc--------CC-C---Cc--------ceecc
Q 046594          197 ELCNAKLAGFGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------FV-G---GQ--------ECLDQ  243 (304)
Q Consensus       197 ~~~~~kl~Dfgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------~~-~---~~--------~~~~~  243 (304)
                      .++.+||+|||+++....... ....++          ...++  +||||        .. +   ..        ..+..
T Consensus       177 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~  256 (327)
T 1fvr_A          177 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  256 (327)
T ss_dssp             GGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG
T ss_pred             CCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc
Confidence            999999999999975432221 111111          12223  99999        11 1   10        11111


Q ss_pred             ccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhccc
Q 046594          244 RLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSV  300 (304)
Q Consensus       244 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~~  300 (304)
                      ..   ....+...+..+.+++.+||.     .||.+|||+.+++++|+++.+.....
T Consensus       257 ~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~ell~~L~~~~~~~~~~  305 (327)
T 1fvr_A          257 GY---RLEKPLNCDDEVYDLMRQCWR-----EKPYERPSFAQILVSLNRMLEERKTY  305 (327)
T ss_dssp             TC---CCCCCTTBCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHSSSCS
T ss_pred             CC---CCCCCCCCCHHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHHhhcCc
Confidence            11   234455667889999999999     99999999999999999998765543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=7.8e-36  Score=263.95  Aligned_cols=217  Identities=21%  Similarity=0.211  Sum_probs=162.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+.    +++.||+|++.......    .+.+|+. +++++||||+++++++.+.+ .+
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   94 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDS----QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER-CL   94 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEET----TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-CE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEEC----CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-EE
Confidence            358999999999999999999873    57999999997543322    5667777 99999999999999998774 45


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++ +|.+.+......+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++...
T Consensus        95 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A           95 TLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             EEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             EEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            999999985 89888887766799999999999999999999765   89999999999999999999999999998765


Q ss_pred             CCCC--Cccccc-----------Ccccc--ccccc--------------CCCCc------ceec---c------------
Q 046594          214 GGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ------ECLD---Q------------  243 (304)
Q Consensus       214 ~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~~~---~------------  243 (304)
                      ....  ....++           ...++  +||||              |+...      .+..   .            
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  250 (311)
T 3niz_A          171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL  250 (311)
T ss_dssp             SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred             CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence            3322  111222           12233  89999              21111      0000   0            


Q ss_pred             ------ccCC----CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          244 ------RLYI----PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       244 ------~~~~----~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                            ....    +........+.++.+++.+||+     .||++|||+.|+++|
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLC-----FDPNKRISARDAMNH  301 (311)
T ss_dssp             HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSC-----SCTTTSCCHHHHHTS
T ss_pred             chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcC-----CChhHCCCHHHHhcC
Confidence                  0000    0000112345678999999999     999999999999975

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2e-35  Score=262.76  Aligned_cols=227  Identities=21%  Similarity=0.215  Sum_probs=177.3

Q ss_pred             HHhhccccccCCccccceeeeccee-ecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCC-Cce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRA-VSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGL-QRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~-~~~  133 (304)
                      .++|++.+.||+|+||.||++.+.. ...+++.||||++.......  .+.+|+. +++++||||+++++++...+ ..+
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            4679999999999999999998532 12467999999998755443  6778888 99999999999999987653 356


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++....
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~  196 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP  196 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence            999999999999999988766799999999999999999999764   89999999999999999999999999998775


Q ss_pred             CCCC-----Cccccc----------Ccccc--ccccc-----------CCCCc------------------------cee
Q 046594          214 GGSN-----RRNCEK----------TSEMA--EDIND-----------FVGGQ------------------------ECL  241 (304)
Q Consensus       214 ~~~~-----~~~~~~----------~~~~s--~DV~S-----------~~~~~------------------------~~~  241 (304)
                      ....     ....++          ...++  +||||           .....                        +.+
T Consensus       197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (326)
T 2w1i_A          197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL  276 (326)
T ss_dssp             SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred             ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence            4432     111111          11223  99999           11000                        001


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      ....   ....+..++..+.+++.+||+     .||++|||+.++++.|+++.+.
T Consensus       277 ~~~~---~~~~~~~~~~~l~~li~~cl~-----~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          277 KNNG---RLPRPDGCPDEIYMIMTECWN-----NNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             HTTC---CCCCCTTCCHHHHHHHHHHSC-----SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCCCCcccHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHH
Confidence            1111   223455667889999999999     9999999999999999998764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-35  Score=257.51  Aligned_cols=226  Identities=17%  Similarity=0.155  Sum_probs=175.9

Q ss_pred             Hhhcccc-ccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLK-SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~-~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|.+.+ .||+|+||.||++.++.. ..+..||+|.++......   .+.+|+. +++++||||+++++++..  +.++
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~   85 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALM   85 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccC-CCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC--CCcE
Confidence            4677776 999999999999986533 346889999998754332   6777888 999999999999999944  3359


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.....
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            99999999999999987666899999999999999999999765   899999999999999999999999999987754


Q ss_pred             CCC-----Cccccc----------Ccccc--ccccc--------CCCCc---------ce---eccccCCCCCCcchHHH
Q 046594          215 GSN-----RRNCEK----------TSEMA--EDIND--------FVGGQ---------EC---LDQRLYIPNEKFKITSL  257 (304)
Q Consensus       215 ~~~-----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~---~~~~~~~~~~~~~~~~~  257 (304)
                      ...     ....++          ...++  +||||        ...+.         +.   +....   ....+...+
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~~  239 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPECP  239 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC---CCCCCTTCC
T ss_pred             CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCC---cCCCCCCcC
Confidence            332     111111          12233  99999        11011         11   11111   234556778


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                      ..+.+++.+||+     .||++|||+.+++++|+++......
T Consensus       240 ~~l~~li~~~l~-----~~p~~Rps~~~l~~~l~~~~~~~~~  276 (287)
T 1u59_A          240 PELYALMSDCWI-----YKWEDRPDFLTVEQRMRACYYSLAS  276 (287)
T ss_dssp             HHHHHHHHHTTC-----SSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHhcCC
Confidence            899999999999     9999999999999999999775543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.2e-35  Score=256.46  Aligned_cols=223  Identities=18%  Similarity=0.196  Sum_probs=174.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC-CCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG-LQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+.     ++.+|||++.......    .+.+|+. +++++||||+++++++.+. ...
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   83 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-----GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH   83 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-----TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSS
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-----CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCC
Confidence            468999999999999999999874     6889999998654222    6778888 9999999999999999876 234


Q ss_pred             eEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      +++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. ..+++||||||+|||++.++.++|.|||++..
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A           84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceee
Confidence            5999999999999999987654 599999999999999999999653 22299999999999999999999999888765


Q ss_pred             cCCCCCCccccc----------Cccc--cccccc--------------CCCCc------ceeccccCCCCCCcchHHHHH
Q 046594          212 CSGGSNRRNCEK----------TSEM--AEDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       212 ~~~~~~~~~~~~----------~~~~--s~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ........+..+          ....  ++||||              |....      .......   ....+...+..
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  239 (271)
T 3kmu_A          163 FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL---RPTIPPGISPH  239 (271)
T ss_dssp             TSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCC---CCCCCTTCCHH
T ss_pred             ecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCC---CCCCCCCCCHH
Confidence            443332111111          1112  289999              21111      1111222   34455667788


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +.+++.+||+     .||++|||+.++++.|+++.+
T Consensus       240 ~~~li~~~l~-----~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          240 VSKLMKICMN-----EDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHHcC-----CChhhCcCHHHHHHHHHHhhc
Confidence            9999999999     999999999999999998854

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=4e-36  Score=261.47  Aligned_cols=226  Identities=17%  Similarity=0.176  Sum_probs=173.9

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeC-------
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQD-------  128 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~-------  128 (304)
                      .+..+|++.+.||+|+||.||++.+.   .+++.||+|.+....  ..+.+|+. +++++||||+++++++..       
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (284)
T 2a19_B            8 RFGMDFKEIELIGSGGFGQVFKAKHR---IDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET   82 (284)
T ss_dssp             HHHHHEEEEEEEECSSSCCEEEEEET---TTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred             hhccccceeeeeccCCceEEEEEEEc---CCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence            34678999999999999999999875   357999999997643  34556677 999999999999998754       


Q ss_pred             --------CCCceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC
Q 046594          129 --------GLQRRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC  199 (304)
Q Consensus       129 --------~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~  199 (304)
                              ....+++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.   +++||||||+|||++.++
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~  159 (284)
T 2a19_B           83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK  159 (284)
T ss_dssp             ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred             ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence                    1234699999999999999997653 3799999999999999999999765   899999999999999999


Q ss_pred             CeeEcccccccccCCCCC-Cccccc----------Ccccc--ccccc--------CCCCc------ceeccccCCCCCCc
Q 046594          200 NAKLAGFGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------FVGGQ------ECLDQRLYIPNEKF  252 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------~~~~~------~~~~~~~~~~~~~~  252 (304)
                      .+||+|||++........ ....++          ...++  +||||        .....      .......   ....
T Consensus       160 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~---~~~~  236 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR---DGII  236 (284)
T ss_dssp             EEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH---TTCC
T ss_pred             CEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhh---cccc
Confidence            999999999987755433 222222          22223  89999        11110      1111111   1223


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      +...+..+.+++.+||+     .||.+|||+.+++++|+.+.....
T Consensus       237 ~~~~~~~~~~li~~~l~-----~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          237 SDIFDKKEKTLLQKLLS-----KKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             CTTSCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHTC---
T ss_pred             cccCCHHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHhhCCC
Confidence            34455778899999999     999999999999999999876544

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=6.3e-36  Score=272.68  Aligned_cols=218  Identities=16%  Similarity=0.152  Sum_probs=167.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.+|+|+++......     .+..|.. +.++ +||||+++++++.+. .
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~---~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~-~  126 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLK---KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-S  126 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS-S
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC-C
Confidence            568999999999999999999886   357899999997543221     4555555 6655 899999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence            5599999999999999998766 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCC-C-CcccccCcc----------cc--ccccc-----------CCCCc-------------ceeccccCCCCCCcc
Q 046594          212 CSGGS-N-RRNCEKTSE----------MA--EDIND-----------FVGGQ-------------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       212 ~~~~~-~-~~~~~~~~~----------~s--~DV~S-----------~~~~~-------------~~~~~~~~~~~~~~~  253 (304)
                      ..... . ...+++..+          ++  +||||           .++..             +.+...+......+|
T Consensus       203 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p  282 (396)
T 4dc2_A          203 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP  282 (396)
T ss_dssp             CCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC
T ss_pred             cccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC
Confidence            43222 2 333444222          22  89999           11110             000011101123456


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCH------HHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKI------VDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~------~~vl~~  289 (304)
                      ...+..+.+|+.+||+     .||.+||++      .|+++|
T Consensus       283 ~~~s~~~~~li~~lL~-----~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          283 RSLSVKAASVLKSFLN-----KDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             TTSCHHHHHHHHHHTC-----SCTTTSTTCSTTTHHHHHHHS
T ss_pred             CcCCHHHHHHHHHHhc-----CCHhHcCCCCCCCCHHHHhcC
Confidence            6677889999999999     999999985      566654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=6.3e-35  Score=257.07  Aligned_cols=214  Identities=28%  Similarity=0.392  Sum_probs=167.9

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccc------hhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS------QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+.||+|+||.||++.+     +++.+|+|++.....      ...+.+|+. ++.++||||+++++++...+.. ++|
T Consensus        35 ~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-~lv  108 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYV-----NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLV  108 (307)
T ss_dssp             TCCEEEECSSEEEEEEES-----SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC-EEE
T ss_pred             cCCccccCCCeEEEEEEE-----CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCce-EEE
Confidence            348899999999999876     368999999875321      126777888 9999999999999999887555 999


Q ss_pred             EeecCCCChhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          137 FEFMQRGSLRWNLREKG--GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      |||+++|+|.+++....  .++++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.....
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK  185 (307)
T ss_dssp             EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeeccccccccc
Confidence            99999999999987542  3699999999999999999999765   899999999999999999999999999987654


Q ss_pred             CCC----Cccccc---------Ccccc--ccccc--------------CCCCc--------------------ceecccc
Q 046594          215 GSN----RRNCEK---------TSEMA--EDIND--------------FVGGQ--------------------ECLDQRL  245 (304)
Q Consensus       215 ~~~----~~~~~~---------~~~~s--~DV~S--------------~~~~~--------------------~~~~~~~  245 (304)
                      ...    ....++         .+.++  +||||              |....                    ..+++.+
T Consensus       186 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (307)
T 2nru_A          186 FAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM  265 (307)
T ss_dssp             CSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC
T ss_pred             ccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc
Confidence            322    111222         12233  89999              11111                    0111111


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          246 YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       246 ~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                          ...+...+..+.+++.+||+     .||.+|||+.+++++|+++.+
T Consensus       266 ----~~~~~~~~~~l~~li~~cl~-----~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          266 ----NDADSTSVEAMYSVASQCLH-----EKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             ----SCCCHHHHHHHHHHHHHHTC-----SSTTTSCCHHHHHHHHHHHC-
T ss_pred             ----cccchHHHHHHHHHHHHHcC-----CCcccCcCHHHHHHHHHHHhc
Confidence                33456778889999999999     999999999999999998854

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-35  Score=262.85  Aligned_cols=212  Identities=21%  Similarity=0.228  Sum_probs=169.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||+|+++....     ...+.+|.. ++.++||||+++++++.+. ..
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-~~   80 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSR---HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA-QQ   80 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS-SE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC-CE
Confidence            468999999999999999999876   4579999999975432     125666777 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.+|.+||+|||+++..
T Consensus        81 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~  156 (318)
T 1fot_A           81 IFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV  156 (318)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             EEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceec
Confidence            599999999999999998766 799999999999999999999654   8999999999999999999999999999876


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..... ..+++          ...++  +||||              |....      .+....     ..++...+..+
T Consensus       157 ~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~p~~~~~~~  230 (318)
T 1fot_A          157 PDVTY-TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE-----LRFPPFFNEDV  230 (318)
T ss_dssp             SSCBC-CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC-----CCCCTTSCHHH
T ss_pred             CCccc-cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----CCCCCCCCHHH
Confidence            54322 22233          12223  89999              21111      122222     23455667889


Q ss_pred             HHHHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      .+++.+||.     .||++||     ++.++++|
T Consensus       231 ~~li~~lL~-----~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          231 KDLLSRLIT-----RDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             HHHHHHHTC-----SCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHHhc-----cCHHHcCCCcCCCHHHHhcC
Confidence            999999999     9999999     89999875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.7e-35  Score=259.43  Aligned_cols=227  Identities=15%  Similarity=0.148  Sum_probs=174.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++........+.+|+. ++.+ +|+|++++++++.... ..++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-~~~lv   84 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNL---LNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-HNVLV   84 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEET---TTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-EEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEEC---CCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc-eeEEE
Confidence            358999999999999999999865   4679999999976655556777777 8888 8999999999998774 44999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC-----eeEcccccccc
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN-----AKLAGFGAANY  211 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~-----~kl~Dfgla~~  211 (304)
                      |||+ +++|.+++...+.++++..++.++.|++.||+|||+.   +|+||||||+|||++.++.     +||+|||+++.
T Consensus        85 ~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           85 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             EEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            9999 8899999998766799999999999999999999654   8999999999999987776     99999999987


Q ss_pred             cCCCCC---------Cccccc----------Ccccc--ccccc--------------CCCCc---------ceeccccCC
Q 046594          212 CSGGSN---------RRNCEK----------TSEMA--EDIND--------------FVGGQ---------ECLDQRLYI  247 (304)
Q Consensus       212 ~~~~~~---------~~~~~~----------~~~~s--~DV~S--------------~~~~~---------~~~~~~~~~  247 (304)
                      ......         ....++          ...++  +||||              |....         .+.......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  240 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence            654322         111222          22233  89999              21110         000000000


Q ss_pred             CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          248 PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       248 ~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      +........+..+.+++.+||+     .||++|||+.++++.|+++.+...
T Consensus       241 ~~~~~~~~~~~~l~~li~~~l~-----~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          241 PLRELCAGFPEEFYKYMHYARN-----LAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHH-----CCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHhhCcHHHHHHHHHHhc-----CCcccCCCHHHHHHHHHHHHHhcC
Confidence            0111222456789999999999     999999999999999999987543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.3e-36  Score=261.12  Aligned_cols=217  Identities=18%  Similarity=0.255  Sum_probs=167.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+.   .++..+|+|++......     ..+.+|+. ++.++||||+++++++.+.+ .
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   83 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT-R   83 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-E
T ss_pred             cccEEEeeEEecCCCeEEEEEEEc---cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC-E
Confidence            468999999999999999999876   35789999998654322     26777787 99999999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .++||||+++|+|.+++.... .+++..++.++.|++.||+|||+   .|++||||||+|||++.++.++|+|||++...
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           84 VYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            599999999999999998776 79999999999999999999965   48999999999999999999999999998765


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .........++          ....+  +||||              |....  +... .+......++...+..+.+++
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li  238 (279)
T 3fdn_A          160 PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK-RISRVEFTFPDFVTEGARDLI  238 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HHHHTCCCCCTTSCHHHHHHH
T ss_pred             CcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHH-HHHhCCCCCCCcCCHHHHHHH
Confidence            44332222222          12222  89999              21111  1100 000012344555678899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||+     .||.+|||+.|+++|
T Consensus       239 ~~~l~-----~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          239 SRLLK-----HNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHCC-----SSGGGSCCHHHHHHC
T ss_pred             HHHhc-----cChhhCCCHHHHhhC
Confidence            99999     999999999999986

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=7.8e-36  Score=271.11  Aligned_cols=216  Identities=16%  Similarity=0.165  Sum_probs=169.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||+|++......     ..+.+|+. ++.++||||+++++++.+.+ .
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~---~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-~   89 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKN---DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE-D   89 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-E
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-E
Confidence            468999999999999999999876   35789999998754321     25666777 99999999999999999874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++..
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A           90 MFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             EEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeec
Confidence            599999999999999998765 799999999999999999999765   8999999999999999999999999999877


Q ss_pred             CCCCC-CcccccC-------------cccc--ccccc--------------CCCCc-----ceeccccCCCCCCcchHHH
Q 046594          213 SGGSN-RRNCEKT-------------SEMA--EDIND--------------FVGGQ-----ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       213 ~~~~~-~~~~~~~-------------~~~s--~DV~S--------------~~~~~-----~~~~~~~~~~~~~~~~~~~  257 (304)
                      ..... ....++.             ..++  +||||              |....     ++.. .+......++...+
T Consensus       166 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~-~~~~~~~~~p~~~s  244 (384)
T 4fr4_A          166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH-TFETTVVTYPSAWS  244 (384)
T ss_dssp             CTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH-HHHHCCCCCCTTSC
T ss_pred             cCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH-HHhhcccCCCCcCC
Confidence            54433 2223331             1133  89999              21111     1100 00001234566677


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCC-HHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPK-IVDVLS  288 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps-~~~vl~  288 (304)
                      ..+.+++.+||+     .||.+||+ +.++++
T Consensus       245 ~~~~~li~~lL~-----~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          245 QEMVSLLKKLLE-----PNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHHHHSC-----SSGGGSCCSHHHHHT
T ss_pred             HHHHHHHHHHhc-----CCHhHhcccHHHHHc
Confidence            889999999999     99999998 666664

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.5e-35  Score=263.93  Aligned_cols=220  Identities=18%  Similarity=0.165  Sum_probs=163.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc------hhHHHHHHH-hhCCCCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS------QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.....+++.+|+|+++....      ...+.+|+. ++.++||||+++++++...+ 
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-   94 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG-   94 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence            4689999999999999999988754445789999999976431      115666777 99999999999999998874 


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++.
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A           95 KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence            4599999999999999998766 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          212 CSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       212 ~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ......  ....++          ...++  +||||              |....  +...... .....++...+..+.
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~  249 (327)
T 3a62_A          171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL-KCKLNLPPYLTQEAR  249 (327)
T ss_dssp             --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-HTCCCCCTTSCHHHH
T ss_pred             cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hCCCCCCCCCCHHHH
Confidence            533222  222233          12223  89999              22111  1111111 001244556678899


Q ss_pred             HHHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      +++.+||.     .||++||     ++.++++|
T Consensus       250 ~li~~~L~-----~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          250 DLLKKLLK-----RNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             HHHHHHSC-----SCGGGSTTSSTTTHHHHHHS
T ss_pred             HHHHHHHh-----cCHhhccCCCCCCHHHHHcC
Confidence            99999999     9999999     78888875

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=8.7e-36  Score=268.02  Aligned_cols=220  Identities=18%  Similarity=0.149  Sum_probs=167.6

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEecccc-------chhHHHHHHH-hhCCCCCcccceeeeeeC
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA-------SQTKLEEEIL-LKSSSHLNIVTLLGYPQD  128 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~e~~-l~~l~h~niv~~~~~~~~  128 (304)
                      .+..+|++.+.||+|+||.||++.++   .+++.||||++....       ....+.+|+. ++.++||||+++++++..
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~   97 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINR---ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS   97 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEEC---CCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            34678999999999999999999876   457999999986432       1236777888 999999999999999988


Q ss_pred             CCCceEEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC---ee
Q 046594          129 GLQRRCLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN---AK  202 (304)
Q Consensus       129 ~~~~~~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~---~k  202 (304)
                      . ..+|+||||+++|+|.+.+...   +..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.   +|
T Consensus        98 ~-~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vk  173 (351)
T 3c0i_A           98 D-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVK  173 (351)
T ss_dssp             T-TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEE
T ss_pred             C-CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEE
Confidence            7 4559999999999998877643   22689999999999999999999765   8999999999999986654   99


Q ss_pred             EcccccccccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc-ce----eccccCCCC
Q 046594          203 LAGFGAANYCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ-EC----LDQRLYIPN  249 (304)
Q Consensus       203 l~Dfgla~~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~-~~----~~~~~~~~~  249 (304)
                      |+|||++........  ....++          ...++  +||||              |.... +.    ....... .
T Consensus       174 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~-~  252 (351)
T 3c0i_A          174 LGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKM-N  252 (351)
T ss_dssp             ECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCC-C
T ss_pred             EecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCC-C
Confidence            999999987765432  222333          12233  89999              22111 11    1111100 0


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .......+..+.+++.+||.     .||++|||+.++++|
T Consensus       253 ~~~~~~~s~~~~~li~~~L~-----~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          253 PRQWSHISESAKDLVRRMLM-----LDPAERITVYEALNH  287 (351)
T ss_dssp             HHHHTTSCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             ccccccCCHHHHHHHHHHCC-----CChhHCcCHHHHhcC
Confidence            01112346789999999999     999999999999874

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-35  Score=257.43  Aligned_cols=218  Identities=18%  Similarity=0.189  Sum_probs=166.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||+|.+......     ..+.+|+. +++++||||+++++++.+. +.
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~   85 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESI---HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS-NY   85 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS-SE
T ss_pred             cccceeeeeecCCCceEEEEEEEc---cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC-Ce
Confidence            568999999999999999999875   35789999999754321     26677777 9999999999999999887 44


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .++||||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++...
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL  162 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence            5999999999999999988766899999999999999999999765   8999999999999999999999999999876


Q ss_pred             CCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ....++          ....+  +||||              |....  +...... ......+...+..+.+
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  241 (278)
T 3cok_A          163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-LADYEMPSFLSIEAKD  241 (278)
T ss_dssp             C----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC-SSCCCCCTTSCHHHHH
T ss_pred             cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh-hcccCCccccCHHHHH
Confidence            53221  111111          11222  99999              11111  1111111 1112344556788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||+     .||++|||+.++++|
T Consensus       242 li~~~l~-----~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          242 LIHQLLR-----RNPADRLSLSSVLDH  263 (278)
T ss_dssp             HHHHHSC-----SSGGGSCCHHHHTTS
T ss_pred             HHHHHcc-----cCHhhCCCHHHHhcC
Confidence            9999999     999999999999874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.5e-35  Score=259.17  Aligned_cols=220  Identities=20%  Similarity=0.271  Sum_probs=161.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ++|++.+.||+|+||.||++.+.      ..+|+|+++......    .+.+|+. +++++||||+++++++... . ++
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~-~~   95 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWH------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-Q-LA   95 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESS------SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-S-CE
T ss_pred             cceeeeeEecCCCCeEEEEEEEc------CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC-c-cE
Confidence            48999999999999999998764      459999997554322    6777888 9999999999999976443 4 49


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++++|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++.....
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A           96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence            99999999999999987766899999999999999999999765   899999999999999999999999999976543


Q ss_pred             CCC----Cccccc-------------Ccccc--ccccc--------------CCCCc------cee-ccccCCCCCCcch
Q 046594          215 GSN----RRNCEK-------------TSEMA--EDIND--------------FVGGQ------ECL-DQRLYIPNEKFKI  254 (304)
Q Consensus       215 ~~~----~~~~~~-------------~~~~s--~DV~S--------------~~~~~------~~~-~~~~~~~~~~~~~  254 (304)
                      ...    ....++             ...++  +||||              |....      +.+ .............
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (289)
T 3og7_A          173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS  252 (289)
T ss_dssp             -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCT
T ss_pred             ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccc
Confidence            211    111111             12223  89999              21111      011 1111111123445


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      .++..+.+++.+||+     .||.+|||+.++++.|+++.+
T Consensus       253 ~~~~~l~~li~~~l~-----~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          253 NCPKRMKRLMAECLK-----KKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             TSCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHTTC
T ss_pred             cCCHHHHHHHHHHcc-----CChhhCCCHHHHHHHHHHHhh
Confidence            667889999999999     999999999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.7e-35  Score=260.72  Aligned_cols=214  Identities=20%  Similarity=0.216  Sum_probs=166.8

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .|+..+.||+|+||.||++.++   .+|+.||||++......  ..+.+|+. +++++||||+++++++...+. +++||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~---~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv~  121 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREK---HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE-LWVLM  121 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE-EEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEEC---CCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCE-EEEEE
Confidence            4777889999999999999875   35799999999765433  26677777 999999999999999988754 59999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++|+|.+++...  .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++........
T Consensus       122 e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~  196 (321)
T 2c30_A          122 EFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP  196 (321)
T ss_dssp             CCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred             ecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc
Confidence            999999999998754  699999999999999999999764   899999999999999999999999999987654332


Q ss_pred             --Cccccc----------Ccccc--ccccc--------------CCCCc--ceec---cccCCCCCCcchHHHHHHHHHH
Q 046594          218 --RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLD---QRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       218 --~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~---~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                        ....++          ...++  +||||              |....  +...   ... .+....+...+..+.+++
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li  275 (321)
T 2c30_A          197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP-PPKLKNSHKVSPVLRDFL  275 (321)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS-CCCCTTGGGSCHHHHHHH
T ss_pred             ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCcCccccCCHHHHHHH
Confidence              222233          22233  89999              11111  1100   000 001122345567899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||+     .||++|||+.++++|
T Consensus       276 ~~~l~-----~dp~~Rps~~ell~h  295 (321)
T 2c30_A          276 ERMLV-----RDPQERATAQELLDH  295 (321)
T ss_dssp             HHHSC-----SSTTTSCCHHHHHTS
T ss_pred             HHHcc-----CChhhCcCHHHHhcC
Confidence            99999     999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.5e-35  Score=262.19  Aligned_cols=231  Identities=22%  Similarity=0.185  Sum_probs=170.4

Q ss_pred             HHhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .++|++.+.||+|+||.||++.+.+.  ..++..||||.+.......   .+.+|+. +++++||||+++++++...+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            46899999999999999999986542  2467899999997543332   6667777 9999999999999999887555


Q ss_pred             eEEEEeecCCCChhhHhhhcC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeE
Q 046594          133 RCLVFEFMQRGSLRWNLREKG------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKL  203 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl  203 (304)
                       ++||||+++|+|.+++....      ..+++..++.++.|++.||+|||+.   +++||||||+|||++.   +..+||
T Consensus       109 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          109 -FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             -EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             -EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence             99999999999999998764      2589999999999999999999765   8999999999999994   446999


Q ss_pred             cccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CC----CCc-----ceeccccCCCCC
Q 046594          204 AGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FV----GGQ-----ECLDQRLYIPNE  250 (304)
Q Consensus       204 ~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~----~~~-----~~~~~~~~~~~~  250 (304)
                      +|||++........    ....++          ...++  +||||        ..    +..     +..+........
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~  264 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM  264 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC
Confidence            99999976533222    111111          22223  99999        11    111     111111000023


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ..+...+..+.+++.+||+     .||.+|||+.+++++|+.+.....
T Consensus       265 ~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~ll~~l~~~~~~~~  307 (327)
T 2yfx_A          265 DPPKNCPGPVYRIMTQCWQ-----HQPEDRPNFAIILERIEYCTQDPD  307 (327)
T ss_dssp             CCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             CCCCCCCHHHHHHHHHHhc-----CChhhCcCHHHHHHHHHHHhcCHH
Confidence            3445667889999999999     999999999999999999887554

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.3e-35  Score=261.51  Aligned_cols=228  Identities=18%  Similarity=0.208  Sum_probs=174.9

Q ss_pred             HHhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .++|++.+.||+|+||.||++.+++..  ..+..||+|.+.......   .+.+|+. ++.++||||+++++++.+.+..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            358999999999999999999887532  236789999998654433   5677777 9999999999999999887555


Q ss_pred             eEEEEeecCCCChhhHhhhcC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          133 RCLVFEFMQRGSLRWNLREKG---------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                       ++||||+++|+|.+++....         ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||
T Consensus       104 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl  179 (322)
T 1p4o_A          104 -LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI  179 (322)
T ss_dssp             -EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEE
T ss_pred             -EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEE
Confidence             99999999999999987632         2679999999999999999999765   8999999999999999999999


Q ss_pred             cccccccccCCCCC----Cccccc----------Ccccc--ccccc--------C----CCCc-----ceeccccCCCCC
Q 046594          204 AGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------F----VGGQ-----ECLDQRLYIPNE  250 (304)
Q Consensus       204 ~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~----~~~~-----~~~~~~~~~~~~  250 (304)
                      +|||+++.......    ....++          ...++  +||||        .    .+..     +...........
T Consensus       180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~  259 (322)
T 1p4o_A          180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL  259 (322)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCC
T ss_pred             CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcC
Confidence            99999986644322    111111          12233  89999        1    1111     111110000012


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ..+...+..+.+++.+||+     .||.+|||+.+++++|+++.+
T Consensus       260 ~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          260 DKPDNCPDMLFELMRMCWQ-----YNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             CCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCCCCCCHHHHHHHHHHcC-----CCcccCcCHHHHHHHHHHhhc
Confidence            3445667889999999999     999999999999999988754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=4.1e-35  Score=256.58  Aligned_cols=223  Identities=18%  Similarity=0.187  Sum_probs=172.0

Q ss_pred             Hhhcccc-ccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLK-SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~-~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+ .||+|+||.||++.+... ..+..||||++......    ..+.+|+. ++.++||||+++++++..  +.+
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~   92 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMK-KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESW   92 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECS-SSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES--SSE
T ss_pred             hhhhhccCccccccCeeeEeeeecCC-CceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC--CCc
Confidence            5788888 999999999999965432 35689999999765322    26777888 999999999999999943  345


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++....
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR  168 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence            99999999999999998765 799999999999999999999765   89999999999999999999999999998775


Q ss_pred             CCCC-----Cccccc----------Ccccc--ccccc--------CCCCc------------ceeccccCCCCCCcchHH
Q 046594          214 GGSN-----RRNCEK----------TSEMA--EDIND--------FVGGQ------------ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       214 ~~~~-----~~~~~~----------~~~~s--~DV~S--------~~~~~------------~~~~~~~~~~~~~~~~~~  256 (304)
                      ....     ....++          ...++  +||||        ...+.            ..+....   ....+...
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~  245 (291)
T 1xbb_A          169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE---RMGCPAGC  245 (291)
T ss_dssp             TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTC
T ss_pred             cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCC
Confidence            4432     001111          11223  99999        11011            1111111   23445667


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +..+.+++.+||+     .||.+|||+.++++.|+++....
T Consensus       246 ~~~l~~li~~~l~-----~dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          246 PREMYDLMNLCWT-----YDVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             CHHHHHHHHHHTC-----SSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcC-----CChhhCcCHHHHHHHHHHHHHHH
Confidence            7889999999999     99999999999999999987644

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.9e-35  Score=257.24  Aligned_cols=216  Identities=14%  Similarity=0.121  Sum_probs=166.5

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.||+|.+......    ..+.+|+. +..+ +||||+++++++.+.+ 
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~-   84 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKR---LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD-   84 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT-
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEc---CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-
Confidence            4678999999999999999999875   35799999998854322    14555555 7777 9999999999998874 


Q ss_pred             ceEEEEeecCCCChhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC----------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL----------  198 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~----------  198 (304)
                      .+++||||+++|+|.+++....   ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.+          
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~  161 (289)
T 1x8b_A           85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEG  161 (289)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------
T ss_pred             eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccc
Confidence            4599999999999999998652   3799999999999999999999765   89999999999999844          


Q ss_pred             ---------CCeeEcccccccccCCCCC-Cccccc--------Cccc--cccccc-------------CCCCc----cee
Q 046594          199 ---------CNAKLAGFGAANYCSGGSN-RRNCEK--------TSEM--AEDIND-------------FVGGQ----ECL  241 (304)
Q Consensus       199 ---------~~~kl~Dfgla~~~~~~~~-~~~~~~--------~~~~--s~DV~S-------------~~~~~----~~~  241 (304)
                               ..+||+|||++........ ..+..+        ....  .+||||             ++...    .+.
T Consensus       162 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~  241 (289)
T 1x8b_A          162 DEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIR  241 (289)
T ss_dssp             --------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHH
T ss_pred             ccccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHH
Confidence                     4799999999987765433 111111        1122  299999             11111    111


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ...    ....+...+..+.+++.+||+     .||++|||+.++++|
T Consensus       242 ~~~----~~~~~~~~~~~~~~li~~~l~-----~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          242 QGR----LPRIPQVLSQEFTELLKVMIH-----PDPERRPSAMALVKH  280 (289)
T ss_dssp             TTC----CCCCSSCCCHHHHHHHHHHTC-----SSGGGSCCHHHHHTC
T ss_pred             cCC----CCCCCcccCHHHHHHHHHHhC-----CCcccCCCHHHHhhC
Confidence            111    234555667889999999999     999999999999875

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.2e-35  Score=257.93  Aligned_cols=216  Identities=20%  Similarity=0.197  Sum_probs=164.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++.+.||+|+||.||++.+    .+++.+|+|++......    ..+.+|+. +++++||||+++++++...+ .++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   76 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN----NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-RLV   76 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE----TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-CEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc----CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-eEE
Confidence            4799999999999999999976    35789999999765433    26667788 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++ +|.+++....+.+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  152 (288)
T 1ob3_A           77 LVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (288)
T ss_dssp             EEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             EEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence            99999986 99999987766899999999999999999999765   899999999999999999999999999986643


Q ss_pred             CCC--Cccccc-----------Ccccc--ccccc--------------CCCCc------ce-------------------
Q 046594          215 GSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ------EC-------------------  240 (304)
Q Consensus       215 ~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~-------------------  240 (304)
                      ...  ....++           ...++  +||||              |....      .+                   
T Consensus       153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T 1ob3_A          153 PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP  232 (288)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             cccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccc
Confidence            221  111111           12233  89999              21111      00                   


Q ss_pred             -eccccCC----CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          241 -LDQRLYI----PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       241 -~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                       .++.+..    +...+....+..+.+++.+||+     .||++|||+.|+++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK-----LDPNQRITAKQALEH  281 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHcC-----CCcccCCCHHHHhcC
Confidence             0000000    0001123356788999999999     999999999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=2e-35  Score=258.47  Aligned_cols=230  Identities=15%  Similarity=0.129  Sum_probs=171.8

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+..+|++.+.||+|+||.||++.+.   .+++.||||+.........+..|.. ++.++|++++..++.+...+...++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l   82 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDI---AAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM   82 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEc---CCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence            44679999999999999999999875   3578999999776655556777777 9999999988888887666567799


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee---CCCCCeeEccccccccc
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL---DELCNAKLAGFGAANYC  212 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfgla~~~  212 (304)
                      ||||+ +++|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||+   +.++.+||+|||+++..
T Consensus        83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            99999 8899999987666899999999999999999999765   89999999999999   78899999999999876


Q ss_pred             CCCCC---------CcccccC----------cccc--ccccc--------------CCCCc---------ceeccccCCC
Q 046594          213 SGGSN---------RRNCEKT----------SEMA--EDIND--------------FVGGQ---------ECLDQRLYIP  248 (304)
Q Consensus       213 ~~~~~---------~~~~~~~----------~~~s--~DV~S--------------~~~~~---------~~~~~~~~~~  248 (304)
                      .....         ....++.          ..++  +||||              |....         .+.......+
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence            54322         1112221          1223  89999              21111         0001111000


Q ss_pred             CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          249 NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       249 ~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ........+..+.+++.+||+     .||++|||+.++++.|+++.+...
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~-----~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          239 IEVLCKGYPSEFATYLNFCRS-----LRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHT-----SCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             hhhhhccCCHHHHHHHHHHHh-----cCCCCCCCHHHHHHHHHHHHHHhC
Confidence            001112336789999999999     999999999999999999987554

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=3.3e-35  Score=255.37  Aligned_cols=222  Identities=20%  Similarity=0.221  Sum_probs=174.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.+.    ++..||+|.+...... ..+.+|+. ++.++||||+++++++..+ . .++|
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~-~~~v   85 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-P-IYII   85 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-S-CEEE
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc----CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCC-C-cEEE
Confidence            357999999999999999998764    4578999999765433 37777888 9999999999999998754 3 4999


Q ss_pred             EeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++..... .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++......
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  162 (279)
T 1qpc_A           86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN  162 (279)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence            999999999999976532 699999999999999999999765   8999999999999999999999999999877543


Q ss_pred             CC---Cccccc----------Ccccc--ccccc--------CCCCc---------ce---eccccCCCCCCcchHHHHHH
Q 046594          216 SN---RRNCEK----------TSEMA--EDIND--------FVGGQ---------EC---LDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~---~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~---~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..   ....++          ...++  +||||        ...+.         +.   +....   ....+...+..+
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l  239 (279)
T 1qpc_A          163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY---RMVRPDNCPEEL  239 (279)
T ss_dssp             CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTCCHHH
T ss_pred             ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhccc---CCCCcccccHHH
Confidence            32   111111          12233  89999        11011         11   11111   223445567889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      .+++.+||+     .||++|||+.++++.|+.+....
T Consensus       240 ~~li~~~l~-----~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          240 YQLMRLCWK-----ERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             HHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhc-----cChhhCCCHHHHHHHHHHHHHhc
Confidence            999999999     99999999999999999987643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2.3e-35  Score=258.31  Aligned_cols=229  Identities=15%  Similarity=0.118  Sum_probs=176.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++........+.+|+. ++.++|+++++.++++...+...++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDI---AAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET---TTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEc---CCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            468999999999999999999875   4679999999887665567777787 999999998888887766656679999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC---CCCCeeEcccccccccCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD---ELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~---~~~~~kl~Dfgla~~~~~  214 (304)
                      ||+ +++|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++   .++.+||+|||++.....
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  160 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence            999 8899999986666899999999999999999999765   899999999999994   788999999999987654


Q ss_pred             CCC---------Cccccc----------Ccccc--ccccc--------------CCCCc---------ceeccccCCCCC
Q 046594          215 GSN---------RRNCEK----------TSEMA--EDIND--------------FVGGQ---------ECLDQRLYIPNE  250 (304)
Q Consensus       215 ~~~---------~~~~~~----------~~~~s--~DV~S--------------~~~~~---------~~~~~~~~~~~~  250 (304)
                      ...         ....++          ...++  +||||              |....         .+.......+..
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (296)
T 3uzp_A          161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE  240 (296)
T ss_dssp             TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred             cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH
Confidence            322         111222          22233  89999              21110         011111100001


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                      ..+...+..+.+++.+||+     .||++|||+.++++.|+++......
T Consensus       241 ~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~l~~~l~~~~~~~~~  284 (296)
T 3uzp_A          241 VLCKGYPSEFATYLNFCRS-----LRFDDKPDYSYLRQLFRNLFHRQGF  284 (296)
T ss_dssp             HHTTTSCHHHHHHHHHHHT-----SCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             HHHhhCCHHHHHHHHHHHh-----cCcCcCCCHHHHHHHHHHHHHhcCC
Confidence            1123446789999999999     9999999999999999998776543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=3.4e-35  Score=255.07  Aligned_cols=218  Identities=18%  Similarity=0.144  Sum_probs=170.2

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +.++|++.+.||+|+||.||++.++.   ++..+|+|++......  ..+.+|+. +++++||||+++++++.+. ...+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~   82 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKG---TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN-TDIY   82 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-SEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCC---CCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeEE
Confidence            46789999999999999999998763   4689999998764333  37777888 9999999999999999887 4459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee---CCCCCeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL---DELCNAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfgla~~  211 (304)
                      +||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+|||+   +.++.++|+|||++..
T Consensus        83 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A           83 LVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             EEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence            9999999999999988766 799999999999999999999765   89999999999999   7889999999999987


Q ss_pred             cCCCCC-Cccccc---------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcch----HHHHH
Q 046594          212 CSGGSN-RRNCEK---------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKI----TSLAK  259 (304)
Q Consensus       212 ~~~~~~-~~~~~~---------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~----~~~~~  259 (304)
                      ...... ....++         .+.++  +||||              |....  +...... .....++.    ..+..
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  237 (277)
T 3f3z_A          159 FKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIR-EGTFTFPEKDWLNVSPQ  237 (277)
T ss_dssp             CCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCHHHHTTSCHH
T ss_pred             ccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hCCCCCCchhhhcCCHH
Confidence            655433 222233         22233  89999              21111  1111000 00112222    35678


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+++.+||+     .||++|||+.++++|
T Consensus       238 ~~~li~~~l~-----~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          238 AESLIRRLLT-----KSPKQRITSLQALEH  262 (277)
T ss_dssp             HHHHHHHHTC-----SSTTTSCCHHHHTTS
T ss_pred             HHHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            9999999999     999999999999975

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.5e-35  Score=266.48  Aligned_cols=216  Identities=16%  Similarity=0.166  Sum_probs=170.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||+|++......     ..+.+|.. ++.++||||+++++++.+. ..
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~  115 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN-SN  115 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-SE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEEC---CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC-CE
Confidence            467999999999999999999876   35799999998754321     25666777 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       116 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~  191 (350)
T 1rdq_E          116 LYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceec
Confidence            599999999999999998876 799999999999999999999764   8999999999999999999999999999876


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ..... ...++          ...++  +||||              |....  ++..... .....++...+..+.+++
T Consensus       192 ~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~li  269 (350)
T 1rdq_E          192 KGRTW-TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPSHFSSDLKDLL  269 (350)
T ss_dssp             SSCBC-CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTCCHHHHHHH
T ss_pred             cCCcc-cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHH
Confidence            54332 22222          12223  99999              22111  1111110 012245556678899999


Q ss_pred             HHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      .+||+     .||.+||+     +.++++|
T Consensus       270 ~~lL~-----~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          270 RNLLQ-----VDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHHSC-----SCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHhh-----cCHHhccCCccCCHHHHHhC
Confidence            99999     99999998     8888875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.1e-35  Score=276.13  Aligned_cols=221  Identities=19%  Similarity=0.170  Sum_probs=170.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..+|++.+.||+|+||.||++.+.    ++..||||+++..... +.+.+|+. +++++||||+++++++..  ..+++|
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv  256 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIV  256 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET----TTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEE
T ss_pred             hhHceeeeeecCCCCeEEEEEEEC----CCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEE
Confidence            357888999999999999999875    3467999999865433 37777888 999999999999999876  334999


Q ss_pred             EeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||+++|+|.+++.... ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  333 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN  333 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence            99999999999997542 3699999999999999999999764   8999999999999999999999999999876543


Q ss_pred             CC---Cccccc----------Ccccc--ccccc--------CC----CCc-----ce---eccccCCCCCCcchHHHHHH
Q 046594          216 SN---RRNCEK----------TSEMA--EDIND--------FV----GGQ-----EC---LDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       216 ~~---~~~~~~----------~~~~s--~DV~S--------~~----~~~-----~~---~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..   ....++          .+.++  +||||        ..    +..     ++   +....   +...+..++..+
T Consensus       334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l  410 (452)
T 1fmk_A          334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---RMPCPPECPESL  410 (452)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTSCHHH
T ss_pred             ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHH
Confidence            22   111111          22233  99999        11    111     11   11122   234556778889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      .+++.+||+     .||++|||+.++++.|+.+...
T Consensus       411 ~~li~~cl~-----~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          411 HDLMCQCWR-----KEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHHTC-----SSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHHcc-----CChhhCcCHHHHHHHHHHHhcc
Confidence            999999999     9999999999999999988643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=3.6e-35  Score=256.33  Aligned_cols=215  Identities=20%  Similarity=0.198  Sum_probs=162.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++   .++..+|+|++......   ..+..|+. +++++||||+++++++.+.+ .++
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   96 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEER---SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-NMY   96 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-EEE
T ss_pred             hhheeecceeccCCCeEEEEEEEc---cCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC-eEE
Confidence            468999999999999999999875   45789999998765433   37777888 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee---CCCCCeeEccccc
Q 046594          135 LVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL---DELCNAKLAGFGA  208 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfgl  208 (304)
                      +||||+++|+|.+.+...   +..+++..++.++.|++.||+|||+.   +|+||||||+|||+   +.++.+||+|||+
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~  173 (285)
T 3is5_A           97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL  173 (285)
T ss_dssp             EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred             EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence            999999999999988643   23799999999999999999999765   89999999999999   4567899999999


Q ss_pred             ccccCCCCC-Cccccc---------Ccccc--ccccc--------------CCCCc--cee------ccccCCCCCCcch
Q 046594          209 ANYCSGGSN-RRNCEK---------TSEMA--EDIND--------------FVGGQ--ECL------DQRLYIPNEKFKI  254 (304)
Q Consensus       209 a~~~~~~~~-~~~~~~---------~~~~s--~DV~S--------------~~~~~--~~~------~~~~~~~~~~~~~  254 (304)
                      +........ ....++         .+.++  +||||              |....  +..      .+..    .....
T Consensus       174 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~  249 (285)
T 3is5_A          174 AELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY----AVECR  249 (285)
T ss_dssp             CCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC----CC--C
T ss_pred             ceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccc----ccccC
Confidence            987654433 222222         22223  89999              21111  000      0111    01111


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..++.+.+++.+||+     .||++|||+.|+++|
T Consensus       250 ~~~~~~~~li~~~L~-----~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          250 PLTPQAVDLLKQMLT-----KDPERRPSAAQVLHH  279 (285)
T ss_dssp             CCCHHHHHHHHHHTC-----SCTTTSCCHHHHHTS
T ss_pred             cCCHHHHHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            245778899999999     999999999999874

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=5.9e-36  Score=277.45  Aligned_cols=218  Identities=16%  Similarity=0.181  Sum_probs=164.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc---h--hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---Q--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||||++.....   .  ..+.+|+. ++.++||||+++++++...+ .
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~-~  222 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEK---ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-R  222 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-E
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEc---CCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-E
Confidence            467999999999999999999876   4579999999975421   1  15566777 99999999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.  .||+||||||+|||++.++.+||+|||+++..
T Consensus       223 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~  299 (446)
T 4ejn_A          223 LCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEG  299 (446)
T ss_dssp             EEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred             EEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence            599999999999999998766 799999999999999999999862  38999999999999999999999999999865


Q ss_pred             CCCCC--CcccccC----------cccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEKT----------SEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~~----------~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ....++.          ..++  +||||              |....  ....... .....++...+..+.+
T Consensus       300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~  378 (446)
T 4ejn_A          300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEEIRFPRTLGPEAKS  378 (446)
T ss_dssp             CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHHH
T ss_pred             cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH-hCCCCCCccCCHHHHH
Confidence            43322  2333332          2233  89999              21111  1111110 0122455666788999


Q ss_pred             HHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      ++.+||+     .||.+||     |+.|+++|
T Consensus       379 li~~~L~-----~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          379 LLSGLLK-----KDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             HHHHHTC-----SSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHcc-----cCHHHhCCCCCCCHHHHHhC
Confidence            9999999     9999999     99999875

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.3e-35  Score=266.63  Aligned_cols=217  Identities=18%  Similarity=0.148  Sum_probs=156.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|++.+.||+|+||.||++.++.   +++.||||++........+.+|+. +++++||||+++++++...+ .+++||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~  127 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKG---TQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPT-EISLVL  127 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSS-EEEEEE
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECC---CCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCC-eEEEEE
Confidence            3579999999999999999998863   468999999987655557777887 99999999999999998874 459999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEcccccccccCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGAANYCSG  214 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfgla~~~~~  214 (304)
                      ||+++|+|.+++...+ .+++..++.++.|++.||+|||+.   +|+||||||+|||++.   ++.+||+|||+++....
T Consensus       128 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          128 ELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             CCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             EeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            9999999999998765 799999999999999999999765   8999999999999975   88999999999987654


Q ss_pred             CCC-Cccccc----------Ccccc--ccccc--------------CCCCc-------ceeccccCCCCCCcchHHHHHH
Q 046594          215 GSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ-------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       215 ~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ... ....++          ...++  +||||              |....       .+...... .........+..+
T Consensus       204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~  282 (349)
T 2w4o_A          204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-FISPWWDEVSLNA  282 (349)
T ss_dssp             ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC-CCTTTTTTSCHHH
T ss_pred             ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc-cCCchhhhCCHHH
Confidence            432 222222          22233  99999              11111       11111110 0112234566789


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+++.+||+     .||++|||+.|+++|
T Consensus       283 ~~li~~~L~-----~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          283 KDLVRKLIV-----LDPKKRLTTFQALQH  306 (349)
T ss_dssp             HHHHHTTSC-----SSGGGSCCHHHHHHS
T ss_pred             HHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            999999999     999999999999975

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.9e-35  Score=263.45  Aligned_cols=226  Identities=20%  Similarity=0.187  Sum_probs=174.8

Q ss_pred             HhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~  132 (304)
                      .+|++.+.||+|+||.||++.+.+..  ..+..||+|.+.......   .+.+|+. ++.+ +||||+++++++...+..
T Consensus        46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  125 (333)
T 2i1m_A           46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV  125 (333)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence            57899999999999999999876432  234589999998654332   6677777 9999 899999999999887554


Q ss_pred             eEEEEeecCCCChhhHhhhc-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC
Q 046594          133 RCLVFEFMQRGSLRWNLREK-------------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC  199 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~  199 (304)
                       ++||||+++|+|.+++...             ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++
T Consensus       126 -~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~  201 (333)
T 2i1m_A          126 -LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH  201 (333)
T ss_dssp             -EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred             -EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence             9999999999999998754             22689999999999999999999765   899999999999999999


Q ss_pred             CeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------CCCCc-------------ceec
Q 046594          200 NAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------FVGGQ-------------ECLD  242 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~~~~~-------------~~~~  242 (304)
                      .+||+|||++........    ....++          ...++  +||||        ...+.             ....
T Consensus       202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  281 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK  281 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH
T ss_pred             eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh
Confidence            999999999986644332    111111          12233  99999        11111             1111


Q ss_pred             cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          243 QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       243 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      ...   ....+...+..+.+++.+||+     .||.+|||+.+++++|+.+....
T Consensus       282 ~~~---~~~~~~~~~~~l~~li~~~l~-----~~p~~Rps~~~l~~~L~~~~~~~  328 (333)
T 2i1m_A          282 DGY---QMAQPAFAPKNIYSIMQACWA-----LEPTHRPTFQQICSFLQEQAQED  328 (333)
T ss_dssp             HTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCCCCCCHHHHHHHHHHhc-----cChhhCcCHHHHHHHHHHHHHhh
Confidence            112   223344556889999999999     99999999999999999887643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=4e-35  Score=265.85  Aligned_cols=212  Identities=16%  Similarity=0.139  Sum_probs=161.2

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      .+.||+|+||.||++.+.   .+|+.||+|+++......  .+.+|+. +++++||||+++++++...+ .+++||||++
T Consensus        94 ~~~lG~G~~g~Vy~a~~~---~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-~~~lv~E~~~  169 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEET---ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN-DIVLVMEYVD  169 (373)
T ss_dssp             EEECC-----CEEEEEET---TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-EEEEEEECCT
T ss_pred             ceEEecCcCEEEEEEEEc---CCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-EEEEEEeCCC
Confidence            678999999999999875   357999999998754333  7778888 99999999999999998874 4599999999


Q ss_pred             CCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee--CCCCCeeEcccccccccCCCCC-C
Q 046594          142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL--DELCNAKLAGFGAANYCSGGSN-R  218 (304)
Q Consensus       142 ~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill--~~~~~~kl~Dfgla~~~~~~~~-~  218 (304)
                      +|+|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||+  +.++.+||+|||+++....... .
T Consensus       170 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~  246 (373)
T 2x4f_A          170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK  246 (373)
T ss_dssp             TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence            9999999877655799999999999999999999765   89999999999999  5678999999999987765443 2


Q ss_pred             ccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHHHHHHHHH
Q 046594          219 RNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAKLGDIEKW  266 (304)
Q Consensus       219 ~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~l~~~  266 (304)
                      ...++          ...++  +||||              |....      .+....... ........+..+.+++.+
T Consensus       247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~li~~  325 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL-EDEEFQDISEEAKEFISK  325 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCS-CSGGGTTSCHHHHHHHHT
T ss_pred             cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-ChhhhccCCHHHHHHHHH
Confidence            22333          22233  89999              22111      111111100 112223456889999999


Q ss_pred             hccccCCCCCCCCCCCHHHHHHH
Q 046594          267 CISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       267 cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ||+     .||.+|||+.|+++|
T Consensus       326 ~L~-----~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          326 LLI-----KEKSWRISASEALKH  343 (373)
T ss_dssp             TSC-----SSGGGSCCHHHHHHS
T ss_pred             HcC-----CChhhCCCHHHHhcC
Confidence            999     999999999999984

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.6e-35  Score=265.68  Aligned_cols=218  Identities=17%  Similarity=0.164  Sum_probs=166.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||+|++......     ..+..|.. ++++ +||||+++++++.+. .
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~-~   83 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLK---KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-S   83 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-S
T ss_pred             hhheEEEEEEEecCCeEEEEEEEC---CCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC-C
Confidence            468999999999999999999886   35789999999754321     14556666 7766 899999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||+++|+|.+++...+ .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~  159 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  159 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccc
Confidence            5599999999999999998766 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC--CcccccCc----------ccc--ccccc-----------CCCCc-------------ceeccccCCCCCCcc
Q 046594          212 CSGGSN--RRNCEKTS----------EMA--EDIND-----------FVGGQ-------------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       212 ~~~~~~--~~~~~~~~----------~~s--~DV~S-----------~~~~~-------------~~~~~~~~~~~~~~~  253 (304)
                      ......  ...+++..          .++  +||||           ..+..             ..+...+......+|
T Consensus       160 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p  239 (345)
T 3a8x_A          160 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP  239 (345)
T ss_dssp             SCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC
T ss_pred             ccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC
Confidence            432221  23333322          223  89999           11110             000000000123455


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCH------HHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKI------VDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~------~~vl~~  289 (304)
                      ...+..+.+++.+||+     .||.+||++      .++++|
T Consensus       240 ~~~s~~~~~li~~lL~-----~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          240 RSLSVKAASVLKSFLN-----KDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             TTSCHHHHHHHHHHTC-----SSTTTSTTCCTTTHHHHHHTS
T ss_pred             CCCCHHHHHHHHHHhc-----CCHhHCCCCCCcCCHHHHhcC
Confidence            6677889999999999     999999995      677654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=4.4e-36  Score=269.25  Aligned_cols=217  Identities=18%  Similarity=0.172  Sum_probs=166.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||+|+++....     ...+..|.. +..+ +||||+++++++.+. .
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~-~   91 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFK---KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK-E   91 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS-S
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC-C
Confidence            468999999999999999999986   3579999999975421     124444555 6655 999999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++.
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            5599999999999999998766 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC--CcccccCc----------ccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          212 CSGGSN--RRNCEKTS----------EMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       212 ~~~~~~--~~~~~~~~----------~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ......  ...+++..          .++  +||||              |....  ++... +......++...+..+.
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~-i~~~~~~~p~~~s~~~~  246 (345)
T 1xjd_A          168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS-IRMDNPFYPRWLEKEAK  246 (345)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHCCCCCCTTSCHHHH
T ss_pred             cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHH-HHhCCCCCCcccCHHHH
Confidence            533222  33334422          223  89999              22111  11111 10012345556678899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHH-HHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIV-DVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~-~vl~~  289 (304)
                      +++.+||.     .||++||++. ++++|
T Consensus       247 ~li~~lL~-----~dp~~R~~~~~~i~~h  270 (345)
T 1xjd_A          247 DLLVKLFV-----REPEKRLGVRGDIRQH  270 (345)
T ss_dssp             HHHHHHSC-----SSGGGSBTTBSCGGGS
T ss_pred             HHHHHHhc-----CCHhHcCCChHHHHcC
Confidence            99999999     9999999997 76643

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=4.5e-35  Score=259.95  Aligned_cols=218  Identities=20%  Similarity=0.201  Sum_probs=169.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--------hhHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--------QTKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.+|+|.+.....        ...+.+|+. +++++||||+++++++.+.
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   87 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREK---STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR   87 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hccEEEeeEeeecCCEEEEEEEEC---CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            578999999999999999999876   3578999999876432        226778888 9999999999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC----CeeEcc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC----NAKLAG  205 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~----~~kl~D  205 (304)
                      + .+++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+|||++.++    .+||+|
T Consensus        88 ~-~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D  162 (321)
T 2a2a_A           88 T-DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID  162 (321)
T ss_dssp             S-EEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred             C-EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence            4 4599999999999999998765 799999999999999999999765   899999999999999887    799999


Q ss_pred             cccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc--ceecccc---CCCCCCcc
Q 046594          206 FGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRL---YIPNEKFK  253 (304)
Q Consensus       206 fgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~---~~~~~~~~  253 (304)
                      ||++........ ....++          ...++  +||||              |....  +......   .......+
T Consensus       163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  242 (321)
T 2a2a_A          163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF  242 (321)
T ss_dssp             CTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHH
T ss_pred             CccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhh
Confidence            999987765433 222222          12233  89999              21111  1111100   00011122


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ...+..+.+++.+||.     .||++|||+.++++|
T Consensus       243 ~~~~~~~~~li~~~l~-----~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          243 SHTSELAKDFIRKLLV-----KETRKRLTIQEALRH  273 (321)
T ss_dssp             TTCCHHHHHHHHTTSC-----SSTTTSCCHHHHHHS
T ss_pred             cccCHHHHHHHHHHcC-----CChhhCcCHHHHhcC
Confidence            3456779999999999     999999999999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5e-35  Score=258.05  Aligned_cols=221  Identities=20%  Similarity=0.176  Sum_probs=161.2

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-------hhHHHHHHH-hhCC---CCCcccceeee
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-------QTKLEEEIL-LKSS---SHLNIVTLLGY  125 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~-l~~l---~h~niv~~~~~  125 (304)
                      .+..+|++.+.||+|+||.||++.++   .+++.||+|++.....       ...+.+|+. ++.+   +||||++++++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~   82 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDP---HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV   82 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECT---TTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEEC---CCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence            34679999999999999999999875   3579999999874331       113334444 4444   69999999999


Q ss_pred             eeCCCC----ceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC
Q 046594          126 PQDGLQ----RRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN  200 (304)
Q Consensus       126 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~  200 (304)
                      +.....    .+++||||++ |+|.+++..... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~  158 (308)
T 3g33_A           83 CATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT  158 (308)
T ss_dssp             EEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred             eeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence            976543    4699999997 599999987653 499999999999999999999765   7999999999999999999


Q ss_pred             eeEcccccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceec-----
Q 046594          201 AKLAGFGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLD-----  242 (304)
Q Consensus       201 ~kl~Dfgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~-----  242 (304)
                      +||+|||+++....... ....++          ...++  +||||              |....      .+.+     
T Consensus       159 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  238 (308)
T 3g33_A          159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP  238 (308)
T ss_dssp             EEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             EEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            99999999987654433 222222          22223  89999              11111      0000     


Q ss_pred             ------cccCCCC-----------CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 ------QRLYIPN-----------EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 ------~~~~~~~-----------~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                            .....+.           .....+.+..+.+++.+||+     .||++|||+.|+++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLT-----FNPHKRISAFRALQH  297 (308)
T ss_dssp             CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhc-----CCCccCCCHHHHhcC
Confidence                  0000000           00112345788999999999     999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=7.6e-35  Score=273.34  Aligned_cols=217  Identities=19%  Similarity=0.192  Sum_probs=165.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.++   ..+..+|+|++.....    ...+.+|+. ++.++||||+++++++.+.+ .+
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~  111 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDK---VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR-NY  111 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEET---TTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS-EE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEEC---CCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-EE
Confidence            468999999999999999999886   3578999999875432    226777787 99999999999999998874 45


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC---CCeeEccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL---CNAKLAGFGAAN  210 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~---~~~kl~Dfgla~  210 (304)
                      ++||||+++|+|.+.+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.+   +.+||+|||++.
T Consensus       112 ~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~  187 (494)
T 3lij_A          112 YLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA  187 (494)
T ss_dssp             EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence            99999999999999888766 799999999999999999999765   89999999999999764   559999999998


Q ss_pred             ccCCCCC-CcccccCc---------ccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHH
Q 046594          211 YCSGGSN-RRNCEKTS---------EMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       211 ~~~~~~~-~~~~~~~~---------~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~  258 (304)
                      ....... ....++..         .++  +||||              |....  +    +....... ........+.
T Consensus       188 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~  266 (494)
T 3lij_A          188 VFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF-DSPEWKNVSE  266 (494)
T ss_dssp             ECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-CSGGGTTSCH
T ss_pred             ECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CchhcccCCH
Confidence            7765443 22333322         223  89999              21111  1    11111100 1112234567


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+.+++.+||+     .||.+|||+.++++|
T Consensus       267 ~~~~li~~~L~-----~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          267 GAKDLIKQMLQ-----FDSQRRISAQQALEH  292 (494)
T ss_dssp             HHHHHHHHHTC-----SSTTTSCCHHHHHTC
T ss_pred             HHHHHHHHHCC-----CChhhCccHHHHhcC
Confidence            89999999999     999999999999976

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2e-35  Score=260.71  Aligned_cols=218  Identities=20%  Similarity=0.193  Sum_probs=163.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+.   .+|+.||+|++.......    .+.+|+. +++++||||+++++++...+ ..
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~   77 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNR---DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR-RL   77 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-EE
T ss_pred             cccceEeeEEeecCCeEEEEEEeC---CCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-eE
Confidence            578999999999999999999876   357899999987654432    5667777 99999999999999998874 45


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++++|.+++.... .+++..+..++.|++.||+|||+.   |++||||||+||+++.++.+||+|||++....
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A           78 HLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             EEEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence            99999999999998887665 799999999999999999999765   89999999999999999999999999998765


Q ss_pred             CCCC--Cccccc-----------Ccccc--ccccc--------------CCCCcc---------ee--------------
Q 046594          214 GGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQE---------CL--------------  241 (304)
Q Consensus       214 ~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~~---------~~--------------  241 (304)
                      ....  ....++           ...++  +||||              |.....         ..              
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (311)
T 4agu_A          154 GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN  233 (311)
T ss_dssp             ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred             CcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence            4322  111221           12233  89999              211110         00              


Q ss_pred             ----ccccCCCCCCc-----chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 ----DQRLYIPNEKF-----KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 ----~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                          ...+..+....     ....+..+.+++.+||+     .||++|||+.|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLH-----MDPTERLTCEQLLHH  285 (311)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCC-----SSTTTSCCHHHHHTS
T ss_pred             cccccCcCCCccccchhhhhcccccHHHHHHHHHHcc-----CChhhcCCHHHHhcC
Confidence                00000000000     02345678999999999     999999999999975

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=4e-35  Score=256.14  Aligned_cols=226  Identities=20%  Similarity=0.164  Sum_probs=165.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+......+..||+|+++....     ...+.+|+. +++++||||+++++++... . 
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~-   94 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-P-   94 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-S-
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC-C-
Confidence            4689999999999999999998754333345799999875432     126777777 9999999999999999876 3 


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .++|+||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++...
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence            4899999999999999987655799999999999999999999765   8999999999999999999999999999877


Q ss_pred             CCCCC-----Cccccc----------Ccccc--ccccc--------CCCCc---------c----eeccccCCCCCCcch
Q 046594          213 SGGSN-----RRNCEK----------TSEMA--EDIND--------FVGGQ---------E----CLDQRLYIPNEKFKI  254 (304)
Q Consensus       213 ~~~~~-----~~~~~~----------~~~~s--~DV~S--------~~~~~---------~----~~~~~~~~~~~~~~~  254 (304)
                      .....     ....++          ...++  +||||        ...+.         +    +.....   ....+.
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  248 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE---RLPRPE  248 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCC---CCCCCT
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCC---CCCCCc
Confidence            54432     011111          12223  89999        11011         1    111111   223345


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      ..+..+.+++.+||+     .||++|||+.+++++|+++....
T Consensus       249 ~~~~~l~~li~~~l~-----~~p~~Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          249 DCPQDIYNVMVQCWA-----HKPEDRPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             TCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHC---
T ss_pred             CcCHHHHHHHHHHcc-----CCcccCcCHHHHHHHHHHhCccc
Confidence            667889999999999     99999999999999999886543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=5.9e-35  Score=282.37  Aligned_cols=226  Identities=18%  Similarity=0.208  Sum_probs=177.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.+......+..||+|.........   .+.+|+. +++++||||+++++++.+  +.++
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~  466 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NPVW  466 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCE
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec--CceE
Confidence            357889999999999999999887655556889999987644332   6777777 999999999999999854  3359


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence            99999999999999987766799999999999999999999765   899999999999999999999999999987754


Q ss_pred             CCC---Cccccc----------Ccccc--ccccc--------CC----CCc-----ce---eccccCCCCCCcchHHHHH
Q 046594          215 GSN---RRNCEK----------TSEMA--EDIND--------FV----GGQ-----EC---LDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       215 ~~~---~~~~~~----------~~~~s--~DV~S--------~~----~~~-----~~---~~~~~~~~~~~~~~~~~~~  259 (304)
                      ...   ....++          ...++  +||||        ..    +..     +.   +....   ....+..++..
T Consensus       544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~  620 (656)
T 2j0j_A          544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPT  620 (656)
T ss_dssp             ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC---CCCCCTTCCHH
T ss_pred             CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC---CCCCCccccHH
Confidence            432   111111          12233  89999        11    111     11   11111   23455667789


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +.+++.+||.     .||++|||+.++++.|+++.+.+
T Consensus       621 l~~li~~~l~-----~dP~~RPs~~el~~~L~~il~~~  653 (656)
T 2j0j_A          621 LYSLMTKCWA-----YDPSRRPRFTELKAQLSTILEEE  653 (656)
T ss_dssp             HHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcC-----CChhHCcCHHHHHHHHHHHHHHh
Confidence            9999999999     99999999999999999997643

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=8e-35  Score=279.61  Aligned_cols=218  Identities=17%  Similarity=0.137  Sum_probs=170.1

Q ss_pred             ccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeecCC
Q 046594           67 SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR  142 (304)
Q Consensus        67 ~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~  142 (304)
                      .||+|+||.||++.++.. .++..||||+++.....   ..+.+|+. +++++||||+++++++..+ . +++||||+++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~-~-~~lv~E~~~~  419 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-A-LMLVMEMAGG  419 (613)
T ss_dssp             EEEECSSSEEEEEEEECS-SCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS-S-EEEEEECCTT
T ss_pred             EEecCCCcEEEEEEEecC-CCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC-C-eEEEEEeCCC
Confidence            799999999999987643 24578999999865322   26777888 9999999999999999763 3 5999999999


Q ss_pred             CChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-C---
Q 046594          143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-R---  218 (304)
Q Consensus       143 gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~---  218 (304)
                      |+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... .   
T Consensus       420 g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~  496 (613)
T 2ozo_A          420 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR  496 (613)
T ss_dssp             CBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred             CcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence            999999987766899999999999999999999765   899999999999999999999999999987654322 0   


Q ss_pred             -cccc---c-------Ccccc--ccccc--------C-------CCCc--ce---eccccCCCCCCcchHHHHHHHHHHH
Q 046594          219 -RNCE---K-------TSEMA--EDIND--------F-------VGGQ--EC---LDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       219 -~~~~---~-------~~~~s--~DV~S--------~-------~~~~--~~---~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                       ...+   +       ...++  +||||        .       ....  ++   +....   +...+..++..+.+|+.
T Consensus       497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~---~~~~p~~~~~~l~~li~  573 (613)
T 2ozo_A          497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPECPPELYALMS  573 (613)
T ss_dssp             -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC---CCCCCTTCCHHHHHHHH
T ss_pred             cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC---CCCCCCcCCHHHHHHHH
Confidence             1111   1       22333  99999        1       1111  11   11222   33556677899999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      +||+     .||++|||+.++++.|+.+....+
T Consensus       574 ~cl~-----~dP~~RPs~~~l~~~L~~~~~~~~  601 (613)
T 2ozo_A          574 DCWI-----YKWEDRPDFLTVEQRMRACYYSLA  601 (613)
T ss_dssp             HTTC-----SSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred             HHcC-----CChhHCcCHHHHHHHHHHHHHHhc
Confidence            9999     999999999999999998865443

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=4.6e-35  Score=256.71  Aligned_cols=218  Identities=16%  Similarity=0.169  Sum_probs=169.3

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCC------
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDG------  129 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~------  129 (304)
                      +..+|++.+.||+|+||.||++.+.   .+++.||||.+....... .+.+|+. +++++||||+++++++.+.      
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNA---LDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP   80 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred             ccccchhhheeccCCcEEEEEEEEc---CCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence            4678999999999999999999875   357999999997543332 6777777 9999999999999987643      


Q ss_pred             ------CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          130 ------LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       130 ------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                            ...+++||||+++|+|.+++......+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||
T Consensus        81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl  157 (303)
T 1zy4_A           81 MTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKI  157 (303)
T ss_dssp             -----CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred             hcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEE
Confidence                  2456999999999999999987665788999999999999999999765   8999999999999999999999


Q ss_pred             cccccccccCCCCC----------------Cccccc-----------Ccccc--ccccc---------CCC--Cc-----
Q 046594          204 AGFGAANYCSGGSN----------------RRNCEK-----------TSEMA--EDIND---------FVG--GQ-----  238 (304)
Q Consensus       204 ~Dfgla~~~~~~~~----------------~~~~~~-----------~~~~s--~DV~S---------~~~--~~-----  238 (304)
                      +|||++........                ....++           .+.++  +||||         .+.  ..     
T Consensus       158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~  237 (303)
T 1zy4_A          158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI  237 (303)
T ss_dssp             CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH
T ss_pred             eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHH
Confidence            99999987643210                111111           12233  99999         211  11     


Q ss_pred             --cee--ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          239 --ECL--DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       239 --~~~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                        .+.  ...+   ...++...+..+.+++.+||+     .||.+|||+.++++|
T Consensus       238 ~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~-----~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          238 LKKLRSVSIEF---PPDFDDNKMKVEKKIIRLLID-----HDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHHSTTCCC---CTTCCTTTSHHHHHHHHHHTC-----SSGGGSCCHHHHHHS
T ss_pred             HHhcccccccc---CccccccchHHHHHHHHHHHh-----cCcccCcCHHHHhCC
Confidence              011  1112   334555667789999999999     999999999999975

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=7.7e-35  Score=253.59  Aligned_cols=217  Identities=17%  Similarity=0.086  Sum_probs=168.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||+|++.......    .+.+|+. +++++||||+++++++...+.. 
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-   80 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH-   80 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE-
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEc---CCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEE-
Confidence            468999999999999999999876   357899999997654222    6667777 9999999999999999887444 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC---eeEccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN---AKLAGFGAAN  210 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~---~kl~Dfgla~  210 (304)
                      ++||||+++++|.+.+.... .+++..+..++.|++.||+|||+.   +++||||||+||+++.++.   +||+|||++.
T Consensus        81 ~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A           81 YLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            99999999999999888766 799999999999999999999765   8999999999999986655   9999999998


Q ss_pred             ccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHH
Q 046594          211 YCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       211 ~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~  257 (304)
                      ....... ....++          ...++  +||||              |....      .+....... ........+
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  235 (284)
T 3kk8_A          157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY-PSPEWDTVT  235 (284)
T ss_dssp             ECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-CTTTTTTSC
T ss_pred             EcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccC-CchhhcccC
Confidence            7655443 222222          22223  99999              11111      111111100 111223456


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+++.+||+     .||++|||+.|+++|
T Consensus       236 ~~~~~li~~~l~-----~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          236 PEAKSLIDSMLT-----VNPKKRITADQALKV  262 (284)
T ss_dssp             HHHHHHHHHHSC-----SSTTTSCCHHHHTTS
T ss_pred             HHHHHHHHHHcc-----cChhhCCCHHHHhcC
Confidence            789999999999     999999999999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.1e-35  Score=264.19  Aligned_cols=216  Identities=19%  Similarity=0.168  Sum_probs=167.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|+..+.||+|+||.||++.+.   .+++.||||++.......     .+.+|+. +++++||||+++++++...+ .
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~  128 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDV---RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-T  128 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-E
T ss_pred             hhheeeeeEEccCCCEEEEEEEEc---cCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-e
Confidence            467999999999999999999865   467999999997543221     5667777 99999999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .++||||++ |+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       129 ~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  204 (348)
T 1u5q_A          129 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM  204 (348)
T ss_dssp             EEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred             EEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence            599999997 589888876656899999999999999999999775   8999999999999999999999999999876


Q ss_pred             CCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHH
Q 046594          213 SGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       213 ~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ..... ..+..+          .+.++  +||||              +....      .+.....   ....+...+..
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  281 (348)
T 1u5q_A          205 APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES---PALQSGHWSEY  281 (348)
T ss_dssp             SSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCCCTTSCHH
T ss_pred             CCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC---CCCCCCCCCHH
Confidence            54332 111111          12333  89999              11111      1111111   11223445678


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      +.+++.+||+     .||++|||+.+++++.
T Consensus       282 l~~li~~~l~-----~dP~~Rps~~~ll~h~  307 (348)
T 1u5q_A          282 FRNFVDSCLQ-----KIPQDRPTSEVLLKHR  307 (348)
T ss_dssp             HHHHHHHHTC-----SSGGGSCCHHHHTTCH
T ss_pred             HHHHHHHHcc-----cChhhCcCHHHHhhCh
Confidence            8999999999     9999999999998763

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.2e-35  Score=263.60  Aligned_cols=217  Identities=18%  Similarity=0.137  Sum_probs=169.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .++|++.+.||+|+||.||++.+.   .+++.+|+|++.....     ...+.+|+. ++.++||||+++++++.+. +.
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~  115 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDA---DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-DF  115 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-SE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-Ce
Confidence            468999999999999999999876   3578999999875431     126677777 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus       116 ~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          116 VFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             EEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence            599999999999999988765 799999999999999999999765   8999999999999999999999999999876


Q ss_pred             CCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ....++          ...++  +||||              |....  +...... .....++......+.+
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  270 (335)
T 2owb_A          192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-KNEYSIPKHINPVAAS  270 (335)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-HTCCCCCTTSCHHHHH
T ss_pred             ccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh-cCCCCCCccCCHHHHH
Confidence            53322  122222          12223  89999              21111  1000000 0012344556678899


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||+     .||++|||+.|++++
T Consensus       271 li~~~l~-----~dp~~Rps~~ell~~  292 (335)
T 2owb_A          271 LIQKMLQ-----TDPTARPTINELLND  292 (335)
T ss_dssp             HHHHHTC-----SSGGGSCCGGGGGGS
T ss_pred             HHHHHcc-----CChhHCcCHHHHhcC
Confidence            9999999     999999999999985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=4.7e-35  Score=259.55  Aligned_cols=218  Identities=19%  Similarity=0.198  Sum_probs=151.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||+|.+......   ..+.+|+. +++++||||+++++++... +.++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~   79 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNK---TTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE-NKLT   79 (317)
T ss_dssp             ---------------CEEEEEECS---SSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT-TEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEEC---CCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC-CeEE
Confidence            468999999999999999999876   35799999999765433   26667777 9999999999999999887 4559


Q ss_pred             EEEeecCCCChhhHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          135 LVFEFMQRGSLRWNLREKG-----GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      +||||++ |+|.+++....     ..+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||++
T Consensus        80 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  155 (317)
T 2pmi_A           80 LVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA  155 (317)
T ss_dssp             EEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred             EEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccc
Confidence            9999998 59999887542     2689999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc-----------Ccccc--ccccc--------------CCCCc------ceec------------
Q 046594          210 NYCSGGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ------ECLD------------  242 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~~~------------  242 (304)
                      +.......  ....++           ...++  +||||              |....      .+.+            
T Consensus       156 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  235 (317)
T 2pmi_A          156 RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPS  235 (317)
T ss_dssp             EETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGG
T ss_pred             eecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhh
Confidence            87643322  111222           12233  89999              22111      0000            


Q ss_pred             --------cccCC-C--------CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 --------QRLYI-P--------NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 --------~~~~~-~--------~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                              +.+.. .        ....+...+..+.+++.+||+     .||++|||+.|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~-----~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQ-----LNPDMRLSAKQALHH  294 (317)
T ss_dssp             GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSC-----SSGGGSCCHHHHTTS
T ss_pred             hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCC-----CCcccCCCHHHHhCC
Confidence                    00000 0        000111345689999999999     999999999999875

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.2e-34  Score=259.81  Aligned_cols=216  Identities=19%  Similarity=0.160  Sum_probs=165.1

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEE
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.||+|++......  ..+|+. +.++ +||||+++++++.+. ..+|+
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~--~~~E~~~l~~~~~hp~iv~~~~~~~~~-~~~~l   93 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHK---ATNMEFAVKIIDKSKRD--PTEEIEILLRYGQHPNIITLKDVYDDG-KYVYV   93 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEETTTCC--CHHHHHHHHHHTTSTTBCCEEEEEECS-SEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEcccCC--hHHHHHHHHHhcCCCCcCeEEEEEEcC-CEEEE
Confidence            4678999999999999999999886   35789999999764332  233444 5555 899999999999887 45599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC----CCeeEcccccccc
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL----CNAKLAGFGAANY  211 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~----~~~kl~Dfgla~~  211 (304)
                      ||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   ||+||||||+|||+..+    +.+||+|||+++.
T Consensus        94 v~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           94 VTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             EECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            999999999999998766 799999999999999999999765   89999999999998543    3599999999987


Q ss_pred             cCCCCC--CcccccCcccc------------ccccc--------------CCCCc-----ceec----cccCCCCCCcch
Q 046594          212 CSGGSN--RRNCEKTSEMA------------EDIND--------------FVGGQ-----ECLD----QRLYIPNEKFKI  254 (304)
Q Consensus       212 ~~~~~~--~~~~~~~~~~s------------~DV~S--------------~~~~~-----~~~~----~~~~~~~~~~~~  254 (304)
                      ......  ...+++..+++            +||||              |....     ++..    .... .......
T Consensus       170 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~~~~  248 (342)
T 2qr7_A          170 LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS-LSGGYWN  248 (342)
T ss_dssp             CBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC-CCSTTTT
T ss_pred             CcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc-cCccccc
Confidence            654432  33334433222            89999              22111     1111    1110 0122334


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+..+.+++.+||.     .||++|||+.++++|
T Consensus       249 ~~s~~~~~li~~~L~-----~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          249 SVSDTAKDLVSKMLH-----VDPHQRLTAALVLRH  278 (342)
T ss_dssp             TSCHHHHHHHHHHTC-----SSTTTSCCHHHHTTS
T ss_pred             cCCHHHHHHHHHHCC-----CChhHCcCHHHHhcC
Confidence            567889999999999     999999999999975

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.1e-35  Score=262.81  Aligned_cols=218  Identities=17%  Similarity=0.176  Sum_probs=160.8

Q ss_pred             HHHhhccc---cccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCC-CCcccceeeeeeCCCCc
Q 046594           58 ILKRRRML---KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS-HLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        58 ~~~~~~~~---~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~  132 (304)
                      +..+|++.   +.||+|+||.||++.++   .+++.||||++.... ...+.+|+. ++.+. ||||+++++++.+.. .
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-~   80 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHK---KSNQAFAVKIISKRM-EANTQKEITALKLCEGHPNIVKLHEVFHDQL-H   80 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEET---TTCCEEEEEEEEGGG-HHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-E
T ss_pred             chhccccccCCCccccCCCeEEEEEEEC---CCCCEEEEEEEChhh-hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC-E
Confidence            35678775   78999999999999886   457999999997543 235556666 88886 999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC---CeeEcccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC---NAKLAGFGAA  209 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~---~~kl~Dfgla  209 (304)
                      .++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++   .+||+|||++
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a  156 (325)
T 3kn6_A           81 TFLVMELLNGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFA  156 (325)
T ss_dssp             EEEEECCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTC
T ss_pred             EEEEEEccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccc
Confidence            599999999999999998875 799999999999999999999765   899999999999998765   8999999999


Q ss_pred             cccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc---------ceeccccC---CCC
Q 046594          210 NYCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ---------ECLDQRLY---IPN  249 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~---------~~~~~~~~---~~~  249 (304)
                      +.......  ....++          ...++  +||||              |....         ++......   ...
T Consensus       157 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~  236 (325)
T 3kn6_A          157 RLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE  236 (325)
T ss_dssp             EECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC
T ss_pred             eecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC
Confidence            86654332  222222          12223  89999              21111         11111110   001


Q ss_pred             CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          250 EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       250 ~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .......+..+.+++.+||.     .||.+|||+.++++|
T Consensus       237 ~~~~~~~s~~~~~li~~~L~-----~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          237 GEAWKNVSQEAKDLIQGLLT-----VDPNKRLKMSGLRYN  271 (325)
T ss_dssp             SHHHHTSCHHHHHHHHHHHC-----CCTTTCCCTTTSTTC
T ss_pred             cccccCCCHHHHHHHHHHCC-----CChhHCCCHHHHhcC
Confidence            11113456889999999999     999999999999865

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3e-35  Score=266.49  Aligned_cols=213  Identities=19%  Similarity=0.164  Sum_probs=161.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHH-H-hhCCCCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEI-L-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~-~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.+|+|++.......     .+..|. . ++.++||||+++++++.+. .
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~-~  112 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHK---AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA-D  112 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEET---TTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS-S
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEc---CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC-C
Confidence            358999999999999999999886   357899999997643211     333333 3 6778999999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||+++|+|.+++...+ .+++..++.++.|++.||+|||+.   +|+||||||+|||++.+|.+||+|||+++.
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            5599999999999999998766 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC--CcccccCcc----------cc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          212 CSGGSN--RRNCEKTSE----------MA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       212 ~~~~~~--~~~~~~~~~----------~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ......  ...+++..+          ++  +||||              |....  ++.+..+ .....++...+..+.
T Consensus       189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~  267 (373)
T 2r5t_A          189 NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-NKPLQLKPNITNSAR  267 (373)
T ss_dssp             GBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHH-HSCCCCCSSSCHHHH
T ss_pred             cccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-hcccCCCCCCCHHHH
Confidence            433222  333344222          22  89999              22111  1111111 001234556678899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVD  285 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~  285 (304)
                      +++.+||+     .||.+||++.+
T Consensus       268 ~li~~lL~-----~dp~~R~~~~~  286 (373)
T 2r5t_A          268 HLLEGLLQ-----KDRTKRLGAKD  286 (373)
T ss_dssp             HHHHHHTC-----SSGGGSTTTTT
T ss_pred             HHHHHHcc-----cCHHhCCCCCC
Confidence            99999999     99999999853

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=4.6e-35  Score=263.41  Aligned_cols=217  Identities=17%  Similarity=0.142  Sum_probs=167.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++.   +++.||+|+++....     ...+..|.. +..+ +||||+++++++.+. .
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~-~   94 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-D   94 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETT---EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS-S
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC-C
Confidence            4689999999999999999999864   368999999975432     124555566 7776 899999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||+++|+|.+++...+ .+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++.
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence            5599999999999999998766 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC--CcccccCcc----------cc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          212 CSGGSN--RRNCEKTSE----------MA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       212 ~~~~~~--~~~~~~~~~----------~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ......  ...+++..+          ++  +||||              |....  ++....+ .....+|...+..+.
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~  249 (353)
T 2i0e_A          171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM-EHNVAYPKSMSKEAV  249 (353)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHH
T ss_pred             cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH-hCCCCCCCCCCHHHH
Confidence            433222  333344222          22  89999              22111  1111111 012245566778899


Q ss_pred             HHHHHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      +++.+||.     .||.+||+     +.++++|
T Consensus       250 ~li~~lL~-----~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          250 AICKGLMT-----KHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             HHHHHHTC-----SCTTSCTTCSTTHHHHHHTS
T ss_pred             HHHHHHhh-----cCHHHcCCCCCCCHHHHhcC
Confidence            99999999     99999995     5777765

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=8.3e-35  Score=272.55  Aligned_cols=217  Identities=18%  Similarity=0.176  Sum_probs=168.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEecccc----chhHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA----SQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||||++....    ....+.+|+. +++++||||+++++++.+. ..+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~   96 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDR---ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-SSF   96 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEET---TTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-SEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEEC---CCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC-CEE
Confidence            579999999999999999999876   357999999986432    2236777777 9999999999999999887 455


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC---CCCCeeEccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD---ELCNAKLAGFGAAN  210 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~---~~~~~kl~Dfgla~  210 (304)
                      ++||||+++|+|.+.+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++   .++.+||+|||+++
T Consensus        97 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A           97 YIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            99999999999999988766 799999999999999999999765   899999999999995   45689999999998


Q ss_pred             ccCCCCC-CcccccC---------cccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHH
Q 046594          211 YCSGGSN-RRNCEKT---------SEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       211 ~~~~~~~-~~~~~~~---------~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~  258 (304)
                      ....... ....++.         +.++  +||||              |....      .+...... .........+.
T Consensus       173 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s~  251 (486)
T 3mwu_A          173 CFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA-FDLPQWRTISD  251 (486)
T ss_dssp             TBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-SCSGGGGGSCH
T ss_pred             ECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCCcccCCCCH
Confidence            7655433 2223332         2233  89999              21111      11111110 01122245578


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+.+++.+||.     .||.+|||+.++++|
T Consensus       252 ~~~~li~~~L~-----~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          252 DAKDLIRKMLT-----FHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHHHHHHHTC-----SSTTTSCCHHHHHHC
T ss_pred             HHHHHHHHHcC-----CChhhCcCHHHHhcC
Confidence            89999999999     999999999999986

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=5.5e-35  Score=255.50  Aligned_cols=220  Identities=19%  Similarity=0.202  Sum_probs=166.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC---CC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG---LQ  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~---~~  131 (304)
                      ++|++.+.||+|+||.||++.+.   .++..||+|.+.......    .+.+|+. +++++||||+++++++...   ..
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDT---ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             eeEEeeeeccCCCCeEEEEeEec---CCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCc
Confidence            35788899999999999999876   357899999987543222    6777887 9999999999999987642   34


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCeeEccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAKLAGFGAAN  210 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfgla~  210 (304)
                      .+++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. ..+++||||||+|||++ .++.+||+|||++.
T Consensus       103 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          103 CIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eEEEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence            5699999999999999998765 799999999999999999999764 12399999999999998 78999999999997


Q ss_pred             ccCCCCCCccccc---------Ccccc--ccccc--------------CCCCc---ceeccccC-CCCCCcchHHHHHHH
Q 046594          211 YCSGGSNRRNCEK---------TSEMA--EDIND--------------FVGGQ---ECLDQRLY-IPNEKFKITSLAKLG  261 (304)
Q Consensus       211 ~~~~~~~~~~~~~---------~~~~s--~DV~S--------------~~~~~---~~~~~~~~-~~~~~~~~~~~~~l~  261 (304)
                      ...........++         .+.++  +||||              |....   ........ .....++...++.+.
T Consensus       181 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  260 (290)
T 1t4h_A          181 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK  260 (290)
T ss_dssp             GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHH
T ss_pred             cccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHH
Confidence            6654433222222         11223  89999              21111   11110000 002233444557899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++.+||+     .||.+|||+.++++|
T Consensus       261 ~li~~~l~-----~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          261 EIIEGCIR-----QNKDERYSIKDLLNH  283 (290)
T ss_dssp             HHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHcc-----CChhhCCCHHHHhhC
Confidence            99999999     999999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.7e-34  Score=257.53  Aligned_cols=226  Identities=19%  Similarity=0.245  Sum_probs=168.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeee----CCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQ----DGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~----~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+     +++.||||++....... ..+.++. +..++||||+++++.+.    .+...
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-----DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-----CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            46899999999999999999865     46899999998655444 3334444 66789999999997542    23345


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS------KPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~------~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      +++||||+++|+|.+++....  .++..++.++.|++.||+|||+.+      .++|+||||||+|||++.++.+||+||
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF  164 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF  164 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred             EEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence            689999999999999997764  699999999999999999997642      338999999999999999999999999


Q ss_pred             ccccccCCCCC----------CcccccC-----------------cccc--ccccc---------------CCCCc----
Q 046594          207 GAANYCSGGSN----------RRNCEKT-----------------SEMA--EDIND---------------FVGGQ----  238 (304)
Q Consensus       207 gla~~~~~~~~----------~~~~~~~-----------------~~~s--~DV~S---------------~~~~~----  238 (304)
                      |+++.......          ....++.                 ..++  +||||               ++...    
T Consensus       165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~  244 (336)
T 3g2f_A          165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY  244 (336)
T ss_dssp             TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred             cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence            99987643211          1112221                 1222  79999               11110    


Q ss_pred             -c------------------eeccccCCCCCCc------chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          239 -E------------------CLDQRLYIPNEKF------KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       239 -~------------------~~~~~~~~~~~~~------~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                       .                  ......   +..+      ....+..+.+++.+||+     .||++|||+.|+++.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~-----~dP~~Rps~~e~l~~L~~l  316 (336)
T 3g2f_A          245 QMAFQTEVGNHPTFEDMQVLVSREKQ---RPKFPEAWKENSLAVRSLKETIEDCWD-----QDAEARLTAQXAEERMAEL  316 (336)
T ss_dssp             CCTTHHHHCSSCCHHHHHHHHTTSCC---CCCCCTTCCCCSHHHHHHHHHHHHHSC-----SSGGGSCCHHHHHHHHHHH
T ss_pred             HHhhhcccCCCchHHHHHhhhccccc---CCCCCcccccccchHHHHHHHHHHHhc-----CChhhCcchHHHHHHHHHH
Confidence             0                  000000   1111      23466789999999999     9999999999999999999


Q ss_pred             Hhhhcc
Q 046594          294 KQLFSS  299 (304)
Q Consensus       294 ~~~~~~  299 (304)
                      .+....
T Consensus       317 l~~~~~  322 (336)
T 3g2f_A          317 MMIWER  322 (336)
T ss_dssp             HHCCCC
T ss_pred             HHHHHh
Confidence            876553

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=4.1e-35  Score=264.79  Aligned_cols=230  Identities=12%  Similarity=0.071  Sum_probs=168.4

Q ss_pred             HhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh-------------HHHHHHH-hhCCCCCccccee
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT-------------KLEEEIL-LKSSSHLNIVTLL  123 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~-------------~~~~e~~-l~~l~h~niv~~~  123 (304)
                      .+|++.+.||+|+||.||++.++..  ...++.||||++.......             .+..+.. ++.++||||++++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            4899999999999999999987643  1236899999987654221             2223444 7888999999999


Q ss_pred             eeeeCCC---CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC--CC
Q 046594          124 GYPQDGL---QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD--EL  198 (304)
Q Consensus       124 ~~~~~~~---~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~--~~  198 (304)
                      +++....   ...++||||+ +++|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++  .+
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~  190 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNP  190 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCT
T ss_pred             eeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCC
Confidence            9987642   3469999999 8899999988766899999999999999999999765   899999999999999  88


Q ss_pred             CCeeEcccccccccCCCCC---------Cccccc----------Ccccc--ccccc-----------CCCCcc-eec---
Q 046594          199 CNAKLAGFGAANYCSGGSN---------RRNCEK----------TSEMA--EDIND-----------FVGGQE-CLD---  242 (304)
Q Consensus       199 ~~~kl~Dfgla~~~~~~~~---------~~~~~~----------~~~~s--~DV~S-----------~~~~~~-~~~---  242 (304)
                      +.+||+|||+++.......         ....++          ...++  +||||           ..+... ..+   
T Consensus       191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~  270 (364)
T 3op5_A          191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY  270 (364)
T ss_dssp             TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred             CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH
Confidence            9999999999976643221         111133          22233  89999           111110 000   


Q ss_pred             -----cccCCCCCCc------chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          243 -----QRLYIPNEKF------KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       243 -----~~~~~~~~~~------~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                           .........+      +...+..+.+++.+||.     .||.+||++.++++.|+++.+...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~-----~~p~~RP~~~~l~~~l~~~~~~~~  332 (364)
T 3op5_A          271 VRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKL-----LDYTEKPLYENLRDILLQGLKAIG  332 (364)
T ss_dssp             HHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHT-----CCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHHHHcC
Confidence                 0000000000      02235779999999999     999999999999999999877443

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=3.2e-35  Score=264.86  Aligned_cols=147  Identities=18%  Similarity=0.199  Sum_probs=130.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.+.   .++..||+|++.......   .+.+|+. ++.++||||+++++++...+ .++
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~  107 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHK---PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EIS  107 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT-EEE
T ss_pred             cccceeeeeecCCCCeEEEEEEEC---CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC-EEE
Confidence            457999999999999999999876   457999999998654332   6777888 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.+  +|+||||||+|||++.++.+||+|||++...
T Consensus       108 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             EEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             EEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            9999999999999998876 7999999999999999999998643  7999999999999999999999999998755

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=9.7e-35  Score=251.80  Aligned_cols=216  Identities=18%  Similarity=0.181  Sum_probs=167.9

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.||+|.+......   ..+.+|+. ++.++||||+++++++.+.+ ..
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   80 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-IQ   80 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-EE
T ss_pred             eecceEEEEEeecCCCcEEEEEEEC---CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-EE
Confidence            4689999999999999999999875   35789999998754432   26777887 99999999999999998874 44


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  156 (276)
T 2yex_A           81 YLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (276)
T ss_dssp             EEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             EEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence            99999999999999997655 799999999999999999999764   89999999999999999999999999997653


Q ss_pred             CCCC----Cccccc----------C-cccc--ccccc--------------CCCCcc-------eeccccCCCCCCcchH
Q 046594          214 GGSN----RRNCEK----------T-SEMA--EDIND--------------FVGGQE-------CLDQRLYIPNEKFKIT  255 (304)
Q Consensus       214 ~~~~----~~~~~~----------~-~~~s--~DV~S--------------~~~~~~-------~~~~~~~~~~~~~~~~  255 (304)
                      ....    ....++          . ...+  +||||              |.....       ......   .......
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~  233 (276)
T 2yex_A          157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT---YLNPWKK  233 (276)
T ss_dssp             ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT---TSTTGGG
T ss_pred             CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc---ccCchhh
Confidence            2211    111111          1 2223  99999              211110       011111   1112234


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          256 SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       256 ~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+..+.+++.+||+     .||.+|||+.|+++|
T Consensus       234 ~~~~~~~li~~~l~-----~~p~~Rps~~~il~~  262 (276)
T 2yex_A          234 IDSAPLALLHKILV-----ENPSARITIPDIKKD  262 (276)
T ss_dssp             SCHHHHHHHHHHSC-----SSTTTSCCHHHHTTC
T ss_pred             cCHHHHHHHHHHCC-----CCchhCCCHHHHhcC
Confidence            56789999999999     999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=6.9e-35  Score=257.93  Aligned_cols=226  Identities=16%  Similarity=0.135  Sum_probs=170.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeC---CCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQD---GLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~---~~~~  132 (304)
                      .++|++.+.||+|+||.||++.+.   .+++.||||++.......  .+.+|+. ++.++||||+++++++..   ....
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGL---HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE  104 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEET---TTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEec---CCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence            358999999999999999999875   457999999986544333  6777777 999999999999999863   2245


Q ss_pred             eEEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      .++||||+++|+|.+++...   +..+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~  181 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence            69999999999999998763   34799999999999999999999765   8999999999999999999999999988


Q ss_pred             cccCCCCC---------------------Cccccc---Ccccc--ccccc-----------CCCCc----------ceec
Q 046594          210 NYCSGGSN---------------------RRNCEK---TSEMA--EDIND-----------FVGGQ----------ECLD  242 (304)
Q Consensus       210 ~~~~~~~~---------------------~~~~~~---~~~~s--~DV~S-----------~~~~~----------~~~~  242 (304)
                      ........                     .+....   ...++  +||||           ..+..          ....
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  261 (317)
T 2buj_A          182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ  261 (317)
T ss_dssp             EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH
T ss_pred             hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh
Confidence            75432110                     000000   11123  89999           11111          0111


Q ss_pred             cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          243 QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       243 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ...   ....+...+..+.+++.+||+     .||.+|||+.+++++|+.+.....
T Consensus       262 ~~~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~ll~~L~~~~~~~~  309 (317)
T 2buj_A          262 NQL---SIPQSPRHSSALWQLLNSMMT-----VDPHQRPHIPLLLSQLEALQPPAP  309 (317)
T ss_dssp             CC-----CCCCTTSCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred             ccC---CCCccccCCHHHHHHHHHHhh-----cChhhCCCHHHHHHHhhhcCCCCC
Confidence            111   122234556889999999999     999999999999999998865443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.2e-34  Score=269.86  Aligned_cols=216  Identities=21%  Similarity=0.224  Sum_probs=157.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~---  130 (304)
                      .++|++.+.||+|+||.||++.+.   .+++.||||++......    ..+.+|+. ++.++||||+++++++....   
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~  137 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDA---VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE  137 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEET---TTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred             cCCeEEEEEeecCCCeEEEEEEEC---CCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence            468999999999999999999876   35789999999754222    15666777 99999999999999986543   


Q ss_pred             --CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          131 --QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       131 --~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                        ..+|+||||+++ +|.+.+..   .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+
T Consensus       138 ~~~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~  210 (464)
T 3ttj_A          138 EFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  210 (464)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred             cCCeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence              346999999976 57776654   589999999999999999999765   899999999999999999999999999


Q ss_pred             ccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------cee--------------
Q 046594          209 ANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECL--------------  241 (304)
Q Consensus       209 a~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~--------------  241 (304)
                      ++....... ....++          ...++  +||||              |++..      .++              
T Consensus       211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~  290 (464)
T 3ttj_A          211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  290 (464)
T ss_dssp             C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred             eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence            987765433 222333          22223  89999              32221      000              


Q ss_pred             --------ccccCCCC---------------CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 --------DQRLYIPN---------------EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 --------~~~~~~~~---------------~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                              ........               .......+..+.+|+.+||.     .||++|||+.|+++|
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~-----~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV-----IDPAKRISVDDALQH  356 (464)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC-----SSTTTSCCHHHHHTS
T ss_pred             chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcC-----CChhhCCCHHHHhcC
Confidence                    00000000               00111226779999999999     999999999999986

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.4e-35  Score=271.14  Aligned_cols=218  Identities=19%  Similarity=0.110  Sum_probs=168.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.++   .+++.||+|++.......     .+.+|.. +..++||||+++++++.+. ..+
T Consensus        74 ~~y~~~~~LG~G~fG~V~~~~~~---~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~-~~~  149 (437)
T 4aw2_A           74 EDFEILKVIGRGAFGEVAVVKLK---NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD-NNL  149 (437)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS-SEE
T ss_pred             hheEEEEEEEeCCCEEEEEEEEc---CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-CEE
Confidence            46888999999999999999886   357899999997532221     4777777 9999999999999999887 455


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+++|+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~  226 (437)
T 4aw2_A          150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLM  226 (437)
T ss_dssp             EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence            999999999999999988655899999999999999999999765   89999999999999999999999999998765


Q ss_pred             CCCC---CcccccC---------------cccc--ccccc--------------CCCCc------ceeccccCCCCCCcc
Q 046594          214 GGSN---RRNCEKT---------------SEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       214 ~~~~---~~~~~~~---------------~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~  253 (304)
                      ....   ...+|+.               +.++  +||||              |....      .++............
T Consensus       227 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~  306 (437)
T 4aw2_A          227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQV  306 (437)
T ss_dssp             TTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSC
T ss_pred             cCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCccc
Confidence            4433   2223331               1233  89999              22211      122211100011122


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCC--CCCHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNEN--HPKIVDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~--Rps~~~vl~~  289 (304)
                      ...+..+.+|+.+||.     .+|++  ||++.|+++|
T Consensus       307 ~~~s~~~~dLi~~lL~-----~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          307 TDVSENAKDLIRRLIC-----SREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             CCSCHHHHHHHHTTSS-----CGGGCTTTTTTHHHHTS
T ss_pred             ccCCHHHHHHHHHHhc-----ccccccCCCCHHHHhCC
Confidence            3467889999999998     88887  9999999876

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3.4e-35  Score=256.08  Aligned_cols=217  Identities=19%  Similarity=0.217  Sum_probs=170.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.+.   .++..||+|++.....     ...+.+|+. ++.++||||+++++++.+. ..
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~   88 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREK---QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR-KR   88 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-SE
T ss_pred             hhhceeeheecCCCCeEEEEEEEc---CCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC-CE
Confidence            468999999999999999999875   3578999999865322     226777887 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++|+|.+++...+ .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++...
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           89 IYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            599999999999999998776 799999999999999999999654   8999999999999999999999999998766


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .........++          ...++  +||||              |....  +...... .....++...+..+.+++
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li  243 (284)
T 2vgo_A          165 PSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-NVDLKFPPFLSDGSKDLI  243 (284)
T ss_dssp             SSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-TTCCCCCTTSCHHHHHHH
T ss_pred             cccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh-ccccCCCCcCCHHHHHHH
Confidence            54332222222          22223  99999              21111  1110000 012234555678899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||+     .||.+|||+.++++|
T Consensus       244 ~~~l~-----~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          244 SKLLR-----YHPPQRLPLKGVMEH  263 (284)
T ss_dssp             HHHSC-----SSGGGSCCHHHHHTC
T ss_pred             HHHhh-----cCHhhCCCHHHHhhC
Confidence            99999     999999999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=2.1e-35  Score=279.63  Aligned_cols=219  Identities=21%  Similarity=0.201  Sum_probs=172.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+|++.+.||+|+||.||++.+.    ++..||||+++..... +.+.+|+. +++++||||+++++++.+  ..+++||
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~  340 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVT  340 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET----TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEE
T ss_pred             hhhhhheecccCCCeEEEEEEEC----CCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEee
Confidence            46788899999999999999875    3467999999865433 37777888 999999999999999876  3359999


Q ss_pred             eecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|.+++.... ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  417 (535)
T 2h8h_A          341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  417 (535)
T ss_dssp             CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred             ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence            9999999999997642 3699999999999999999999765   89999999999999999999999999998765322


Q ss_pred             C---Cccccc----------Ccccc--ccccc--------CCCCc---------cee---ccccCCCCCCcchHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND--------FVGGQ---------ECL---DQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S--------~~~~~---------~~~---~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .   ....++          .+.++  +||||        ...+.         ++.   ....   +...+..++..+.
T Consensus       418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~  494 (535)
T 2h8h_A          418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---RMPCPPECPESLH  494 (535)
T ss_dssp             HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTCCHHHH
T ss_pred             eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHHH
Confidence            1   111111          22333  99999        11111         111   1122   2344566778899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +|+.+||+     .||++|||+.++++.|+.+..
T Consensus       495 ~li~~cl~-----~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          495 DLMCQCWR-----KEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHHHTC-----SSGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHcC-----CChhHCcCHHHHHHHHHHHhh
Confidence            99999999     999999999999999998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=6.5e-35  Score=273.08  Aligned_cols=217  Identities=18%  Similarity=0.139  Sum_probs=170.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||||++.....     ...+.+|+. +++++||||+++++++... ..
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~  100 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDK---ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-GY  100 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-SE
T ss_pred             cCceEEeeEEecCCCEEEEEEEEC---CCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-CE
Confidence            579999999999999999999876   4579999999865422     226777777 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee---CCCCCeeEcccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL---DELCNAKLAGFGAA  209 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfgla  209 (304)
                      +++||||+++|+|.+.+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||+   +.++.+||+|||++
T Consensus       101 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A          101 FYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             EEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            599999999999999998766 799999999999999999999775   89999999999999   46789999999999


Q ss_pred             cccCCCCC-CcccccCc---------ccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHH
Q 046594          210 NYCSGGSN-RRNCEKTS---------EMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       210 ~~~~~~~~-~~~~~~~~---------~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~  257 (304)
                      +....... ....++..         .++  +||||              |....      .+...... .........+
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s  255 (484)
T 3nyv_A          177 THFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT-FELPQWKKVS  255 (484)
T ss_dssp             HHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCSGGGGGSC
T ss_pred             EEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC-CCCcccccCC
Confidence            87765544 22223311         223  89999              22211      11111110 0112224567


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+.+++.+||.     .||.+|||+.++++|
T Consensus       256 ~~~~~li~~~L~-----~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          256 ESAKDLIRKMLT-----YVPSMRISARDALDH  282 (484)
T ss_dssp             HHHHHHHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHHCC-----CChhHCcCHHHHhhC
Confidence            889999999999     999999999999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.1e-34  Score=261.95  Aligned_cols=226  Identities=17%  Similarity=0.133  Sum_probs=175.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCC-ce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-RR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~-~~  133 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||||++......   ..+.+|+. +++++||||+++++++...+. ..
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~   84 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHK---KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK   84 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEEC---CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence            358999999999999999999886   35789999999764332   25666777 999999999999999876643 56


Q ss_pred             EEEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee----CCCCCeeEcccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL----DELCNAKLAGFG  207 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill----~~~~~~kl~Dfg  207 (304)
                      ++||||+++|+|.+++.....  .+++..++.++.|++.||+|||+.   +|+||||||+|||+    +.++.+||+|||
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence            999999999999999987543  499999999999999999999765   89999999999999    777889999999


Q ss_pred             cccccCCCCC-CcccccC------------------cccc--ccccc--------------CCCC---c---ceec----
Q 046594          208 AANYCSGGSN-RRNCEKT------------------SEMA--EDIND--------------FVGG---Q---ECLD----  242 (304)
Q Consensus       208 la~~~~~~~~-~~~~~~~------------------~~~s--~DV~S--------------~~~~---~---~~~~----  242 (304)
                      +++....... ....++.                  ..++  +||||              |...   .   +.+.    
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~  241 (396)
T 4eut_A          162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (396)
T ss_dssp             GCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred             CceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence            9987655433 2222221                  2223  89999              1110   0   0000    


Q ss_pred             ---------------------cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          243 ---------------------QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       243 ---------------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                                           ..+ .....++......+.+++.+||+     .||++|||+.+++++++.+.+.
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~ll~~~L~-----~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          242 GKPSGAISGVQKAENGPIDWSGDM-PVSCSLSRGLQVLLTPVLANILE-----ADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             SCCTTCCEEEECSTTCCEEEESSC-CTTCSSCHHHHHHHHHHHHHHSC-----CCTTTSCCHHHHHHHHHHHHTC
T ss_pred             CCCcccchhheeccCCCcccCccC-CcccccchHHHhhchHHHHHhhc-----cChhhhccHHHHHHHHHHHhhc
Confidence                                 011 00123446778889999999999     9999999999999999988763

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1e-34  Score=255.56  Aligned_cols=218  Identities=19%  Similarity=0.183  Sum_probs=169.0

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +..+|++.+.||+|+||.||++.++   .+|+.||+|.+.......  .+.+|+. +++++||||+++++++...+ .++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~   82 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQR---LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT-HYY   82 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS-EEE
T ss_pred             hhccceeeeeccCCCCceEEEEEEC---CCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC-EEE
Confidence            4679999999999999999999875   357999999998654322  6777888 99999999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee---CCCCCeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL---DELCNAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfgla~~  211 (304)
                      +||||+++++|.+++...+ .+++..+..++.|++.||+|||+.   +++||||||+||++   +.++.++|+|||++..
T Consensus        83 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~  158 (304)
T 2jam_A           83 LVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM  158 (304)
T ss_dssp             EEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred             EEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence            9999999999999998766 799999999999999999999765   89999999999999   7788999999999976


Q ss_pred             cCCCCCCccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHH
Q 046594          212 CSGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       212 ~~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ..........++          ...++  +||||              |....      .+..... ..........+..
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~  237 (304)
T 2jam_A          159 EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY-EFESPFWDDISES  237 (304)
T ss_dssp             CCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC-CCCTTTTTTSCHH
T ss_pred             cCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-CCCccccccCCHH
Confidence            544322111111          22233  99999              21111      1111111 0012333456788


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+++.+||.     .||++|||+.++++|
T Consensus       238 ~~~li~~~l~-----~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          238 AKDFICHLLE-----KDPNERYTCEKALSH  262 (304)
T ss_dssp             HHHHHHHHHC-----SSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHcC-----CChhHCcCHHHHhcC
Confidence            9999999999     999999999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=8.7e-35  Score=264.85  Aligned_cols=147  Identities=16%  Similarity=0.042  Sum_probs=129.3

Q ss_pred             HHhhccccccCCc--cccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDS--VEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g--~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|  +||.||++.++   .+++.||||++.......    .+.+|+. ++.++||||+++++++.+.+ 
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-   99 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYK---PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-   99 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEc---CCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC-
Confidence            3589999999999  99999999986   357999999997654222    6677888 99999999999999999874 


Q ss_pred             ceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      .+++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~  176 (389)
T 3gni_B          100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL  176 (389)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccce
Confidence            5599999999999999998763 3799999999999999999999765   89999999999999999999999999886


Q ss_pred             cc
Q 046594          211 YC  212 (304)
Q Consensus       211 ~~  212 (304)
                      ..
T Consensus       177 ~~  178 (389)
T 3gni_B          177 SM  178 (389)
T ss_dssp             EC
T ss_pred             ee
Confidence            44

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.4e-34  Score=254.08  Aligned_cols=218  Identities=17%  Similarity=0.180  Sum_probs=166.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|++.+.||+|+||.||++.+.   .+|+.||+|.+........+.+|+. ++.++||||+++++++...+ .+++||
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~  103 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHK---ETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNT-DLWIVM  103 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEET---TTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-EEEEEE
T ss_pred             hhhhhhheeeccCCCeEEEEEEEC---CCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-EEEEEe
Confidence            568999999999999999999875   3579999999987665557777777 99999999999999998874 459999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++++|.+++......+++..++.++.|++.||+|||..   +++||||||+||+++.++.+||+|||++........
T Consensus       104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  180 (314)
T 3com_A          104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA  180 (314)
T ss_dssp             ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence            99999999999986555899999999999999999999765   899999999999999999999999999987654322


Q ss_pred             --Cccccc----------Ccccc--ccccc--------------CCCCcc-----eeccccCCCCCCcchHHHHHHHHHH
Q 046594          218 --RRNCEK----------TSEMA--EDIND--------------FVGGQE-----CLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       218 --~~~~~~----------~~~~s--~DV~S--------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                        ....++          ...++  +||||              |.....     ...... .+....+...+..+.+++
T Consensus       181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li  259 (314)
T 3com_A          181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP-PPTFRKPELWSDNFTDFV  259 (314)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCCSSGGGSCHHHHHHH
T ss_pred             ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-CcccCCcccCCHHHHHHH
Confidence              112222          12223  89999              111110     000000 001223445568899999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||.     .||.+|||+.++++|
T Consensus       260 ~~~l~-----~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          260 KQCLV-----KSPEQRATATQLLQH  279 (314)
T ss_dssp             HHHTC-----SCTTTSCCHHHHTTS
T ss_pred             HHHcc-----CChhhCcCHHHHHhC
Confidence            99999     999999999999874

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2.8e-34  Score=267.04  Aligned_cols=147  Identities=19%  Similarity=0.199  Sum_probs=118.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~---  130 (304)
                      ..+|++.+.||+|+||.||++.++.   +++.||||++......    ..+.+|+. |+.++||||+++++++....   
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  128 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKL---EKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK  128 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC-----CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECC---CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence            3689999999999999999998863   5789999998654322    15667777 99999999999999985432   


Q ss_pred             -CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       131 -~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                       ..+|+||||++ |+|.+++.... .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       129 ~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla  203 (458)
T 3rp9_A          129 FDELYVVLEIAD-SDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA  203 (458)
T ss_dssp             CCCEEEEECCCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CceEEEEEeccc-cchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence             45699999985 59999998765 799999999999999999999765   8999999999999999999999999999


Q ss_pred             cccC
Q 046594          210 NYCS  213 (304)
Q Consensus       210 ~~~~  213 (304)
                      +...
T Consensus       204 ~~~~  207 (458)
T 3rp9_A          204 RTVD  207 (458)
T ss_dssp             BCTT
T ss_pred             hhcc
Confidence            8764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=7.8e-34  Score=253.66  Aligned_cols=226  Identities=20%  Similarity=0.185  Sum_probs=171.3

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHHhh--CCCCCcccceeeeeeCCCC---
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEILLK--SSSHLNIVTLLGYPQDGLQ---  131 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~l~--~l~h~niv~~~~~~~~~~~---  131 (304)
                      .+.++|++.+.||+|+||.||++.+     +++.||||++.........+|...+.  .++||||+++++++.....   
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE-----cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            4468999999999999999999876     36899999997654433333332344  3799999999999987752   


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY-----SKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~-----~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      .+++||||+++|+|.+++...  .+++..++.++.|++.||+|||..     ++.+++||||||+|||++.++.+||+||
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df  191 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  191 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred             eeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence            569999999999999999765  599999999999999999999831     1558999999999999999999999999


Q ss_pred             ccccccCCCCC------Cccccc---------Cc-------cc--cccccc---------CC------------CCcc--
Q 046594          207 GAANYCSGGSN------RRNCEK---------TS-------EM--AEDIND---------FV------------GGQE--  239 (304)
Q Consensus       207 gla~~~~~~~~------~~~~~~---------~~-------~~--s~DV~S---------~~------------~~~~--  239 (304)
                      |++........      ....++         .+       ..  .+||||         ..            +...  
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~  271 (342)
T 1b6c_B          192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  271 (342)
T ss_dssp             TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence            99977654331      111122         11       11  289999         11            0000  


Q ss_pred             ------------eeccccCCCCCCcc-----hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          240 ------------CLDQRLYIPNEKFK-----ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       240 ------------~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                                  +....+   +..++     .++...+.+++.+||+     .||++|||+.+++++|+++.+..
T Consensus       272 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~-----~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          272 PSDPSVEEMRKVVCEQKL---RPNIPNRWQSCEALRVMAKIMRECWY-----ANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             CSSCCHHHHHHHHTTSCC---CCCCCGGGGTSHHHHHHHHHHHHHCC-----SSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             cCcccHHHHHHHHHHHHh---CCCCcccccchhHHHHHHHHHHHHhc-----cChhhCCCHHHHHHHHHHHHHHh
Confidence                        111111   12222     3567789999999999     99999999999999999997654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=5.9e-35  Score=253.29  Aligned_cols=217  Identities=21%  Similarity=0.185  Sum_probs=167.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||.+.+.   .+++.||||.+......     ..+.+|+. ++.++||||+++++++...+ .
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   85 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQ---LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT-D   85 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-E
T ss_pred             eccEEEEeeecCCCCeEEEEEEEC---CCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-e
Confidence            358999999999999999999875   35789999998754322     26777777 99999999999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.++|+|||++...
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           86 FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence            599999999999999998776 799999999999999999999875   8999999999999999999999999999876


Q ss_pred             CCCCC-Cccccc----------Cc-ccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN-RRNCEK----------TS-EMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~-~~~~~~----------~~-~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ..... ....++          .. ..+  +||||              |....  .... .+.......+...+..+.+
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  240 (276)
T 2h6d_A          162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFK-KIRGGVFYIPEYLNRSVAT  240 (276)
T ss_dssp             CC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHCCCCCCTTSCHHHHH
T ss_pred             CCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH-HhhcCcccCchhcCHHHHH
Confidence            54332 111111          11 222  99999              11111  1111 0000012234455678999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||+     .||++|||+.++++|
T Consensus       241 li~~~l~-----~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          241 LLMHMLQ-----VDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHHHTC-----SSGGGSCCHHHHHHS
T ss_pred             HHHHHcc-----CChhhCCCHHHHHhC
Confidence            9999999     999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.2e-34  Score=252.16  Aligned_cols=224  Identities=19%  Similarity=0.211  Sum_probs=169.7

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--------hhHHHHHHH-hhCCCCCcccceeeeeeC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--------QTKLEEEIL-LKSSSHLNIVTLLGYPQD  128 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~e~~-l~~l~h~niv~~~~~~~~  128 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.+|+|.+.....        ...+.+|+. +++++||||+++++++..
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   79 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQK---GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN   79 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEc---CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC
Confidence            4578999999999999999999876   3578999999875432        236777888 999999999999999988


Q ss_pred             CCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC----CeeEc
Q 046594          129 GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC----NAKLA  204 (304)
Q Consensus       129 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~----~~kl~  204 (304)
                      .+ ..++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+||+++.++    .+||+
T Consensus        80 ~~-~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~  154 (283)
T 3bhy_A           80 KT-DVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLI  154 (283)
T ss_dssp             SS-EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred             CC-eEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEE
Confidence            74 4599999999999999998765 799999999999999999999765   899999999999998877    89999


Q ss_pred             ccccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc--ceec----cccCCCCCC
Q 046594          205 GFGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLD----QRLYIPNEK  251 (304)
Q Consensus       205 Dfgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~----~~~~~~~~~  251 (304)
                      |||++........ ....++          ...++  +||||              |....  +...    ... .....
T Consensus       155 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~  233 (283)
T 3bhy_A          155 DFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY-DFDEE  233 (283)
T ss_dssp             CCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-CCCHH
T ss_pred             ecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc-CCcch
Confidence            9999987654332 111222          22233  99999              11111  1110    000 00111


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHh
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQ  295 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~  295 (304)
                      .....+..+.+++.+||.     .||++|||+.++++|  ++.+..
T Consensus       234 ~~~~~~~~~~~li~~~l~-----~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          234 YFSNTSELAKDFIRRLLV-----KDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             HHTTCCHHHHHHHHTTSC-----SSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             hcccCCHHHHHHHHHHcc-----CCHhHCcCHHHHHhCHHHHHHHH
Confidence            223446779999999999     999999999999984  455543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.9e-35  Score=260.04  Aligned_cols=225  Identities=18%  Similarity=0.208  Sum_probs=164.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCC-
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~-  131 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++.......     .+.+|+. +++++||||+++++++..... 
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   87 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDL---RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA   87 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred             cCcEEEEEEEccCCCEEEEEEEEC---CCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence            368999999999999999999875   457999999997653222     6677888 999999999999999865432 


Q ss_pred             --ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          132 --RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       132 --~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                        ..|+||||+++|+|.+++...+ .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus        88 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           88 GPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA  163 (311)
T ss_dssp             EEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred             CcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence              3489999999999999998776 799999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC-----Cccccc----------Ccccc--ccccc--------------CCCCc--ceecccc---CCCCCCcc
Q 046594          210 NYCSGGSN-----RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRL---YIPNEKFK  253 (304)
Q Consensus       210 ~~~~~~~~-----~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~---~~~~~~~~  253 (304)
                      ........     ....++          ...++  +||||              |....  +......   ..+.....
T Consensus       164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (311)
T 3ork_A          164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH  243 (311)
T ss_dssp             ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHS
T ss_pred             ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccccc
Confidence            87644322     111122          22233  89999              22111  1100001   00001112


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHH-HHHHHHHh
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVL-SGLKQVKQ  295 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl-~~L~~~~~  295 (304)
                      ...+..+.+++.+||+     .||++||++.+++ ..|.++..
T Consensus       244 ~~~~~~l~~li~~~l~-----~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          244 EGLSADLDAVVLKALA-----KNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             TTCCHHHHHHHHHHTC-----SSGGGSCSSHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHh-----cCHhhChhhHHHHHHHHHHHhc
Confidence            3356789999999999     9999999766555 56666544

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=9.6e-35  Score=267.25  Aligned_cols=218  Identities=19%  Similarity=0.174  Sum_probs=162.6

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----------hHHHHHHH-hhCCCCCcccceeeee
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----------TKLEEEIL-LKSSSHLNIVTLLGYP  126 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~e~~-l~~l~h~niv~~~~~~  126 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.||||++......          ..+.+|+. +++++||||+++++++
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~  209 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFER---KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF  209 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEEC---CCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            4678999999999999999999876   35789999998754211          15677787 9999999999999998


Q ss_pred             eCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC---CeeE
Q 046594          127 QDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC---NAKL  203 (304)
Q Consensus       127 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~---~~kl  203 (304)
                      ... . +++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++   .+||
T Consensus       210 ~~~-~-~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl  283 (419)
T 3i6u_A          210 DAE-D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI  283 (419)
T ss_dssp             ESS-E-EEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred             ecC-c-eEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence            654 3 599999999999999988766 799999999999999999999765   899999999999997544   5999


Q ss_pred             cccccccccCCCCC-Cccccc-----C--------cccc--ccccc--------------CCCCc--ceeccccCCCCCC
Q 046594          204 AGFGAANYCSGGSN-RRNCEK-----T--------SEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEK  251 (304)
Q Consensus       204 ~Dfgla~~~~~~~~-~~~~~~-----~--------~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~  251 (304)
                      +|||+++....... ....++     +        ..++  +||||              |....  ..+...+......
T Consensus       284 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~  363 (419)
T 3i6u_A          284 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN  363 (419)
T ss_dssp             CCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC
T ss_pred             eecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC
Confidence            99999987754432 111222     1        2223  89999              22111  0000000000111


Q ss_pred             cc----hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          252 FK----ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       252 ~~----~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.    ...+..+.+++.+||+     .||++|||+.|+++|
T Consensus       364 ~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          364 FIPEVWAEVSEKALDLVKKLLV-----VDPKARFTTEEALRH  400 (419)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHSC-----SSTTTSCCHHHHHHS
T ss_pred             CCchhhcccCHHHHHHHHHHcc-----CChhHCcCHHHHhCC
Confidence            11    2346789999999999     999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=4.9e-35  Score=268.07  Aligned_cols=213  Identities=15%  Similarity=0.120  Sum_probs=167.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.++   .+++.+|+|++......     ..+.+|.. ++.++||||+++++++.+. ..+
T Consensus        69 ~~y~~~~~LG~G~fG~V~~~~~~---~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-~~~  144 (410)
T 3v8s_A           69 EDYEVVKVIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD-RYL  144 (410)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS-SEE
T ss_pred             cccEEEEEEEcCCCEEEEEEEEC---CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-CEE
Confidence            46888999999999999999886   35789999998753221     15667777 9999999999999999887 555


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+++|+|.+++...  .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       145 ~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~  219 (410)
T 3v8s_A          145 YMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  219 (410)
T ss_dssp             EEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence            9999999999999999765  599999999999999999999765   89999999999999999999999999998765


Q ss_pred             CCCC---CcccccC--------------cccc--ccccc--------------CCCCc------ceeccccCCCCCCcc-
Q 046594          214 GGSN---RRNCEKT--------------SEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFK-  253 (304)
Q Consensus       214 ~~~~---~~~~~~~--------------~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~-  253 (304)
                      ....   ...+++.              +.++  +||||              |....      .++....   ...+| 
T Consensus       220 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~---~~~~p~  296 (410)
T 3v8s_A          220 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN---SLTFPD  296 (410)
T ss_dssp             TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH---HCCCCT
T ss_pred             cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccc---cccCCC
Confidence            4432   2233331              1133  89999              22211      2222111   11222 


Q ss_pred             -hHHHHHHHHHHHHhccccCCCCCCCC--CCCHHHHHHH
Q 046594          254 -ITSLAKLGDIEKWCISCCSNIEGNEN--HPKIVDVLSG  289 (304)
Q Consensus       254 -~~~~~~l~~l~~~cl~~~~~~~dp~~--Rps~~~vl~~  289 (304)
                       ...+..+.+|+.+||.     .+|.+  ||++.|+++|
T Consensus       297 ~~~~s~~~~~li~~lL~-----~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          297 DNDISKEAKNLICAFLT-----DREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             TCCCCHHHHHHHHHHSS-----CGGGCTTSSCHHHHHTS
T ss_pred             cccccHHHHHHHHHHcc-----ChhhhCCCCCHHHHhcC
Confidence             2456889999999999     99998  9999999986

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1e-34  Score=279.70  Aligned_cols=215  Identities=19%  Similarity=0.201  Sum_probs=168.0

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeec
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      +.||+|+||.||++.+... ..++.||||+++.....    ..+.+|+. +++++||||+++++++... . +++||||+
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~-~~lv~E~~  451 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMK-KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-S-WMLVMEMA  451 (635)
T ss_dssp             EEEEECSSEEEEEEEEECS-SCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-S-EEEEEECC
T ss_pred             CEeccCCCEEEEEEEEcCC-CcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-C-EEEEEEcc
Confidence            4799999999999966432 34689999999864332    26777887 9999999999999999654 3 58999999


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---  217 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---  217 (304)
                      ++|+|.+++.... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......   
T Consensus       452 ~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  527 (635)
T 4fl3_A          452 ELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  527 (635)
T ss_dssp             TTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred             CCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence            9999999998765 799999999999999999999765   899999999999999999999999999987754432   


Q ss_pred             --Cccccc----------Ccccc--ccccc--------C-------CCCc-----ceeccccCCCCCCcchHHHHHHHHH
Q 046594          218 --RRNCEK----------TSEMA--EDIND--------F-------VGGQ-----ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       218 --~~~~~~----------~~~~s--~DV~S--------~-------~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                        ....++          ...++  +||||        .       ....     ..+....   ....+..++..+.+|
T Consensus       528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~---~~~~p~~~~~~l~~l  604 (635)
T 4fl3_A          528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE---RMGCPAGCPREMYDL  604 (635)
T ss_dssp             -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTCCHHHHHH
T ss_pred             cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHHHHH
Confidence              111111          12233  99999        1       1111     1122222   344566778899999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +.+||+     .||++|||+.++++.|+.+..
T Consensus       605 i~~cl~-----~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          605 MNLCWT-----YDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             HHHHTC-----SSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHcC-----CCHhHCcCHHHHHHHHHHHHH
Confidence            999999     999999999999999998754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.8e-34  Score=271.45  Aligned_cols=217  Identities=21%  Similarity=0.224  Sum_probs=166.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc---------------hhHHHHHHH-hhCCCCCcccce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---------------QTKLEEEIL-LKSSSHLNIVTL  122 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---------------~~~~~~e~~-l~~l~h~niv~~  122 (304)
                      ..+|++.+.||+|+||.||++.++   ..++.+|+|++.....               ...+.+|+. ++.++||||+++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  111 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEK---NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL  111 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEET---TTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             ccceEEEeEecccCCeEEEEEEEC---CCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            468999999999999999999876   3578999999875431               225677777 999999999999


Q ss_pred             eeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC---
Q 046594          123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC---  199 (304)
Q Consensus       123 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~---  199 (304)
                      ++++.+. ..+++||||+++|+|.+.+.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++   
T Consensus       112 ~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          112 FDVFEDK-KYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             EEEEECS-SEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred             EEEEEcC-CEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence            9999887 45599999999999999998766 799999999999999999999765   899999999999998775   


Q ss_pred             CeeEcccccccccCCCCC-CcccccC---------cccc--ccccc--------------CCCCc--ceeccccCCCCCC
Q 046594          200 NAKLAGFGAANYCSGGSN-RRNCEKT---------SEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEK  251 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~-~~~~~~~---------~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~  251 (304)
                      .+||+|||++........ ....++.         +.++  +||||              |....  ++..... .....
T Consensus       187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-~~~~~  265 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE-KGKYY  265 (504)
T ss_dssp             SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCC
T ss_pred             cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCC
Confidence            699999999987765433 3333332         2233  89999              22111  1111111 00011


Q ss_pred             cc----hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          252 FK----ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       252 ~~----~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++    ...+..+.+++.+||.     .||.+|||+.|+++|
T Consensus       266 ~~~~~~~~~s~~~~~li~~~L~-----~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          266 FDFNDWKNISDEAKELIKLMLT-----YDYNKRCTAEEALNS  302 (504)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             CCccccCCCCHHHHHHHHHHcC-----CChhHCCCHHHHhcC
Confidence            11    3346789999999999     999999999999975

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-34  Score=256.26  Aligned_cols=226  Identities=18%  Similarity=0.167  Sum_probs=168.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .++|++.+.||+|+||.||++.+.   .+++.||+|++......     ..+.+|+. +++++||||+++++++... +.
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-~~  108 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDT---VRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID-GQ  108 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEET---TTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-TE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEc---CCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC-Ce
Confidence            579999999999999999999875   35789999999765332     26677787 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++...
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT  184 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred             EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence            599999999999999998766 799999999999999999999765   8999999999999999999999999998766


Q ss_pred             CCCCC---Cccccc----------Ccccc--ccccc--------------CCCCc-----ceeccccCCCCCCcchHHHH
Q 046594          213 SGGSN---RRNCEK----------TSEMA--EDIND--------------FVGGQ-----ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       213 ~~~~~---~~~~~~----------~~~~s--~DV~S--------------~~~~~-----~~~~~~~~~~~~~~~~~~~~  258 (304)
                      .....   ....++          ...++  +||||              |....     ..+.... ......+...+.
T Consensus       185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  263 (309)
T 2h34_A          185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAI-PRPSTVRPGIPV  263 (309)
T ss_dssp             ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCC-CCGGGTSTTCCT
T ss_pred             cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCC-CCccccCCCCCH
Confidence            44321   111111          12222  99999              21111     1111111 001233455667


Q ss_pred             HHHHHHHHhccccCCCCCCCCCC-CHHHHHHHHHHHHhhhc
Q 046594          259 KLGDIEKWCISCCSNIEGNENHP-KIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rp-s~~~vl~~L~~~~~~~~  298 (304)
                      .+.+++.+||+     .||++|| |+.++++.|+++.+...
T Consensus       264 ~l~~li~~~l~-----~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          264 AFDAVIARGMA-----KNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             HHHHHHHHHTC-----SSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             HHHHHHHHhcc-----CCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            89999999999     9999999 99999999998765443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.8e-34  Score=256.78  Aligned_cols=226  Identities=22%  Similarity=0.244  Sum_probs=167.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCC-CCcccceeeeee-------C
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSS-HLNIVTLLGYPQ-------D  128 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~-h~niv~~~~~~~-------~  128 (304)
                      .+|++.+.||+|+||.||++.+.   .+++.||||++.......  .+.+|+. ++++. ||||+++++++.       .
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDV---GSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEET---TTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             ceEEEEEEEccCCceEEEEEEEC---CCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            48999999999999999999876   357899999986554333  5666676 88885 999999999984       2


Q ss_pred             CCCceEEEEeecCCCChhhHhhh--cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          129 GLQRRCLVFEFMQRGSLRWNLRE--KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       129 ~~~~~~lv~e~~~~gsL~~~l~~--~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                      ....++++|||++ |+|.+++..  ..+.+++..++.++.|++.||+|||+. .++++||||||+|||++.++.+||+||
T Consensus       105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Df  182 (337)
T 3ll6_A          105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDF  182 (337)
T ss_dssp             SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred             CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecC
Confidence            3344699999996 599998875  233799999999999999999999764 123999999999999999999999999


Q ss_pred             ccccccCCCCCC--------------ccccc-------------Ccccc--ccccc--------------CCCCc--cee
Q 046594          207 GAANYCSGGSNR--------------RNCEK-------------TSEMA--EDIND--------------FVGGQ--ECL  241 (304)
Q Consensus       207 gla~~~~~~~~~--------------~~~~~-------------~~~~s--~DV~S--------------~~~~~--~~~  241 (304)
                      |++.........              ...++             ...++  +||||              |....  .+.
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~  262 (337)
T 3ll6_A          183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV  262 (337)
T ss_dssp             TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred             ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh
Confidence            999876542210              00111             12223  89999              11111  222


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          242 DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                      ....   ....+...+..+.+++.+||+     .||.+|||+.+++++|+.+.+...
T Consensus       263 ~~~~---~~~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~e~l~~l~~~~~~~~  311 (337)
T 3ll6_A          263 NGKY---SIPPHDTQYTVFHSLIRAMLQ-----VNPEERLSIAEVVHQLQEIAAARN  311 (337)
T ss_dssp             ---C---CCCTTCCSSGGGHHHHHHHSC-----SSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             cCcc---cCCcccccchHHHHHHHHHcc-----CChhhCcCHHHHHHHHHHHHhccC
Confidence            2222   122233344568899999999     999999999999999999987544

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=5.6e-35  Score=276.70  Aligned_cols=218  Identities=15%  Similarity=0.132  Sum_probs=171.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.++   .+|+.||+|++.....     ...+.+|.. ++.++||||+++++++.+. ..+
T Consensus       184 ~~f~~~~~LG~G~fG~Vy~a~~~---~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~-~~l  259 (576)
T 2acx_A          184 NTFRQYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK-DAL  259 (576)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-SEE
T ss_pred             cceEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC-CEE
Confidence            45888999999999999999886   3579999999965422     125666777 9999999999999999887 455


Q ss_pred             EEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |+||||+++|+|.+++...+. .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence            999999999999999987643 599999999999999999999765   8999999999999999999999999999887


Q ss_pred             CCCCC-CcccccCcc----------cc--ccccc--------------CCCCcc-----eeccccCCCCCCcchHHHHHH
Q 046594          213 SGGSN-RRNCEKTSE----------MA--EDIND--------------FVGGQE-----CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       213 ~~~~~-~~~~~~~~~----------~s--~DV~S--------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      ..... ....++..+          ++  +||||              |.....     .+...+......++...+..+
T Consensus       337 ~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~  416 (576)
T 2acx_A          337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA  416 (576)
T ss_dssp             CTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             ccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHH
Confidence            65544 333444222          23  89999              222110     011111011234566677899


Q ss_pred             HHHHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      .+|+.+||.     .||.+||     ++.|+++|
T Consensus       417 ~dLI~~lL~-----~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          417 RSLCSQLLC-----KDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             HHHHHHHTC-----SSGGGSTTCSSSHHHHHHTS
T ss_pred             HHHHHHhcc-----CCHHHcCCCCCCCHHHHHhC
Confidence            999999999     9999999     78999875

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=7.8e-35  Score=255.03  Aligned_cols=217  Identities=18%  Similarity=0.137  Sum_probs=169.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      .++|++.+.||+|+||.||++.+.   ..++.+|+|.+.....     ...+.+|+. ++.++||||+++++++.+. +.
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~   89 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDA---DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-DF   89 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-SE
T ss_pred             ccceEEEEEEeecCCEEEEEEEEC---CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC-CE
Confidence            358999999999999999999876   3578999999875432     126677777 9999999999999999887 44


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      .++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++...
T Consensus        90 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           90 VFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence            599999999999999988765 799999999999999999999765   8999999999999999999999999999876


Q ss_pred             CCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ....++          ....+  +||||              |....  +...... ......+...+..+.+
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  244 (294)
T 2rku_A          166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-KNEYSIPKHINPVAAS  244 (294)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-TTCCCCCTTSCHHHHH
T ss_pred             ccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-hccCCCccccCHHHHH
Confidence            43222  111222          12223  99999              11111  0000000 0012344556678999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++.+||+     .||++|||+.|++++
T Consensus       245 li~~~l~-----~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          245 LIQKMLQ-----TDPTARPTINELLND  266 (294)
T ss_dssp             HHHHHTC-----SSGGGSCCGGGGGGS
T ss_pred             HHHHHcc-----cChhhCcCHHHHhhC
Confidence            9999999     999999999999986

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-34  Score=259.20  Aligned_cols=219  Identities=21%  Similarity=0.158  Sum_probs=161.2

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-------hHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-------TKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      ..++|++.+.||+|+||.||++.+.   .+|+.||||++......       ..+.+|+. ++.++||||+++++++...
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDK---NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK   84 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECS---SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             HhcccEEEeEEeecCCEEEEEEEEC---CCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence            3578999999999999999999886   35789999998753321       15667777 9999999999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      +.. ++||||+++ +|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus        85 ~~~-~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  159 (346)
T 1ua2_A           85 SNI-SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA  159 (346)
T ss_dssp             TCC-EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred             Cce-EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence            555 999999986 89999887766799999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc-----------Ccccc--ccccc--------------CCCCc------ceecc----cc-CCC-
Q 046594          210 NYCSGGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ------ECLDQ----RL-YIP-  248 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~~~~----~~-~~~-  248 (304)
                      +.......  ....++           ...++  +||||              +....      .++..    .. .++ 
T Consensus       160 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  239 (346)
T 1ua2_A          160 KSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD  239 (346)
T ss_dssp             STTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred             eeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence            87644322  222222           12233  89999              21111      00000    00 000 


Q ss_pred             ------------CCC-----cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          249 ------------NEK-----FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       249 ------------~~~-----~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                  ...     .....+..+.+++.+||.     .||++|||+.|+++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFL-----FNPCARITATQALKM  292 (346)
T ss_dssp             TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHC-----SSTTTSCCHHHHHTS
T ss_pred             hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhc-----cChhhCCCHHHHhcC
Confidence                        000     113345789999999999     999999999999986

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=4.9e-35  Score=260.73  Aligned_cols=217  Identities=18%  Similarity=0.180  Sum_probs=159.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++.......    .+.+|+. +++++||||+++++++.+.+ .+
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~  108 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDT---VTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH-RL  108 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEET---TTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT-EE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEEC---CCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC-EE
Confidence            579999999999999999999875   457999999997554332    4556777 99999999999999998874 45


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-----CCCCeeEccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-----ELCNAKLAGFGA  208 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-----~~~~~kl~Dfgl  208 (304)
                      ++||||+++ +|.+++.... .+++..++.++.|++.||+|||+.   +|+||||||+|||++     .++.+||+|||+
T Consensus       109 ~lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~  183 (329)
T 3gbz_A          109 HLIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL  183 (329)
T ss_dssp             EEEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred             EEEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence            999999985 9999998876 799999999999999999999765   899999999999994     455699999999


Q ss_pred             ccccCCCCC--Cccccc-----------Ccccc--ccccc--------------CCCCc------ceec------c----
Q 046594          209 ANYCSGGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ------ECLD------Q----  243 (304)
Q Consensus       209 a~~~~~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~~~------~----  243 (304)
                      ++.......  ....++           ...++  +||||              |....      .++.      .    
T Consensus       184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP  263 (329)
T ss_dssp             HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence            987653322  111111           12233  89999              22211      0000      0    


Q ss_pred             ------ccCC--C-------CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          244 ------RLYI--P-------NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       244 ------~~~~--~-------~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                            ....  +       ....+...+..+.+|+.+||+     .||++|||+.|+++|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLE-----MDPVKRISAKNALEH  319 (329)
T ss_dssp             TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHcc-----CChhhCCCHHHHhCC
Confidence                  0000  0       000111245778999999999     999999999999874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1e-34  Score=253.43  Aligned_cols=216  Identities=16%  Similarity=0.183  Sum_probs=155.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||+|++.......    .+.++.. ++.++||||+++++++...+. .
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~-~   81 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHV---PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD-V   81 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSS-E
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEec---CCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCC-E
Confidence            468999999999999999999875   467999999997654332    4455555 888999999999999998754 4


Q ss_pred             EEEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          134 CLVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ++||||+++ +|.+++..   .+..+++..++.++.|++.||+|||+.  .|++||||||+||+++.++.+||+|||++.
T Consensus        82 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T 3fme_A           82 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISG  158 (290)
T ss_dssp             EEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred             EEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcc
Confidence            999999975 88877754   334899999999999999999999763  279999999999999999999999999998


Q ss_pred             ccCCCCC-Cccccc--------------Ccccc--ccccc--------------CCCCc-------ceeccccCCCCCCc
Q 046594          211 YCSGGSN-RRNCEK--------------TSEMA--EDIND--------------FVGGQ-------ECLDQRLYIPNEKF  252 (304)
Q Consensus       211 ~~~~~~~-~~~~~~--------------~~~~s--~DV~S--------------~~~~~-------~~~~~~~~~~~~~~  252 (304)
                      ....... ....++              ...++  +||||              |....       .......   ....
T Consensus       159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~  235 (290)
T 3fme_A          159 YLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLP  235 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC---CCCC
T ss_pred             cccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC---CCcc
Confidence            7654333 111121              11223  89999              21111       1111111   1222


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +...+..+.+++.+||+     .||++|||+.|+++|
T Consensus       236 ~~~~~~~~~~li~~~l~-----~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          236 ADKFSAEFVDFTSQCLK-----KNSKERPTYPELMQH  267 (290)
T ss_dssp             TTTSCHHHHHHHHHHTC-----SSGGGSCCHHHHTTS
T ss_pred             cccCCHHHHHHHHHHhh-----cChhhCcCHHHHHhC
Confidence            23456789999999999     999999999999984

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-34  Score=258.51  Aligned_cols=211  Identities=19%  Similarity=0.200  Sum_probs=163.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCC--CcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSH--LNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h--~niv~~~~~~~~~~~~  132 (304)
                      ++|++.+.||+|+||.||++.+.    +++.||||++.......    .+.+|+. +++++|  +||+++++++... ..
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-~~   83 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-QY   83 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECT----TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-SE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeC----CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC-CE
Confidence            57999999999999999998763    57899999987543322    6677777 998876  9999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++|||+ .+|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++ ++.+||+|||+++..
T Consensus        84 ~~lv~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           84 IYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             EEEEECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             EEEEEeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence            5999995 5779999998866 799999999999999999999765   899999999999997 678999999999876


Q ss_pred             CCCCC----CcccccC---------------------cccc--ccccc-----------CCCCc----------ceeccc
Q 046594          213 SGGSN----RRNCEKT---------------------SEMA--EDIND-----------FVGGQ----------ECLDQR  244 (304)
Q Consensus       213 ~~~~~----~~~~~~~---------------------~~~s--~DV~S-----------~~~~~----------~~~~~~  244 (304)
                      .....    ....++.                     ..++  +||||           ..+..          ..+++.
T Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  237 (343)
T 3dbq_A          158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN  237 (343)
T ss_dssp             ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT
T ss_pred             CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCC
Confidence            44322    1112221                     2333  89999           11111          222233


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 LYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 ~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .   ...++...+..+.+++.+||+     .||.+|||+.|+++|
T Consensus       238 ~---~~~~~~~~~~~l~~li~~~L~-----~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          238 H---EIEFPDIPEKDLQDVLKCCLK-----RDPKQRISIPELLAH  274 (343)
T ss_dssp             S---CCCCCCCSCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             c---ccCCcccCCHHHHHHHHHHcC-----CChhHCCCHHHHHhC
Confidence            3   344555666789999999999     999999999999976

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.8e-35  Score=259.72  Aligned_cols=217  Identities=19%  Similarity=0.218  Sum_probs=159.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.++   .+++.||+|++.......   .+.+|+. ++.++||||+++++++...+. +++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~l   77 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSK---LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS-LTL   77 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC-EEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEEC---CCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE-EEE
Confidence            47999999999999999999876   357899999997654332   3345666 999999999999999988744 599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++ +|.+++...+..+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++.....
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           78 VFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             EEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             Eeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence            9999975 99999988776899999999999999999999765   8999999999999999999999999999866433


Q ss_pred             CC--Cccccc-----------Ccccc--ccccc--------------CCCCc--c----ee-------cccc--------
Q 046594          216 SN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ--E----CL-------DQRL--------  245 (304)
Q Consensus       216 ~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~--~----~~-------~~~~--------  245 (304)
                      ..  ....++           ...++  +||||              |....  +    +.       +...        
T Consensus       154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  233 (324)
T 3mtl_A          154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE  233 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred             ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence            22  111111           12233  89999              22211  0    00       0000        


Q ss_pred             ----CCC--C----CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          246 ----YIP--N----EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       246 ----~~~--~----~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                          ..+  .    .......+..+.+|+.+||+     .||++|||+.|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQ-----FEGRNRISAEDAMKH  282 (324)
T ss_dssp             HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSC-----SSGGGSCCHHHHTTS
T ss_pred             hcccccccccchhhhhhcCCCCHHHHHHHHHHcC-----cCcccCCCHHHHhcC
Confidence                000  0    00112345778999999999     999999999999974

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.2e-34  Score=263.96  Aligned_cols=148  Identities=19%  Similarity=0.202  Sum_probs=127.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~---  130 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||||++......    ..+.+|+. ++.++||||+++++++....   
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  101 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDK---NTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK  101 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEET---TTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred             cCCEEEEEEEeecCCEEEEEEEEC---CCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence            358999999999999999999876   35789999999754322    16667777 99999999999999987663   


Q ss_pred             -CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       131 -~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                       ..+|+||||+++ +|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~~lv~e~~~~-~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla  176 (432)
T 3n9x_A          102 FDELYIVLEIADS-DLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA  176 (432)
T ss_dssp             CCCEEEEEECCSE-EHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CCeEEEEEecCCc-CHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence             456999999965 9999998765 799999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCC
Q 046594          210 NYCSG  214 (304)
Q Consensus       210 ~~~~~  214 (304)
                      +....
T Consensus       177 ~~~~~  181 (432)
T 3n9x_A          177 RTINS  181 (432)
T ss_dssp             EEC--
T ss_pred             ccccc
Confidence            87643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=8.7e-35  Score=259.21  Aligned_cols=218  Identities=22%  Similarity=0.223  Sum_probs=162.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||+|++.......    .+.+|+. +++++||||+++++++...+ ..
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   99 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNK---DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK-RW   99 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEET---TTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-EE
T ss_pred             hhhheeeeEEeecCCEEEEEEEEC---CCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC-EE
Confidence            579999999999999999999876   357899999986554332    4567777 99999999999999998874 45


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++++|.+++.... .+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++....
T Consensus       100 ~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (331)
T 4aaa_A          100 YLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA  175 (331)
T ss_dssp             EEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             EEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence            99999999988888766555 799999999999999999999765   89999999999999999999999999997664


Q ss_pred             CCCC--Cccccc-----------Ccccc--ccccc--------------CCCCcc------e------------------
Q 046594          214 GGSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQE------C------------------  240 (304)
Q Consensus       214 ~~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~~------~------------------  240 (304)
                      ....  ....++           ...++  +||||              |.....      +                  
T Consensus       176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (331)
T 4aaa_A          176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN  255 (331)
T ss_dssp             --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred             CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence            4322  111222           11233  89999              222110      0                  


Q ss_pred             ------eccccCC--CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          241 ------LDQRLYI--PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       241 ------~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                            ..+.+..  +........+..+.+++.+||+     .||++|||+.|+++|
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~-----~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLH-----IDPDKRPFCAELLHH  307 (331)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTC-----SSGGGSCCGGGGGGS
T ss_pred             cccccccCccccccchhhhcccchhHHHHHHHHHHhc-----cCcccCCCHHHHhcC
Confidence                  0000000  0000112346789999999999     999999999999975

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=3.3e-35  Score=266.70  Aligned_cols=222  Identities=13%  Similarity=0.056  Sum_probs=161.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHH---H-hhCCCCCccccee-------
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEI---L-LKSSSHLNIVTLL-------  123 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~---~-l~~l~h~niv~~~-------  123 (304)
                      ++|++.+.||+|+||.||++.++   .+|+.||||++.....     ...+.+|+   . +++++||||++++       
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQ---ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC----CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred             ceEEEcceeecCCCEEEEEEEEC---CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence            46888999999999999999885   3579999999874321     12677777   4 6677899999998       


Q ss_pred             eeeeCCCC----------------ceEEEEeecCCCChhhHhhhcCC------CCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 046594          124 GYPQDGLQ----------------RRCLVFEFMQRGSLRWNLREKGG------PLDWEKRLAIALQIDSANQMVCMYSKP  181 (304)
Q Consensus       124 ~~~~~~~~----------------~~~lv~e~~~~gsL~~~l~~~~~------~l~~~~~~~i~~qi~~~l~~Lh~~~~~  181 (304)
                      +++...+.                ..|+||||+ +|+|.+++...+.      .+++..++.++.|++.||+|||+.   
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---  225 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---  225 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---
Confidence            44444322                258999999 5799999986531      233588889999999999999775   


Q ss_pred             CeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Cccccc-------Cc-----------ccc--ccccc------
Q 046594          182 PIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RRNCEK-------TS-----------EMA--EDIND------  233 (304)
Q Consensus       182 ~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~-------~~-----------~~s--~DV~S------  233 (304)
                      +|+||||||+|||++.++.+||+|||+++.......  .+ ..+       ..           .++  +||||      
T Consensus       226 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~  304 (377)
T 3byv_A          226 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY  304 (377)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred             CeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence            899999999999999999999999999986543221  11 111       22           344  89999      


Q ss_pred             -----CCCCc-----ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHH--HHHHHHhhhcc
Q 046594          234 -----FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLS--GLKQVKQLFSS  299 (304)
Q Consensus       234 -----~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~--~L~~~~~~~~~  299 (304)
                           ..+..     .......     ......+..+.+++.+||+     .||++|||+.++++  -++.+.+..+.
T Consensus       305 elltg~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~L~-----~dp~~Rpt~~e~l~hp~f~~~~~~~~~  372 (377)
T 3byv_A          305 WIWCADLPITKDAALGGSEWIF-----RSCKNIPQPVRALLEGFLR-----YPKEDRLLPLQAMETPEYEQLRTELSA  372 (377)
T ss_dssp             HHHHSSCCC------CCSGGGG-----SSCCCCCHHHHHHHHHHTC-----SSGGGCCCHHHHHTSHHHHHHHHHHHH
T ss_pred             HHHHCCCCCcccccccchhhhh-----hhccCCCHHHHHHHHHHcC-----CCchhCCCHHHHhhChHHHHHHHHHHH
Confidence                 11111     1111111     1123456789999999999     99999999999997  35555554433

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.8e-34  Score=263.84  Aligned_cols=216  Identities=16%  Similarity=0.192  Sum_probs=158.2

Q ss_pred             HHhhccc-cccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH--hhCCCCCcccceeeeeeC---CCCc
Q 046594           59 LKRRRML-KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL--LKSSSHLNIVTLLGYPQD---GLQR  132 (304)
Q Consensus        59 ~~~~~~~-~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~--l~~l~h~niv~~~~~~~~---~~~~  132 (304)
                      ..+|++. +.||+|+||.||++.++   .+++.||||++...   ..+.+|+.  ++..+||||+++++++..   +...
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~---~~~~~vAiK~~~~~---~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNK---RTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cccceeccceeeeccCeEEEEEEEC---CCCCEEEEEEeCcc---hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            3567776 68999999999999876   45789999999642   23444444  466699999999998764   2355


Q ss_pred             eEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGA  208 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfgl  208 (304)
                      +|+||||+++|+|.+++..... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.   ++.+||+|||+
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccc
Confidence            7999999999999999987643 699999999999999999999764   8999999999999997   78999999999


Q ss_pred             ccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCcc----------eeccccCCCCCC
Q 046594          209 ANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQE----------CLDQRLYIPNEK  251 (304)
Q Consensus       209 a~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~~----------~~~~~~~~~~~~  251 (304)
                      ++....... ...+++          ...++  +||||              |.....          +....... ...
T Consensus       211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~-~~~  289 (400)
T 1nxk_A          211 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF-PNP  289 (400)
T ss_dssp             CEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC-CTT
T ss_pred             ccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC-CCc
Confidence            987654332 222222          22233  89999              211110          00111100 111


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .....+..+.+|+.+||.     .||++|||+.++++|
T Consensus       290 ~~~~~s~~~~~li~~~L~-----~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          290 EWSEVSEEVKMLIRNLLK-----TEPTQRMTITEFMNH  322 (400)
T ss_dssp             TTTTSCHHHHHHHHTTSC-----SSGGGSCCHHHHHHS
T ss_pred             ccccCCHHHHHHHHHHCC-----CChhHCcCHHHHhcC
Confidence            113466889999999999     999999999999986

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=2.5e-34  Score=252.86  Aligned_cols=214  Identities=19%  Similarity=0.198  Sum_probs=168.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.+.   .+++.||+|++......   ..+.+|+. ++.++||||+++++++...+ .+++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l   97 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDN---RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-KLWI   97 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-EEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEEC---CCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEE
Confidence            57999999999999999999765   35789999999765432   26777787 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++++|.+++...  ++++..+..++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++......
T Consensus        98 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  172 (303)
T 3a7i_A           98 IMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT  172 (303)
T ss_dssp             EEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred             EEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence            99999999999998753  699999999999999999999765   8999999999999999999999999999876543


Q ss_pred             CC--Cccccc----------Ccccc--ccccc--------------CCCCc--c---eeccccCCCCCCcchHHHHHHHH
Q 046594          216 SN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--E---CLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       216 ~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~---~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      ..  ....++          ...++  +||||              +....  .   .+....   ....+...+..+.+
T Consensus       173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~  249 (303)
T 3a7i_A          173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKE  249 (303)
T ss_dssp             BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC---CCCCCSSCCHHHHH
T ss_pred             ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC---CCCCccccCHHHHH
Confidence            32  111222          22223  89999              11111  0   011111   22344455678999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGL  290 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L  290 (304)
                      ++.+||+     .||++|||+.+++++.
T Consensus       250 li~~~l~-----~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          250 FVEACLN-----KEPSFRPTAKELLKHK  272 (303)
T ss_dssp             HHHHHCC-----SSGGGSCCHHHHTTCH
T ss_pred             HHHHHcC-----CChhhCcCHHHHhhCh
Confidence            9999999     9999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=7e-34  Score=255.26  Aligned_cols=148  Identities=21%  Similarity=0.194  Sum_probs=127.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC----
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG----  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~----  129 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||+|++.......    .+.+|+. ++.++||||+++++++...    
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHR---KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY   92 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEET---TTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred             ccceeEEEEEecCCCcEEEEEEEC---CCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence            368999999999999999999876   457999999986544332    5566777 9999999999999998764    


Q ss_pred             ---CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccc
Q 046594          130 ---LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF  206 (304)
Q Consensus       130 ---~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  206 (304)
                         ++.+++||||+++ +|.+.+......+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.+||+||
T Consensus        93 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df  168 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF  168 (351)
T ss_dssp             ----CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred             ccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence               2356999999976 88888877666899999999999999999999765   8999999999999999999999999


Q ss_pred             ccccccC
Q 046594          207 GAANYCS  213 (304)
Q Consensus       207 gla~~~~  213 (304)
                      |+++...
T Consensus       169 g~a~~~~  175 (351)
T 3mi9_A          169 GLARAFS  175 (351)
T ss_dssp             TTCEECC
T ss_pred             hhccccc
Confidence            9998764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=5.6e-35  Score=253.81  Aligned_cols=227  Identities=19%  Similarity=0.174  Sum_probs=168.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeC-CCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQD-GLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~-~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.+|+|.+......    ..+.+|+. +++++||||+++++++.. .+..
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRK---SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT   81 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTE
T ss_pred             hhheeeehhccCCCCcEEEEEEEC---CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCce
Confidence            468999999999999999999876   45799999999754322    26777787 999999999999998754 2355


Q ss_pred             eEEEEeecCCCChhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYS--KPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qi~~~l~~Lh~~~--~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                      +++||||+++|+|.+++....   ..+++..++.++.|++.||+|||+..  ..+++||||||+|||++.++.+||+|||
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            699999999999999987642   25999999999999999999998762  1239999999999999999999999999


Q ss_pred             cccccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHH
Q 046594          208 AANYCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       208 la~~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~  257 (304)
                      ++........  ....++          ...++  +||||              |....  ++............+...+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~  241 (279)
T 2w5a_A          162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS  241 (279)
T ss_dssp             HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSC
T ss_pred             hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccC
Confidence            9987654322  111111          22233  99999              11111  1111000000124455667


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      ..+.+++.+||+     .||++|||+.|+++++..-
T Consensus       242 ~~l~~li~~~l~-----~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          242 DELNEIITRMLN-----LKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             HHHHHHHHHHTC-----SSGGGSCCHHHHHTSTTCC
T ss_pred             HHHHHHHHHHcC-----CCcccCCCHHHHHhChhhh
Confidence            889999999999     9999999999999987543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=4.6e-34  Score=257.22  Aligned_cols=148  Identities=26%  Similarity=0.248  Sum_probs=125.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCC-----CCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSS-----HLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~-----h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++....... .+..|.. ++.++     ||||+++++++...+ 
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~-  109 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHI---DNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD-  109 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT-
T ss_pred             cCEEEEEEEEcccCCeEEEEEEEC---CCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC-
Confidence            368999999999999999999876   357899999997543332 4555555 77775     999999999998874 


Q ss_pred             ceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-------------
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-------------  197 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-------------  197 (304)
                      .+++||||+ +++|.+++..... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.             
T Consensus       110 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~  185 (360)
T 3llt_A          110 HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRV  185 (360)
T ss_dssp             EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred             eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcc
Confidence            459999999 8899999987653 699999999999999999999764   8999999999999975             


Q ss_pred             ------------CCCeeEcccccccccCC
Q 046594          198 ------------LCNAKLAGFGAANYCSG  214 (304)
Q Consensus       198 ------------~~~~kl~Dfgla~~~~~  214 (304)
                                  ++.+||+|||+++....
T Consensus       186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~  214 (360)
T 3llt_A          186 TDGKKIQIYRTKSTGIKLIDFGCATFKSD  214 (360)
T ss_dssp             TTCCEEEEEEESCCCEEECCCTTCEETTS
T ss_pred             cccccccccccCCCCEEEEeccCceecCC
Confidence                        78999999999987554

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.9e-34  Score=261.38  Aligned_cols=148  Identities=27%  Similarity=0.366  Sum_probs=118.0

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCC-CCcccceeeeeeCCC
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSS-HLNIVTLLGYPQDGL  130 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~-h~niv~~~~~~~~~~  130 (304)
                      .+.++|++.+.||+|+||.||++.++   .+++.||||++.......    .+.+|+. ++.+. ||||+++++++...+
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~   82 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDR---RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN   82 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEET---TTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEEC---CCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC
Confidence            45789999999999999999999876   457999999986432211    4445555 88886 999999999997543


Q ss_pred             -CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       131 -~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                       ..+|+||||+++ +|.+++...  .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||++
T Consensus        83 ~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a  156 (388)
T 3oz6_A           83 DRDVYLVFDYMET-DLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS  156 (388)
T ss_dssp             SSCEEEEEECCSE-EHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CCEEEEEecccCc-CHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence             357999999974 999999874  699999999999999999999765   8999999999999999999999999999


Q ss_pred             cccC
Q 046594          210 NYCS  213 (304)
Q Consensus       210 ~~~~  213 (304)
                      +...
T Consensus       157 ~~~~  160 (388)
T 3oz6_A          157 RSFV  160 (388)
T ss_dssp             EESS
T ss_pred             cccc
Confidence            8653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=5.2e-34  Score=276.51  Aligned_cols=217  Identities=17%  Similarity=0.149  Sum_probs=168.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      ..+|++.+.||+|+||.||++.++.   +++.||||+++....     ...+..|.. +..+ +||||+++++++.+. .
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~---~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~-~  415 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-D  415 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESS---SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS-S
T ss_pred             ccceEEEEEEccCCCEEEEEEEECC---CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC-C
Confidence            4679999999999999999999874   578999999875321     124444555 7766 799999999999877 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+|+||||+++|+|.+++...+ .+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            5599999999999999998876 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC--CcccccCccc----------c--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          212 CSGGSN--RRNCEKTSEM----------A--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       212 ~~~~~~--~~~~~~~~~~----------s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ......  ...+++..++          +  +||||              |....  ++....+ .....+|...+..+.
T Consensus       492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~  570 (674)
T 3pfq_A          492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM-EHNVAYPKSMSKEAV  570 (674)
T ss_dssp             CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-SSCCCCCTTSCHHHH
T ss_pred             cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH-hCCCCCCccCCHHHH
Confidence            433222  3334442222          3  89999              22221  1111111 112356667788999


Q ss_pred             HHHHHhccccCCCCCCCCCCCH-----HHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKI-----VDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~-----~~vl~~  289 (304)
                      +|+.+||+     .||++||++     .||++|
T Consensus       571 ~li~~lL~-----~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          571 AICKGLMT-----KHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             HHHHHHSC-----SSSTTCTTCSTTHHHHHHSS
T ss_pred             HHHHHHcc-----CCHHHCCCCCCCcHHHHhcC
Confidence            99999999     999999997     777654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.5e-34  Score=254.99  Aligned_cols=219  Identities=16%  Similarity=0.111  Sum_probs=164.6

Q ss_pred             HHHhhccc-cccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCC-CCCcccceeeeeeCCC
Q 046594           58 ILKRRRML-KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSS-SHLNIVTLLGYPQDGL  130 (304)
Q Consensus        58 ~~~~~~~~-~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l-~h~niv~~~~~~~~~~  130 (304)
                      +..+|.+. +.||+|+||.||++.++   .+++.||+|++......    ..+.+|+. ++.+ .||||+++++++...+
T Consensus        26 ~~~~y~~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~  102 (327)
T 3lm5_A           26 FNNFYILTSKELGRGKFAVVRQCISK---STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS  102 (327)
T ss_dssp             HHHHEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             hhhEEeeccceeCCCCCeEEEEEEEC---CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence            45688887 89999999999999875   45799999998764322    25666666 7777 5699999999998874


Q ss_pred             CceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGF  206 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Df  206 (304)
                       .+++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.   |++||||||+|||++.   ++.+||+||
T Consensus       103 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Df  178 (327)
T 3lm5_A          103 -EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF  178 (327)
T ss_dssp             -EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred             -eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence             4599999999999999986542 3799999999999999999999765   8999999999999997   789999999


Q ss_pred             ccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcc
Q 046594          207 GAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       207 gla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~  253 (304)
                      |+++....... ....++          ...++  +||||              |....      .+...... ......
T Consensus       179 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~  257 (327)
T 3lm5_A          179 GMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD-YSEETF  257 (327)
T ss_dssp             GGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-CCTTTT
T ss_pred             ccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc-cCchhh
Confidence            99987754433 222222          22223  89999              21111      11111110 022333


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ...+..+.+++.+||+     .||++|||+.++++|
T Consensus       258 ~~~~~~~~~li~~~L~-----~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          258 SSVSQLATDFIQSLLV-----KNPEKRPTAEICLSH  288 (327)
T ss_dssp             TTSCHHHHHHHHHHSC-----SSGGGSCCHHHHTTC
T ss_pred             cccCHHHHHHHHHHcC-----CChhhCcCHHHHhCC
Confidence            4567889999999999     999999999999876

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.4e-35  Score=263.83  Aligned_cols=220  Identities=17%  Similarity=0.128  Sum_probs=168.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc------hhHHHHHHH-hhCC-CCCcccceeeeeeCCCC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS------QTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~  131 (304)
                      .+|++.+.||+|+||.||++.+.....+++.||||+++....      ...+..|+. ++.+ +||||+++++++...+ 
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-  132 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET-  132 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc-
Confidence            589999999999999999998754335689999999875321      124555666 8888 7999999999998874 


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~  208 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE  208 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence            4599999999999999998766 799999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC---Cccccc----------C--cccc--ccccc--------------CCCCc------ceeccccCCCCCCcch
Q 046594          212 CSGGSN---RRNCEK----------T--SEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKI  254 (304)
Q Consensus       212 ~~~~~~---~~~~~~----------~--~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~  254 (304)
                      ......   ....++          .  ..++  +||||              |....      .+..... .....++.
T Consensus       209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~  287 (355)
T 1vzo_A          209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL-KSEPPYPQ  287 (355)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH-HCCCCCCT
T ss_pred             cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh-ccCCCCCc
Confidence            543222   111222          1  1223  89999              21111      1111110 01234556


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCC-----CHHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHP-----KIVDVLSGL  290 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~L  290 (304)
                      ..+..+.+|+.+||.     .||.+||     |+.++++|.
T Consensus       288 ~~~~~~~~li~~~L~-----~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          288 EMSALAKDLIQRLLM-----KDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             TSCHHHHHHHHHHTC-----SSGGGSTTSSTTTHHHHHTSG
T ss_pred             ccCHHHHHHHHHHhh-----hCHHHhcCCCCCCHHHHHcCc
Confidence            667889999999999     9999999     999999864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.1e-34  Score=260.16  Aligned_cols=222  Identities=14%  Similarity=0.119  Sum_probs=163.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-------------HHHHHHH-hhCCCCCcccceeee
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-------------KLEEEIL-LKSSSHLNIVTLLGY  125 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~e~~-l~~l~h~niv~~~~~  125 (304)
                      .+|++.+.||+|+||.||++.+......+..+|+|+........             .+.+++. ++.++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            58999999999999999999987543457899999987654221             3445566 889999999999999


Q ss_pred             eeCC---CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC--C
Q 046594          126 PQDG---LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC--N  200 (304)
Q Consensus       126 ~~~~---~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~--~  200 (304)
                      +...   +..+++||||+ +++|.+++...+ .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++  .
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~  191 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ  191 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence            8762   35569999999 889999998776 799999999999999999999765   899999999999999877  9


Q ss_pred             eeEcccccccccCCCCC---------Cccccc----------Ccccc--ccccc-----------CCCCcc---------
Q 046594          201 AKLAGFGAANYCSGGSN---------RRNCEK----------TSEMA--EDIND-----------FVGGQE---------  239 (304)
Q Consensus       201 ~kl~Dfgla~~~~~~~~---------~~~~~~----------~~~~s--~DV~S-----------~~~~~~---------  239 (304)
                      +||+|||+++.......         ....++          ...++  +||||           ..+...         
T Consensus       192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~  271 (345)
T 2v62_A          192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ  271 (345)
T ss_dssp             EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred             EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence            99999999976633211         111222          22233  99999           111110         


Q ss_pred             eeccccCCCCCCcch---------HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          240 CLDQRLYIPNEKFKI---------TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       240 ~~~~~~~~~~~~~~~---------~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      ......   ....+.         ..+..+.+++.+||+     .||++|||+.++++.|+++.
T Consensus       272 ~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          272 TAKTNL---LDELPQSVLKWAPSGSSCCEIAQFLVCAHS-----LAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHH---HHTTTHHHHHHSCTTSCCHHHHHHHHHHHT-----CCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHhh---cccccHHHHhhccccccHHHHHHHHHHHhh-----cCcccCCCHHHHHHHHhccC
Confidence            000001   111121         445689999999999     99999999999999998764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=5.5e-34  Score=266.09  Aligned_cols=227  Identities=15%  Similarity=0.121  Sum_probs=170.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||++........+..|.. ++.++|++.+..+.++.......++||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEET---TTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEEC---CCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            368999999999999999999875   4579999999887665556666777 888988655555554444445569999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee---CCCCCeeEcccccccccCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL---DELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfgla~~~~~  214 (304)
                      ||+ +++|.+++......+++..++.|+.||+.||+|||+.   +|+||||||+|||+   +.++.+||+|||+++....
T Consensus        83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~  158 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD  158 (483)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence            999 8899999987666899999999999999999999765   89999999999999   5889999999999987654


Q ss_pred             CCC---------CcccccCc----------ccc--ccccc--------------CCCCc---------ceeccccCCCCC
Q 046594          215 GSN---------RRNCEKTS----------EMA--EDIND--------------FVGGQ---------ECLDQRLYIPNE  250 (304)
Q Consensus       215 ~~~---------~~~~~~~~----------~~s--~DV~S--------------~~~~~---------~~~~~~~~~~~~  250 (304)
                      ...         ....++..          .++  +||||              |....         .+....+.....
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  238 (483)
T 3sv0_A          159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE  238 (483)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred             CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH
Confidence            432         12223322          223  89999              21111         011111100001


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      .+...++..+.+++.+||+     .||++||++.+|++.|+.+....
T Consensus       239 ~l~~~~p~~l~~li~~cl~-----~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          239 ALCRGYPTEFASYFHYCRS-----LRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             HHHTTSCHHHHHHHHHHHT-----CCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHhcCCcHHHHHHHHHHhc-----CChhhCcCHHHHHHHHHHHHHHc
Confidence            1223445789999999999     99999999999999999987643

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=255.14  Aligned_cols=214  Identities=20%  Similarity=0.184  Sum_probs=162.8

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--------hHHHHHHH-hhCC----CCCcccceee
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--------TKLEEEIL-LKSS----SHLNIVTLLG  124 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~e~~-l~~l----~h~niv~~~~  124 (304)
                      +..+|++.+.||+|+||.||++.+.   .+++.||||++......        ..+..|+. ++++    +||||+++++
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGHRL---TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEECT---TTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhceEEeeEEEcCCCEEEEEEEEc---cCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            3578999999999999999999875   35789999999754321        13334555 6666    8999999999


Q ss_pred             eeeCCCCceEEEEee-cCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCee
Q 046594          125 YPQDGLQRRCLVFEF-MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAK  202 (304)
Q Consensus       125 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~k  202 (304)
                      ++...+.. ++|+|| +++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+||+++ .++.+|
T Consensus       106 ~~~~~~~~-~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k  180 (312)
T 2iwi_A          106 WFETQEGF-MLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK  180 (312)
T ss_dssp             EC-----C-EEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred             EEecCCeE-EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence            99887555 999999 78999999998866 799999999999999999999876   899999999999999 889999


Q ss_pred             EcccccccccCCCCCCccccc-----------Ccccc--ccccc--------------CCCCcceeccccCCCCCCcchH
Q 046594          203 LAGFGAANYCSGGSNRRNCEK-----------TSEMA--EDIND--------------FVGGQECLDQRLYIPNEKFKIT  255 (304)
Q Consensus       203 l~Dfgla~~~~~~~~~~~~~~-----------~~~~s--~DV~S--------------~~~~~~~~~~~~~~~~~~~~~~  255 (304)
                      |+|||++............++           ....+  +||||              |....++....     ..++..
T Consensus       181 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~  255 (312)
T 2iwi_A          181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAE-----LHFPAH  255 (312)
T ss_dssp             ECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTC-----CCCCTT
T ss_pred             EEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhc-----cCCccc
Confidence            999999987755433222222           12222  89999              22222332222     234556


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          256 SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       256 ~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+..+.+++.+||+     .||++|||+.|+++|
T Consensus       256 ~~~~~~~li~~~l~-----~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          256 VSPDCCALIRRCLA-----PKPSSRPSLEEILLD  284 (312)
T ss_dssp             SCHHHHHHHHHHTC-----SSTTTSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            67889999999999     999999999999985

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-33  Score=255.53  Aligned_cols=216  Identities=19%  Similarity=0.160  Sum_probs=158.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCC----
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGL----  130 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~----  130 (304)
                      .+|++.+.||+|+||.||++.+.   .+|+.||||++.......    .+.+|+. ++.++||||+++++++...+    
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  101 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDG---RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD  101 (367)
T ss_dssp             SSEEEEEEC------CEEEEEET---TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             ceEEEeEEeeecCCeEEEEEEEC---CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence            58999999999999999999875   457999999986543222    5667777 99999999999999987653    


Q ss_pred             -CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          131 -QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       131 -~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                       ..+|+||||+ +++|.+++...  .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          102 FTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence             2359999999 77999999874  699999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc-------C-cccc--ccccc--------------CCCCc------ceec---------------
Q 046594          210 NYCSGGSN--RRNCEK-------T-SEMA--EDIND--------------FVGGQ------ECLD---------------  242 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~-------~-~~~s--~DV~S--------------~~~~~------~~~~---------------  242 (304)
                      +.......  ..+..+       . ..++  +||||              |....      .++.               
T Consensus       176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~  255 (367)
T 1cm8_A          176 RQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS  255 (367)
T ss_dssp             EECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred             cccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence            87654322  111111       1 2333  99999              22221      0000               


Q ss_pred             ----------ccc-CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 ----------QRL-YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 ----------~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                +.. ...-.......+..+.+|+.+||.     .||++|||+.++++|
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~-----~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV-----LDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC-----SSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHcc-----CChhHCCCHHHHhcC
Confidence                      000 000011223456789999999999     999999999999985

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.4e-34  Score=262.61  Aligned_cols=218  Identities=19%  Similarity=0.091  Sum_probs=166.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||+|+++.....     ..+.+|.. +..++||||+++++++.+. ..
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~---~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~-~~  135 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMK---QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE-NY  135 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS-SE
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC-CE
Confidence            356889999999999999999886   45799999999753221     15677777 9999999999999999887 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++|+|.+++...+..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       136 ~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheec
Confidence            5999999999999999987655799999999999999999999765   8999999999999999999999999999877


Q ss_pred             CCCCC---CcccccC-----------------cccc--ccccc--------------CCCCc------ceeccccCCCCC
Q 046594          213 SGGSN---RRNCEKT-----------------SEMA--EDIND--------------FVGGQ------ECLDQRLYIPNE  250 (304)
Q Consensus       213 ~~~~~---~~~~~~~-----------------~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~  250 (304)
                      .....   ...+++.                 ..++  +||||              |....      .++.........
T Consensus       213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p  292 (412)
T 2vd5_A          213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLP  292 (412)
T ss_dssp             CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC
T ss_pred             cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCC
Confidence            55432   1223331                 1233  89999              22221      122111100011


Q ss_pred             CcchHHHHHHHHHHHHhccccCCCCCCCCC---CCHHHHHHH
Q 046594          251 KFKITSLAKLGDIEKWCISCCSNIEGNENH---PKIVDVLSG  289 (304)
Q Consensus       251 ~~~~~~~~~l~~l~~~cl~~~~~~~dp~~R---ps~~~vl~~  289 (304)
                      ..+...+..+.+++.+||.      +|.+|   |++.|+++|
T Consensus       293 ~~~~~~s~~~~dli~~lL~------~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          293 LVDEGVPEEARDFIQRLLC------PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             ----CCCHHHHHHHHTTSS------CGGGCTTTTTHHHHHTS
T ss_pred             ccccCCCHHHHHHHHHHcC------ChhhcCCCCCHHHHhcC
Confidence            1224567889999999998      67776   699999875

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.2e-33  Score=255.52  Aligned_cols=220  Identities=20%  Similarity=0.205  Sum_probs=168.8

Q ss_pred             HHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----------hhHHHHHHH-hhCC-CCCccccee
Q 046594           56 LAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----------QTKLEEEIL-LKSS-SHLNIVTLL  123 (304)
Q Consensus        56 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~-l~~l-~h~niv~~~  123 (304)
                      ..+..+|++.+.||+|+||.||++.++   .+|+.||||++.....          ...+..|.. ++++ +||||++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  166 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHR---ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI  166 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEEC---CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            345678999999999999999999875   3579999999876432          114566777 8888 899999999


Q ss_pred             eeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeE
Q 046594          124 GYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL  203 (304)
Q Consensus       124 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl  203 (304)
                      +++... ...++||||+++++|.+++.... .+++..+..++.|++.||+|||+.   |++||||||+|||++.++.++|
T Consensus       167 ~~~~~~-~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl  241 (365)
T 2y7j_A          167 DSYESS-SFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL  241 (365)
T ss_dssp             EEEEBS-SEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred             EEEeeC-CEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence            999887 44599999999999999998765 799999999999999999999765   8999999999999999999999


Q ss_pred             cccccccccCCCCC-CcccccC----------------cccc--ccccc--------------CCCCc------ceeccc
Q 046594          204 AGFGAANYCSGGSN-RRNCEKT----------------SEMA--EDIND--------------FVGGQ------ECLDQR  244 (304)
Q Consensus       204 ~Dfgla~~~~~~~~-~~~~~~~----------------~~~s--~DV~S--------------~~~~~------~~~~~~  244 (304)
                      +|||++........ ....++.                ..++  +||||              |....      .+....
T Consensus       242 ~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~  321 (365)
T 2y7j_A          242 SDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ  321 (365)
T ss_dssp             CCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             EecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence            99999987765433 2222221                1133  89999              21111      111111


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 LYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 ~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ... ........+..+.+++.+||.     .||++|||+.++++|
T Consensus       322 ~~~-~~~~~~~~~~~~~~li~~~L~-----~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          322 YQF-SSPEWDDRSSTVKDLISRLLQ-----VDPEARLTAEQALQH  360 (365)
T ss_dssp             CCC-CHHHHSSSCHHHHHHHHHHSC-----SSTTTSCCHHHHHHS
T ss_pred             CCC-CCcccccCCHHHHHHHHHHcC-----CChhHCcCHHHHhcC
Confidence            100 000112345679999999999     999999999999975

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.3e-34  Score=252.72  Aligned_cols=217  Identities=17%  Similarity=0.151  Sum_probs=164.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.+|+|.+......  ..+..|+. ++.++||||+++++++...+ .+++
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l   93 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNK---ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-KLWI   93 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEET---TTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC--CEEE
T ss_pred             ccceeecceeccCCCeEEEEEEEc---CCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-eEEE
Confidence            468999999999999999999876   35789999998765433  26667777 99999999999999998874 4599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++++|.+++......+++..++.++.|++.||+|||..   +++||||||+|||++.++.+||+|||++......
T Consensus        94 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  170 (302)
T 2j7t_A           94 MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT  170 (302)
T ss_dssp             EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred             EEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence            9999999999999887665899999999999999999999765   8999999999999999999999999987532110


Q ss_pred             ----CC-Ccccc--c----------Ccccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHH
Q 046594          216 ----SN-RRNCE--K----------TSEMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITS  256 (304)
Q Consensus       216 ----~~-~~~~~--~----------~~~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~  256 (304)
                          .. ..+..  .          ...++  +||||              +....  .    +.....  +....+...
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~  248 (302)
T 2j7t_A          171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP--PTLLTPSKW  248 (302)
T ss_dssp             HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC--CCCSSGGGS
T ss_pred             ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC--cccCCcccc
Confidence                00 11100  0          12223  89999              11111  0    000111  011234556


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..+.+++.+||.     .||++|||+.++++|
T Consensus       249 ~~~l~~li~~~l~-----~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          249 SVEFRDFLKIALD-----KNPETRPSAAQLLEH  276 (302)
T ss_dssp             CHHHHHHHHHHSC-----SCTTTSCCHHHHTTS
T ss_pred             CHHHHHHHHHHcc-----cChhhCCCHHHHhcC
Confidence            7889999999999     999999999999874

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.4e-34  Score=255.09  Aligned_cols=219  Identities=19%  Similarity=0.176  Sum_probs=164.4

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-------hhHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-------QTKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      +.++|++.+.||+|+||.||++.+.   .++..+|+|++.....       ...+.+|+. +++++||||+++++++.+.
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIEN---QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhheeecceeeecCCeEEEEEEEC---CCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            4679999999999999999999875   4578999999865421       126777888 9999999999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhc---------------------------------------CCCCCHHHHHHHHHHHHH
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREK---------------------------------------GGPLDWEKRLAIALQIDS  170 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~qi~~  170 (304)
                       ...++||||+++|+|.+++...                                       ...+++..++.++.|++.
T Consensus       101 -~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          101 -QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             -SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             -CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence             4559999999999999988521                                       112467788999999999


Q ss_pred             HHHHHhhcCCCCeeecCCCCCCeeeCCCC--CeeEcccccccccCCCCC------Cccccc------------Ccccc--
Q 046594          171 ANQMVCMYSKPPIYHGNITSDNILLDELC--NAKLAGFGAANYCSGGSN------RRNCEK------------TSEMA--  228 (304)
Q Consensus       171 ~l~~Lh~~~~~~ivH~dlkp~Nill~~~~--~~kl~Dfgla~~~~~~~~------~~~~~~------------~~~~s--  228 (304)
                      ||+|||+.   +|+||||||+|||++.++  .+||+|||+++.......      ....++            ...++  
T Consensus       180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            99999765   899999999999998776  899999999986532111      111111            13333  


Q ss_pred             ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHH
Q 046594          229 EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLS  288 (304)
Q Consensus       229 ~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~  288 (304)
                      +||||              |....      .+....... ........+..+.+++.+||+     .||.+|||+.++++
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~-----~~p~~Rps~~~~l~  330 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF-ENPNYNVLSPLARDLLSNLLN-----RNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCT-TSGGGGGSCHHHHHHHHHHSC-----SCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccccc-CCcccccCCHHHHHHHHHHcC-----CChhHCCCHHHHhc
Confidence            99999              21111      122222200 111223456889999999999     99999999999998


Q ss_pred             H
Q 046594          289 G  289 (304)
Q Consensus       289 ~  289 (304)
                      |
T Consensus       331 h  331 (345)
T 3hko_A          331 H  331 (345)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=8.2e-34  Score=249.55  Aligned_cols=219  Identities=17%  Similarity=0.140  Sum_probs=164.8

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc------hhHHHHHHH-hhCCCCCcccceeeeeeCC-
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS------QTKLEEEIL-LKSSSHLNIVTLLGYPQDG-  129 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~-l~~l~h~niv~~~~~~~~~-  129 (304)
                      +.++|++.+.||+|+||.||++.+.   .+++.+|+|++.....      ...+.+|+. +++++||||+++++++... 
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   79 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDS---ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE   79 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBT---TTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-
T ss_pred             cccceeEeeEEecCCCeEEEEEEEC---CCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence            3578999999999999999999875   4578999999975431      226778888 9999999999999998543 


Q ss_pred             CCceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      ...+++||||++++ |.+++.... ..+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||+
T Consensus        80 ~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~  155 (305)
T 2wtk_C           80 KQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGV  155 (305)
T ss_dssp             --CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             CCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccc
Confidence            34569999999885 777776543 3799999999999999999999765   899999999999999999999999999


Q ss_pred             ccccCCCCC----Cccccc------------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcch
Q 046594          209 ANYCSGGSN----RRNCEK------------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKI  254 (304)
Q Consensus       209 a~~~~~~~~----~~~~~~------------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~  254 (304)
                      +........    ....++            ....+  +||||              |....  +.... +......++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-i~~~~~~~~~  234 (305)
T 2wtk_C          156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN-IGKGSYAIPG  234 (305)
T ss_dssp             CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHCCCCCCS
T ss_pred             ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH-HhcCCCCCCC
Confidence            987643221    111122            11223  89999              21111  11110 0000123445


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+..+.+++.+||+     .||.+|||+.++++|
T Consensus       235 ~~~~~l~~li~~~l~-----~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          235 DCGPPLSDLLKGMLE-----YEPAKRFSIRQIRQH  264 (305)
T ss_dssp             SSCHHHHHHHHHHTC-----SSTTTSCCHHHHHHS
T ss_pred             ccCHHHHHHHHHHcc-----CChhhCCCHHHHhcC
Confidence            567889999999999     999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.4e-34  Score=257.54  Aligned_cols=227  Identities=17%  Similarity=0.164  Sum_probs=168.1

Q ss_pred             HhhccccccCCccccceeeecceeecC-----CCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccc------------
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSR-----NLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVT------------  121 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~------------  121 (304)
                      ++|++.+.||+|+||.||++.+..+..     +++.||+|.+...   ..+.+|+. +++++||||++            
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  118 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA  118 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence            589999999999999999999875322     4789999998754   35666677 99999999988            


Q ss_pred             ---eeeeeeCCCCceEEEEeecCCCChhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC
Q 046594          122 ---LLGYPQDGLQRRCLVFEFMQRGSLRWNLREK-GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE  197 (304)
Q Consensus       122 ---~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~  197 (304)
                         +++++...+..+++||||+ +++|.+++... ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.
T Consensus       119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDP  194 (352)
T ss_dssp             CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEET
T ss_pred             ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcC
Confidence               5666666556679999999 88999999876 23799999999999999999999765   8999999999999999


Q ss_pred             CC--CeeEcccccccccCCCCC---------Cccccc----------Ccccc--ccccc-----------CCCCcc----
Q 046594          198 LC--NAKLAGFGAANYCSGGSN---------RRNCEK----------TSEMA--EDIND-----------FVGGQE----  239 (304)
Q Consensus       198 ~~--~~kl~Dfgla~~~~~~~~---------~~~~~~----------~~~~s--~DV~S-----------~~~~~~----  239 (304)
                      ++  .+||+|||+++.......         ....++          ...++  +||||           ..+...    
T Consensus       195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  274 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN  274 (352)
T ss_dssp             TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence            98  999999999976643221         111222          22233  99999           111110    


Q ss_pred             ---eec--cccCCCCCCcc------hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhc
Q 046594          240 ---CLD--QRLYIPNEKFK------ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFS  298 (304)
Q Consensus       240 ---~~~--~~~~~~~~~~~------~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~  298 (304)
                         +..  ..+......+.      ...+..+.+++.+||+     .||++|||+.++++.|+++.+...
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMA-----LTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHT-----CCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHh-----CChhhCCCHHHHHHHHHHHHHhcC
Confidence               000  00000001111      1346889999999999     999999999999999999987654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=4.2e-34  Score=250.93  Aligned_cols=219  Identities=18%  Similarity=0.222  Sum_probs=151.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.+..   +++.||||.+.......   .+.+|+. +++++||||+++++++...+.. +
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~   89 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAP---KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL-W   89 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC-------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCE-E
T ss_pred             hhhhhhhheeccccceEEEEEEECC---CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc-E
Confidence            4589999999999999999998763   46899999987543322   6677788 9999999999999999888554 9


Q ss_pred             EEEeecCCCChhhHhhh-------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          135 LVFEFMQRGSLRWNLRE-------KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                      +||||+++++|.+++..       ....+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg  166 (303)
T 2vwi_A           90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG  166 (303)
T ss_dssp             EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred             EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence            99999999999999874       233699999999999999999999765   89999999999999999999999999


Q ss_pred             cccccCCCCC-------CcccccC-----------cccc--ccccc--------------CCCCc--c----eecc---c
Q 046594          208 AANYCSGGSN-------RRNCEKT-----------SEMA--EDIND--------------FVGGQ--E----CLDQ---R  244 (304)
Q Consensus       208 la~~~~~~~~-------~~~~~~~-----------~~~s--~DV~S--------------~~~~~--~----~~~~---~  244 (304)
                      ++........       ....++.           ..++  +||||              |....  .    ....   .
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  246 (303)
T 2vwi_A          167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS  246 (303)
T ss_dssp             HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC
T ss_pred             chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc
Confidence            9876543211       1111111           1223  99999              11111  0    0000   0


Q ss_pred             cC--CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 LY--IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 ~~--~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..  ..........+..+.+++.+||+     .||.+|||+.++++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~l~-----~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          247 LETGVQDKEMLKKYGKSFRKMISLCLQ-----KDPEKRPTAAELLRH  288 (303)
T ss_dssp             TTC-----CCCCCCCHHHHHHHHHHCC-----SSGGGSCCHHHHHTS
T ss_pred             cccccccchhhhhhhHHHHHHHHHHcc-----CChhhCcCHHHHhhC
Confidence            00  00111223445789999999999     999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=8e-34  Score=258.75  Aligned_cols=211  Identities=19%  Similarity=0.189  Sum_probs=162.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCC--CCcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSS--HLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~--h~niv~~~~~~~~~~~~  132 (304)
                      ++|++.+.||+|+||.||++.+.    +++.||||++......    ..+.+|+. +++++  ||||+++++++...+ .
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~-~  130 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-Y  130 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-E
T ss_pred             CceEEEEEEccCCCeEEEEEEcC----CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC-E
Confidence            46999999999999999998764    4789999999754322    26677777 88886  599999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||| +.+++|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++ ++.+||+|||+++..
T Consensus       131 ~~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          131 IYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM  204 (390)
T ss_dssp             EEEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred             EEEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence            599999 55779999998876 799999999999999999999654   899999999999996 579999999999876


Q ss_pred             CCCCC----CcccccC---------------------cccc--ccccc-----------CCCCc----------ceeccc
Q 046594          213 SGGSN----RRNCEKT---------------------SEMA--EDIND-----------FVGGQ----------ECLDQR  244 (304)
Q Consensus       213 ~~~~~----~~~~~~~---------------------~~~s--~DV~S-----------~~~~~----------~~~~~~  244 (304)
                      .....    ....++.                     ..++  +||||           ..+..          .++++.
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~  284 (390)
T 2zmd_A          205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN  284 (390)
T ss_dssp             ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTT
T ss_pred             cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcc
Confidence            54322    1222221                     1233  89999           11111          122233


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 LYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 ~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .   ...++...+..+.+++.+||+     .||.+|||+.|+++|
T Consensus       285 ~---~~~~~~~~~~~~~~li~~~L~-----~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          285 H---EIEFPDIPEKDLQDVLKCCLK-----RDPKQRISIPELLAH  321 (390)
T ss_dssp             S---CCCCCCCSCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             c---cCCCCccchHHHHHHHHHHcc-----cChhhCCCHHHHhhC
Confidence            3   234445556789999999999     999999999999976

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1e-33  Score=247.51  Aligned_cols=209  Identities=11%  Similarity=-0.002  Sum_probs=162.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ++|++.+.||+|+||.||++.+.   ..++.||||++......     ..+.+|.. +++++||||+++++++...+ ..
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-~~  106 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDT---ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA-GG  106 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEET---TTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-EE
T ss_pred             CcEEEEEEEcccCCeEEEEEEec---CCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC-cE
Confidence            58999999999999999999875   35799999999865432     25667777 99999999999999998874 45


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+++++|.+++...   ....++..++.|++.||+|||+.   ||+||||||+|||++.++.+||+++|...   
T Consensus       107 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~~---  177 (286)
T 3uqc_A          107 LVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATMP---  177 (286)
T ss_dssp             EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCCT---
T ss_pred             EEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccccC---
Confidence            9999999999999999642   45667899999999999999765   89999999999999999999999776432   


Q ss_pred             CCCCCcccccCccccccccc--------------CCCCcc--ee---ccccCC---CCCCcchHHHHHHHHHHHHhcccc
Q 046594          214 GGSNRRNCEKTSEMAEDIND--------------FVGGQE--CL---DQRLYI---PNEKFKITSLAKLGDIEKWCISCC  271 (304)
Q Consensus       214 ~~~~~~~~~~~~~~s~DV~S--------------~~~~~~--~~---~~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~  271 (304)
                                .....+||||              |.....  .+   ......   +........+..+.+++.+||+  
T Consensus       178 ----------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~--  245 (286)
T 3uqc_A          178 ----------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQ--  245 (286)
T ss_dssp             ----------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHC--
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcc--
Confidence                      1122299999              322221  11   111100   0011224566889999999999  


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          272 SNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       272 ~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                         .||++| |+.++++.|+++....
T Consensus       246 ---~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          246 ---GDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             ---TTSSCC-CHHHHHHHHHHHHC--
T ss_pred             ---cCCccC-CHHHHHHHHHHHhccC
Confidence               999999 9999999999987644

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=3e-33  Score=252.61  Aligned_cols=221  Identities=14%  Similarity=0.064  Sum_probs=163.5

Q ss_pred             HhhccccccCCccccceeeeccee--ecCCCcEEEEEEeccccchhHHHHHHH-hhCCC---CCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRA--VSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS---HLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~---h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.+..  ....++.||||++....... +..+.. ++.++   |+||+++++++...+.. 
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~-  142 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWE-FYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS-  142 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHH-HHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE-
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhH-HHHHHHHHHHhhhhhhhhhhhhheeeecCCCc-
Confidence            578999999999999999995432  12467999999998755443 334444 55555   99999999999988555 


Q ss_pred             EEEEeecCCCChhhHhhhc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-----------C
Q 046594          134 CLVFEFMQRGSLRWNLREK----GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-----------L  198 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-----------~  198 (304)
                      ++||||+++|+|.+++...    ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.           +
T Consensus       143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------C
T ss_pred             EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccccc
Confidence            9999999999999999752    33799999999999999999999664   8999999999999998           8


Q ss_pred             CCeeEcccccccccCCC---CC-CcccccCc----------ccc--ccccc-----------CCCCc------ceecccc
Q 046594          199 CNAKLAGFGAANYCSGG---SN-RRNCEKTS----------EMA--EDIND-----------FVGGQ------ECLDQRL  245 (304)
Q Consensus       199 ~~~kl~Dfgla~~~~~~---~~-~~~~~~~~----------~~s--~DV~S-----------~~~~~------~~~~~~~  245 (304)
                      +.+||+|||+++.....   .. ....++.+          .++  +||||           .....      ......+
T Consensus       220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~  299 (365)
T 3e7e_A          220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLF  299 (365)
T ss_dssp             TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEECSCC
T ss_pred             CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeechhc
Confidence            99999999999755321   11 22333322          233  89999           11111      1112222


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCC-CCHHHHHHHHHHHHhh
Q 046594          246 YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENH-PKIVDVLSGLKQVKQL  296 (304)
Q Consensus       246 ~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~R-ps~~~vl~~L~~~~~~  296 (304)
                          ...  .....+.+++..|++     .+|.+| |++.++.+.|+.+.+.
T Consensus       300 ----~~~--~~~~~~~~~~~~~l~-----~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          300 ----RRL--PHLDMWNEFFHVMLN-----IPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             ----TTC--SSHHHHHHHHHHHHC-----CCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----ccc--CcHHHHHHHHHHHcC-----CCCCCcchHHHHHHHHHHHHHHH
Confidence                111  235667899999999     999998 5788888888887654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=4.3e-34  Score=253.65  Aligned_cols=217  Identities=19%  Similarity=0.157  Sum_probs=163.7

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----------hhHHHHHHH-hhCCCCCcccceeeee
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----------QTKLEEEIL-LKSSSHLNIVTLLGYP  126 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~-l~~l~h~niv~~~~~~  126 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.||||.+.....          ...+.+|+. +++++||||+++++++
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   84 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFER---KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF   84 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEc---CCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence            4679999999999999999999876   3578999999875421          115677777 9999999999999998


Q ss_pred             eCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC---eeE
Q 046594          127 QDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN---AKL  203 (304)
Q Consensus       127 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~---~kl  203 (304)
                      ... . +++||||+++|+|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+|||++.++.   +||
T Consensus        85 ~~~-~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl  158 (322)
T 2ycf_A           85 DAE-D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI  158 (322)
T ss_dssp             ESS-S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEE
T ss_pred             cCC-c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEE
Confidence            765 3 599999999999999988765 799999999999999999999765   8999999999999987654   999


Q ss_pred             cccccccccCCCCC-Cccccc-------------Ccccc--ccccc--------------CCCCc---c----eeccccC
Q 046594          204 AGFGAANYCSGGSN-RRNCEK-------------TSEMA--EDIND--------------FVGGQ---E----CLDQRLY  246 (304)
Q Consensus       204 ~Dfgla~~~~~~~~-~~~~~~-------------~~~~s--~DV~S--------------~~~~~---~----~~~~~~~  246 (304)
                      +|||++........ ....++             ...++  +||||              |....   .    +..... 
T Consensus       159 ~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-  237 (322)
T 2ycf_A          159 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-  237 (322)
T ss_dssp             CCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC-
T ss_pred             ccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc-
Confidence            99999987654321 111111             12223  99999              21111   0    001111 


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..........+..+.+++.+||.     .||++|||+.++++|
T Consensus       238 ~~~~~~~~~~~~~~~~li~~~l~-----~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          238 NFIPEVWAEVSEKALDLVKKLLV-----VDPKARFTTEEALRH  275 (322)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHSC-----SSTTTSCCHHHHHTS
T ss_pred             ccCchhhhhcCHHHHHHHHHHcc-----cCHhhCCCHHHHhhC
Confidence            00011123346789999999999     999999999999864

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2.1e-33  Score=249.71  Aligned_cols=214  Identities=16%  Similarity=0.186  Sum_probs=162.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCC-CCcccceeeeeeCC-CCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS-HLNIVTLLGYPQDG-LQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~-h~niv~~~~~~~~~-~~~~~lv  136 (304)
                      .+|++.+.||+|+||.||++.+.   .+++.||+|++..... ..+.+|+. ++.++ ||||+++++++... ....++|
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~-~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINI---TNNEKVVVKILKPVKK-KKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECSCCH-HHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEEC---CCCcEEEEEEecccch-HHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            68999999999999999999875   4579999999975443 35666676 88886 99999999999873 2445999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.+++.    .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++ .+||+|||+++.....
T Consensus       112 ~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  184 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  184 (330)
T ss_dssp             EECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             EeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence            99999999999885    488999999999999999999765   899999999999999776 8999999999876544


Q ss_pred             CC-Cccccc----------C-cccc--ccccc--------------CCCCcc-------------------eec------
Q 046594          216 SN-RRNCEK----------T-SEMA--EDIND--------------FVGGQE-------------------CLD------  242 (304)
Q Consensus       216 ~~-~~~~~~----------~-~~~s--~DV~S--------------~~~~~~-------------------~~~------  242 (304)
                      .. ....++          . ..++  +||||              |.....                   .++      
T Consensus       185 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  264 (330)
T 3nsz_A          185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL  264 (330)
T ss_dssp             CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence            33 222222          1 2233  89999              111100                   000      


Q ss_pred             -cc------------c-CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 -QR------------L-YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 -~~------------~-~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                       +.            . .......+...+..+.+++.+||+     .||++|||+.|+++|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-----YDHQSRLTAREAMEH  320 (330)
T ss_dssp             CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSC-----SSGGGSCCHHHHHTS
T ss_pred             ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhc-----CCcccCCCHHHHhcC
Confidence             00            0 000111223356889999999999     999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.7e-33  Score=246.32  Aligned_cols=216  Identities=21%  Similarity=0.156  Sum_probs=163.9

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      |.....||+|+||.||++.+.   .++..||+|.+.......  .+.+|+. ++.++||||+++++++...+ ..++|||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e   99 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDL---SNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-FIKIFME   99 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEET---TTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT-EEEEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEEC---CCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC-cEEEEEE
Confidence            444558999999999999875   357899999997654332  6777887 99999999999999998874 4599999


Q ss_pred             ecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEcccccccccCCC
Q 046594          139 FMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfgla~~~~~~  215 (304)
                      |+++++|.+++.....  .+++..+..++.|++.||+|||+.   +++||||||+||+++. ++.+||+|||++......
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~  176 (295)
T 2clq_A          100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI  176 (295)
T ss_dssp             CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred             eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence            9999999999987643  567899999999999999999765   8999999999999987 899999999999876543


Q ss_pred             CC--Cccccc----------C--cccc--ccccc-----------CCCCcc-------eeccccCCCCCCcchHHHHHHH
Q 046594          216 SN--RRNCEK----------T--SEMA--EDIND-----------FVGGQE-------CLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       216 ~~--~~~~~~----------~--~~~s--~DV~S-----------~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ..  ....++          .  ..++  +||||           ..+...       .............+...+..+.
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (295)
T 2clq_A          177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK  256 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHH
T ss_pred             CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHH
Confidence            22  111122          1  1133  99999           111110       0000000012345566778899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++.+||+     .||++|||+.+++++
T Consensus       257 ~li~~~l~-----~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          257 AFILKCFE-----PDPDKRACANDLLVD  279 (295)
T ss_dssp             HHHHHTTC-----SSTTTSCCHHHHHTS
T ss_pred             HHHHHHcc-----CChhhCCCHHHHhcC
Confidence            99999999     999999999999874

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=7.7e-34  Score=255.55  Aligned_cols=223  Identities=17%  Similarity=0.125  Sum_probs=153.4

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCC---
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ---  131 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~---  131 (304)
                      ....+|++.+.||+|+||.||++.++   .+++.||||++....... ...+++. ++.++||||+++++++...+.   
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEK---STGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR   96 (360)
T ss_dssp             HHHTTEEEC----------CEEEEET---TTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred             hhccceEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence            34679999999999999999999876   357899999986544333 4555565 888999999999999865322   


Q ss_pred             ---ceEEEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-CCCeeEc
Q 046594          132 ---RRCLVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-LCNAKLA  204 (304)
Q Consensus       132 ---~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-~~~~kl~  204 (304)
                         .+++||||+++ +|.+.+..   ....+++..+..++.|++.||+|||. |+.+|+||||||+|||++. ++.+||+
T Consensus        97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~kl~  174 (360)
T 3e3p_A           97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLKLC  174 (360)
T ss_dssp             TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred             cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence               25899999987 66554442   23378999999999999999999974 3679999999999999996 8999999


Q ss_pred             ccccccccCCCCC-Cccccc-----------Ccccc--ccccc--------------CCCCc------ceec--------
Q 046594          205 GFGAANYCSGGSN-RRNCEK-----------TSEMA--EDIND--------------FVGGQ------ECLD--------  242 (304)
Q Consensus       205 Dfgla~~~~~~~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~~~--------  242 (304)
                      |||+++....... ....++           ...++  +||||              |....      .+..        
T Consensus       175 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  254 (360)
T 3e3p_A          175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE  254 (360)
T ss_dssp             CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             eCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence            9999987765443 222222           12233  89999              22111      0000        


Q ss_pred             ------ccc-----CCC--------CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 ------QRL-----YIP--------NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 ------~~~-----~~~--------~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                            +..     ...        ....+...+..+.+|+.+||+     .||.+|||+.|+++|
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ-----YLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTC-----SSGGGSCCHHHHTTS
T ss_pred             HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhc-----cCccccCCHHHHhcC
Confidence                  000     000        011122356789999999999     999999999999986

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.1e-33  Score=250.04  Aligned_cols=216  Identities=17%  Similarity=0.187  Sum_probs=159.7

Q ss_pred             Hhhccc-cccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhC-CCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRML-KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKS-SSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~-~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~-l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++. +.||+|+||.||++.+.   .+++.||||++......  ..+.+|+. +.+ .+||||+++++++.+.+ .++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~-~~~   87 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINL---ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED-RFY   87 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECS---SSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-EEE
T ss_pred             eeEEecCceecCCceEEEEEEEEc---CCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-EEE
Confidence            578885 78999999999999876   35789999999765432  35666666 776 58999999999998874 559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC---eeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN---AKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~---~kl~Dfgla~~  211 (304)
                      +||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.   +||+|||++..
T Consensus        88 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A           88 LVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             EEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence            9999999999999998766 799999999999999999999765   8999999999999998775   99999999876


Q ss_pred             cCCCCC---------CcccccC---------------cccc--ccccc--------------CCCCcc------------
Q 046594          212 CSGGSN---------RRNCEKT---------------SEMA--EDIND--------------FVGGQE------------  239 (304)
Q Consensus       212 ~~~~~~---------~~~~~~~---------------~~~s--~DV~S--------------~~~~~~------------  239 (304)
                      ......         ....++.               ..++  +||||              |.....            
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  243 (316)
T 2ac3_A          164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP  243 (316)
T ss_dssp             ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred             cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence            542211         1111221               1223  89999              211100            


Q ss_pred             -----eeccccCCCCCCcc----hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          240 -----CLDQRLYIPNEKFK----ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       240 -----~~~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                           +.. .+......++    ...+..+.+++.+||+     .||++|||+.|+++|
T Consensus       244 ~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          244 ACQNMLFE-SIQEGKYEFPDKDWAHISCAAKDLISKLLV-----RDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHH-HHHHCCCCCCHHHHTTSCHHHHHHHHHHSC-----SSTTTSCCHHHHHHS
T ss_pred             hHHHHHHH-HHhccCcccCchhcccCCHHHHHHHHHHhh-----CChhhCCCHHHHhcC
Confidence                 000 0000011222    2345789999999999     999999999999985

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.1e-33  Score=246.73  Aligned_cols=209  Identities=17%  Similarity=0.242  Sum_probs=159.8

Q ss_pred             HHhhccc-cccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH--hhCCCCCcccceeeeeeC---CCCc
Q 046594           59 LKRRRML-KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL--LKSSSHLNIVTLLGYPQD---GLQR  132 (304)
Q Consensus        59 ~~~~~~~-~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~--l~~l~h~niv~~~~~~~~---~~~~  132 (304)
                      ..+|++. +.||+|+||.||++.++   .+++.||+|++...   ..+.+|+.  ++..+||||+++++++..   .+..
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNK---RTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEc---CCCcEEEEEEeccc---HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            3578887 77999999999999876   45789999999642   23444444  477799999999999865   2355


Q ss_pred             eEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGA  208 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfgl  208 (304)
                      +++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.   +++||||||+|||++.   ++.+||+|||+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            6999999999999999987653 799999999999999999999765   8999999999999998   78999999999


Q ss_pred             ccccCCCCCCcccccCccccccccc--------------CCCCc--ce---eccccCCCCCCcc----hHHHHHHHHHHH
Q 046594          209 ANYCSGGSNRRNCEKTSEMAEDIND--------------FVGGQ--EC---LDQRLYIPNEKFK----ITSLAKLGDIEK  265 (304)
Q Consensus       209 a~~~~~~~~~~~~~~~~~~s~DV~S--------------~~~~~--~~---~~~~~~~~~~~~~----~~~~~~l~~l~~  265 (304)
                      +.......        ....+||||              |....  ..   ...........++    ...+..+.+++.
T Consensus       167 a~~~~~~~--------~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  238 (299)
T 3m2w_A          167 AKETTGEK--------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR  238 (299)
T ss_dssp             CEECTTCG--------GGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHH
T ss_pred             cccccccc--------CCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHH
Confidence            97664321        112299999              21111  00   0111100111222    345688999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHH
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +||+     .||++|||+.|+++|
T Consensus       239 ~~l~-----~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          239 NLLK-----TEPTQRMTITEFMNH  257 (299)
T ss_dssp             HHTC-----SSTTTSCCHHHHHTS
T ss_pred             HHcc-----cChhhCCCHHHHhcC
Confidence            9999     999999999999985

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.4e-34  Score=260.41  Aligned_cols=221  Identities=10%  Similarity=-0.008  Sum_probs=151.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHH---H-hhCCCCCccccee-------e
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEI---L-LKSSSHLNIVTLL-------G  124 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~---~-l~~l~h~niv~~~-------~  124 (304)
                      .|++.+.||+|+||.||++.++   .+++.||||++.......     .+++|+   . |+. +||||++++       +
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d  138 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDV---ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSD  138 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCE
T ss_pred             eeeeeeeccCCCCEEEEEEEEC---CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeeh
Confidence            4888999999999999999875   357899999998755321     556663   3 666 899988755       3


Q ss_pred             eeeCCC----------------CceEEEEeecCCCChhhHhhhcCCCCCHHHH------HHHHHHHHHHHHHHhhcCCCC
Q 046594          125 YPQDGL----------------QRRCLVFEFMQRGSLRWNLREKGGPLDWEKR------LAIALQIDSANQMVCMYSKPP  182 (304)
Q Consensus       125 ~~~~~~----------------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~------~~i~~qi~~~l~~Lh~~~~~~  182 (304)
                      ++...+                ..+|+||||++ |+|.+++...+..+++..+      ..++.|++.||+|||+.   +
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~  214 (371)
T 3q60_A          139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---G  214 (371)
T ss_dssp             EEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             heecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence            332221                23699999998 7999999876445566666      78889999999999765   8


Q ss_pred             eeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Cccccc-------C--cccc--ccccc--------------CC
Q 046594          183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RRNCEK-------T--SEMA--EDIND--------------FV  235 (304)
Q Consensus       183 ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~-------~--~~~s--~DV~S--------------~~  235 (304)
                      |+||||||+|||++.++.+||+|||+++.......  ..+..+       .  ..++  +||||              |.
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  294 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG  294 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999987754431  111111       2  3344  99999              21


Q ss_pred             CCc----ceec---------cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHhhh
Q 046594          236 GGQ----ECLD---------QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQLF  297 (304)
Q Consensus       236 ~~~----~~~~---------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~~~  297 (304)
                      ...    ....         ...   ........+..+.+++.+||+     .||++|||+.++++|  ++++....
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~e~l~hp~f~~~~~~~  363 (371)
T 3q60_A          295 LVTPGIKGSWKRPSLRVPGTDSL---AFGSCTPLPDFVKTLIGRFLN-----FDRRRRLLPLEAMETPEFLQLQNEI  363 (371)
T ss_dssp             BCCTTCTTCCCBCCTTSCCCCSC---CCTTSSCCCHHHHHHHHHHTC-----SSTTTCCCHHHHTTSHHHHHHHHHH
T ss_pred             CcCcccccchhhhhhhhcccccc---chhhccCCCHHHHHHHHHHcC-----CChhhCCCHHHHhcCHHHHHHHHHH
Confidence            110    0000         011   111223567889999999999     999999999999863  44444433

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.7e-33  Score=245.79  Aligned_cols=220  Identities=18%  Similarity=0.174  Sum_probs=168.8

Q ss_pred             HHHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc----hhHHHHHHH-hhCCCCCcccceeeeeeCCC
Q 046594           56 LAILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGL  130 (304)
Q Consensus        56 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~  130 (304)
                      -.+.++|++.+.||+|+||.||++.++   .+++.||+|++.....    ...+.+|+. +++++||||+++++++...+
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~---~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   94 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDR---ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS   94 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEc---CCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC
Confidence            345689999999999999999999875   3578999999865432    226777777 99999999999999998874


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC---CCeeEcccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL---CNAKLAGFG  207 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~---~~~kl~Dfg  207 (304)
                       .+++|+||+++++|.+.+.... .+++..++.++.|++.||+|||..   +++||||||+||+++.+   +.+||+|||
T Consensus        95 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg  169 (287)
T 2wei_A           95 -SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG  169 (287)
T ss_dssp             -EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred             -eEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence             4599999999999999887766 799999999999999999999765   89999999999999754   479999999


Q ss_pred             cccccCCCCC-Cccccc---------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchH
Q 046594          208 AANYCSGGSN-RRNCEK---------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKIT  255 (304)
Q Consensus       208 la~~~~~~~~-~~~~~~---------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~  255 (304)
                      ++........ ....++         .+.++  +||||              |....      .+....... .......
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~  248 (287)
T 2wei_A          170 LSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF-DLPQWRT  248 (287)
T ss_dssp             GGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-CSGGGTT
T ss_pred             cceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-Cchhhhh
Confidence            9987655433 111111         12233  89999              11111      111111100 1111134


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          256 SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       256 ~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+..+.+++.+||.     .||++|||+.+++++
T Consensus       249 ~~~~~~~li~~~l~-----~dp~~Rps~~ell~h  277 (287)
T 2wei_A          249 ISDDAKDLIRKMLT-----FHPSLRITATQCLEH  277 (287)
T ss_dssp             SCHHHHHHHHHHTC-----SSGGGSCCHHHHHHS
T ss_pred             cCHHHHHHHHHHcc-----cChhhCcCHHHHhcC
Confidence            56789999999999     999999999999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=6.2e-34  Score=254.99  Aligned_cols=216  Identities=14%  Similarity=0.140  Sum_probs=165.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-------------------hHHHHHHH-hhCCCCCcc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-------------------TKLEEEIL-LKSSSHLNI  119 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-------------------~~~~~e~~-l~~l~h~ni  119 (304)
                      .+|++.+.||+|+||.||++.+     +++.||+|.+......                   ..+.+|+. +++++||||
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-----DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-----TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-----CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            5899999999999999999987     5799999998754321                   56777777 999999999


Q ss_pred             cceeeeeeCCCCceEEEEeecCCCChhhH------hhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCC
Q 046594          120 VTLLGYPQDGLQRRCLVFEFMQRGSLRWN------LREK-GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN  192 (304)
Q Consensus       120 v~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~-~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~N  192 (304)
                      +++++++.+.+ .+++||||+++|+|.++      +... ...+++..++.++.|++.||+|||+  +.|++||||||+|
T Consensus       106 ~~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~N  182 (348)
T 2pml_X          106 LTCEGIITNYD-EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSN  182 (348)
T ss_dssp             CCCSEEEESSS-EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGG
T ss_pred             ceEEEEEeeCC-eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHh
Confidence            99999998874 55999999999999998      6553 3389999999999999999999976  1489999999999


Q ss_pred             eeeCCCCCeeEcccccccccCCCCCCccccc----------Cc-cc---cccccc--------------CCCCc---cee
Q 046594          193 ILLDELCNAKLAGFGAANYCSGGSNRRNCEK----------TS-EM---AEDIND--------------FVGGQ---ECL  241 (304)
Q Consensus       193 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~----------~~-~~---s~DV~S--------------~~~~~---~~~  241 (304)
                      ||++.++.+||+|||++............++          .. .+   .+||||              |....   +..
T Consensus       183 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  262 (348)
T 2pml_X          183 ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF  262 (348)
T ss_dssp             EEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred             EEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence            9999999999999999987644322111111          11 22   389999              21111   111


Q ss_pred             ccccCCCCCCcc-------------------hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 DQRLYIPNEKFK-------------------ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 ~~~~~~~~~~~~-------------------~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .... .....++                   ...+..+.+++.+||+     .||.+|||+.|+++|
T Consensus       263 ~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~-----~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          263 NNIR-TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLR-----KNPAERITSEDALKH  323 (348)
T ss_dssp             HHHT-SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCC-----SSGGGSCCHHHHHTS
T ss_pred             HHHh-ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHcc-----CChhhCCCHHHHhcC
Confidence            0000 0001111                   4456889999999999     999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.1e-33  Score=254.27  Aligned_cols=216  Identities=19%  Similarity=0.223  Sum_probs=156.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~---  130 (304)
                      .++|++.+.||+|+||.||++.+.   .+++.||||++.......    .+.+|+. ++.++||||+++++++...+   
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDA---ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT
T ss_pred             hhheeEeeeeEecCCEEEEEEEEC---CCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc
Confidence            368999999999999999999875   357899999997543221    5667777 99999999999999987654   


Q ss_pred             --CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          131 --QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       131 --~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                        ..+++||||+++ +|.+.+..   .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       101 ~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  173 (371)
T 2xrw_A          101 EFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  173 (371)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             cccceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence              256999999975 88888863   589999999999999999999765   899999999999999999999999999


Q ss_pred             ccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCcc------eec-------------
Q 046594          209 ANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQE------CLD-------------  242 (304)
Q Consensus       209 a~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~~------~~~-------------  242 (304)
                      ++....... ....++          ...++  +||||              |.....      ++.             
T Consensus       174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  253 (371)
T 2xrw_A          174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL  253 (371)
T ss_dssp             ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred             ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence            987654322 222222          22223  99999              222110      000             


Q ss_pred             -----------ccc------------CC-CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 -----------QRL------------YI-PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 -----------~~~------------~~-~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                 +..            .. .....+...+..+.+|+.+||.     .||++|||+.|+++|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~-----~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV-----IDASKRISVDEALQH  319 (371)
T ss_dssp             CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC-----SSGGGSCCHHHHHHS
T ss_pred             hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCc-----CChhhCCCHHHHhCC
Confidence                       000            00 0000112336789999999999     999999999999985

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.6e-33  Score=246.84  Aligned_cols=218  Identities=19%  Similarity=0.174  Sum_probs=168.1

Q ss_pred             HHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----------hhHHHHHHH-hhCCC-CCcccceee
Q 046594           58 ILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----------QTKLEEEIL-LKSSS-HLNIVTLLG  124 (304)
Q Consensus        58 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~e~~-l~~l~-h~niv~~~~  124 (304)
                      +..+|++.+.||+|+||.||++.++   .+++.||||++.....           ...+.+|+. ++++. ||||+++++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~   91 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHK---PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD   91 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEc---CcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence            3578999999999999999999876   3578999999975431           114556666 88885 999999999


Q ss_pred             eeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          125 YPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       125 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      ++... ...++||||+++++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+
T Consensus        92 ~~~~~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~  166 (298)
T 1phk_A           92 TYETN-TFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLT  166 (298)
T ss_dssp             EEECS-SEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred             eeccC-CeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEe
Confidence            99877 45599999999999999998765 799999999999999999999765   89999999999999999999999


Q ss_pred             ccccccccCCCCC-Cccccc----------------Ccccc--ccccc--------------CCCCc------ceecccc
Q 046594          205 GFGAANYCSGGSN-RRNCEK----------------TSEMA--EDIND--------------FVGGQ------ECLDQRL  245 (304)
Q Consensus       205 Dfgla~~~~~~~~-~~~~~~----------------~~~~s--~DV~S--------------~~~~~------~~~~~~~  245 (304)
                      |||++........ ....++                ...++  +||||              +....      .+.....
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  246 (298)
T 1phk_A          167 DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY  246 (298)
T ss_dssp             CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             cccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc
Confidence            9999987654433 212222                11223  89999              11111      1111111


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          246 YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       246 ~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .. ........+..+.+++.+||+     .||++|||+.++++|
T Consensus       247 ~~-~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~ll~h  284 (298)
T 1phk_A          247 QF-GSPEWDDYSDTVKDLVSRFLV-----VQPQKRYTAEEALAH  284 (298)
T ss_dssp             CC-CTTTGGGSCHHHHHHHHHHCC-----SSGGGSCCHHHHTTS
T ss_pred             cc-CcccccccCHHHHHHHHHHcc-----CCcccCCCHHHHHhC
Confidence            00 112224567889999999999     999999999999874

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=8.7e-34  Score=267.60  Aligned_cols=217  Identities=15%  Similarity=0.098  Sum_probs=168.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.++   .+|+.||+|++......     ..+..|.. +++++||||+++++++... ..+
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~---~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~-~~l  260 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMK---ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK-TDL  260 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-SEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEC---CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC-CEE
Confidence            46788899999999999999876   35799999999754322     25566777 9999999999999999887 455


Q ss_pred             EEEEeecCCCChhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      |+||||+++|+|.+++....   ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.+|.+||+|||+++
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~  337 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV  337 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceee
Confidence            99999999999999987653   2699999999999999999999765   89999999999999999999999999998


Q ss_pred             ccCCCCC--CcccccCcc----------cc--ccccc--------------CCCCc------ceeccccCCCCCCcchHH
Q 046594          211 YCSGGSN--RRNCEKTSE----------MA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       211 ~~~~~~~--~~~~~~~~~----------~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~  256 (304)
                      .......  ...+++..+          ++  +||||              |....      ++....+ .....++...
T Consensus       338 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~-~~~~~~p~~~  416 (543)
T 3c4z_A          338 ELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL-EQAVTYPDKF  416 (543)
T ss_dssp             ECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH-HCCCCCCTTS
T ss_pred             eccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh-hcccCCCccc
Confidence            7755433  222444222          22  89999              22211      1111111 0123456667


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCH-----HHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKI-----VDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~-----~~vl~~  289 (304)
                      +..+.+++.+||.     .||.+||++     .++++|
T Consensus       417 s~~~~~li~~lL~-----~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          417 SPASKDFCEALLQ-----KDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             CHHHHHHHHHHSC-----SSGGGSCCCBTTBSHHHHTS
T ss_pred             CHHHHHHHHHhcc-----CCHhHCCCCcccCHHHHHcC
Confidence            7899999999999     999999965     677653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.8e-34  Score=251.80  Aligned_cols=216  Identities=17%  Similarity=0.167  Sum_probs=162.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCC-CCCcccceeeeeeCC-----CC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSS-SHLNIVTLLGYPQDG-----LQ  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l-~h~niv~~~~~~~~~-----~~  131 (304)
                      .+|++.+.||+|+||.||++.+.   .+++.||||++....... .+.+|+. ++++ +||||+++++++...     ..
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           24 GIFELVELVGNGTYGQVYKGRHV---KTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             CcEEEEEEeccCCCEEEEEEEEC---CCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            58999999999999999999875   357899999997654333 6777777 8888 899999999998763     34


Q ss_pred             ceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      .+++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++.
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  177 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA  177 (326)
T ss_dssp             EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred             eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence            5699999999999999998753 3799999999999999999999765   89999999999999999999999999998


Q ss_pred             ccCCCCC--Cccccc---------------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCC
Q 046594          211 YCSGGSN--RRNCEK---------------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEK  251 (304)
Q Consensus       211 ~~~~~~~--~~~~~~---------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~  251 (304)
                      .......  ....++               ...++  +||||              |....      .+.....   ...
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~  254 (326)
T 2x7f_A          178 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA---PRL  254 (326)
T ss_dssp             -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCC
T ss_pred             ecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc---ccC
Confidence            7643321  111111               11222  89999              11111      0000111   111


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+...+..+.+++.+||.     .||.+|||+.++++|
T Consensus       255 ~~~~~~~~l~~li~~~l~-----~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          255 KSKKWSKKFQSFIESCLV-----KNHSQRPATEQLMKH  287 (326)
T ss_dssp             SCSCSCHHHHHHHHHHCC-----SSGGGSCCHHHHHTS
T ss_pred             CccccCHHHHHHHHHHhc-----cChhhCCCHHHHhhC
Confidence            233456789999999999     999999999999985

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1e-33  Score=257.41  Aligned_cols=217  Identities=17%  Similarity=0.157  Sum_probs=159.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCC-------
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGL-------  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~-------  130 (304)
                      ..+|++.+.||+|+||.||++.+.   .+|+.||||++.....  ...+|+. ++.++||||+++++++...+       
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~~--~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~   80 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDI---ESGKRFALKKVLQDPR--YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP   80 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEET---TTCCEEEEEEEECCTT--SCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred             cceEEEEEEEEeccCEEEEEEEEC---CCCCEEEEEEEecCcc--hHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence            468999999999999999999876   4579999999865432  2335666 99999999999999985432       


Q ss_pred             ------------------------------CceEEEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046594          131 ------------------------------QRRCLVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCM  177 (304)
Q Consensus       131 ------------------------------~~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~  177 (304)
                                                    ..+++||||+++ +|.+.+..   .+..+++..+..++.|++.||+|||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  159 (383)
T 3eb0_A           81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS  159 (383)
T ss_dssp             -----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                                          236899999985 88877763   23379999999999999999999965


Q ss_pred             cCCCCeeecCCCCCCeeeC-CCCCeeEcccccccccCCCCC-Cccccc-----------Ccccc--ccccc---------
Q 046594          178 YSKPPIYHGNITSDNILLD-ELCNAKLAGFGAANYCSGGSN-RRNCEK-----------TSEMA--EDIND---------  233 (304)
Q Consensus       178 ~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfgla~~~~~~~~-~~~~~~-----------~~~~s--~DV~S---------  233 (304)
                         .||+||||||+|||++ .++.+||+|||+++....... ....++           ...++  +||||         
T Consensus       160 ---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  236 (383)
T 3eb0_A          160 ---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI  236 (383)
T ss_dssp             ---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             ---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence               4899999999999998 688999999999987654433 222222           12233  89999         


Q ss_pred             -----CCCCc------cee--------------cccc---CCC-------CCCcchHHHHHHHHHHHHhccccCCCCCCC
Q 046594          234 -----FVGGQ------ECL--------------DQRL---YIP-------NEKFKITSLAKLGDIEKWCISCCSNIEGNE  278 (304)
Q Consensus       234 -----~~~~~------~~~--------------~~~~---~~~-------~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~  278 (304)
                           |....      .++              ++..   ..+       ...++...+..+.+|+.+||.     .||.
T Consensus       237 ~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~  311 (383)
T 3eb0_A          237 LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR-----YEPD  311 (383)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC-----SSGG
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHcc-----CChh
Confidence                 22211      000              0000   000       011334456779999999999     9999


Q ss_pred             CCCCHHHHHHH
Q 046594          279 NHPKIVDVLSG  289 (304)
Q Consensus       279 ~Rps~~~vl~~  289 (304)
                      +|||+.|+++|
T Consensus       312 ~R~t~~e~l~h  322 (383)
T 3eb0_A          312 LRINPYEAMAH  322 (383)
T ss_dssp             GSCCHHHHHTS
T ss_pred             hCCCHHHHhcC
Confidence            99999999964

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=5.9e-34  Score=252.80  Aligned_cols=213  Identities=17%  Similarity=0.189  Sum_probs=166.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--------hHHHHHHH-hhCCC--CCcccceeeeee
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--------TKLEEEIL-LKSSS--HLNIVTLLGYPQ  127 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~e~~-l~~l~--h~niv~~~~~~~  127 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||||.+......        ..+..|+. +++++  |+||+++++++.
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRV---SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEET---TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             cCceEEEEEEeeCCCeEEEEEEEC---CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            568999999999999999999875   45799999999765321        23445555 77775  599999999998


Q ss_pred             CCCCceEEEEeecCC-CChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCeeEcc
Q 046594          128 DGLQRRCLVFEFMQR-GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAKLAG  205 (304)
Q Consensus       128 ~~~~~~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~kl~D  205 (304)
                      ..+. .++|+|++.+ ++|.+++.... .+++..++.++.|++.||+|||+.   +|+||||||+|||++ .++.+||+|
T Consensus       119 ~~~~-~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D  193 (320)
T 3a99_A          119 RPDS-FVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID  193 (320)
T ss_dssp             CSSE-EEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred             cCCc-EEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence            8744 4999999976 89999998766 799999999999999999999764   899999999999999 788999999


Q ss_pred             cccccccCCCCCCccccc-----------Ccccc--ccccc--------------CCCCcceeccccCCCCCCcchHHHH
Q 046594          206 FGAANYCSGGSNRRNCEK-----------TSEMA--EDIND--------------FVGGQECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       206 fgla~~~~~~~~~~~~~~-----------~~~~s--~DV~S--------------~~~~~~~~~~~~~~~~~~~~~~~~~  258 (304)
                      ||+++...........++           ....+  +||||              |...........     .++...+.
T Consensus       194 fg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~-----~~~~~~~~  268 (320)
T 3a99_A          194 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV-----FFRQRVSS  268 (320)
T ss_dssp             CTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCC-----CCSSCCCH
T ss_pred             CccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccc-----cccccCCH
Confidence            999987765433222222           12222  79999              222222222222     23445567


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+.+++.+||+     .||++|||+.+++++
T Consensus       269 ~~~~li~~~l~-----~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          269 ECQHLIRWCLA-----LRPSDRPTFEEIQNH  294 (320)
T ss_dssp             HHHHHHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHcc-----CChhhCcCHHHHhcC
Confidence            89999999999     999999999999985

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.8e-33  Score=251.41  Aligned_cols=218  Identities=18%  Similarity=0.184  Sum_probs=156.3

Q ss_pred             HHhhcccc-ccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeC---CCCce
Q 046594           59 LKRRRMLK-SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQD---GLQRR  133 (304)
Q Consensus        59 ~~~~~~~~-~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~---~~~~~  133 (304)
                      ..+|++.+ .||+|+||.||++.++   .+++.||||++....  ...++... ++.++||||+++++++..   ++..+
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHR---RTGQKCALKLLYDSP--KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEESSH--HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEEC---CCCCEEEEEEecCcH--HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            35899965 5999999999999886   457999999996532  22333334 777899999999999865   23446


Q ss_pred             EEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEcccccc
Q 046594          134 CLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGAA  209 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfgla  209 (304)
                      ++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.   +++||||||+|||++.   ++.+||+|||++
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~  178 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA  178 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence            999999999999999987653 799999999999999999999765   8999999999999986   455999999999


Q ss_pred             cccCCCCCCccccc----------Ccccc--ccccc-----------CCCCc----cee----ccccCCC----CCCcch
Q 046594          210 NYCSGGSNRRNCEK----------TSEMA--EDIND-----------FVGGQ----ECL----DQRLYIP----NEKFKI  254 (304)
Q Consensus       210 ~~~~~~~~~~~~~~----------~~~~s--~DV~S-----------~~~~~----~~~----~~~~~~~----~~~~~~  254 (304)
                      ............++          ...++  +||||           ..+..    ...    ...+...    ......
T Consensus       179 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (336)
T 3fhr_A          179 KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS  258 (336)
T ss_dssp             EEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTST
T ss_pred             eeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhc
Confidence            87654333222222          12222  89999           11111    000    0000000    111123


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..+..+.+++.+||+     .||++|||+.|+++|
T Consensus       259 ~~~~~~~~li~~~L~-----~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          259 EVSEDAKQLIRLLLK-----TDPTERLTITQFMNH  288 (336)
T ss_dssp             TCCHHHHHHHHHHSC-----SSGGGSCCHHHHHHS
T ss_pred             cCCHHHHHHHHHHCC-----CChhHCcCHHHHhcC
Confidence            557889999999999     999999999999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=3.3e-33  Score=252.27  Aligned_cols=216  Identities=20%  Similarity=0.230  Sum_probs=163.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCC----C
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGL----Q  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~----~  131 (304)
                      .+|++.+.||+|+||.||++.+.   .++..||||++.......   .+.+|+. +++++||||+++++++....    .
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDN---LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             ccEEEEEEeecCCCeEEEEEEEC---CCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            58999999999999999999875   357899999997544332   6667777 99999999999999986553    3


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      .+++||||+++ +|.+++...  .+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||++..
T Consensus       104 ~~~iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          104 DVYIVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             CEEEEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            46999999975 999998765  599999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC-----Cccccc-----------Ccccc--ccccc--------------CCCCc--ceecc--------------
Q 046594          212 CSGGSN-----RRNCEK-----------TSEMA--EDIND--------------FVGGQ--ECLDQ--------------  243 (304)
Q Consensus       212 ~~~~~~-----~~~~~~-----------~~~~s--~DV~S--------------~~~~~--~~~~~--------------  243 (304)
                      ......     ....++           ...++  +||||              |....  +.+..              
T Consensus       178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  257 (364)
T 3qyz_A          178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN  257 (364)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHH
T ss_pred             cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            643321     111222           11123  89999              22111  00000              


Q ss_pred             ------------ccC----CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          244 ------------RLY----IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       244 ------------~~~----~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                  .+.    .+........+..+.+++.+||+     .||++|||+.|+++|
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLT-----FNPHKRIEVEQALAH  314 (364)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcC-----CChhhCCCHHHHhcC
Confidence                        000    00001112345778999999999     999999999999975

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=6.8e-34  Score=251.64  Aligned_cols=220  Identities=15%  Similarity=0.171  Sum_probs=161.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++.+.||+|+||.||++.+.      ..+|+|++.......    .+.+|+. +++++||||+++++++...+. ++
T Consensus        33 ~~~~~~~~lg~G~~g~V~~~~~~------~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~  105 (319)
T 2y4i_B           33 EQLEIGELIGKGRFGQVYHGRWH------GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH-LA  105 (319)
T ss_dssp             SCEECCCBCCCSSSSEEEEEEES------SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC-EE
T ss_pred             HHeEEeeEeccCCceEEEEEEEc------CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc-eE
Confidence            57999999999999999998764      358999987543222    5667777 999999999999999998754 59


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++++|.+++...+..+++..++.++.|++.||+|||+.   +++||||||+|||++ ++.+||+|||++.....
T Consensus       106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~  181 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV  181 (319)
T ss_dssp             EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred             EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence            99999999999999988766799999999999999999999765   899999999999998 67999999999875432


Q ss_pred             CCC-------Cccccc-------------------Ccccc--ccccc--------------CCCCc--cee---ccccCC
Q 046594          215 GSN-------RRNCEK-------------------TSEMA--EDIND--------------FVGGQ--ECL---DQRLYI  247 (304)
Q Consensus       215 ~~~-------~~~~~~-------------------~~~~s--~DV~S--------------~~~~~--~~~---~~~~~~  247 (304)
                      ...       ....++                   ...++  +||||              |....  ...   ..... 
T Consensus       182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-  260 (319)
T 2y4i_B          182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK-  260 (319)
T ss_dssp             ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCC-
T ss_pred             ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCC-
Confidence            111       111111                   01233  89999              11111  110   01110 


Q ss_pred             CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          248 PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       248 ~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                       ....+...+..+.+++.+||.     .||++|||+.++++.|+.+.+..
T Consensus       261 -~~~~~~~~~~~l~~li~~~l~-----~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          261 -PNLSQIGMGKEISDILLFCWA-----FEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             -CCCCCSSCCTTHHHHHHHHHC-----SSTTTSCCHHHHHHHHTTC----
T ss_pred             -CCCCcCCCCHHHHHHHHHHhc-----CChhhCcCHHHHHHHHHHHHHhh
Confidence             111122345678999999999     99999999999999999887654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=2.4e-33  Score=252.66  Aligned_cols=220  Identities=16%  Similarity=0.104  Sum_probs=159.5

Q ss_pred             HHHHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-------------hHHHHHHH-hhCCCCCcccce
Q 046594           57 AILKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-------------TKLEEEIL-LKSSSHLNIVTL  122 (304)
Q Consensus        57 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~e~~-l~~l~h~niv~~  122 (304)
                      .+..+|++.+.||+|+||.||++.+.    +|..||||++......             ..+.+|+. +++++||||+++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   94 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDS----EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGL   94 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECT----TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             HhccceEEeEEeccCCCEEEEEEECC----CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccce
Confidence            34578999999999999999998764    4799999998653221             25667777 999999999999


Q ss_pred             eeeeeCCC----CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC
Q 046594          123 LGYPQDGL----QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL  198 (304)
Q Consensus       123 ~~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~  198 (304)
                      ++++...+    ..+++||||++ |+|.+.+......+++..+..++.|++.||+|||+.   +|+||||||+|||++.+
T Consensus        95 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~  170 (362)
T 3pg1_A           95 RDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADN  170 (362)
T ss_dssp             SEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred             eeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCC
Confidence            99985432    35699999998 599988887766899999999999999999999775   89999999999999999


Q ss_pred             CCeeEcccccccccCCCCC-Cccccc----------C-cccc--ccccc--------------CCCCc------cee---
Q 046594          199 CNAKLAGFGAANYCSGGSN-RRNCEK----------T-SEMA--EDIND--------------FVGGQ------ECL---  241 (304)
Q Consensus       199 ~~~kl~Dfgla~~~~~~~~-~~~~~~----------~-~~~s--~DV~S--------------~~~~~------~~~---  241 (304)
                      +.+||+|||++........ ....++          . ..++  +||||              |....      .+.   
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  250 (362)
T 3pg1_A          171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVV  250 (362)
T ss_dssp             CCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence            9999999999976544332 111121          1 2333  89999              21111      000   


Q ss_pred             --------------------ccccCC-C---CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 --------------------DQRLYI-P---NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 --------------------~~~~~~-~---~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                          ...... +   ....+...+..+.+++.+||+     .||++|||+.|+++|
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLE-----FNPQRRISTEQALRH  317 (362)
T ss_dssp             CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhc-----CChhhCCCHHHHHcC
Confidence                                000000 0   001122345778999999999     999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=7.9e-33  Score=245.52  Aligned_cols=220  Identities=21%  Similarity=0.201  Sum_probs=161.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhC---CCCCcccceeeeeeC--
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKS---SSHLNIVTLLGYPQD--  128 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~---l~h~niv~~~~~~~~--  128 (304)
                      ..+|++.+.||+|+||.||++.+..  .+++.||+|++.......    .+.+|+. ++.   ++||||+++++++..  
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLK--NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT--TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecC--CCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            3689999999999999999998742  357899999987543221    3444444 444   489999999999862  


Q ss_pred             --CCCceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          129 --GLQRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       129 --~~~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                        ....+++||||++ |+|.+++..... .+++..++.++.|++.||+|||+.   |++||||||+|||++.++.+||+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence              3355699999997 599999987643 599999999999999999999765   899999999999999999999999


Q ss_pred             cccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceec-------cc-
Q 046594          206 FGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLD-------QR-  244 (304)
Q Consensus       206 fgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~-------~~-  244 (304)
                      ||++........ ....++          ...++  +||||              |....      .+++       .. 
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  243 (326)
T 1blx_A          164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  243 (326)
T ss_dssp             CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence            999987653322 111222          22233  89999              21111      0000       00 


Q ss_pred             ----------c----CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 ----------L----YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 ----------~----~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                +    ..+...+....+..+.+++.+||+     .||++|||+.++++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT-----FNPAKRISAYSALSH  297 (326)
T ss_dssp             CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSC-----SSTTTSCCHHHHHTS
T ss_pred             ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcC-----CCcccCCCHHHHhcC
Confidence                      0    000012234456789999999999     999999999999975

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=5.2e-33  Score=256.45  Aligned_cols=148  Identities=22%  Similarity=0.234  Sum_probs=123.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCC------CCCcccceeeeeeCCCC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSS------SHLNIVTLLGYPQDGLQ  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l------~h~niv~~~~~~~~~~~  131 (304)
                      .||++.+.||+|+||.||++.+.   .+++.||||++....... .+.+|+. ++.+      +|+||+++++++... .
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~---~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~-~  172 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDH---KVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR-N  172 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEET---TTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET-T
T ss_pred             CcEEEEEEcccCccEEEEEEEEC---CCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC-C
Confidence            58999999999999999999876   357899999997654322 4444444 4444      688999999999887 4


Q ss_pred             ceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC--eeEccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN--AKLAGFGA  208 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~--~kl~Dfgl  208 (304)
                      .+++||||++ ++|.+++..... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.  +||+|||+
T Consensus       173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~  248 (429)
T 3kvw_A          173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS  248 (429)
T ss_dssp             EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence            5599999996 599999887653 699999999999999999999875   8999999999999999887  99999999


Q ss_pred             ccccCCC
Q 046594          209 ANYCSGG  215 (304)
Q Consensus       209 a~~~~~~  215 (304)
                      +......
T Consensus       249 a~~~~~~  255 (429)
T 3kvw_A          249 SCYEHQR  255 (429)
T ss_dssp             CEETTCC
T ss_pred             ceecCCc
Confidence            9766543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=9e-33  Score=244.18  Aligned_cols=219  Identities=20%  Similarity=0.204  Sum_probs=151.7

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||||++.......    .+.++.. ++.++||||+++++++...+ .+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-~~   99 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFR---KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT-DV   99 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEET---TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-EE
T ss_pred             hccccccceeeecCCeeEEEEEEe---cCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC-cE
Confidence            358999999999999999999876   357899999997654432    4445555 88889999999999998874 55


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+ ++.+..+.......+++..++.++.|++.||+|||+.+  |++||||||+|||++.++.+||+|||++....
T Consensus       100 ~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  176 (318)
T 2dyl_A          100 FIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLV  176 (318)
T ss_dssp             EEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             EEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence            9999999 55666666654558999999999999999999998632  79999999999999999999999999997664


Q ss_pred             CCCC-Cccccc---------------Ccccc--ccccc--------------CCCCc---ceeccccCCCCCCc--chHH
Q 046594          214 GGSN-RRNCEK---------------TSEMA--EDIND--------------FVGGQ---ECLDQRLYIPNEKF--KITS  256 (304)
Q Consensus       214 ~~~~-~~~~~~---------------~~~~s--~DV~S--------------~~~~~---~~~~~~~~~~~~~~--~~~~  256 (304)
                      .... ....++               ...++  +||||              |....   +.+...........  ....
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (318)
T 2dyl_A          177 DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF  256 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCC
T ss_pred             CCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCC
Confidence            4322 111111               11222  89999              21111   11111110001111  1235


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..+.+++.+||+     .||.+|||+.++++|
T Consensus       257 ~~~l~~li~~~l~-----~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          257 SGDFQSFVKDCLT-----KDHRKRPKYNKLLEH  284 (318)
T ss_dssp             CHHHHHHHHHHTC-----SCTTTSCCHHHHTTS
T ss_pred             CHHHHHHHHHHcc-----CChhHCcCHHHHhhC
Confidence            6789999999999     999999999999975

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=4.9e-33  Score=251.58  Aligned_cols=216  Identities=20%  Similarity=0.194  Sum_probs=146.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCC-----
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDG-----  129 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~-----  129 (304)
                      .+|++.+.||+|+||.||++.+.   .+|+.||||++......    ..+.+|+. ++.++||||+++++++...     
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~  105 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDT---KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE  105 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEET---TTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             CceEEeeEEeecCCeEEEEEEEC---CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence            58999999999999999999875   46799999998754322    25566777 9999999999999998654     


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ...+++++||+ +++|.+++...  .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||++
T Consensus       106 ~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          106 FNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             CCCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred             CCeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence            13459999999 67999988763  699999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc-------C-cccc--ccccc--------------CCCCcc------eec---------------
Q 046594          210 NYCSGGSN--RRNCEK-------T-SEMA--EDIND--------------FVGGQE------CLD---------------  242 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~-------~-~~~s--~DV~S--------------~~~~~~------~~~---------------  242 (304)
                      +.......  ..+..+       . ..++  +||||              |+....      ++.               
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~  259 (367)
T 2fst_X          180 RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS  259 (367)
T ss_dssp             -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred             ccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence            87654322  111111       1 2333  89999              222210      000               


Q ss_pred             -------ccc-CCCCCCc---chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 -------QRL-YIPNEKF---KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 -------~~~-~~~~~~~---~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                             ..+ ..+...+   ....+..+.+|+.+||.     .||.+|||+.++++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~-----~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV-----LDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCC-----CCcccCcCHHHHhcC
Confidence                   000 0000000   12235678999999999     999999999999986

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-32  Score=243.59  Aligned_cols=217  Identities=20%  Similarity=0.194  Sum_probs=156.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCC------
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDG------  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~------  129 (304)
                      ..+|++.+.||+|+||.||++.+.   .+++.||+|++.......  .+.+|+. +++++||||+++++++...      
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   86 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDN---DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD   86 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEET---TTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred             CCceeEEEEeccCCCeEEEEEEEC---CCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence            468999999999999999999876   357899999987654433  6677777 9999999999999987432      


Q ss_pred             -------CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCe
Q 046594          130 -------LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNA  201 (304)
Q Consensus       130 -------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~  201 (304)
                             ...+++||||++ |+|.+++...  ++++..++.++.|++.||+|||+.   +++||||||+|||++ .++.+
T Consensus        87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~  160 (320)
T 2i6l_A           87 DVGSLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL  160 (320)
T ss_dssp             ----CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred             ccccccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence                   245699999998 5999998753  699999999999999999999765   899999999999997 56799


Q ss_pred             eEcccccccccCCCCC-----Cccccc-----------Ccccc--ccccc--------------CCCCcc------eecc
Q 046594          202 KLAGFGAANYCSGGSN-----RRNCEK-----------TSEMA--EDIND--------------FVGGQE------CLDQ  243 (304)
Q Consensus       202 kl~Dfgla~~~~~~~~-----~~~~~~-----------~~~~s--~DV~S--------------~~~~~~------~~~~  243 (304)
                      ||+|||+++.......     ....++           ...++  +||||              |.....      +...
T Consensus       161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  240 (320)
T 2i6l_A          161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES  240 (320)
T ss_dssp             EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            9999999987643211     111111           12333  89999              221110      0000


Q ss_pred             ----------------------ccCCCC---CCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          244 ----------------------RLYIPN---EKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       244 ----------------------~~~~~~---~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                            ....+.   .......+..+.+++.+||+     .||++|||+.++++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILT-----FSPMDRLTAEEALSH  306 (320)
T ss_dssp             SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSC-----SSGGGSCCHHHHHTS
T ss_pred             cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcC-----CCccccCCHHHHhCC
Confidence                                  000000   01112356789999999999     999999999999975

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.98  E-value=1.8e-32  Score=250.87  Aligned_cols=151  Identities=17%  Similarity=0.129  Sum_probs=116.9

Q ss_pred             HHhhcc-ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeC-CCCceEE
Q 046594           59 LKRRRM-LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQD-GLQRRCL  135 (304)
Q Consensus        59 ~~~~~~-~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~-~~~~~~l  135 (304)
                      ..+|++ .+.||+|+||.||++.++.. .+++.||||++........+.+|+. +++++||||+++++++.. .+..+++
T Consensus        19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           19 EDLFEYEGCKVGRGTYGHVYKAKRKDG-KDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHHEECSSCCCC-----EEEEEEESSS-SCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhhcCcEeeecCCeEEEEEEEccC-CCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            456776 45799999999999986533 3568999999987665556667777 999999999999999864 3356699


Q ss_pred             EEeecCCCChhhHhhhcC--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee----CCCCCeeE
Q 046594          136 VFEFMQRGSLRWNLREKG--------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL----DELCNAKL  203 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~--------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill----~~~~~~kl  203 (304)
                      ||||+++ +|.+++....        ..+++..++.++.|++.||+|||+.   +|+||||||+|||+    +.++.+||
T Consensus        98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence            9999975 8888776321        1599999999999999999999765   89999999999999    67789999


Q ss_pred             cccccccccCC
Q 046594          204 AGFGAANYCSG  214 (304)
Q Consensus       204 ~Dfgla~~~~~  214 (304)
                      +|||+++....
T Consensus       174 ~Dfg~a~~~~~  184 (405)
T 3rgf_A          174 ADMGFARLFNS  184 (405)
T ss_dssp             CCTTCCC----
T ss_pred             EECCCceecCC
Confidence            99999987654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.98  E-value=5.7e-33  Score=255.52  Aligned_cols=215  Identities=17%  Similarity=0.146  Sum_probs=157.5

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCC-----CCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDG-----LQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~-----~~~~~  134 (304)
                      +|++.+.||+|+||.||++.++   .+++.||||++....  ....+|+. ++.++||||+++++++...     ...++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~---~~~~~vaiK~~~~~~--~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDK--RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEECCT--TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEEC---CCCcEEEEEEecccc--hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            6899999999999999999886   357999999986532  22335666 9999999999999988542     12357


Q ss_pred             EEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-CCeeEccccccc
Q 046594          135 LVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-CNAKLAGFGAAN  210 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfgla~  210 (304)
                      +||||+++ +|.+.+..   ....+++..++.++.|++.||+|||+.   +|+||||||+|||++.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999986 67666543   234799999999999999999999654   89999999999999965 578999999998


Q ss_pred             ccCCCCC-Cccccc-----------Ccccc--ccccc--------------CCCCc------cee--------------c
Q 046594          211 YCSGGSN-RRNCEK-----------TSEMA--EDIND--------------FVGGQ------ECL--------------D  242 (304)
Q Consensus       211 ~~~~~~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~~--------------~  242 (304)
                      ....... ....++           ...++  +||||              |....      +++              .
T Consensus       206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~  285 (420)
T 1j1b_A          206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN  285 (420)
T ss_dssp             ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred             hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence            7654332 222222           11233  89999              32221      000              0


Q ss_pred             ccc---CCC--C-C----CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 QRL---YIP--N-E----KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 ~~~---~~~--~-~----~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..   ..+  . .    .++...+..+.+|+.+||.     .||.+|||+.|+++|
T Consensus       286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~-----~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE-----YTPTARLTPLEACAH  337 (420)
T ss_dssp             SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhcc-----CChhHCCCHHHHhCC
Confidence            000   000  0 0    0223446789999999999     999999999999975

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.98  E-value=1.4e-32  Score=248.93  Aligned_cols=215  Identities=20%  Similarity=0.196  Sum_probs=158.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCC---
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ---  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~---  131 (304)
                      ++|++.+.||+|+||.||++.++   .+|+.||||++.......    .+.+|+. ++.++||||+++++++...+.   
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDK---RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred             ccEEEEeEEecCCCeEEEEEEEC---CCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence            58999999999999999999876   457999999997643322    5667777 999999999999999977643   


Q ss_pred             --ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          132 --RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       132 --~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                        .+++||||++ ++|.+.+..   .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       119 ~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          119 FYDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             CCCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             ceeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence              2389999997 488888743   599999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc-------C-cccc--ccccc--------------CCCCc------ceec---------------
Q 046594          210 NYCSGGSN--RRNCEK-------T-SEMA--EDIND--------------FVGGQ------ECLD---------------  242 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~-------~-~~~s--~DV~S--------------~~~~~------~~~~---------------  242 (304)
                      +.......  ..+..+       . ..++  +||||              |....      .+..               
T Consensus       192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  271 (371)
T 4exu_A          192 RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND  271 (371)
T ss_dssp             --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSC
T ss_pred             cccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhh
Confidence            86654332  111111       1 2333  89999              22111      0000               


Q ss_pred             -------ccc-CCCCC---CcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 -------QRL-YIPNE---KFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 -------~~~-~~~~~---~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                             ..+ ..+..   ......+..+.+|+.+||+     .||++|||+.|+++|
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE-----LDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSC-----SCTTTSCCHHHHHTS
T ss_pred             hhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCC-----CChhhcCCHHHHhcC
Confidence                   000 00000   1112346789999999999     999999999999986

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.98  E-value=4.5e-33  Score=253.39  Aligned_cols=134  Identities=22%  Similarity=0.168  Sum_probs=108.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCC--------CCcccceeeeeeC-
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSS--------HLNIVTLLGYPQD-  128 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~--------h~niv~~~~~~~~-  128 (304)
                      .+|++.+.||+|+||.||++.+.   .+++.||||++....... .+.+|+. ++.++        |+||+++++++.. 
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDI---QGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             CeEEEEEEeeecCCeeEEEEEec---CCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            68999999999999999999875   457899999997653322 5566666 77774        8889999999872 


Q ss_pred             --CCCceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC
Q 046594          129 --GLQRRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC  199 (304)
Q Consensus       129 --~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~  199 (304)
                        .+..+++||||+ +++|.+.+.... ..+++..++.++.|++.||+|||+.+  ||+||||||+|||++.++
T Consensus       114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~  184 (397)
T 1wak_A          114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCH
T ss_pred             CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccc
Confidence              234569999999 456666665543 47999999999999999999997632  799999999999999775

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.98  E-value=1.8e-32  Score=243.96  Aligned_cols=219  Identities=18%  Similarity=0.178  Sum_probs=162.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCC------cccceeeeeeCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHL------NIVTLLGYPQDGL  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~------niv~~~~~~~~~~  130 (304)
                      ..+|++.+.||+|+||.||++.+..  .+++.||||+++...... .+..|+. ++.++|+      +++++++++...+
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHK--AGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT--TTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             cCceEEEEEEecCCCeEEEEEEecC--CCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            3589999999999999999987631  357899999997644322 5666666 7777655      4999999998874


Q ss_pred             CceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC------------
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE------------  197 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~------------  197 (304)
                       .+++||||+ +++|.+++...+. ++++..+..++.|++.||+|||+.   +|+||||||+|||++.            
T Consensus        91 -~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~  165 (339)
T 1z57_A           91 -HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK  165 (339)
T ss_dssp             -EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred             -cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence             559999999 7899999987653 689999999999999999999765   8999999999999987            


Q ss_pred             -------CCCeeEcccccccccCCCCC--Cccccc-------Ccccc--ccccc--------------CCCCcc-----e
Q 046594          198 -------LCNAKLAGFGAANYCSGGSN--RRNCEK-------TSEMA--EDIND--------------FVGGQE-----C  240 (304)
Q Consensus       198 -------~~~~kl~Dfgla~~~~~~~~--~~~~~~-------~~~~s--~DV~S--------------~~~~~~-----~  240 (304)
                             ++.+||+|||+++.......  ..+..+       ...++  +||||              |+....     .
T Consensus       166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  245 (339)
T 1z57_A          166 RDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM  245 (339)
T ss_dssp             CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred             cccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                   66899999999987654332  111111       22233  99999              221110     0


Q ss_pred             ecccc----------------------CCC------------------CCCcchHHHHHHHHHHHHhccccCCCCCCCCC
Q 046594          241 LDQRL----------------------YIP------------------NEKFKITSLAKLGDIEKWCISCCSNIEGNENH  280 (304)
Q Consensus       241 ~~~~~----------------------~~~------------------~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~R  280 (304)
                      +....                      .+.                  ....+...+..+.+++.+||+     .||.+|
T Consensus       246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~-----~dP~~R  320 (339)
T 1z57_A          246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE-----YDPAKR  320 (339)
T ss_dssp             HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC-----SSTTTS
T ss_pred             HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC-----cCcccc
Confidence            00000                      000                  001123456789999999999     999999


Q ss_pred             CCHHHHHHH
Q 046594          281 PKIVDVLSG  289 (304)
Q Consensus       281 ps~~~vl~~  289 (304)
                      ||+.|+++|
T Consensus       321 pt~~ell~h  329 (339)
T 1z57_A          321 ITLREALKH  329 (339)
T ss_dssp             CCHHHHTTS
T ss_pred             cCHHHHhcC
Confidence            999999876

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.98  E-value=1.6e-32  Score=246.37  Aligned_cols=147  Identities=19%  Similarity=0.259  Sum_probs=126.0

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCC----C
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDG----L  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~----~  130 (304)
                      ..+|++.+.||+|+||.||++.+.   .+|+.||||++.......   .+.+|+. ++.++||||+++++++...    .
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   86 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHK---PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF   86 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEEC---CCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence            358999999999999999999875   457899999997544332   5667777 9999999999999987654    2


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      ...++||||++ |+|.+++...  .+++..+..++.|++.||+|||+.   |++||||||+|||++.++.+||+|||++.
T Consensus        87 ~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           87 NEVYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR  160 (353)
T ss_dssp             CCEEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ceEEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence            45699999997 4999998874  699999999999999999999765   89999999999999999999999999998


Q ss_pred             ccCC
Q 046594          211 YCSG  214 (304)
Q Consensus       211 ~~~~  214 (304)
                      ....
T Consensus       161 ~~~~  164 (353)
T 2b9h_A          161 IIDE  164 (353)
T ss_dssp             ECC-
T ss_pred             cccc
Confidence            7653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.98  E-value=7.9e-33  Score=245.95  Aligned_cols=218  Identities=19%  Similarity=0.153  Sum_probs=157.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++.+.||+|+||.||++.++   .+++.||||++.......    .+.++.. ++.++||||+++++++...+ ..+
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~-~~~   97 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHK---PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG-DCW   97 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEET---TTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-EEE
T ss_pred             HHhhehheeccCCCEEEEEEEEc---CCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-ceE
Confidence            57999999999999999999875   357999999997654332    3444554 78889999999999998874 459


Q ss_pred             EEEeecCCCChhhHhhh----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          135 LVFEFMQRGSLRWNLRE----KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                      +||||+++ +|.+++..    ....+++..+..++.|++.||.|||+.  .+++||||||+|||++.++.+||+|||+++
T Consensus        98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A           98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            99999986 88887763    233799999999999999999999763  179999999999999999999999999998


Q ss_pred             ccCCCCC-Cccccc--------------Ccccc--ccccc--------------CCCCc---ceeccccCCC----CCCc
Q 046594          211 YCSGGSN-RRNCEK--------------TSEMA--EDIND--------------FVGGQ---ECLDQRLYIP----NEKF  252 (304)
Q Consensus       211 ~~~~~~~-~~~~~~--------------~~~~s--~DV~S--------------~~~~~---~~~~~~~~~~----~~~~  252 (304)
                      ....... ....++              ...++  +||||              |....   +.+.......    ....
T Consensus       175 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
T 3aln_A          175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE  254 (327)
T ss_dssp             C------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCS
T ss_pred             ecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcc
Confidence            7654332 111111              11123  89999              22211   1111111000    1112


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ....+..+.+++.+||+     .||++|||+.+++++
T Consensus       255 ~~~~~~~l~~li~~~l~-----~dp~~Rps~~ell~h  286 (327)
T 3aln_A          255 EREFSPSFINFVNLCLT-----KDESKRPKYKELLKH  286 (327)
T ss_dssp             SCCCCHHHHHHHHHHTC-----SSGGGSCCHHHHTTS
T ss_pred             cccCCHHHHHHHHHHhh-----CChhhCcCHHHHHhC
Confidence            23467889999999999     999999999999874

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.98  E-value=3.7e-32  Score=244.27  Aligned_cols=215  Identities=19%  Similarity=0.162  Sum_probs=160.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCC---
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ---  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~---  131 (304)
                      ++|++.+.||+|+||.||++.++   .+|+.||||++.......    .+.+|+. ++.++||||+++++++...+.   
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  100 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDK---RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  100 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             ceEEEeeeEecCCCeEEEEEEEC---CCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence            57999999999999999999875   457999999997643222    5667777 999999999999999877643   


Q ss_pred             --ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          132 --RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       132 --~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                        .+++||||++ |+|.+++..   .+++..+..++.|++.||+|||+.   |++||||||+|||++.++.+||+|||++
T Consensus       101 ~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A          101 FYDFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             CCCCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             ceeEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence              2499999997 499888754   599999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCC--Cccccc-------C-cccc--ccccc--------------CCCCc--c----ee----------------
Q 046594          210 NYCSGGSN--RRNCEK-------T-SEMA--EDIND--------------FVGGQ--E----CL----------------  241 (304)
Q Consensus       210 ~~~~~~~~--~~~~~~-------~-~~~s--~DV~S--------------~~~~~--~----~~----------------  241 (304)
                      +.......  ..+..+       . ..++  +||||              |....  +    +.                
T Consensus       174 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  253 (353)
T 3coi_A          174 RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND  253 (353)
T ss_dssp             TC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSC
T ss_pred             cCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence            87643322  111111       1 2233  89999              21111  0    00                


Q ss_pred             ----------ccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 ----------DQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 ----------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                ...............+..+.+++.+||+     .||++|||+.++++|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE-----LDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSC-----SCTTTSCCHHHHHTS
T ss_pred             HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcC-----CCcccCCCHHHHhcC
Confidence                      0000000012234557889999999999     999999999999975

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.98  E-value=4.8e-33  Score=248.43  Aligned_cols=211  Identities=15%  Similarity=0.097  Sum_probs=149.9

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----------hHHHHHHH-hhCCC---------CCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----------TKLEEEIL-LKSSS---------HLN  118 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~e~~-l~~l~---------h~n  118 (304)
                      ..+|++.+.||+|+||.||++.+     +|+.||||++......          ..+.+|+. ++.++         |||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~n   93 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-----DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEG   93 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-----TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCC
T ss_pred             cccchheeeecccCceEEEEEEe-----CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCc
Confidence            57899999999999999999986     3689999999865321          35556665 66665         555


Q ss_pred             ccce-----------------eeeeeC------------CCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHH
Q 046594          119 IVTL-----------------LGYPQD------------GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQID  169 (304)
Q Consensus       119 iv~~-----------------~~~~~~------------~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~  169 (304)
                      |+++                 ++++..            .+..+|+||||+++|++.+.+.+  ..+++..+..++.|++
T Consensus        94 iv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~  171 (336)
T 2vuw_A           94 FIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLT  171 (336)
T ss_dssp             BCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHH
T ss_pred             hhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHH
Confidence            5555                 444443            23566999999999977666644  2689999999999999


Q ss_pred             HHHHHHh-hcCCCCeeecCCCCCCeeeCCCC--------------------CeeEcccccccccCCCCCCccccc-----
Q 046594          170 SANQMVC-MYSKPPIYHGNITSDNILLDELC--------------------NAKLAGFGAANYCSGGSNRRNCEK-----  223 (304)
Q Consensus       170 ~~l~~Lh-~~~~~~ivH~dlkp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~-----  223 (304)
                      .||+||| +.   +|+||||||+|||++.++                    .+||+|||+|+.........+..+     
T Consensus       172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~  248 (336)
T 2vuw_A          172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDL  248 (336)
T ss_dssp             HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGG
T ss_pred             HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhh
Confidence            9999998 55   799999999999999887                    899999999987754332111111     


Q ss_pred             -Cc--ccccccccC------------CCCcc------eecc-----ccC-CCCCCcchHHHHHHHHHHHHhccccCCCCC
Q 046594          224 -TS--EMAEDINDF------------VGGQE------CLDQ-----RLY-IPNEKFKITSLAKLGDIEKWCISCCSNIEG  276 (304)
Q Consensus       224 -~~--~~s~DV~S~------------~~~~~------~~~~-----~~~-~~~~~~~~~~~~~l~~l~~~cl~~~~~~~d  276 (304)
                       .+  ...+||||.            .+...      ..+.     ... ......+...++.+.+|+.+||+     +|
T Consensus       249 ~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~-----~d  323 (336)
T 2vuw_A          249 FTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLN-----FS  323 (336)
T ss_dssp             GCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGG-----SS
T ss_pred             hcCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhc-----cC
Confidence             11  122899991            11101      0000     110 00122345678899999999999     87


Q ss_pred             CCCCCCHHHHH-HH
Q 046594          277 NENHPKIVDVL-SG  289 (304)
Q Consensus       277 p~~Rps~~~vl-~~  289 (304)
                           |+.|++ +|
T Consensus       324 -----sa~e~l~~H  332 (336)
T 2vuw_A          324 -----SATDLLCQH  332 (336)
T ss_dssp             -----SHHHHHHHC
T ss_pred             -----CHHHHHhcC
Confidence                 999998 64

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.98  E-value=1e-32  Score=251.76  Aligned_cols=215  Identities=17%  Similarity=0.144  Sum_probs=155.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCC-----ce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQ-----RR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~-----~~  133 (304)
                      .+|++.+.||+|+||.||++.+.    ++..+|+|++.....  ...+|+. ++.++||||+++++++...+.     .+
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~----~~~~~aikk~~~~~~--~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~  113 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLV----ESDEVAIKKVLQDKR--FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL  113 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEET----TTEEEEEEEEECCTT--SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEEC----CCCeEEEEEEecCcc--hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence            37999999999999999999875    235588888864322  2234566 999999999999999864422     26


Q ss_pred             EEEEeecCCCChhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCeeEcccccc
Q 046594          134 CLVFEFMQRGSLRWNLRE---KGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAKLAGFGAA  209 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfgla  209 (304)
                      ++||||+++ ++.+.+..   ....+++..+..++.|++.||+|||+.   ||+||||||+|||++ .++.+||+|||++
T Consensus       114 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          114 NLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA  189 (394)
T ss_dssp             EEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence            899999987 44443332   233799999999999999999999765   899999999999999 7999999999999


Q ss_pred             cccCCCCC-Cccccc-----------Ccccc--ccccc--------------CCCCc------cee--------------
Q 046594          210 NYCSGGSN-RRNCEK-----------TSEMA--EDIND--------------FVGGQ------ECL--------------  241 (304)
Q Consensus       210 ~~~~~~~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~------~~~--------------  241 (304)
                      +....... ....++           ...++  +||||              |....      .++              
T Consensus       190 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~  269 (394)
T 4e7w_A          190 KILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM  269 (394)
T ss_dssp             EECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             ccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence            87654433 222222           12233  89999              22221      000              


Q ss_pred             cc-----ccCC-C----CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          242 DQ-----RLYI-P----NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       242 ~~-----~~~~-~----~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ++     .+.. .    ...++...+..+.+|+.+||+     .||.+|||+.|+++|
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLE-----YTPSARLTAIEALCH  322 (394)
T ss_dssp             CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC-----SSGGGSCCHHHHHTS
T ss_pred             ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhC-----CChhhCCCHHHHhcC
Confidence            00     0000 0    001223356789999999999     999999999999986

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=5.2e-32  Score=263.34  Aligned_cols=219  Identities=17%  Similarity=0.158  Sum_probs=163.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCc---
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQR---  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~---  132 (304)
                      .+|++.+.||+|+||.||++.++..  +++.||||.+.......   .+..|+. +++++||||+++++++...+..   
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNV--NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGG--TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCC--CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            6899999999999999999987532  57899999987544332   6677777 9999999999999999876442   


Q ss_pred             -eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          133 -RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       133 -~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                       .|+||||+++++|.+++..   .+++..++.++.|++.||+|||+.   ||+||||||+|||++.+ .+||+|||+++.
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             eeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence             5999999999999988765   699999999999999999999765   89999999999999986 899999999987


Q ss_pred             cCCCCC-Cccccc--C----cccc--ccccc-----------CCCCcceeccccCCCCCCcchHHHHHHHHHHHHhcccc
Q 046594          212 CSGGSN-RRNCEK--T----SEMA--EDIND-----------FVGGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCC  271 (304)
Q Consensus       212 ~~~~~~-~~~~~~--~----~~~s--~DV~S-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~  271 (304)
                      ...... ..+.++  +    +..+  +||||           ++.........+  +........+..+.+++.+||+  
T Consensus       231 ~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~--  306 (681)
T 2pzi_A          231 INSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--PEDDPVLKTYDSYGRLLRRAID--  306 (681)
T ss_dssp             TTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--CTTCHHHHHCHHHHHHHHHHTC--
T ss_pred             cccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc--cccccccccCHHHHHHHhhhcc--
Confidence            755432 222111  1    1112  89999           121111111112  0111223345779999999999  


Q ss_pred             CCCCCCCCCCC-HHHHHHHHHHHH
Q 046594          272 SNIEGNENHPK-IVDVLSGLKQVK  294 (304)
Q Consensus       272 ~~~~dp~~Rps-~~~vl~~L~~~~  294 (304)
                         .||.+||+ +.++...|..+.
T Consensus       307 ---~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          307 ---PDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             ---SSGGGSCSSHHHHHHHHHHHH
T ss_pred             ---CChhhCCCHHHHHHHHHHHHH
Confidence               99999995 666667777664

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=3e-32  Score=240.74  Aligned_cols=211  Identities=19%  Similarity=0.200  Sum_probs=160.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCC--CCcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSS--HLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~--h~niv~~~~~~~~~~~~  132 (304)
                      ++|++.+.||+|+||.||++.+.    +++.||||++......    ..+.+|+. +++++  |+||+++++++...+ .
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~-~  102 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-Y  102 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS-E
T ss_pred             ceEEEEEEecCCCCEEEEEEEcC----CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC-E
Confidence            57999999999999999998774    4789999999754322    26677777 88886  599999999998874 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||| +.+++|.+++.... .+++..++.++.|++.||+|||+.   +++||||||+|||++. +.+||+|||++...
T Consensus       103 ~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~  176 (313)
T 3cek_A          103 IYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQM  176 (313)
T ss_dssp             EEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred             EEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccc
Confidence            599999 55779999998766 799999999999999999999765   8999999999999964 89999999999876


Q ss_pred             CCCCC----Cccccc---------C------------cccc--ccccc-----------CCCCc----------ceeccc
Q 046594          213 SGGSN----RRNCEK---------T------------SEMA--EDIND-----------FVGGQ----------ECLDQR  244 (304)
Q Consensus       213 ~~~~~----~~~~~~---------~------------~~~s--~DV~S-----------~~~~~----------~~~~~~  244 (304)
                      .....    ....++         .            ..++  +||||           ..+..          ...++.
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  256 (313)
T 3cek_A          177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN  256 (313)
T ss_dssp             -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT
T ss_pred             cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcc
Confidence            44321    111111         1            1233  89999           11111          122222


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          245 LYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       245 ~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .   ...++...+..+.+++.+||+     .||.+|||+.|++++
T Consensus       257 ~---~~~~~~~~~~~l~~li~~~l~-----~dp~~Rps~~ell~h  293 (313)
T 3cek_A          257 H---EIEFPDIPEKDLQDVLKCCLK-----RDPKQRISIPELLAH  293 (313)
T ss_dssp             S---CCCCCCCSCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             c---ccCCcccchHHHHHHHHHHcc-----CCcccCcCHHHHhcC
Confidence            2   234455556789999999999     999999999999986

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=5.7e-32  Score=245.78  Aligned_cols=151  Identities=23%  Similarity=0.218  Sum_probs=123.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCC-CC-----cccceeeeeeCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSS-HL-----NIVTLLGYPQDGL  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~-h~-----niv~~~~~~~~~~  130 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||||+++...... .+..|+. ++.++ |+     +|+++++++... 
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-  128 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDR---VEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR-  128 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET---TTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET-
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEc---CCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC-
Confidence            358999999999999999999875   357899999997543322 4445555 65553 44     599999999887 


Q ss_pred             CceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC--CCCCeeEcccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD--ELCNAKLAGFG  207 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~--~~~~~kl~Dfg  207 (304)
                      ..+++||||+++ +|.+++.... ..+++..+..++.|++.||+|||. |+.+|+||||||+|||++  .++.+||+|||
T Consensus       129 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG  206 (382)
T 2vx3_A          129 NHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFG  206 (382)
T ss_dssp             TEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred             CceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence            455999999965 9999998764 369999999999999999999986 466999999999999995  47789999999


Q ss_pred             cccccCCC
Q 046594          208 AANYCSGG  215 (304)
Q Consensus       208 la~~~~~~  215 (304)
                      +++.....
T Consensus       207 ~a~~~~~~  214 (382)
T 2vx3_A          207 SSCQLGQR  214 (382)
T ss_dssp             TCEETTCC
T ss_pred             Cceecccc
Confidence            99877543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=1.8e-32  Score=247.56  Aligned_cols=218  Identities=18%  Similarity=0.173  Sum_probs=162.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCC-----------CCcccceeeee
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSS-----------HLNIVTLLGYP  126 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~-----------h~niv~~~~~~  126 (304)
                      .+|++.+.||+|+||.||++.+.   .+++.||||++....... .+.+|+. +++++           ||||+++++++
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDM---VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEec---CCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            58999999999999999999875   457999999998544333 5566666 77665           89999999998


Q ss_pred             eCCC---CceEEEEeecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC------
Q 046594          127 QDGL---QRRCLVFEFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD------  196 (304)
Q Consensus       127 ~~~~---~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~------  196 (304)
                      ...+   ..++++|||+ +++|.+++..... .+++..+..++.|++.||+|||+.+  +|+||||||+|||++      
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred             hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence            7542   2569999999 7899999987543 6999999999999999999997632  799999999999994      


Q ss_pred             CCCCeeEcccccccccCCCCCCccccc----------Ccccc--ccccc--------------CCCCc------------
Q 046594          197 ELCNAKLAGFGAANYCSGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ------------  238 (304)
Q Consensus       197 ~~~~~kl~Dfgla~~~~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~------------  238 (304)
                      .++.+||+|||++........ ...++          ...++  +||||              |....            
T Consensus       173 ~~~~~kl~Dfg~a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  251 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDEHYT-NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  251 (373)
T ss_dssp             TEEEEEECCCTTCEETTBCCC-SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             CcceEEEcccccccccCCCCC-CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence            445899999999987654332 11222          22233  99999              21110            


Q ss_pred             ceec---------------------c-----cc-----------CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCC
Q 046594          239 ECLD---------------------Q-----RL-----------YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHP  281 (304)
Q Consensus       239 ~~~~---------------------~-----~~-----------~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rp  281 (304)
                      .+.+                     .     ..           ......++...+..+.+|+.+||+     .||++||
T Consensus       252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rp  326 (373)
T 1q8y_A          252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ-----LDPRKRA  326 (373)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGC-----SSTTTCB
T ss_pred             HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhc-----cCccccC
Confidence            0000                     0     00           000113456778899999999999     9999999


Q ss_pred             CHHHHHHH
Q 046594          282 KIVDVLSG  289 (304)
Q Consensus       282 s~~~vl~~  289 (304)
                      |+.|+++|
T Consensus       327 t~~ell~h  334 (373)
T 1q8y_A          327 DAGGLVNH  334 (373)
T ss_dssp             CHHHHHTC
T ss_pred             CHHHHhhC
Confidence            99999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.97  E-value=1.8e-31  Score=255.51  Aligned_cols=226  Identities=18%  Similarity=0.133  Sum_probs=165.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeC-----C
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQD-----G  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~-----~  129 (304)
                      .++|++.+.||+|+||.||++.+.   .+|+.||||++.......   .+.+|+. +++++||||+++++++..     .
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~---~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~   89 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQ---DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP   89 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCT---TTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEEC---CCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence            479999999999999999999876   457899999987653332   6777887 999999999999998755     1


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC---eeEc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGG--PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN---AKLA  204 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~---~kl~  204 (304)
                      +...++||||+++|+|.+++.....  .+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.   +||+
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~  166 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII  166 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence            3445999999999999999987543  689999999999999999999764   8999999999999997765   9999


Q ss_pred             ccccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc-------------------
Q 046594          205 GFGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ-------------------  238 (304)
Q Consensus       205 Dfgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~-------------------  238 (304)
                      |||++........ ....++          ...++  +||||              |....                   
T Consensus       167 DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~  246 (676)
T 3qa8_A          167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV  246 (676)
T ss_dssp             SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred             ccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence            9999987654433 111222          22233  89999              21110                   


Q ss_pred             -ceeccccCC-----CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHH-----HHHHHHHHHh
Q 046594          239 -ECLDQRLYI-----PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVD-----VLSGLKQVKQ  295 (304)
Q Consensus       239 -~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~-----vl~~L~~~~~  295 (304)
                       +........     .....+...+..+.+++.+||.     .||++|||+.+     .++.++.+.+
T Consensus       247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~-----~DP~kRPTa~elL~hp~F~~l~~iL~  309 (676)
T 3qa8_A          247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLM-----WHQRQRGTDPQNPNVGCFQALDSILS  309 (676)
T ss_dssp             CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSC-----SSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred             hhhhccccccccccCCchhhchhhhHHHHHHHHHHcc-----CCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence             000111100     0123445678899999999999     99999999988     4456665554

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=1.2e-31  Score=240.14  Aligned_cols=150  Identities=21%  Similarity=0.238  Sum_probs=122.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCc------ccceeeeeeCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLN------IVTLLGYPQDGL  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~n------iv~~~~~~~~~~  130 (304)
                      ..+|++.+.||+|+||.||++.+...  ++..||+|+++...... .+..|+. ++.++|++      ++.+++++...+
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHAR--GKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCC--CceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            46899999999999999999987532  23789999997644333 5666666 77777665      888889888774


Q ss_pred             CceEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee--------------
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL--------------  195 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill--------------  195 (304)
                       .+++||||+ +++|.+.+.... ..+++..++.++.|++.||+|||+.   +|+||||||+|||+              
T Consensus        96 -~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~  170 (355)
T 2eu9_A           96 -HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS  170 (355)
T ss_dssp             -EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred             -eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence             559999999 557777776554 3799999999999999999999654   89999999999999              


Q ss_pred             -----CCCCCeeEcccccccccCCC
Q 046594          196 -----DELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       196 -----~~~~~~kl~Dfgla~~~~~~  215 (304)
                           +.++.+||+|||+++.....
T Consensus       171 ~~~~~~~~~~~kl~Dfg~~~~~~~~  195 (355)
T 2eu9_A          171 CEEKSVKNTSIRVADFGSATFDHEH  195 (355)
T ss_dssp             CCEEEESCCCEEECCCTTCEETTSC
T ss_pred             ccccccCCCcEEEeecCcccccccc
Confidence                 56789999999999875443

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.97  E-value=2.1e-31  Score=245.75  Aligned_cols=215  Identities=17%  Similarity=0.128  Sum_probs=151.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+|+..+.||+|+||.|+....    .+++.||||++....... +.+|+. ++.+ +||||+++++++.+. ..+|+||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~----~~~~~vAvK~~~~~~~~~-~~~E~~~l~~l~~HpnIv~l~~~~~~~-~~~~lv~   97 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGM----FDNRDVAVKRILPECFSF-ADREVQLLRESDEHPNVIRYFCTEKDR-QFQYIAI   97 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEE----SSSSEEEEEEECTTTEEE-CHHHHHHHHHSCCCTTBCCEEEEEEET-TEEEEEE
T ss_pred             EEEecCCeeecCcCEEEEEEEE----eCCeEEEEEEECHHHHHH-HHHHHHHHHhccCCCCcCeEEEEEecC-CEEEEEE
Confidence            3689999999999999764322    367999999997644333 344555 8888 899999999999877 4459999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-----CCCeeEccccccccc
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-----LCNAKLAGFGAANYC  212 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-----~~~~kl~Dfgla~~~  212 (304)
                      ||+++ +|.+++......+.+..++.++.|++.||+|||+.   +|+||||||+|||++.     ...+||+|||+++..
T Consensus        98 E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A           98 ELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             ECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             ECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            99964 99999988765666667789999999999999765   8999999999999953     235789999999876


Q ss_pred             CCCCC-----Cccccc-------------Ccccc--ccccc--------CCCCc-----------ceeccccCCCCCCcc
Q 046594          213 SGGSN-----RRNCEK-------------TSEMA--EDIND--------FVGGQ-----------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       213 ~~~~~-----~~~~~~-------------~~~~s--~DV~S--------~~~~~-----------~~~~~~~~~~~~~~~  253 (304)
                      .....     ....++             ....+  +||||        ...+.           ..............+
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  253 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE  253 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTT
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCcc
Confidence            53321     111122             11222  89999        11011           000000000011122


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ......+.+|+.+||+     .||.+|||+.++++|
T Consensus       254 ~~~~~~~~~li~~~L~-----~dP~~Rps~~evl~h  284 (432)
T 3p23_A          254 KHEDVIARELIEKMIA-----MDPQKRPSAKHVLKH  284 (432)
T ss_dssp             CHHHHHHHHHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             ccccHHHHHHHHHHHh-----CCHhhCCCHHHHHhC
Confidence            3456678899999999     999999999999954

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=9.1e-31  Score=241.78  Aligned_cols=214  Identities=17%  Similarity=0.155  Sum_probs=149.6

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEe
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      .|...+.||+|+||+||.+..    .+|+.||||++..... +.+..|+. ++++ +||||+++++++.+. ..+++|||
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~----~~g~~vAvK~~~~~~~-~~~~~E~~~l~~l~~HpnIv~~~~~~~~~-~~~~lv~E   89 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGS----FQGRPVAVKRMLIDFC-DIALMEIKLLTESDDHPNVIRYYCSETTD-RFLYIALE   89 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEE----SSSSEEEEEEEEGGGH-HHHHHHHHHHHHHTTSTTBCCEEEEEECS-SEEEEEEC
T ss_pred             eeeccCeEeeCCCeEEEEEEE----ECCeEEEEEEEcHHHH-HHHHHHHHHHHhccCCCCcCeEEEEEecC-CeEEEEEe
Confidence            456678899999999986432    3689999999876443 34445555 7665 899999999998877 45599999


Q ss_pred             ecCCCChhhHhhhcCCC------CCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-------------C
Q 046594          139 FMQRGSLRWNLREKGGP------LDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-------------C  199 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~------l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-------------~  199 (304)
                      |++ |+|.+++......      .++..++.++.|++.||+|||+.   +|+||||||+|||++.+             +
T Consensus        90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~  165 (434)
T 2rio_A           90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENL  165 (434)
T ss_dssp             CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred             cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCce
Confidence            996 5999999876421      12334578999999999999765   89999999999999754             4


Q ss_pred             CeeEcccccccccCCCCC------Cccccc----------C-------cccc--ccccc--------CCCCc--------
Q 046594          200 NAKLAGFGAANYCSGGSN------RRNCEK----------T-------SEMA--EDIND--------FVGGQ--------  238 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~------~~~~~~----------~-------~~~s--~DV~S--------~~~~~--------  238 (304)
                      .+||+|||+++.......      ....++          .       ..++  +||||        ...+.        
T Consensus       166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~  245 (434)
T 2rio_A          166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS  245 (434)
T ss_dssp             EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred             EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence            899999999987654321      011122          1       2233  99999        11011        


Q ss_pred             ---ceeccccCCC--CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          239 ---ECLDQRLYIP--NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       239 ---~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                         .+.......+  ....+...+..+.+++.+||+     .||.+|||+.++++|
T Consensus       246 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-----~dP~~Rps~~eil~h  296 (434)
T 2rio_A          246 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMID-----HDPLKRPTAMKVLRH  296 (434)
T ss_dssp             HHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             hHHHHhcCCCCcccccccccccchHHHHHHHHHHhh-----CChhhCCCHHHHHhC
Confidence               1111111000  111234567889999999999     999999999999874

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.96  E-value=6.8e-30  Score=234.50  Aligned_cols=216  Identities=14%  Similarity=0.062  Sum_probs=148.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCC-Cccccee----------
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSH-LNIVTLL----------  123 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h-~niv~~~----------  123 (304)
                      .|+..+.||+|+||.||++.+.   .+|+.||||++......     ..+++|.. ++.++| +|.....          
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~---~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQ---ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             eEEEecccccCCCEEEEEEEec---CCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            3667789999999999999976   45789999998843322     27778888 888877 3221111          


Q ss_pred             -----------eeeeCC----CCceEEEEeecCCCChhhHhhh------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 046594          124 -----------GYPQDG----LQRRCLVFEFMQRGSLRWNLRE------KGGPLDWEKRLAIALQIDSANQMVCMYSKPP  182 (304)
Q Consensus       124 -----------~~~~~~----~~~~~lv~e~~~~gsL~~~l~~------~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~  182 (304)
                                 .++...    ...++++|+++ +++|.+++..      .+..+++..++.++.|++.||+|||+.   +
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~  231 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G  231 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence                       111111    12347777776 5699998852      233688899999999999999999764   8


Q ss_pred             eeecCCCCCCeeeCCCCCeeEcccccccccCCCCC--Cccccc-----------------Ccccc--ccccc--------
Q 046594          183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN--RRNCEK-----------------TSEMA--EDIND--------  233 (304)
Q Consensus       183 ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~-----------------~~~~s--~DV~S--------  233 (304)
                      |+||||||+|||++.++.+||+|||+++.......  .+ ..+                 ...++  +||||        
T Consensus       232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el  310 (413)
T 3dzo_A          232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI  310 (413)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred             cccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence            99999999999999999999999999876543321  11 111                 11122  89999        


Q ss_pred             ------CCCCc--ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHH
Q 046594          234 ------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVK  294 (304)
Q Consensus       234 ------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~  294 (304)
                            |....  +.....+   .  .....+..+.+++.+||+     .||++|||+.+++++  ++.+.
T Consensus       311 ltg~~Pf~~~~~~~~~~~~~---~--~~~~~~~~~~~li~~~l~-----~dP~~Rpt~~~~l~~~~~~~~~  371 (413)
T 3dzo_A          311 WCADLPNTDDAALGGSEWIF---R--SCKNIPQPVRALLEGFLR-----YPKEDRLLPLQAMETPEYEQLR  371 (413)
T ss_dssp             HHSSCCCCTTGGGSCSGGGG---S--SCCCCCHHHHHHHHHHTC-----SSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHCCCCCCCcchhhhHHHHH---h--hcccCCHHHHHHHHHHcc-----CChhhCcCHHHHHhCHHHHHHH
Confidence                  21111  1222222   1  112345789999999999     999999999888765  44443

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=5.1e-27  Score=223.22  Aligned_cols=121  Identities=19%  Similarity=0.164  Sum_probs=102.5

Q ss_pred             CcEEEEEEeccccc---------h---hHHHHHHH-hhCC-CCCcccceeeeeeCCCCceEEEEeecCCCChhhHhhhcC
Q 046594           88 LTVVAVKARRYMAS---------Q---TKLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKG  153 (304)
Q Consensus        88 ~~~vavK~~~~~~~---------~---~~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~  153 (304)
                      |+.+++|.+.....         +   .+|++|+. |+++ .|+||+++++++.+++ .+||||||++|++|.+++...+
T Consensus       259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~-~~yLVMEyv~G~~L~d~i~~~~  337 (569)
T 4azs_A          259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ-SGWLVMEKLPGRLLSDMLAAGE  337 (569)
T ss_dssp             CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS-EEEEEEECCCSEEHHHHHHTTC
T ss_pred             cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC-EEEEEEecCCCCcHHHHHHhCC
Confidence            68899999975421         1   16788888 9999 7999999999999884 4599999999999999998876


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          154 GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       154 ~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                       +++..   .|+.||+.||+|+|+.   |||||||||+|||++.+|.+||+|||+|+......
T Consensus       338 -~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~  393 (569)
T 4azs_A          338 -EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC  393 (569)
T ss_dssp             -CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred             -CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence             67764   4889999999999765   89999999999999999999999999998776543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.89  E-value=5.3e-24  Score=201.31  Aligned_cols=132  Identities=14%  Similarity=0.147  Sum_probs=102.6

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccch----------hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----------TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..+.||+|+||.||++..     .+..+++|+.......          ..+.+|+. +++++||||+++..++...+..
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~  414 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-----LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNK  414 (540)
T ss_dssp             --------CCEEEEEEEC-----SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTT
T ss_pred             CCCEEeeCCCEEEEEEEE-----CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCcc
Confidence            356899999999999944     3678899986542211          14677888 9999999999766666665455


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                       |+||||+++++|.+++..         +..++.|+++||+|||+.   +|+||||||+|||++.  .+||+|||+++..
T Consensus       415 -~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~  479 (540)
T 3en9_A          415 -RIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKIS  479 (540)
T ss_dssp             -EEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred             -EEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence             999999999999999876         568999999999999764   8999999999999998  9999999999987


Q ss_pred             CCC
Q 046594          213 SGG  215 (304)
Q Consensus       213 ~~~  215 (304)
                      ...
T Consensus       480 ~~~  482 (540)
T 3en9_A          480 NLD  482 (540)
T ss_dssp             CCH
T ss_pred             CCc
Confidence            553

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.88  E-value=9.5e-23  Score=177.51  Aligned_cols=131  Identities=14%  Similarity=0.086  Sum_probs=104.2

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccc--------------------hhHHHHHHH-hhCCCCCccc
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--------------------QTKLEEEIL-LKSSSHLNIV  120 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--------------------~~~~~~e~~-l~~l~h~niv  120 (304)
                      |++.+.||+|+||.||++.+    .+|+.||+|.++....                    ...+..|+. +++++  | +
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~----~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~  164 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS----EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-L  164 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE----TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-S
T ss_pred             EEecCEeccCCCceEEEEEe----CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-C
Confidence            55679999999999999987    3578999999964321                    124667777 88888  5 6


Q ss_pred             ceeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCC
Q 046594          121 TLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN  200 (304)
Q Consensus       121 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~  200 (304)
                      ++.+++.. +.. ++||||+++|+|.+ +..       .....++.|++.||+|||+.   ||+||||||+|||++ ++.
T Consensus       165 ~v~~~~~~-~~~-~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~  230 (282)
T 1zar_A          165 AVPKVYAW-EGN-AVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEG  230 (282)
T ss_dssp             SSCCEEEE-ETT-EEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTE
T ss_pred             CcCeEEec-cce-EEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCc
Confidence            67665543 244 99999999999998 422       22447999999999999764   899999999999999 999


Q ss_pred             eeEcccccccccC
Q 046594          201 AKLAGFGAANYCS  213 (304)
Q Consensus       201 ~kl~Dfgla~~~~  213 (304)
                      +||+|||+++...
T Consensus       231 vkl~DFG~a~~~~  243 (282)
T 1zar_A          231 IWIIDFPQSVEVG  243 (282)
T ss_dssp             EEECCCTTCEETT
T ss_pred             EEEEECCCCeECC
Confidence            9999999997653

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.84  E-value=2.3e-21  Score=166.60  Aligned_cols=136  Identities=18%  Similarity=0.150  Sum_probs=101.3

Q ss_pred             hccccccCCccccceeeecceeecCCCcE--EEEEEeccccch--------------------------hHHHHHHH-hh
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTV--VAVKARRYMASQ--------------------------TKLEEEIL-LK  112 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~--vavK~~~~~~~~--------------------------~~~~~e~~-l~  112 (304)
                      |++.+.||+|+||.||++.+.   .+|+.  ||||+++.....                          ..+..|+. ++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~---~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  125 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGV---FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE  125 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEE---ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEc---CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence            567899999999999999874   35778  999987543111                          14566777 88


Q ss_pred             CCCCCcc--cceeeeeeCCCCceEEEEeecCC-C----ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 046594          113 SSSHLNI--VTLLGYPQDGLQRRCLVFEFMQR-G----SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYH  185 (304)
Q Consensus       113 ~l~h~ni--v~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH  185 (304)
                      .+.|+++  ..++++    +.. +|||||+.+ |    +|.+....    .++..+..++.|++.||.|||.  +.||+|
T Consensus       126 ~l~~~~i~~p~~~~~----~~~-~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givH  194 (258)
T 1zth_A          126 RAKEAGVSVPQPYTY----MKN-VLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVH  194 (258)
T ss_dssp             HHHHTTCCCCCEEEE----ETT-EEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEEC
T ss_pred             HHHhCCCCCCeEEEc----CCC-EEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEe
Confidence            8888764  333332    134 899999942 4    56655432    2345678899999999999971  338999


Q ss_pred             cCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          186 GNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       186 ~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |||||+|||++.  .++|+|||+|....
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccCC
Confidence            999999999998  89999999997653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.73  E-value=3.3e-18  Score=153.72  Aligned_cols=137  Identities=12%  Similarity=0.007  Sum_probs=95.9

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccch------------h----HHHHHHH-hhCCCCCcccceee
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ------------T----KLEEEIL-LKSSSHLNIVTLLG  124 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~------------~----~~~~e~~-l~~l~h~niv~~~~  124 (304)
                      |++.+.||.|+||.||.+.+.    +|+.||||+.+.....            .    ....+.. .....|+|+.+++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~----~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~  172 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE----KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE  172 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT----TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCEeeeCCceEEEEEECC----CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence            889999999999999999863    6899999997643110            0    1111111 22224555555543


Q ss_pred             eeeCC------CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC
Q 046594          125 YPQDG------LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL  198 (304)
Q Consensus       125 ~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~  198 (304)
                      .....      ..+ +|||||++|++|.++...       .....++.|++.+|.|||..   |||||||||.|||++.+
T Consensus       173 ~gv~vp~p~~~~~~-~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          173 EGFPVPEPIAQSRH-TIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE  241 (397)
T ss_dssp             TTCSCCCEEEEETT-EEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred             cCCCCCeeeeccCc-eEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence            32211      133 799999999888765432       12456889999999999764   89999999999999877


Q ss_pred             C----------CeeEcccccccccC
Q 046594          199 C----------NAKLAGFGAANYCS  213 (304)
Q Consensus       199 ~----------~~kl~Dfgla~~~~  213 (304)
                      +          .+.|+||+-+....
T Consensus       242 gd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          242 KDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             CCcccccccccceEEEEeCCcccCC
Confidence            6          38999999765543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.36  E-value=2.8e-12  Score=109.72  Aligned_cols=141  Identities=10%  Similarity=0.032  Sum_probs=105.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEecccc--chhHHHHHHH-hhCCC-CCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA--SQTKLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~  134 (304)
                      +..|++....+.|+.+.||+...     ++..+++|......  ....++.|.. ++.+. +..+.++++++...+.. |
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~-----~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~-~   86 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS-N   86 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE-E
T ss_pred             hccceeEeeccCCCCCeEEEEEC-----CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce-E
Confidence            45788888899899999998764     25789999987532  1225666666 77663 66778899888776444 9


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS-----------------------------------  179 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~-----------------------------------  179 (304)
                      +||||++|.+|.+.+..      ......++.+++++|+.||...                                   
T Consensus        87 lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            99999999999876321      1223467889999999999821                                   


Q ss_pred             ---------------------CCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          180 ---------------------KPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       180 ---------------------~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                                           ...++|+|++|.||+++.+..+.|+||+.+..
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                 14589999999999998765567999987643

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.24  E-value=2.1e-11  Score=103.69  Aligned_cols=136  Identities=12%  Similarity=0.048  Sum_probs=92.5

Q ss_pred             hccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCc--ccceeeeeeCCCCceEEEEe
Q 046594           62 RRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLN--IVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        62 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~n--iv~~~~~~~~~~~~~~lv~e  138 (304)
                      +.+....+.|..+.||+...    .+|..+++|..... ....+..|.. ++.+.+.+  +.+++++...++.. ++|||
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~----~~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~-~~v~e   95 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSA----QGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRD-WLLLG   95 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEEC----TTSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCE-EEEEE
T ss_pred             CceEecccCCCCceEEEEec----CCCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCC-EEEEE
Confidence            34333334555688987754    35678999998754 2235566666 77664444  45588877766444 99999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS---------------------------------------  179 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~---------------------------------------  179 (304)
                      |++|.+|.  ..    ..+.   ..++.++++.|+.||...                                       
T Consensus        96 ~i~G~~l~--~~----~~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (264)
T 1nd4_A           96 EVPGQDLL--SS----HLAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA  166 (264)
T ss_dssp             CCSSEETT--TS----CCCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred             ecCCcccC--cC----cCCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence            99998884  21    1222   256777788888887642                                       


Q ss_pred             ----------------CCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          180 ----------------KPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       180 ----------------~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                                      ..+++|+|++|.||+++.++.+.|+||+.+...
T Consensus       167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence                            123999999999999987766679999987543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.21  E-value=8.2e-11  Score=105.31  Aligned_cols=140  Identities=13%  Similarity=0.131  Sum_probs=102.0

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEec--cccc---hhHHHHHHH-hhCCC--CCcccceeeeeeCCC--Cce
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARR--YMAS---QTKLEEEIL-LKSSS--HLNIVTLLGYPQDGL--QRR  133 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~--~~~~---~~~~~~e~~-l~~l~--h~niv~~~~~~~~~~--~~~  133 (304)
                      ..+.++.|.++.+|+....     +..+++|+..  ....   ...+.+|.. ++.+.  +..+.+++.++.+..  +..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~-----~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP-----GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS-----SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEEC-----CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence            4578999999999987653     3678899876  3321   225666666 77765  455778888876652  224


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS----------------------------------  179 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~----------------------------------  179 (304)
                      |+||||++|..+.+...   ..++......++.++++.|+.||...                                  
T Consensus       117 ~~vme~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES  193 (359)
T ss_dssp             EEEEECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred             EEEEEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence            89999999988854221   14778888999999999999999731                                  


Q ss_pred             ---------------------CCCeeecCCCCCCeeeCCCCC--eeEcccccccc
Q 046594          180 ---------------------KPPIYHGNITSDNILLDELCN--AKLAGFGAANY  211 (304)
Q Consensus       180 ---------------------~~~ivH~dlkp~Nill~~~~~--~kl~Dfgla~~  211 (304)
                                           ...++|||++|.|||++.++.  +.|.||+.+..
T Consensus       194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                 257999999999999997753  68999998764

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.76  E-value=2.5e-08  Score=86.95  Aligned_cols=137  Identities=18%  Similarity=0.124  Sum_probs=95.6

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCC-CCCc--ccceeeeeeCCCC--ceEEEEe
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSS-SHLN--IVTLLGYPQDGLQ--RRCLVFE  138 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l-~h~n--iv~~~~~~~~~~~--~~~lv~e  138 (304)
                      .+.++.|....+|...        ..+++|..........+..|.. ++.+ .+..  +.+++......+.  ..|+|||
T Consensus        25 i~~~~~G~~n~v~~v~--------~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN--------RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             CCEEEECSSEEEEEST--------TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred             eEecCCCCcceEEEEC--------CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence            4567888888888754        4588998765433346777777 7666 3333  3344444333321  2389999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS---------------------------------------  179 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~---------------------------------------  179 (304)
                      +++|.+|.+....   .++..++..++.+++..|+.||...                                       
T Consensus        97 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  173 (304)
T 3sg8_A           97 KIKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV  173 (304)
T ss_dssp             CCCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             ccCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            9999888754332   4777888888889988888888511                                       


Q ss_pred             ----------------CCCeeecCCCCCCeeeCC--CCCeeEccccccccc
Q 046594          180 ----------------KPPIYHGNITSDNILLDE--LCNAKLAGFGAANYC  212 (304)
Q Consensus       180 ----------------~~~ivH~dlkp~Nill~~--~~~~kl~Dfgla~~~  212 (304)
                                      ...++|+|++|.||+++.  +..+.++||+.+...
T Consensus       174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence                            135799999999999998  456789999987654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.68  E-value=1.4e-07  Score=82.42  Aligned_cols=137  Identities=16%  Similarity=0.178  Sum_probs=89.0

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCC---cccceeeeeeCCCCceEEEEeec
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHL---NIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~---niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      .+.++.|....+|..        +..+++|+.........+..|.. |+.+.+.   .+.+.+.++....+..+++|||+
T Consensus        24 v~~l~~G~~n~v~~v--------g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i   95 (306)
T 3tdw_A           24 VESLGEGFRNYAILV--------NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV   95 (306)
T ss_dssp             EEEEEECSSEEEEEE--------TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred             eeecCCCcceeEEEE--------CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence            345677777777765        35678888643322336777777 8777542   24556666643334448999999


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc------------------------------------------
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY------------------------------------------  178 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~------------------------------------------  178 (304)
                      +|.+|.+..-.   .++......++.++++.|+.||..                                          
T Consensus        96 ~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           96 QGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             CSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             CCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            99888763221   244455555555555555555532                                          


Q ss_pred             ---------------CCCCeeecCCCCCCeeeCC---CCCe-eEccccccccc
Q 046594          179 ---------------SKPPIYHGNITSDNILLDE---LCNA-KLAGFGAANYC  212 (304)
Q Consensus       179 ---------------~~~~ivH~dlkp~Nill~~---~~~~-kl~Dfgla~~~  212 (304)
                                     ....++|+|++|.||+++.   ++.+ .|+||+.+..-
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                           2335799999999999987   4554 89999987653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.44  E-value=8.8e-07  Score=75.55  Aligned_cols=134  Identities=13%  Similarity=0.077  Sum_probs=87.1

Q ss_pred             cCCcccc-ceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCC-CCcccceeeeeeCCCCceEEEEeecCCCC
Q 046594           68 FGDSVEG-LTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRCLVFEFMQRGS  144 (304)
Q Consensus        68 lg~g~~g-~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~lv~e~~~~gs  144 (304)
                      +..|..| .||+....   .++..+.+|+..... ...+..|.. |+.+. +--+.++++++.+.+.. ++|||+++|.+
T Consensus        32 ~~~G~S~~~v~rl~~~---~~~~~~~lk~~~~~~-~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~-~lvme~l~G~~  106 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGK---PNAPELFLKHGKGSV-ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDA-WLLTTAIPGKT  106 (272)
T ss_dssp             EECSSSSCEEEEEECC---TTCCCEEEEEEETHH-HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEE-EEEEECCCSEE
T ss_pred             ccCCCcCCeEEEEEec---CCCeEEEEEECCCCC-HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeE-EEEEEeeCCcc
Confidence            4445555 46665432   345789999876543 225556666 66653 22356778888777555 99999999988


Q ss_pred             hhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc----------------------------------------------
Q 046594          145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY----------------------------------------------  178 (304)
Q Consensus       145 L~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~----------------------------------------------  178 (304)
                      +.+......     .....+..+++..|+-||..                                              
T Consensus       107 ~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (272)
T 4gkh_A          107 AFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK  181 (272)
T ss_dssp             HHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred             ccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence            876554321     12234555555556656532                                              


Q ss_pred             ---------CCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          179 ---------SKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       179 ---------~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                               ....++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                     112378999999999999877777999998754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.28  E-value=1.9e-06  Score=76.60  Aligned_cols=83  Identities=6%  Similarity=0.025  Sum_probs=50.0

Q ss_pred             cccc-CCccccceeeecceeecC---CCcEEEEEEecccc-----chhHHHHHHH-hhCCC-C--CcccceeeeeeCCC-
Q 046594           65 LKSF-GDSVEGLTLIKGDRAVSR---NLTVVAVKARRYMA-----SQTKLEEEIL-LKSSS-H--LNIVTLLGYPQDGL-  130 (304)
Q Consensus        65 ~~~l-g~g~~g~v~~~~~~~~~~---~~~~vavK~~~~~~-----~~~~~~~e~~-l~~l~-h--~niv~~~~~~~~~~-  130 (304)
                      .+.+ +.|....+|+........   ++..+++|......     ....+..|.. ++.+. +  -.+.+++.++.+.. 
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3566 788888888765420000   14678899876543     1124555555 66553 2  34566777765542 


Q ss_pred             -CceEEEEeecCCCChhh
Q 046594          131 -QRRCLVFEFMQRGSLRW  147 (304)
Q Consensus       131 -~~~~lv~e~~~~gsL~~  147 (304)
                       +..++||||++|..+.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             22389999999877653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.09  E-value=1.9e-05  Score=69.41  Aligned_cols=32  Identities=19%  Similarity=0.328  Sum_probs=28.4

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ...++|+|+++.|||++.++.+.|+||+.+..
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            56899999999999998888899999997754

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.02  E-value=2.6e-05  Score=70.29  Aligned_cols=74  Identities=15%  Similarity=0.046  Sum_probs=43.2

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccc---------hhHHHHHHH-hhCCC--CCccc-ceeeeeeCCC
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS---------QTKLEEEIL-LKSSS--HLNIV-TLLGYPQDGL  130 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~e~~-l~~l~--h~niv-~~~~~~~~~~  130 (304)
                      ..+.+|.|.++.||++....   ++..++||.......         .+.+..|.. ++.+.  .+..+ +++.+  +.+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~---~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~  108 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQE---HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE  108 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC-------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT
T ss_pred             EEEECCCCceEEEEEEEECC---CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCC
Confidence            35689999999999886432   357899997653211         123444554 55542  13333 45544  233


Q ss_pred             CceEEEEeecCCC
Q 046594          131 QRRCLVFEFMQRG  143 (304)
Q Consensus       131 ~~~~lv~e~~~~g  143 (304)
                      .. ++||||+++.
T Consensus       109 ~~-~lvmE~l~g~  120 (397)
T 2olc_A          109 MA-VTVMEDLSHL  120 (397)
T ss_dssp             TT-EEEECCCTTS
T ss_pred             cc-EEEEEeCCCc
Confidence            44 8999999763

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.93  E-value=5.6e-05  Score=68.73  Aligned_cols=33  Identities=9%  Similarity=0.274  Sum_probs=28.3

Q ss_pred             CCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          179 SKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       179 ~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +...++|+|++|.|||++.++ ++++||+.+..-
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            456899999999999999876 999999887643

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.85  E-value=0.00011  Score=64.09  Aligned_cols=135  Identities=17%  Similarity=0.179  Sum_probs=84.8

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCC---CCcccceeeeeeCCCCceEEEEeec
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS---HLNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~---h~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      .+.++.|....+|+...     ++..+++|...... ...+..|.. |+.+.   ...+.+++.++...+.. ++||||+
T Consensus        41 ~~~l~gG~~n~~y~v~~-----~~~~~vlK~~~~~~-~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~-~lvme~l  113 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND-----EVQTVFVKINERSY-RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHS-FLLLEAL  113 (312)
T ss_dssp             EEEECCSSSSEEEEEES-----SSCEEEEEEEEGGG-HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEE-EEEEECC
T ss_pred             eEEeCCccceeeeEEEE-----CCCeEEEEeCCccc-HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCce-EEEEEec
Confidence            46789999999988764     35788899876542 335666666 66663   35677888887766445 9999999


Q ss_pred             CCCChhh-----------HhhhcCC---------------------CCCHHHHH---HHH----------------HHHH
Q 046594          141 QRGSLRW-----------NLREKGG---------------------PLDWEKRL---AIA----------------LQID  169 (304)
Q Consensus       141 ~~gsL~~-----------~l~~~~~---------------------~l~~~~~~---~i~----------------~qi~  169 (304)
                      ++..+..           .|+....                     .-+|....   ++.                .+++
T Consensus       114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~  193 (312)
T 3jr1_A          114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV  193 (312)
T ss_dssp             CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred             cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence            9876521           1222211                     01343321   111                1111


Q ss_pred             HHH-HHHhh-cCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          170 SAN-QMVCM-YSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       170 ~~l-~~Lh~-~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                      ..+ ..|.. ...+.++|+|+.+.|++++.++ +.|.||+
T Consensus       194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            111 22321 1256799999999999999887 8899984

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.72  E-value=0.00018  Score=61.84  Aligned_cols=76  Identities=18%  Similarity=0.090  Sum_probs=51.4

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCC---cccceeeeeeCCCCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHL---NIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~---niv~~~~~~~~~~~~~~  134 (304)
                      +....+.+|.|..+.||+...    .+|+.+.+|+.......  ..++.|.. |+.+.-.   -+.+++++.    .. +
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l----~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~-~   86 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVEL----ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DR-T   86 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEE----TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TT-E
T ss_pred             CeEEEEecCCCCCeEEEEEEE----CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----Cc-e
Confidence            445577899999999987753    57899999987654332  26777777 7766322   234444432    33 8


Q ss_pred             EEEeecCCCCh
Q 046594          135 LVFEFMQRGSL  145 (304)
Q Consensus       135 lv~e~~~~gsL  145 (304)
                      +||||++++..
T Consensus        87 lv~e~l~~~~~   97 (288)
T 3f7w_A           87 LAMEWVDERPP   97 (288)
T ss_dssp             EEEECCCCCCC
T ss_pred             EEEEeecccCC
Confidence            99999987654

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.50  E-value=0.00016  Score=62.51  Aligned_cols=32  Identities=13%  Similarity=0.069  Sum_probs=26.1

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ...++|+|+.+.||+ ..++.+.++||..+..-
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            345899999999999 55677899999877643

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.26  E-value=0.0026  Score=55.60  Aligned_cols=34  Identities=15%  Similarity=0.168  Sum_probs=28.5

Q ss_pred             CCCCeeecCCCCCCeeeCCC----CCeeEccccccccc
Q 046594          179 SKPPIYHGNITSDNILLDEL----CNAKLAGFGAANYC  212 (304)
Q Consensus       179 ~~~~ivH~dlkp~Nill~~~----~~~kl~Dfgla~~~  212 (304)
                      ....++|||+.+.||+++.+    +.+.++||+.+..-
T Consensus       181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            34579999999999999874    67899999987654

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.16  E-value=0.0015  Score=59.93  Aligned_cols=73  Identities=12%  Similarity=0.069  Sum_probs=41.9

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcc-cceeeeeeCCCCceEEEEeecC
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNI-VTLLGYPQDGLQRRCLVFEFMQ  141 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~ni-v~~~~~~~~~~~~~~lv~e~~~  141 (304)
                      .+.|+.|....+|+....+   .+..+++|+.......- ....|.. ++.+...++ .++++.+. +    .+|+||++
T Consensus       113 i~~lsgG~tN~~y~v~~~~---~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~-~----G~v~e~I~  184 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMS---KQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT-N----GRIEEFMD  184 (458)
T ss_dssp             EEEECC--CEEEEEEEETT---TTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET-T----EEEEECCC
T ss_pred             EEEcCCCeEeEEEEEEECC---CCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC-C----eEEEEeeC
Confidence            3467778788888876531   23678899875432111 2244554 666654444 45666652 2    46999998


Q ss_pred             CCCh
Q 046594          142 RGSL  145 (304)
Q Consensus       142 ~gsL  145 (304)
                      |.+|
T Consensus       185 G~~l  188 (458)
T 2qg7_A          185 GYAL  188 (458)
T ss_dssp             SEEC
T ss_pred             CccC
Confidence            7544

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.15  E-value=0.00084  Score=58.36  Aligned_cols=44  Identities=16%  Similarity=0.103  Sum_probs=32.1

Q ss_pred             HHHHHHHHhhc----CCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          168 IDSANQMVCMY----SKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       168 i~~~l~~Lh~~----~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      +...++++...    ...+++|+|+++.|||++.++.+.++||+.+..
T Consensus       170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            34455555532    235789999999999999876568999987754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.11  E-value=0.003  Score=54.90  Aligned_cols=31  Identities=19%  Similarity=0.191  Sum_probs=26.2

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ...++|+|+++.|||++ + .+.++||+.+..-
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g  224 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG  224 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence            45689999999999999 4 8999999877543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.02  E-value=0.0014  Score=59.74  Aligned_cols=76  Identities=13%  Similarity=0.155  Sum_probs=44.8

Q ss_pred             ccccCCccccceeeecceee----cCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcc-cceeeeeeCCCCceEEEEe
Q 046594           65 LKSFGDSVEGLTLIKGDRAV----SRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNI-VTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~ni-v~~~~~~~~~~~~~~lv~e  138 (304)
                      .+.++.|....+|+....+.    ..++..+++|+.........+..|.. ++.+...++ .++++.+. +    .+|+|
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~-~----g~v~e  152 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFS-G----GRLEE  152 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEET-T----EEEEC
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeC-C----CEEEE
Confidence            56788888888998865321    01247899998854222122223444 665533333 45666543 2    48999


Q ss_pred             ecCCCCh
Q 046594          139 FMQRGSL  145 (304)
Q Consensus       139 ~~~~gsL  145 (304)
                      |++|.+|
T Consensus       153 ~l~G~~l  159 (429)
T 1nw1_A          153 YIPSRPL  159 (429)
T ss_dssp             CCCEEEC
T ss_pred             EeCCccc
Confidence            9986444

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.98  E-value=0.0021  Score=57.49  Aligned_cols=142  Identities=13%  Similarity=0.066  Sum_probs=78.2

Q ss_pred             ccccCCccccceeeecceee----cCCCcEEEEEEeccccc-hhHHHHHHH-hhCCCCCcc-cceeeeeeCCCCceEEEE
Q 046594           65 LKSFGDSVEGLTLIKGDRAV----SRNLTVVAVKARRYMAS-QTKLEEEIL-LKSSSHLNI-VTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~----~~~~~~vavK~~~~~~~-~~~~~~e~~-l~~l~h~ni-v~~~~~~~~~~~~~~lv~  137 (304)
                      .+.+..|....+|+......    ..++..+.+|+...... ...+..|.. ++.+.-.++ .++++.+.+     .+||
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-----g~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE-----GRLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT-----EEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC-----ccEE
Confidence            35677788888888765321    11357899998643221 223444555 655532233 456665542     3899


Q ss_pred             eecCCCChhhH-----------------hhhcC----CCC--CHHHHHHHHHHHHH-------------------HHHHH
Q 046594          138 EFMQRGSLRWN-----------------LREKG----GPL--DWEKRLAIALQIDS-------------------ANQMV  175 (304)
Q Consensus       138 e~~~~gsL~~~-----------------l~~~~----~~l--~~~~~~~i~~qi~~-------------------~l~~L  175 (304)
                      ||++|.+|..-                 ++...    ...  -+.+..++..++..                   .+++|
T Consensus       130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L  209 (379)
T 3feg_A          130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL  209 (379)
T ss_dssp             ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred             EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence            99998655311                 11111    112  24555555544422                   23333


Q ss_pred             hh-----cCCCCeeecCCCCCCeeeCCC----CCeeEcccccccc
Q 046594          176 CM-----YSKPPIYHGNITSDNILLDEL----CNAKLAGFGAANY  211 (304)
Q Consensus       176 h~-----~~~~~ivH~dlkp~Nill~~~----~~~kl~Dfgla~~  211 (304)
                      ..     .....++|+|+.+.||+++.+    +.+.++||..+..
T Consensus       210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            21     123468999999999999876    7899999988764

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.95  E-value=0.0019  Score=57.41  Aligned_cols=30  Identities=20%  Similarity=0.481  Sum_probs=24.8

Q ss_pred             CCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          181 PPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       181 ~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ..++|+|+++.|||++.++ +.++||..+..
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            4689999999999998654 89999987753

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.75  E-value=0.018  Score=50.55  Aligned_cols=32  Identities=13%  Similarity=0.223  Sum_probs=27.8

Q ss_pred             CCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          181 PPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       181 ~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ..++|+|+.+.||+++.++.+.++||+.+...
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            46899999999999998888999999876543

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.39  E-value=0.0046  Score=56.12  Aligned_cols=141  Identities=10%  Similarity=0.061  Sum_probs=78.9

Q ss_pred             ccccCCccccceeeecceeecCC----CcEEEEEEeccccchh-HHHHHHH-hhCCCCCcc-cceeeeeeCCCCceEEEE
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRN----LTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNI-VTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~----~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~ni-v~~~~~~~~~~~~~~lv~  137 (304)
                      .+.+..|....+|+........+    +..+++|+.......- ....|.. ++.+.-.++ .++++.+ .   . ++|+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~-~---~-~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF-P---E-GRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE-T---T-EEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc-C---C-CEEE
Confidence            45677787888888765421111    5789999875432211 3334444 555532233 4455433 2   2 7999


Q ss_pred             eecCCCChhh--H------------h---hhc-----------CC-CCCHHHHHHHHHHH-------------------H
Q 046594          138 EFMQRGSLRW--N------------L---REK-----------GG-PLDWEKRLAIALQI-------------------D  169 (304)
Q Consensus       138 e~~~~gsL~~--~------------l---~~~-----------~~-~l~~~~~~~i~~qi-------------------~  169 (304)
                      ||++|.+|..  +            +   +..           .. +..+.+...+..++                   .
T Consensus       150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~  229 (424)
T 3mes_A          150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL  229 (424)
T ss_dssp             ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred             EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence            9999865421  0            0   100           10 11244444443322                   2


Q ss_pred             HHHHHHhh---------------------cCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          170 SANQMVCM---------------------YSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       170 ~~l~~Lh~---------------------~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ..+++|..                     .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus       230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            22333321                     11246899999999999 7788999999988764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=92.70  E-value=0.055  Score=48.58  Aligned_cols=30  Identities=30%  Similarity=0.414  Sum_probs=25.0

Q ss_pred             CeeecCCCCCCeee------CCCCCeeEcccccccc
Q 046594          182 PIYHGNITSDNILL------DELCNAKLAGFGAANY  211 (304)
Q Consensus       182 ~ivH~dlkp~Nill------~~~~~~kl~Dfgla~~  211 (304)
                      .++|+|+.+.|||+      +++..+.++||.+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            35799999999999      4566799999988764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=92.13  E-value=0.32  Score=39.70  Aligned_cols=142  Identities=17%  Similarity=0.033  Sum_probs=79.1

Q ss_pred             ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCCCccccc
Q 046594          144 SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEK  223 (304)
Q Consensus       144 sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  223 (304)
                      +|.++|...+.+++++++|.++.|.+.+|.-+-.. +.. ..+=+.|..|++..+|.+.+.+ +.+.........+....
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~~~~~~~~~pe~~~  110 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADDAGEPPPVAGKLGY  110 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C------------CCSS
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-ccccccccCCCChhhcc
Confidence            89999999998999999999999999996554110 001 1233346899999999988774 22110000000000000


Q ss_pred             Ccccc-cccccCC-CCcceeccccCCCCCCcchHHHHHHHHHHHHhccccCC---------------C-----CCCCCCC
Q 046594          224 TSEMA-EDINDFV-GGQECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSN---------------I-----EGNENHP  281 (304)
Q Consensus       224 ~~~~s-~DV~S~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~---------------~-----~dp~~Rp  281 (304)
                      .+... .=|||-+ .--...|-.+   ....+...++.|-+|+..|...|..               .     ..+..|+
T Consensus       111 ~~~te~~~IysLG~tLY~ALDygL---~e~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~  187 (229)
T 2yle_A          111 SQCMETEVIESLGIIIYKALDYGL---KENEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIR  187 (229)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHTTTC---CTTEEECCCHHHHHHHHHHTTCCC--------------------CCSCCCCCC
T ss_pred             ccchHHHHHHHHHHHHHHHhhcCC---CcccchhhCHHHHHHHHHHHhcccccccccccccccccccccccccccccCcC
Confidence            00000 1223200 0003344455   4556666778888898888873200               0     1346888


Q ss_pred             CHHHHHHHHH
Q 046594          282 KIVDVLSGLK  291 (304)
Q Consensus       282 s~~~vl~~L~  291 (304)
                      +..+|++.=+
T Consensus       188 sl~~Vi~~C~  197 (229)
T 2yle_A          188 SYRDVMKLCA  197 (229)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            9999987544

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=86.45  E-value=5.4  Score=32.33  Aligned_cols=88  Identities=9%  Similarity=0.036  Sum_probs=57.9

Q ss_pred             CCCCCcccceeeeeeCCCCceEEEEeecCCC-ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 046594          113 SSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG-SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSD  191 (304)
Q Consensus       113 ~l~h~niv~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~  191 (304)
                      ...||++  -...-.+. +.+.+.++.-+++ ++. .++    .++...+++++.+++..    ...|...-+|--|.|+
T Consensus        46 ~~~~~~f--~~~I~~~e-D~~~i~y~~~~~~~~f~-~i~----~~~~~eKlrll~nl~~L----~~~~~~~r~tf~l~P~  113 (219)
T 4ano_A           46 KEVDPCI--VRDIDVSE-DEVKVVIKPPSSFLTFA-AIR----KTTLLSRIRAAIHLVSK----VKHHSARRLIFIVCPE  113 (219)
T ss_dssp             GGSCSSS--EEEEEECS-SEEEEEEECCTTCEEHH-HHH----TSCHHHHHHHHHHHHHH----HSSCCSSSEECCCCGG
T ss_pred             hccCCCC--CeEEEEeC-CEEEEEEEcCcccCcHH-HHH----hcCHHHHHHHHHHHHHH----HHHhhhCceeEEEeCc
Confidence            3467877  22333333 4435555554333 333 332    47889999999998775    3323335788899999


Q ss_pred             CeeeCCCCCeeEccccccccc
Q 046594          192 NILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       192 Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |+++|.++.+++.-.|+-..+
T Consensus       114 NL~f~~~~~p~i~hRGi~~~l  134 (219)
T 4ano_A          114 NLMFNRALEPFFLHVGVKESL  134 (219)
T ss_dssp             GEEECTTCCEEESCCEETTTB
T ss_pred             eEEEeCCCcEEEEEcCCcccC
Confidence            999999999999988875443

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=84.85  E-value=2.2  Score=34.56  Aligned_cols=90  Identities=9%  Similarity=0.087  Sum_probs=61.1

Q ss_pred             hhCCCCCcccceeeeeeCCCCceEEEEeecCCC-ChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 046594          111 LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG-SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNIT  189 (304)
Q Consensus       111 l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlk  189 (304)
                      +-...||++++. .+-... +.+.+.++.-+.+ ++.. ++    .++...+++++.+++..-++++     .-+|--|.
T Consensus        39 LL~~~~~~Fl~~-~I~e~e-D~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~  106 (215)
T 4ann_A           39 LLEQHSPYFIDA-ELTELR-DSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLA  106 (215)
T ss_dssp             GGGSCCTTBCCE-EEEECS-SEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCS
T ss_pred             HHhccCCcccce-EEEEcc-cEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEe
Confidence            444478888876 444444 3434555544322 3333 32    4788999999999888754442     35788999


Q ss_pred             CCCeeeCCCCCeeEccccccccc
Q 046594          190 SDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       190 p~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      |+|++++.++.+++.=.|+-..+
T Consensus       107 P~NL~f~~~~~p~i~~RGik~~l  129 (215)
T 4ann_A          107 PDELFFTRDGLPIAKTRGLQNVV  129 (215)
T ss_dssp             GGGEEECTTSCEEESCCEETTTB
T ss_pred             cceEEEcCCCCEEEEEccCccCC
Confidence            99999999999999988875444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	304
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-21
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-21
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-19
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-19
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-19
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-19
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-19
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-18
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-18
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-18
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-17
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-17
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-17
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-17
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-17
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-17
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-16
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-16
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-16
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-15
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-15
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-15
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-15
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	8e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-14
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-14
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-14
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-13
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-11
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-09
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-04

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 5e-21
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 5/135 (3%)

Query: 89  TVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
             VAVK  +  A+      E  ++    H N+V LLG   +      +V E+M +GSL  
Sbjct: 31  NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 90

Query: 148 NLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGF 206
            LR +G   L  +  L  +L +  A   +         H ++ + N+L+ E   AK++ F
Sbjct: 91  YLRSRGRSVLGGDCLLKFSLDVCEA---MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDF 147

Query: 207 GAANYCSGGSNRRNC 221
           G     S   +    
Sbjct: 148 GLTKEASSTQDTGKL 162

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.7 bits (217), Expect = 7e-21
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 91  VAVKARRYMASQTKLEEEIL-----LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
           VAVK     A   +  +        L+ + H+NI+  +GY      +  +V ++ +  SL
Sbjct: 33  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP--QLAIVTQWCEGSSL 90

Query: 146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
             +L       +  K + IA Q       +       I H ++ S+NI L E    K+  
Sbjct: 91  YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGD 147

Query: 206 FGAANYCSGGSNRRNCEK 223
           FG A   S  S     E+
Sbjct: 148 FGLATVKSRWSGSHQFEQ 165

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 1e-19
 Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 8/144 (5%)

Query: 89  TVVAVKARRYMASQTKLEE---EI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
            V+A K            +   E+ +L   +   IV   G          +  E M  GS
Sbjct: 32  LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGGS 90

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
           L   L+ K G +  +    +++ +     +  +  K  I H ++   NIL++     KL 
Sbjct: 91  LDQVLK-KAGRIPEQILGKVSIAVIKG--LTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147

Query: 205 GFGAANYCSGGSNRRNCEKTSEMA 228
            FG +               S M+
Sbjct: 148 DFGVSGQLIDSMANSFVGTRSYMS 171

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 2e-19
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 9/150 (6%)

Query: 79  KGDRAVSRNLTVVAVKARRYMASQTKLEE---EI-LLKSSSHLNIVTLLGYPQDGLQRRC 134
           +G   + +    VA+K  +    +   EE   E  ++    +  IV L+G  Q   +   
Sbjct: 27  QGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALM 84

Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
           LV E    G L   L  K   +       +  Q+    + +         H ++ + N+L
Sbjct: 85  LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVL 141

Query: 195 LDELCNAKLAGFGAANYCSGGSNRRNCEKT 224
           L     AK++ FG +       +       
Sbjct: 142 LVNRHYAKISDFGLSKALGADDSYYTARSA 171

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 2e-19
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 9/143 (6%)

Query: 81  DRAVSRNLTVVAVKARRYMASQTKLE----EEILLKSSSHLNIVTLLGYPQDGLQRRCLV 136
             +       VA+K  +   S +  E    E + ++   H +IV L+G   +      ++
Sbjct: 28  YMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN--PVWII 85

Query: 137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD 196
            E    G LR  L+ +   LD    +  A Q+ +A   +         H +I + N+L+ 
Sbjct: 86  MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVS 142

Query: 197 ELCNAKLAGFGAANYCSGGSNRR 219
                KL  FG + Y    +  +
Sbjct: 143 SNDCVKLGDFGLSRYMEDSTYYK 165

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 2e-19
 Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 6/142 (4%)

Query: 82  RAVSRNLTVVAVKA--RRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
               R    VA+K      M+    +EE  ++ + SH  +V L G      +   ++ E+
Sbjct: 22  YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-RPIFIITEY 80

Query: 140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC 199
           M  G L   LRE       ++ L +   +  A   +         H ++ + N L+++  
Sbjct: 81  MANGCLLNYLREMRHRFQTQQLLEMCKDVCEA---MEYLESKQFLHRDLAARNCLVNDQG 137

Query: 200 NAKLAGFGAANYCSGGSNRRNC 221
             K++ FG + Y        + 
Sbjct: 138 VVKVSDFGLSRYVLDDEYTSSV 159

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 3e-19
 Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 8/143 (5%)

Query: 82  RAVSRNLTVVAVKA--RRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
                  T VAVK+  +  M+    L E  L+K   H  +V L            ++ E+
Sbjct: 31  MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEY 88

Query: 140 MQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
           M+ GSL   L+   G  L   K L +A QI  A  M  +  +    H ++ + NIL+ + 
Sbjct: 89  MENGSLVDFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEERN-YIHRDLRAANILVSDT 145

Query: 199 CNAKLAGFGAANYCSGGSNRRNC 221
            + K+A FG A            
Sbjct: 146 LSCKIADFGLARLIEDNEYTARE 168

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 4e-19
 Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 6/142 (4%)

Query: 82  RAVSRNLTVVAVKA--RRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
                N   VA+K      M+ +  +EE  ++   SH  +V L G   +     CLVFEF
Sbjct: 23  LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-APICLVFEF 81

Query: 140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC 199
           M+ G L   LR + G    E  L + L +      +    +  + H ++ + N L+ E  
Sbjct: 82  MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG---MAYLEEACVIHRDLAARNCLVGENQ 138

Query: 200 NAKLAGFGAANYCSGGSNRRNC 221
             K++ FG   +        + 
Sbjct: 139 VIKVSDFGMTRFVLDDQYTSST 160

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (204), Expect = 6e-19
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 7/135 (5%)

Query: 89  TVVAVK--ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
            + A K    +          EI +L S  H NIV LL           ++ EF   G++
Sbjct: 38  VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAV 96

Query: 146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
              + E   PL   +   +  Q    + +  ++    I H ++ + NIL     + KLA 
Sbjct: 97  DAVMLELERPLTESQIQVVCKQT--LDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLAD 153

Query: 206 FGAANYCSGGSNRRN 220
           FG +   +    RR+
Sbjct: 154 FGVSAKNTRTIQRRD 168

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 7e-19
 Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 7/141 (4%)

Query: 89  TVVAVKARRYMASQTKLE----EEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
              AVK+   +    ++     E I++K  SH N+++LLG          +V  +M+ G 
Sbjct: 56  IHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD 115

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
           LR  +R +      +  +   LQ+      +   +     H ++ + N +LDE    K+A
Sbjct: 116 LRNFIRNETHNPTVKDLIGFGLQVAKG---MKFLASKKFVHRDLAARNCMLDEKFTVKVA 172

Query: 205 GFGAANYCSGGSNRRNCEKTS 225
            FG A             KT 
Sbjct: 173 DFGLARDMYDKEFDSVHNKTG 193

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 2e-18
 Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 13/156 (8%)

Query: 82  RAVSRNLTVVAVKARRYMASQTKLEE-EIL-LKSSSHLNIVTLLGYPQDG---LQRRCLV 136
           R   R    VAVK       ++   E EI       H NI+  +           +  LV
Sbjct: 21  RGKWRG-EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79

Query: 137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSA-----NQMVCMYSKPPIYHGNITSD 191
            ++ + GSL   L      +  E  + +AL   S       ++V    KP I H ++ S 
Sbjct: 80  SDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137

Query: 192 NILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEM 227
           NIL+ +     +A  G A      ++  +      +
Sbjct: 138 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.3 bits (200), Expect = 2e-18
 Identities = 25/142 (17%), Positives = 58/142 (40%), Gaps = 8/142 (5%)

Query: 81  DRAVSRNLTVVAVKARRYMASQTKLEE---EI-LLKSSSHLNIVTLLGYPQDGLQRRCLV 136
            +   +    VA+K  +   ++ +  +   E  ++    H N++ L G          ++
Sbjct: 47  LKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKS-TPVMII 105

Query: 137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD 196
            EFM+ GSL   LR+  G     + + +   I +  + +         H ++ + NIL++
Sbjct: 106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVN 162

Query: 197 ELCNAKLAGFGAANYCSGGSNR 218
                K++ FG + +    ++ 
Sbjct: 163 SNLVCKVSDFGLSRFLEDDTSD 184

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.9 bits (199), Expect = 3e-18
 Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 7/136 (5%)

Query: 89  TVVAVKARRYMASQTK--LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLR 146
             VAVK  +    + +  L+E  ++K   H N+V LLG          ++ EFM  G+L 
Sbjct: 43  LTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNLL 101

Query: 147 WNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
             LRE     +     L +A QI SA + +    K    H ++ + N L+ E    K+A 
Sbjct: 102 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 158

Query: 206 FGAANYCSGGSNRRNC 221
           FG +   +G +   + 
Sbjct: 159 FGLSRLMTGDTYTAHA 174

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 79.7 bits (196), Expect = 1e-17
 Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 9/138 (6%)

Query: 89  TVVAVK--ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
              A K     + + +  + +EI  +    H  +V L    +D      +++EFM  G L
Sbjct: 52  NNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD-NEMVMIYEFMSGGEL 110

Query: 146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL--DELCNAKL 203
              + ++   +  ++ +    Q+      +C   +    H ++  +NI+         KL
Sbjct: 111 FEKVADEHNKMSEDEAVEYMRQVCKG---LCHMHENNYVHLDLKPENIMFTTKRSNELKL 167

Query: 204 AGFGAANYCSGGSNRRNC 221
             FG   +     + +  
Sbjct: 168 IDFGLTAHLDPKQSVKVT 185

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.9 bits (194), Expect = 2e-17
 Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 11/131 (8%)

Query: 89  TVVAVKARRYMASQTK-----LEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
            VVA+K   Y   Q+      + +E+  L+   H N +   G          LV E+   
Sbjct: 41  EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-HTAWLVMEYCLG 99

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
            +       K  PL   +  A+         +  ++S   + H ++ + NILL E    K
Sbjct: 100 SASDLLEVHKK-PLQEVEIAAVTHGALQG--LAYLHSHN-MIHRDVKAGNILLSEPGLVK 155

Query: 203 LAGFGAANYCS 213
           L  FG+A+  +
Sbjct: 156 LGDFGSASIMA 166

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 2e-17
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 8/143 (5%)

Query: 82  RAVSRNLTVVAVKA--RRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
                  T VA+K      M+ +  L+E  ++K   H  +V L     +      +V E+
Sbjct: 35  MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEY 92

Query: 140 MQRGSL-RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL 198
           M +GSL  +   E G  L   + + +A QI  A+ M  +       H ++ + NIL+ E 
Sbjct: 93  MSKGSLLDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVERMN-YVHRDLRAANILVGEN 149

Query: 199 CNAKLAGFGAANYCSGGSNRRNC 221
              K+A FG A            
Sbjct: 150 LVCKVADFGLARLIEDNEYTARQ 172

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 3e-17
 Identities = 34/171 (19%), Positives = 55/171 (32%), Gaps = 24/171 (14%)

Query: 79  KGDRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGYPQDGLQRR 133
           K            A+K  +  AS+        E E+L K   H NI+ LLG  +      
Sbjct: 28  KARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-GYL 86

Query: 134 CLVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIALQIDSANQMVCMY 178
            L  E+   G+L   LR+                   L  ++ L  A  +      +   
Sbjct: 87  YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS-- 144

Query: 179 SKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAE 229
            +    H ++ + NIL+ E   AK+A FG +        +           
Sbjct: 145 -QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 194

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 3e-17
 Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 11/143 (7%)

Query: 89  TVVAVK----ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRR-CLVFEFMQR 142
            ++  K         A +  L  E+ LL+   H NIV       D       +V E+ + 
Sbjct: 30  KILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 89

Query: 143 GSLRWNLREKG---GPLDWEKRLAIALQIDSANQMVCMYSK--PPIYHGNITSDNILLDE 197
           G L   + +       LD E  L +  Q+  A +     S     + H ++   N+ LD 
Sbjct: 90  GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG 149

Query: 198 LCNAKLAGFGAANYCSGGSNRRN 220
             N KL  FG A   +  ++   
Sbjct: 150 KQNVKLGDFGLARILNHDTSFAK 172

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 4e-17
 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 12/150 (8%)

Query: 82  RAVSRNLTV-VAVK----ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRR-- 133
           + +    TV VA       +   + + + +EE  +LK   H NIV      +  ++ +  
Sbjct: 27  KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 86

Query: 134 -CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
             LV E M  G+L+  L+ +   +  +   +   QI            PPI H ++  DN
Sbjct: 87  IVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKG-LQFLHTRTPPIIHRDLKCDN 144

Query: 193 ILL-DELCNAKLAGFGAANYCSGGSNRRNC 221
           I +     + K+   G A        +   
Sbjct: 145 IFITGPTGSVKIGDLGLATLKRASFAKAVI 174

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 77.8 bits (191), Expect = 6e-17
 Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 9/141 (6%)

Query: 89  TVVAVK--ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
            V   K     Y   +  ++ EI ++    H  ++ L    +D      L+ EF+  G L
Sbjct: 55  RVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK-YEMVLILEFLSGGEL 113

Query: 146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD--ELCNAKL 203
              +  +   +   + +    Q      +  M+    I H +I  +NI+ +  +  + K+
Sbjct: 114 FDRIAAEDYKMSEAEVINYMRQA--CEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKI 170

Query: 204 AGFGAANYCSGGSNRRNCEKT 224
             FG A   +     +    T
Sbjct: 171 IDFGLATKLNPDEIVKVTTAT 191

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 8e-17
 Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 11/139 (7%)

Query: 89  TVVAVKA--RRYMASQTKLE----EEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
              A+K   +R++  + K+     E  ++    H   V L    QD  ++      + + 
Sbjct: 34  REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD-EKLYFGLSYAKN 92

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G L   +R K G  D         +I SA + +       I H ++  +NILL+E  + +
Sbjct: 93  GELLKYIR-KIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQ 148

Query: 203 LAGFGAANYCSGGSNRRNC 221
           +  FG A   S  S +   
Sbjct: 149 ITDFGTAKVLSPESKQARA 167

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 1e-16
 Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 11/146 (7%)

Query: 89  TVVAVK------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
            ++A+K        +         E  +     H NI+ L GY  D   R  L+ E+   
Sbjct: 32  FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYLILEYAPL 90

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G++   L+ K    D ++      ++ +A  +   +SK  + H +I  +N+LL      K
Sbjct: 91  GTVYRELQ-KLSKFDEQRTATYITELANA--LSYCHSKR-VIHRDIKPENLLLGSAGELK 146

Query: 203 LAGFGAANYCSGGSNRRNCEKTSEMA 228
           +A FG + +         C     + 
Sbjct: 147 IADFGWSVHAPSSRRTTLCGTLDYLP 172

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 1e-16
 Identities = 38/160 (23%), Positives = 56/160 (35%), Gaps = 31/160 (19%)

Query: 89  TVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
             VAVK  +  A  ++      E +++ +  SH NIV LLG          L+FE+   G
Sbjct: 68  IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS-GPIYLIFEYCCYG 126

Query: 144 SLRWNLREKG----------------------GPLDWEKRLAIALQIDSANQMVCMYSKP 181
            L   LR K                         L +E  L  A Q+     M  +  K 
Sbjct: 127 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKG--MEFLEFKS 184

Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNC 221
              H ++ + N+L+      K+  FG A      SN    
Sbjct: 185 -CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 223

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 8/142 (5%)

Query: 90  VVAVKA-RRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
               K  +     Q  +++EI +L  + H NI+ L    +   +   ++FEF+    +  
Sbjct: 32  TYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM-EELVMIFEFISGLDIFE 90

Query: 148 NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD--ELCNAKLAG 205
            +      L+  + ++   Q+  A   +       I H +I  +NI+         K+  
Sbjct: 91  RINTSAFELNEREIVSYVHQVCEA---LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIE 147

Query: 206 FGAANYCSGGSNRRNCEKTSEM 227
           FG A     G N R      E 
Sbjct: 148 FGQARQLKPGDNFRLLFTAPEY 169

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 2e-16
 Identities = 29/151 (19%), Positives = 62/151 (41%), Gaps = 11/151 (7%)

Query: 79  KGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-----LKSSSHLNIVTLLGYPQDGLQRR 133
           KG   + + +  VAVK  +  A+   L++E+L     ++   +  IV ++G  +   +  
Sbjct: 25  KGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESW 82

Query: 134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNI 193
            LV E  + G L   L+ +   +  +  + +  Q+      +    +    H ++ + N+
Sbjct: 83  MLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMG---MKYLEESNFVHRDLAARNV 138

Query: 194 LLDELCNAKLAGFGAANYCSGGSNRRNCEKT 224
           LL     AK++ FG +       N    +  
Sbjct: 139 LLVTQHYAKISDFGLSKALRADENYYKAQTH 169

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 3e-16
 Identities = 32/144 (22%), Positives = 52/144 (36%), Gaps = 11/144 (7%)

Query: 81  DRAVSRNLTVVAVKA--RRYMASQTKLEE---EI-LLKSSSHLNIVTLLGYPQDGLQRRC 134
             A S     VAVK      ++    +++   E+  + S  H N++ L G          
Sbjct: 29  WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--PMK 86

Query: 135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL 194
           +V E    GSL   LR+  G          A+Q+     M  + SK    H ++ + N+L
Sbjct: 87  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG--MGYLESK-RFIHRDLAARNLL 143

Query: 195 LDELCNAKLAGFGAANYCSGGSNR 218
           L      K+  FG         + 
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDH 167

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 8e-16
 Identities = 27/139 (19%), Positives = 57/139 (41%), Gaps = 8/139 (5%)

Query: 86  RNLTVVAVKARRYMASQTKLEE---EI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ 141
           +    VA+K  +   ++ +  +   E  ++   SH NI+ L G      +   ++ E+M+
Sbjct: 34  KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY-KPMMIITEYME 92

Query: 142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
            G+L   LREK G     + + +   I +  + +         H ++ + NIL++     
Sbjct: 93  NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVC 149

Query: 202 KLAGFGAANYCSGGSNRRN 220
           K++ FG +           
Sbjct: 150 KVSDFGLSRVLEDDPEATY 168

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 2e-15
 Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 13/160 (8%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTL 122
           +FG   +GL + +G++        VA+K  R   S       L+E  ++ S  + ++  L
Sbjct: 21  AFGTVYKGLWIPEGEKVK----IPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76

Query: 123 LGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPP 182
           LG          L+ + M  G L   +RE    +  +  L   +QI      +       
Sbjct: 77  LGICLTS--TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RR 131

Query: 183 IYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCE 222
           + H ++ + N+L+    + K+  FG A          + E
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (178), Expect = 3e-15
 Identities = 28/151 (18%), Positives = 60/151 (39%), Gaps = 12/151 (7%)

Query: 89  TVVAVKARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR---CLVFEFMQRGSL 145
              A+K  +    + + E E+  ++S   +IV ++   ++    R    +V E +  G L
Sbjct: 38  EKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL 96

Query: 146 RWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN---A 201
              ++++G       +   I   I  A  +  ++S   I H ++  +N+L          
Sbjct: 97  FSRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSI-NIAHRDVKPENLLYTSKRPNAIL 153

Query: 202 KLAGFGAANYCSGGSNRRNCEKTSE-MAEDI 231
           KL  FG A   +  ++      T   +A ++
Sbjct: 154 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 184

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.2 bits (176), Expect = 4e-15
 Identities = 39/160 (24%), Positives = 58/160 (36%), Gaps = 31/160 (19%)

Query: 89  TVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           T+VAVK  +  AS         E  L+    + NIV LLG    G +  CL+FE+M  G 
Sbjct: 44  TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG-KPMCLLFEYMAYGD 102

Query: 145 LRWNLREKGG-----------------------PLDWEKRLAIALQIDSANQMVCMYSKP 181
           L   LR                           PL   ++L IA Q+ +    +      
Sbjct: 103 LNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--- 159

Query: 182 PIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNC 221
              H ++ + N L+ E    K+A FG +         +  
Sbjct: 160 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD 199

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 71.3 bits (174), Expect = 5e-15
 Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 18/153 (11%)

Query: 89  TVVAVK-------------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCL 135
              AVK               + +   T  E +IL K S H NI+ L    +       L
Sbjct: 29  KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN-TFFFL 87

Query: 136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL 195
           VF+ M++G L   L EK   L  ++   I   +     +  ++    I H ++  +NILL
Sbjct: 88  VFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEV--ICALHKLN-IVHRDLKPENILL 143

Query: 196 DELCNAKLAGFGAANYCSGGSNRRNCEKTSEMA 228
           D+  N KL  FG +     G   R    T    
Sbjct: 144 DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 176

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 8e-15
 Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 17/148 (11%)

Query: 89  TVVAVKARRYMASQTK----LEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
           T VA+K     AS  +    L E  ++K  +  ++V LLG    G Q   ++ E M RG 
Sbjct: 51  TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-QPTLVIMELMTRGD 109

Query: 145 LRWNLREKGG---------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL 195
           L+  LR             P    K + +A +I      +   +     H ++ + N ++
Sbjct: 110 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG---MAYLNANKFVHRDLAARNCMV 166

Query: 196 DELCNAKLAGFGAANYCSGGSNRRNCEK 223
            E    K+  FG           R   K
Sbjct: 167 AEDFTVKIGDFGMTRDIYETDYYRKGGK 194

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 9e-15
 Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 26/155 (16%)

Query: 89  TVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
             VAVK  +  A  T+      E ++L    +H+NIV LLG    G     ++ E+   G
Sbjct: 54  MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYG 112

Query: 144 SLRWNLREKG-----------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHG 186
            L   LR K                    LD E  L+ + Q+  A  M  + SK  I H 
Sbjct: 113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV--AKGMAFLASKNCI-HR 169

Query: 187 NITSDNILLDELCNAKLAGFGAANYCSGGSNRRNC 221
           ++ + NILL      K+  FG A      SN    
Sbjct: 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 1e-14
 Identities = 38/175 (21%), Positives = 67/175 (38%), Gaps = 25/175 (14%)

Query: 67  SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVT 121
           +FG  V     I  D+     +T VAVK  +  A++  L     E E++     H NI+ 
Sbjct: 25  AFG-QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 83

Query: 122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGP---------------LDWEKRLAIAL 166
           LLG          ++ E+  +G+LR  L+ +  P               L  +  ++ A 
Sbjct: 84  LLGACTQD-GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY 142

Query: 167 QIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNC 221
           Q+    + +         H ++ + N+L+ E    K+A FG A         +  
Sbjct: 143 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 1e-14
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 90  VVAVK-------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
             A+K               T +E+ +L  +  H  +  +    Q   +    V E++  
Sbjct: 29  FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK-ENLFFVMEYLNG 87

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G L ++++      D  +    A +I      +       I + ++  DNILLD+  + K
Sbjct: 88  GDLMYHIQSC-HKFDLSRATFYAAEIILG---LQFLHSKGIVYRDLKLDNILLDKDGHIK 143

Query: 203 LAGFGAANYCSGGSNRRNC 221
           +A FG       G  + N 
Sbjct: 144 IADFGMCKENMLGDAKTNT 162

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 1e-14
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 89  TVVAVK----ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGS 144
             VAVK     R     +   +E  + K  +H N+V   G+ ++G   + L  E+   G 
Sbjct: 31  EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-NIQYLFLEYCSGGE 89

Query: 145 LRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA 204
           L   +    G +          Q+ +   +V ++      H +I  +N+LLDE  N K++
Sbjct: 90  LFDRIEPDIG-MPEPDAQRFFHQLMAG--VVYLHGIGIT-HRDIKPENLLLDERDNLKIS 145

Query: 205 GFGAANYCSGGSNRRNC 221
            FG A      +  R  
Sbjct: 146 DFGLATVFRYNNRERLL 162

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.1 bits (171), Expect = 2e-14
 Identities = 29/139 (20%), Positives = 47/139 (33%), Gaps = 6/139 (4%)

Query: 90  VVAVK---ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSL 145
           +VA+K    +     +  +E EI +L    H NIV L    + G     L+ + +  G L
Sbjct: 36  LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG-GHLYLIMQLVSGGEL 94

Query: 146 RWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG 205
              + EK G         +  Q+  A + +                   LDE     ++ 
Sbjct: 95  FDRIVEK-GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 153

Query: 206 FGAANYCSGGSNRRNCEKT 224
           FG +     GS       T
Sbjct: 154 FGLSKMEDPGSVLSTACGT 172

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 2e-14
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 19/181 (10%)

Query: 58  ILKRRRMLKSFGDSVEGLTLIK--GD-------RAVSRNL-TVVAVK--ARRYMASQTKL 105
           IL++ R + S GD  +  T  +  G         A+       VA++    +    +  +
Sbjct: 5   ILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 64

Query: 106 EEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAI 164
             EI +++ + + NIV  L     G     +V E++  GSL   + E        +  A+
Sbjct: 65  INEILVMRENKNPNIVNYLDSYLVG-DELWVVMEYLAGGSLTDVVTETCMD--EGQIAAV 121

Query: 165 ALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSNRRNCEKT 224
             +   A  +  ++S   + H +I SDNILL    + KL  FG     +   ++R+    
Sbjct: 122 CRECLQA--LEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178

Query: 225 S 225
           +
Sbjct: 179 T 179

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 6e-14
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 23/151 (15%)

Query: 87  NLTVVAVKARRYMASQTKL-----EEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQ 141
               VAVK  +  A+ ++      E +IL+    HLN+V LLG          ++ EF +
Sbjct: 42  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 101

Query: 142 RGSLRWNLREKGG---------------PLDWEKRLAIALQIDSANQMVCMYSKPPIYHG 186
            G+L   LR K                  L  E  +  + Q+     M  + S+    H 
Sbjct: 102 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG--MEFLASR-KCIHR 158

Query: 187 NITSDNILLDELCNAKLAGFGAANYCSGGSN 217
           ++ + NILL E    K+  FG A       +
Sbjct: 159 DLAARNILLSEKNVVKICDFGLARDIYKDPD 189

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 65.9 bits (160), Expect = 7e-13
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 14/142 (9%)

Query: 89  TVVAVK------ARRYMASQTKLEEEI---LLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
            + A+K       +        L E I   L+ +     IV +         +   + + 
Sbjct: 30  KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP-DKLSFILDL 88

Query: 140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC 199
           M  G L ++L  + G          A +I    + +       + + ++   NILLDE  
Sbjct: 89  MNGGDLHYHLS-QHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHG 144

Query: 200 NAKLAGFGAANYCSGGSNRRNC 221
           + +++  G A   S      + 
Sbjct: 145 HVRISDLGLACDFSKKKPHASV 166

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 8e-13
 Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 16/155 (10%)

Query: 89  TVVAVK----------ARRYMASQTKLEEEILLK-SSSHLNIVTLLGYPQDGLQRRCLVF 137
             VA+K                ++  +E  +L K SS    ++ LL + +       L+ 
Sbjct: 30  LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP-DSFVLIL 88

Query: 138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD- 196
           E  +     ++   + G L  E   +   Q+  A   V       + H +I  +NIL+D 
Sbjct: 89  ERPEPVQDLFDFITERGALQEELARSFFWQVLEA---VRHCHNCGVLHRDIKDENILIDL 145

Query: 197 ELCNAKLAGFGAANYCSGGSNRRNCEKTSEMAEDI 231
                KL  FG+                     + 
Sbjct: 146 NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 1e-12
 Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 13/141 (9%)

Query: 89  TVVAVK--------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFM 140
            +VA+K          +   ++T L E  LL+  SH NI+ LL           LVF+FM
Sbjct: 24  QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK-SNISLVFDFM 82

Query: 141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN 200
           +       +++    L      A  L        +    +  I H ++  +N+LLDE   
Sbjct: 83  ETDLEVI-IKDNSLVLTPSHIKAYMLMTLQG---LEYLHQHWILHRDLKPNNLLLDENGV 138

Query: 201 AKLAGFGAANYCSGGSNRRNC 221
            KLA FG A      +     
Sbjct: 139 LKLADFGLAKSFGSPNRAYTH 159

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 3e-12
 Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 16/151 (10%)

Query: 89  TVVAVK-----ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR-------CLV 136
             VA+K       +     T L E  +L+   H N+V L+   +              LV
Sbjct: 36  QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 95

Query: 137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD 196
           F+F +                  +   +   + +    +    +  I H ++ + N+L+ 
Sbjct: 96  FDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNG---LYYIHRNKILHRDMKAANVLIT 151

Query: 197 ELCNAKLAGFGAANYCSGGSNRRNCEKTSEM 227
                KLA FG A   S   N +    T+ +
Sbjct: 152 RDGVLKLADFGLARAFSLAKNSQPNRYTNRV 182

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.6 bits (154), Expect = 4e-12
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 11/131 (8%)

Query: 89  TVVAVK------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
              A+K        R    +   +E ++L   +H  I+ + G  QD  Q+  ++ ++++ 
Sbjct: 30  RYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA-QQIFMIMDYIE- 87

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G   ++L  K            A ++      +       I + ++  +NILLD+  + K
Sbjct: 88  GGELFSLLRKSQRFPNPVAKFYAAEV---CLALEYLHSKDIIYRDLKPENILLDKNGHIK 144

Query: 203 LAGFGAANYCS 213
           +  FG A Y  
Sbjct: 145 ITDFGFAKYVP 155

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 63.0 bits (152), Expect = 4e-12
 Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 12/157 (7%)

Query: 82  RAVSRNLTVVAVKARRYMASQTKLEEEIL-----LKSSSHLNIVTLLGYPQDGLQRRCLV 136
           +A +      A+K  R       +    +     LK   H NIV L        +R  LV
Sbjct: 20  KAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK-KRLVLV 78

Query: 137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD 196
           FE +    L+  L    G L+     +  LQ+ +    +       + H ++   N+L++
Sbjct: 79  FEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNG---IAYCHDRRVLHRDLKPQNLLIN 134

Query: 197 ELCNAKLAGFGAANYCSGGSNRRN--CEKTSEMAEDI 231
                K+A FG A        +           A D+
Sbjct: 135 REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 62.8 bits (152), Expect = 5e-12
 Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 13/145 (8%)

Query: 89  TVVAVKARRYMASQTK-----LEEEI-LLKSSSHLNIVTLLGYPQD---GLQRRCLVFEF 139
             VAVK  R   ++          E     + +H  IV +    +          +V E+
Sbjct: 33  RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 92

Query: 140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC 199
           +   +LR  +    GP+  ++ + +      A   +    +  I H ++   NI++    
Sbjct: 93  VDGVTLRDIVH-TEGPMTPKRAIEVIADACQA---LNFSHQNGIIHRDVKPANIMISATN 148

Query: 200 NAKLAGFGAANYCSGGSNRRNCEKT 224
             K+  FG A   +   N       
Sbjct: 149 AVKVMDFGIARAIADSGNSVTQTAA 173

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 8e-12
 Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 19/157 (12%)

Query: 89  TVVAVK--------ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEF 139
              A K        + R   S+  +E E+ +LK   H N++TL    ++      L+ E 
Sbjct: 36  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK-TDVILILEL 94

Query: 140 MQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-- 197
           +  G L   L EK   L  E+      QI +    V       I H ++  +NI+L +  
Sbjct: 95  VAGGELFDFLAEK-ESLTEEEATEFLKQILNG---VYYLHSLQIAHFDLKPENIMLLDRN 150

Query: 198 --LCNAKLAGFGAANYCSGGSNRRNCEKTSE-MAEDI 231
                 K+  FG A+    G+  +N   T E +A +I
Sbjct: 151 VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 1e-11
 Identities = 24/139 (17%), Positives = 54/139 (38%), Gaps = 11/139 (7%)

Query: 89  TVVAVKA--RRYMASQTKLEEEI----LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
              A+K   +  + ++ ++   +    +L+++ H  +  L    Q    R C V E+   
Sbjct: 31  RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-DRLCFVMEYANG 89

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G L ++L  +      E+      +I SA + +       + + +I  +N++LD+  + K
Sbjct: 90  GELFFHLS-RERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIK 145

Query: 203 LAGFGAANYCSGGSNRRNC 221
           +  FG              
Sbjct: 146 ITDFGLCKEGISDGATMKT 164

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 2e-11
 Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 14/144 (9%)

Query: 89  TVVAVKARRYMASQTKLEE---EI-LLKSSSHLNIVTLLGYPQDG----LQRRCLVFEFM 140
             VA+K       QT  +    EI +L    H NI+ +    +      ++   LV   M
Sbjct: 34  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM 93

Query: 141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN 200
                +     K   L  +       QI      +       + H ++   N+LL+  C+
Sbjct: 94  GADLYKL---LKTQHLSNDHICYFLYQILRG---LKYIHSANVLHRDLKPSNLLLNTTCD 147

Query: 201 AKLAGFGAANYCSGGSNRRNCEKT 224
            K+  FG A       +       
Sbjct: 148 LKICDFGLARVADPDHDHTGFLTE 171

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 1e-10
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 14/142 (9%)

Query: 89  TVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRR-----CLVFEFMQR 142
            +VA+K  + +  +     E+ +++   H NIV L  +     +++      LV +++  
Sbjct: 46  ELVAIK--KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103

Query: 143 GSLRW--NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELC 199
              R   +       L          Q+  +  +  ++S   I H +I   N+LLD +  
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS--LAYIHSF-GICHRDIKPQNLLLDPDTA 160

Query: 200 NAKLAGFGAANYCSGGSNRRNC 221
             KL  FG+A     G    + 
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSY 182

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 2e-10
 Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 15/137 (10%)

Query: 89  TVVAVK------ARRYMASQTKLEEEIL--LKSSSHLNIVTLLGYPQDGLQRR----CLV 136
             VA+K          M   T  E  +L  L++  H N+V L          R     LV
Sbjct: 34  RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV 93

Query: 137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD 196
           FE + +    +  +     +  E    +  Q+     +  ++S   + H ++   NIL+ 
Sbjct: 94  FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG--LDFLHSHR-VVHRDLKPQNILVT 150

Query: 197 ELCNAKLAGFGAANYCS 213
                KLA FG A   S
Sbjct: 151 SSGQIKLADFGLARIYS 167

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 57.9 bits (139), Expect = 3e-10
 Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 10/138 (7%)

Query: 90  VVAVKA-RRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRR-CLVFEFMQRGSLRW 147
            V VK  +     + K E +IL       NI+TL    +D + R   LVFE +       
Sbjct: 62  KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD--- 118

Query: 148 NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAKLAGF 206
             ++    L          +I  A   +       I H ++   N+++D E    +L  +
Sbjct: 119 -FKQLYQTLTDYDIRFYMYEILKA---LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW 174

Query: 207 GAANYCSGGSNRRNCEKT 224
           G A +   G        +
Sbjct: 175 GLAEFYHPGQEYNVRVAS 192

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-09
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 13/141 (9%)

Query: 89  TVVAVK--------ARRYMASQTKLEEEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFM 140
            + A+K         +      T+ E ++L        +VTL    Q    +  L+ +++
Sbjct: 53  KLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE-TKLHLILDYI 111

Query: 141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCN 200
             G L  +L ++    + E ++ +  +I  A   +    K  I + +I  +NILLD   +
Sbjct: 112 NGGELFTHLSQRERFTEHEVQIYVG-EIVLA---LEHLHKLGIIYRDIKLENILLDSNGH 167

Query: 201 AKLAGFGAANYCSGGSNRRNC 221
             L  FG +         R  
Sbjct: 168 VVLTDFGLSKEFVADETERAY 188

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 2e-09
 Identities = 30/138 (21%), Positives = 47/138 (34%), Gaps = 10/138 (7%)

Query: 89  TVVAVKARRYMASQTKLEEEIL-----LKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRG 143
            +VA+K  R       +    L     LK   H NIV L        ++  LVFEF  + 
Sbjct: 28  EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-KKLTLVFEFCDQD 86

Query: 144 SLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKL 203
             ++     G   D E   +   Q+              + H ++   N+L++     KL
Sbjct: 87  LKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKL 142

Query: 204 AGFGAANYCSGGSNRRNC 221
           A FG A          + 
Sbjct: 143 ANFGLARAFGIPVRCYSA 160

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 55.2 bits (132), Expect = 2e-09
 Identities = 20/138 (14%), Positives = 42/138 (30%), Gaps = 10/138 (7%)

Query: 89  TVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
             VA+K     +   +L +E    K  +    +  + Y         LV + +       
Sbjct: 31  QQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDL 90

Query: 148 NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-----NAK 202
            L   G     +     A Q+ +    V    +  + + +I  DN L+            
Sbjct: 91  -LDLCGRKFSVKTVAMAAKQMLAR---VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIY 146

Query: 203 LAGFGAANYCSGGSNRRN 220
           +  FG   +      +++
Sbjct: 147 VVDFGMVKFYRDPVTKQH 164

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.2 bits (132), Expect = 2e-09
 Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 11/132 (8%)

Query: 89  TVVAVK--ARRYMASQTKLE----EEILLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQR 142
              A+K   ++ +    ++E    E+ +L++ +   +V L    +D       V E++  
Sbjct: 67  NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAG 125

Query: 143 GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAK 202
           G +  +LR  G           A QI        ++S   + + ++  +N+L+D+    +
Sbjct: 126 GEMFSHLRRIG-RFSEPHARFYAAQI--VLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQ 181

Query: 203 LAGFGAANYCSG 214
           +  FG A    G
Sbjct: 182 VTDFGFAKRVKG 193

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.1 bits (124), Expect = 2e-08
 Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 8/137 (5%)

Query: 89  TVVAVKARRYMASQTKLEEEI-LLKSSSHLNIVTLLGYPQDGLQRRCLVFEFMQRGSLRW 147
             VA+K         +L  E  + K       +  + +         +V E +   SL  
Sbjct: 33  EEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLED 91

Query: 148 NLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL---LDELCNAKLA 204
                      +  L +A Q+ S   +  ++SK    H ++  DN L     +     + 
Sbjct: 92  LFNFCSRKFSLKTVLLLADQMISR--IEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYII 148

Query: 205 GFGAANYCSGGSNRRNC 221
            FG A         ++ 
Sbjct: 149 DFGLAKKYRDARTHQHI 165

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 6e-06
 Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 10/148 (6%)

Query: 89  TVVAVK----ARRYMASQTKLEEEI-LLKSSSHLNIVTLLGY--PQDGLQRRCLVFEFMQ 141
             VAVK      + +    +   E+ LLK   H N++ LL    P   L+    V+    
Sbjct: 44  LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 103

Query: 142 RGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA 201
                 N   K   L  +    +  QI      +       I H ++   N+ ++E C  
Sbjct: 104 LMGADLNNIVKCQKLTDDHVQFLIYQILRG---LKYIHSADIIHRDLKPSNLAVNEDCEL 160

Query: 202 KLAGFGAANYCSGGSNRRNCEKTSEMAE 229
           K+  FG A +           +     E
Sbjct: 161 KILDFGLARHTDDEMTGYVATRWYRAPE 188

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (95), Expect = 1e-04
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 24/145 (16%)

Query: 89  TVVAVK---ARRYMASQTKLEEEIL----------LKSSSHLNIVTLLGYPQDGLQRR-- 133
           T VA+K     +      + E ++L            S    +I+ LL +          
Sbjct: 39  THVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVH 98

Query: 134 -CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDN 192
             +VFE +    L    + +   +       I+ Q+     +  M+ +  I H +I  +N
Sbjct: 99  VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG--LDYMHRRCGIIHTDIKPEN 156

Query: 193 ILLDE------LCNAKLAGFGAANY 211
           +L++       L   K+A  G A +
Sbjct: 157 VLMEIVDSPENLIQIKIADLGNACW 181

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	304
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.88
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.48
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.94
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.82
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.82
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.75
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.79

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.6e-46  Score=325.07  Aligned_cols=228  Identities=15%  Similarity=0.194  Sum_probs=174.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.++........||||.+.......   .|.+|+. |++++|||||+++|++...+. +++
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~-~~i  104 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP-VMI  104 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS-CEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE-EEE
Confidence            57888999999999999999987554445679999987654433   6778888 999999999999999988755 499


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      |||||++|+|.+++....+.+++.++..++.|++.||+|||+.   +|+||||||+|||++.++++||+|||+|+.....
T Consensus       105 v~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  181 (299)
T d1jpaa_         105 ITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD  181 (299)
T ss_dssp             EEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEccCC
Confidence            9999999999999988766899999999999999999999764   8999999999999999999999999999877543


Q ss_pred             CC----C---ccccc----------Ccccc--ccccc--------C----CCCc-----c---eeccccCCCCCCcchHH
Q 046594          216 SN----R---RNCEK----------TSEMA--EDIND--------F----VGGQ-----E---CLDQRLYIPNEKFKITS  256 (304)
Q Consensus       216 ~~----~---~~~~~----------~~~~s--~DV~S--------~----~~~~-----~---~~~~~~~~~~~~~~~~~  256 (304)
                      ..    .   ...++          .+.++  +||||        .    .+..     +   .+....   +...+.++
T Consensus       182 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~  258 (299)
T d1jpaa_         182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY---RLPPPMDC  258 (299)
T ss_dssp             --------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC---CCCCCTTC
T ss_pred             CCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCccc
Confidence            32    1   11122          23333  99999        1    1111     1   112222   34456677


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                      +..+.+|+.+||+     .||++|||+.||++.|+++.+.+++
T Consensus       259 ~~~l~~li~~cl~-----~~P~~RPs~~ei~~~L~~~l~~p~s  296 (299)
T d1jpaa_         259 PSALHQLMLDCWQ-----KDRNHRPKFGQIVNTLDKMIRNPNS  296 (299)
T ss_dssp             CHHHHHHHHHHTC-----SSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHcC-----CCHhHCcCHHHHHHHHHHHhcChhh
Confidence            8899999999999     9999999999999999999887654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-46  Score=321.10  Aligned_cols=221  Identities=22%  Similarity=0.242  Sum_probs=172.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+|++.+.||+|+||.||++.++    +++.||||+++...... .+.+|+. +++++||||++++|+|...+.. ++||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~-~lv~   79 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-CLVF   79 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET----TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC-EEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC----CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCce-EEEE
Confidence            36889999999999999999864    56789999998655443 7788888 9999999999999999887555 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN  217 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~  217 (304)
                      ||+++|+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        80 E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  156 (263)
T d1sm2a_          80 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  156 (263)
T ss_dssp             ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC----------
T ss_pred             EecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCc
Confidence            99999999999987766899999999999999999999765   799999999999999999999999999987754433


Q ss_pred             ---Cccccc----------Ccccc--ccccc------------CCCCc--------ceeccccCCCCCCcchHHHHHHHH
Q 046594          218 ---RRNCEK----------TSEMA--EDIND------------FVGGQ--------ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       218 ---~~~~~~----------~~~~s--~DV~S------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                         ....++          ...++  +||||            .+...        ..+....   +...|..+++++.+
T Consensus       157 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~---~~~~p~~~~~~l~~  233 (263)
T d1sm2a_         157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQ  233 (263)
T ss_dssp             --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTC---CCCCCTTSCHHHHH
T ss_pred             eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcC---CCCCccccCHHHHH
Confidence               122222          23333  89999            11111        1111222   34456667789999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      ++.+||+     .||++||||+|++++|+++++.
T Consensus       234 li~~cl~-----~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         234 IMNHCWK-----ERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHHHHTC-----SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcc-----CCHhHCcCHHHHHHHHHHHHhC
Confidence            9999999     9999999999999999999763

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.7e-46  Score=322.01  Aligned_cols=221  Identities=21%  Similarity=0.205  Sum_probs=180.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+|++.+.||+|+||.||++.++.   +++.||||+++...... .+.+|+. |++++|||||+++|+|.+++.. ++||
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~-~iv~   92 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF-YIIT   92 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGG---GTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC-EEEE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECC---CCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCee-EEEe
Confidence            478889999999999999999863   46899999997655443 7778888 9999999999999999887555 9999


Q ss_pred             eecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|.+++.... ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+......
T Consensus        93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~  169 (287)
T d1opja_          93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  169 (287)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred             ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence            9999999999997653 3899999999999999999999765   89999999999999999999999999999876544


Q ss_pred             C---Cccccc----------Ccccc--ccccc------------CC---CCc-----ceeccccCCCCCCcchHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND------------FV---GGQ-----ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S------------~~---~~~-----~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .   ....++          .+.++  +||||            .+   ...     +.+....   +.+.+..++..+.
T Consensus       170 ~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~  246 (287)
T d1opja_         170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY---RMERPEGCPEKVY  246 (287)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC---CCCCCTTCCHHHH
T ss_pred             ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCC---CCCCCccchHHHH
Confidence            3   222222          23333  99999            11   111     2333333   4556677888999


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +|+.+||+     .||++|||+.|+++.|+.+.+
T Consensus       247 ~li~~cl~-----~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         247 ELMRACWQ-----WNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             HHHHHHTC-----SSGGGSCCHHHHHHHHHHTTS
T ss_pred             HHHHHHcC-----CCHhHCcCHHHHHHHHHHHHH
Confidence            99999999     999999999999999998754

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-45  Score=313.85  Aligned_cols=220  Identities=18%  Similarity=0.237  Sum_probs=170.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++.+.||+|+||.||++.++      ..||||+++.....    ..|.+|+. +++++|||||+++|++.++  .++
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~------~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~--~~~   79 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWH------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP--QLA   79 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESS------SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--SCE
T ss_pred             ccEEEEEEEeeCCCcEEEEEEEC------CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEecc--EEE
Confidence            46889999999999999999764      35999998754322    27778888 9999999999999987653  359


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++...+..+++..+..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+|+....
T Consensus        80 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~  156 (276)
T d1uwha_          80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR  156 (276)
T ss_dssp             EEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred             EEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence            99999999999999987766899999999999999999999764   899999999999999999999999999987654


Q ss_pred             CCC----Cccccc-------------Ccccc--ccccc--------------CCCCc------ceeccccCC-CCCCcch
Q 046594          215 GSN----RRNCEK-------------TSEMA--EDIND--------------FVGGQ------ECLDQRLYI-PNEKFKI  254 (304)
Q Consensus       215 ~~~----~~~~~~-------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~-~~~~~~~  254 (304)
                      ...    ....++             .+.++  +||||              |....      ..+...... .....+.
T Consensus       157 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  236 (276)
T d1uwha_         157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS  236 (276)
T ss_dssp             ---------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCT
T ss_pred             cCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccc
Confidence            322    122222             12234  89999              22111      111111100 0123456


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      .+++.+.+|+.+||+     .||++|||+.|++++|+.+.+
T Consensus       237 ~~~~~l~~li~~cl~-----~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         237 NCPKAMKRLMAECLK-----KKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             TCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHcC-----CCHhHCcCHHHHHHHHHHHHH
Confidence            677899999999999     999999999999999999976

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-45  Score=315.15  Aligned_cols=215  Identities=18%  Similarity=0.186  Sum_probs=169.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||||+++.....+   .+.+|+. +++++||||+++++++.++ +.+|
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~-~~~~   79 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-NIQY   79 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEET-TEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-ceeE
Confidence            468999999999999999999986   357999999987654332   6777888 9999999999999999988 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+|+....
T Consensus        80 ivmEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~  155 (271)
T d1nvra_          80 LFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY  155 (271)
T ss_dssp             EEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             EEEeccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeecc
Confidence            9999999999999997665 799999999999999999999764   899999999999999999999999999987643


Q ss_pred             CCC----Cccccc-----------Ccccc--ccccc--------------CCCCc-------ceeccccCCCCCCcchHH
Q 046594          215 GSN----RRNCEK-----------TSEMA--EDIND--------------FVGGQ-------ECLDQRLYIPNEKFKITS  256 (304)
Q Consensus       215 ~~~----~~~~~~-----------~~~~s--~DV~S--------------~~~~~-------~~~~~~~~~~~~~~~~~~  256 (304)
                      ...    ....|+           ..+.+  +||||              |....       .......   ........
T Consensus       156 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~  232 (271)
T d1nvra_         156 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT---YLNPWKKI  232 (271)
T ss_dssp             TTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT---TSTTGGGS
T ss_pred             CCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC---CCCccccC
Confidence            321    223344           22223  89999              21111       0111111   12223455


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          257 LAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       257 ~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +..+.+|+.+||+     .||++|||+.|+++|
T Consensus       233 s~~~~~li~~~L~-----~dP~~R~t~~eil~h  260 (271)
T d1nvra_         233 DSAPLALLHKILV-----ENPSARITIPDIKKD  260 (271)
T ss_dssp             CHHHHHHHHHHSC-----SSTTTSCCHHHHTTC
T ss_pred             CHHHHHHHHHHcC-----CChhHCcCHHHHhcC
Confidence            7888999999999     999999999999874

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-44  Score=314.11  Aligned_cols=214  Identities=20%  Similarity=0.217  Sum_probs=172.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch--hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +||++.+.||+|+||.||++.++   .+|+.||||+++.....  +.+.+|+. +++++||||+++++++.+.+ .+|+|
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~---~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-~~~iv   95 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDV---ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-ELWVV   95 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBT---TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-EEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEEC---CCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECC-EEEEE
Confidence            47999999999999999999986   45799999998754432  36777778 99999999999999999884 45999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||||++|+|.+++...  .+++.++..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+|+......
T Consensus        96 mEy~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~  170 (293)
T d1yhwa1          96 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (293)
T ss_dssp             EECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence            9999999999988764  699999999999999999999764   89999999999999999999999999999875443


Q ss_pred             C--Cccccc----------Ccccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHHHHHH
Q 046594          217 N--RRNCEK----------TSEMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       217 ~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .  ....|+          ...++  +||||              |....  +    +.....  +....+...+..+.+
T Consensus       171 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~  248 (293)
T d1yhwa1         171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT--PELQNPEKLSAIFRD  248 (293)
T ss_dssp             CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS--CCCSSGGGSCHHHHH
T ss_pred             ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC--CCCCCcccCCHHHHH
Confidence            3  333344          22233  99999              22222  1    111111  123455667889999


Q ss_pred             HHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      |+.+||+     .||++|||+.|+++|
T Consensus       249 li~~~L~-----~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         249 FLNRCLD-----MDVEKRGSAKELLQH  270 (293)
T ss_dssp             HHHHHTC-----SSTTTSCCHHHHTTC
T ss_pred             HHHHHcc-----CChhHCcCHHHHhcC
Confidence            9999999     999999999999875

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=312.21  Aligned_cols=218  Identities=20%  Similarity=0.211  Sum_probs=174.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+|++.+.||+|+||.||++.++    ++..||||+++...... .+.+|+. +++++|||||+++|++.++ . +++||
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-~-~~iv~   86 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-P-IYIIT   86 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-S-CEEEE
T ss_pred             HHeEEeEEEecCCCcEEEEEEEC----CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccC-C-eEEEE
Confidence            57889999999999999999864    46789999998654433 7788888 9999999999999988653 4 49999


Q ss_pred             eecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|.+++..... ++++..++.++.|+++||+|||+.   +|+||||||+||||+.++.+||+|||+|+......
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCc
Confidence            99999999998765543 699999999999999999999764   89999999999999999999999999999876543


Q ss_pred             C---Cccccc----------Ccccc--ccccc------------CCCCc-----c---eeccccCCCCCCcchHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND------------FVGGQ-----E---CLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S------------~~~~~-----~---~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .   ....++          .+.++  +||||            .+...     +   .+....   +...|..++..+.
T Consensus       164 ~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~---~~~~p~~~~~~l~  240 (272)
T d1qpca_         164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY---RMVRPDNCPEELY  240 (272)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTCCHHHH
T ss_pred             cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC---CCCCcccChHHHH
Confidence            3   222333          22333  89999            11111     1   111222   3445566778899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVK  294 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~  294 (304)
                      +|+.+||+     .||++||||.+|++.|+.+-
T Consensus       241 ~li~~cl~-----~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         241 QLMRLCWK-----ERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             HHHHHHTC-----SSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcC-----CCHhHCcCHHHHHHHhhhhh
Confidence            99999999     99999999999999998764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-45  Score=313.10  Aligned_cols=217  Identities=18%  Similarity=0.242  Sum_probs=175.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +.+|++.+.||+|+||.||++.++   .+++.||+|++.....     ...+.+|+. +++++||||+++++++.+. +.
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-~~   80 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR   80 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-SE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEEC---CCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEEC-CE
Confidence            468999999999999999999986   3579999999864332     226777888 9999999999999999987 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+|||||++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+..
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~  156 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA  156 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCC
T ss_pred             EEEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeec
Confidence            599999999999999998776 799999999999999999999764   8999999999999999999999999999887


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      .........|+          ...++  +||||              |....  +...... .....+|...++.+.+++
T Consensus       157 ~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li  235 (263)
T d2j4za1         157 PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-RVEFTFPDFVTEGARDLI  235 (263)
T ss_dssp             CCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-TTCCCCCTTSCHHHHHHH
T ss_pred             CCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCccCCHHHHHHH
Confidence            66554333444          22223  99999              22221  1111111 112345666778999999


Q ss_pred             HHhccccCCCCCCCCCCCHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+||+     .||++|||+.|+++|
T Consensus       236 ~~~L~-----~dp~~R~t~~eil~h  255 (263)
T d2j4za1         236 SRLLK-----HNPSQRPMLREVLEH  255 (263)
T ss_dssp             HHHTC-----SSGGGSCCHHHHHTC
T ss_pred             HHHcc-----CCHhHCcCHHHHHcC
Confidence            99999     999999999999875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-44  Score=309.30  Aligned_cols=228  Identities=17%  Similarity=0.169  Sum_probs=175.9

Q ss_pred             hhccccccCCccccceeeecceeecC-CCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .|++.+.||+|+||.||++.++.... ....||||+++......   .|.+|+. +++++|||||+++|++.+.+.. ++
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~-~~   86 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM-MI   86 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE-EE
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCce-EE
Confidence            57888999999999999998875421 22579999997654433   6777777 9999999999999999887554 99


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+.+|++.+.+......+++.++..++.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++.....
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCC
Confidence            9999999999998887776899999999999999999999764   8999999999999999999999999999876543


Q ss_pred             CC-----Cccccc----------Ccccc--ccccc------------CCCCc--------ceeccccCCCCCCcchHHHH
Q 046594          216 SN-----RRNCEK----------TSEMA--EDIND------------FVGGQ--------ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       216 ~~-----~~~~~~----------~~~~s--~DV~S------------~~~~~--------~~~~~~~~~~~~~~~~~~~~  258 (304)
                      ..     ....++          .+.++  +||||            .+...        ..+....   +...+.+++.
T Consensus       164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~  240 (283)
T d1mqba_         164 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF---RLPTPMDCPS  240 (283)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC---CCCCCTTCBH
T ss_pred             CccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccC---CCCCchhhHH
Confidence            22     112222          22333  99999            11111        1222333   4456677788


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhccc
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSSV  300 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~~  300 (304)
                      .+.+|+.+||+     .||++||||.||++.|+++.+.+++.
T Consensus       241 ~l~~li~~cl~-----~~p~~RPt~~eil~~L~~l~~~p~~l  277 (283)
T d1mqba_         241 AIYQLMMQCWQ-----QERARRPKFADIVSILDKLIRAPDSL  277 (283)
T ss_dssp             HHHHHHHHHTC-----SSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred             HHHHHHHHHCc-----CCHhHCcCHHHHHHHHHHHhhCcccc
Confidence            99999999999     99999999999999999998876653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-43  Score=307.99  Aligned_cols=221  Identities=16%  Similarity=0.134  Sum_probs=173.7

Q ss_pred             hhcccc-ccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLK-SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~-~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ++.+.+ +||+|+||.||++.++.. .++..||||+++......   .|.+|+. |++++|||||+++|++..+ . +|+
T Consensus         9 ~~~~~~~~iG~G~fg~Vy~~~~~~~-~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-~-~~l   85 (285)
T d1u59a_           9 NLLIADIELGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-A-LML   85 (285)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-S-EEE
T ss_pred             CeEECCcEEecccCeEEEEEEEecC-CCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-e-EEE
Confidence            455666 499999999999987654 245689999997654433   6777888 9999999999999998754 3 599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        86 vmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  162 (285)
T ss_dssp             EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             EEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhccccc
Confidence            9999999999999877666899999999999999999999764   8999999999999999999999999999887654


Q ss_pred             CC-----Cccccc----------Ccccc--ccccc--------C----CCCc-----ce---eccccCCCCCCcchHHHH
Q 046594          216 SN-----RRNCEK----------TSEMA--EDIND--------F----VGGQ-----EC---LDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       216 ~~-----~~~~~~----------~~~~s--~DV~S--------~----~~~~-----~~---~~~~~~~~~~~~~~~~~~  258 (304)
                      ..     ....++          .+.++  +||||        .    .+..     ++   +....   +.+.|..++.
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~---~~~~p~~~~~  239 (285)
T d1u59a_         163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPECPP  239 (285)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC---CCCCCTTCCH
T ss_pred             ccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCcCCH
Confidence            33     112222          22233  89999        1    1111     11   11222   3456677889


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      .+.+|+.+||+     .||++|||+.+|++.|+.+..
T Consensus       240 ~l~~li~~cl~-----~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         240 ELYALMSDCWI-----YKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHHHHHHHTTC-----SSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcC-----CCHhHCcCHHHHHHHHHHHHH
Confidence            99999999999     999999999999999987654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-44  Score=310.36  Aligned_cols=218  Identities=19%  Similarity=0.215  Sum_probs=162.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC-CCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG-LQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~-~~~~  133 (304)
                      ..|++.+.||+|+||.||++.++   .+|+.||||.+......+    .+.+|+. +++++||||+++++++.+. ++.+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   80 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRK---SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   80 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CE
T ss_pred             hhCEEeEEEecCCCeEEEEEEEC---CCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEE
Confidence            57999999999999999999886   457999999987654322    5777888 9999999999999998754 3556


Q ss_pred             EEEEeecCCCChhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          134 CLVFEFMQRGSLRWNLREK---GGPLDWEKRLAIALQIDSANQMVCMYS--KPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~Lh~~~--~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                      |+|||||++|+|.+++...   +..+++..++.++.|++.||+|||+..  ..+|+||||||+|||++.++.+||+|||+
T Consensus        81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~  160 (269)
T d2java1          81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  160 (269)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHH
T ss_pred             EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccc
Confidence            9999999999999998643   337999999999999999999999753  23599999999999999999999999999


Q ss_pred             ccccCCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcch
Q 046594          209 ANYCSGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKI  254 (304)
Q Consensus       209 a~~~~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~  254 (304)
                      |+.......  ....++          ...++  +||||              |....      .+.....    ...+.
T Consensus       161 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~----~~~~~  236 (269)
T d2java1         161 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF----RRIPY  236 (269)
T ss_dssp             HHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC----CCCCT
T ss_pred             eeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----CCCCc
Confidence            998765433  223333          22233  99999              22211      1222222    34556


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..++.+.+|+.+||+     .||++|||+.|+++|
T Consensus       237 ~~s~~l~~li~~~L~-----~dp~~Rps~~ell~h  266 (269)
T d2java1         237 RYSDELNEIITRMLN-----LKDYHRPSVEEILEN  266 (269)
T ss_dssp             TSCHHHHHHHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             ccCHHHHHHHHHHcC-----CChhHCcCHHHHHhC
Confidence            677899999999999     999999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-44  Score=307.93  Aligned_cols=228  Identities=18%  Similarity=0.189  Sum_probs=171.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.+......+..||||.++......   .+.+|+. +++++||||++++|++.+  +.+++
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~i   84 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NPVWI   84 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSCEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CeEEE
Confidence            58999999999999999999987655556789999987654443   6778888 999999999999999864  34599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++......+++..++.++.|+++||+|||+.   +++||||||+||+++.++.+||+|||+|+.....
T Consensus        85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCC
Confidence            9999999999999887766899999999999999999999765   8999999999999999999999999999876543


Q ss_pred             CC---Cccccc----------Ccccc--ccccc------------CCCCc-----ceeccccCCCCCCcchHHHHHHHHH
Q 046594          216 SN---RRNCEK----------TSEMA--EDIND------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       216 ~~---~~~~~~----------~~~~s--~DV~S------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                      ..   ....++          ...++  +||||            .++..     ++..........+.+..++..+.+|
T Consensus       162 ~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l  241 (273)
T d1mp8a_         162 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL  241 (273)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             cceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence            32   122222          22233  89999            11111     1111111011235667788999999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +.+||+     .||++|||+.||+++|+++.+.+
T Consensus       242 i~~cl~-----~dp~~Rps~~ei~~~L~~i~~~~  270 (273)
T d1mp8a_         242 MTKCWA-----YDPSRRPRFTELKAQLSTILEEE  270 (273)
T ss_dssp             HHHHTC-----SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHcC-----CCHhHCcCHHHHHHHHHHHHHHh
Confidence            999999     99999999999999999987654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-44  Score=307.36  Aligned_cols=219  Identities=20%  Similarity=0.213  Sum_probs=168.7

Q ss_pred             hh-ccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeC---CCC
Q 046594           61 RR-RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQD---GLQ  131 (304)
Q Consensus        61 ~~-~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~---~~~  131 (304)
                      || +..+.||+|+||.||++.++   .+++.||+|++.......    .+.+|+. |++++|||||++++++.+   ++.
T Consensus         9 ry~~~~~~iG~G~fg~Vy~~~~~---~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   85 (270)
T d1t4ha_           9 RFLKFDIEIGRGSFKTVYKGLDT---ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK   85 (270)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             CEEEeeeEEecCcCcEEEEEEEC---CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCC
Confidence            44 66778999999999999886   357899999987543221    6778888 999999999999999864   234


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC-CCCCeeEccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD-ELCNAKLAGFGAAN  210 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfgla~  210 (304)
                      .+|+||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. ..+|+||||||+|||++ .++.+||+|||+|+
T Consensus        86 ~~~ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~  163 (270)
T d1t4ha_          86 CIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  163 (270)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             EEEEEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence            5799999999999999998776 799999999999999999999763 23499999999999997 57899999999998


Q ss_pred             ccCCCCCCcccccCcc---------cc--ccccc--------------CCCCc---ceeccccC-CCCCCcchHHHHHHH
Q 046594          211 YCSGGSNRRNCEKTSE---------MA--EDIND--------------FVGGQ---ECLDQRLY-IPNEKFKITSLAKLG  261 (304)
Q Consensus       211 ~~~~~~~~~~~~~~~~---------~s--~DV~S--------------~~~~~---~~~~~~~~-~~~~~~~~~~~~~l~  261 (304)
                      ...........|+..+         ++  +||||              |....   .+...... ..+..++...++++.
T Consensus       164 ~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  243 (270)
T d1t4ha_         164 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK  243 (270)
T ss_dssp             GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHH
T ss_pred             eccCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHH
Confidence            7655444333444222         23  89999              22211   11111110 002234455677899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +++.+||+     .||++|||+.|+++|
T Consensus       244 ~li~~~l~-----~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         244 EIIEGCIR-----QNKDERYSIKDLLNH  266 (270)
T ss_dssp             HHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHcc-----CCHhHCcCHHHHhCC
Confidence            99999999     999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-43  Score=302.62  Aligned_cols=216  Identities=20%  Similarity=0.211  Sum_probs=175.2

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      .|+..+.||+|+||.||++.++    ++..||||+++...... .+.+|+. +++++||||++++|+|.+. +.+++|||
T Consensus         5 ~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~-~~~~iv~E   79 (258)
T d1k2pa_           5 DLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-RPIFIITE   79 (258)
T ss_dssp             CCCCCCCCCEETTEEEEEEEET----TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCS-SSEEEEEE
T ss_pred             HCEEeEEEecCCCeEEEEEEEC----CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeC-CceEEEEE
Confidence            5788999999999999999874    56899999998755443 7888888 9999999999999999887 45599999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC-
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN-  217 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-  217 (304)
                      |+++|+|.+++......+++..+..++.|+++||+|||+.   ||+||||||+|||++.++.+||+|||+++....... 
T Consensus        80 y~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~  156 (258)
T d1k2pa_          80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT  156 (258)
T ss_dssp             CCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC
T ss_pred             ccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCce
Confidence            9999999999877766899999999999999999999764   899999999999999999999999999987654433 


Q ss_pred             --Cccccc----------Ccccc--ccccc--------C----CCCc--------ceeccccCCCCCCcchHHHHHHHHH
Q 046594          218 --RRNCEK----------TSEMA--EDIND--------F----VGGQ--------ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       218 --~~~~~~----------~~~~s--~DV~S--------~----~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                        ....++          ...++  +||||        .    .+.+        ..+....   +...|..++..+.++
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~---~~~~p~~~~~~l~~l  233 (258)
T d1k2pa_         157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---RLYRPHLASEKVYTI  233 (258)
T ss_dssp             CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC---CCCCCTTCCHHHHHH
T ss_pred             eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC---CCCCcccccHHHHHH
Confidence              122222          22223  99999        1    1111        1111222   345566677899999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQ  292 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~  292 (304)
                      +.+||+     .||++|||+.+++++|..
T Consensus       234 i~~cl~-----~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         234 MYSCWH-----EKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHTTC-----SSGGGSCCHHHHHHHHHC
T ss_pred             HHHHcc-----CCHhHCcCHHHHHHHhhC
Confidence            999999     999999999999999864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-44  Score=306.63  Aligned_cols=224  Identities=21%  Similarity=0.228  Sum_probs=172.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      ++.|++.+.||+|+||.||++.++     |+.||||+++.......+.+|+. +++++||||++++|++.+..+.+++||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~   80 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   80 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-----TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-----CeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence            357889999999999999999874     57899999987666667888888 999999999999999977656669999


Q ss_pred             eecCCCChhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKGG-PLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|.+++..... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~  157 (262)
T d1byga_          81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  157 (262)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCCC
Confidence            99999999999976542 689999999999999999999765   89999999999999999999999999999765443


Q ss_pred             C--Cccccc-------Ccccc--ccccc------------CCCC-----cceeccccCCCCCCcchHHHHHHHHHHHHhc
Q 046594          217 N--RRNCEK-------TSEMA--EDIND------------FVGG-----QECLDQRLYIPNEKFKITSLAKLGDIEKWCI  268 (304)
Q Consensus       217 ~--~~~~~~-------~~~~s--~DV~S------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  268 (304)
                      .  ..+...       .+.++  +||||            .+..     .++.+.....-+.+++...++++.+|+.+||
T Consensus       158 ~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl  237 (262)
T d1byga_         158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCW  237 (262)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            3  111111       23344  99999            1111     1211111101145667777889999999999


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          269 SCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       269 ~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +     .||++|||+.+++++|++++.
T Consensus       238 ~-----~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         238 H-----LDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             C-----SSGGGSCCHHHHHHHHHHHHH
T ss_pred             c-----cCHhHCcCHHHHHHHHHHHHh
Confidence            9     999999999999999999865

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-44  Score=310.93  Aligned_cols=218  Identities=18%  Similarity=0.140  Sum_probs=171.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      +.|++.+.||+|+||.||++.++   .+++.||||+++......  .+.+|+. +++++|||||++++++.+.+ .+++|
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-~~~lv   87 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNK---ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-NLWIL   87 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETT-EEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEEC---CCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-eEEEE
Confidence            35899999999999999999986   357899999997654443  6777787 99999999999999998874 45999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||||++|+|.+++.+..+++++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+......
T Consensus        88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~  164 (288)
T d2jfla1          88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI  164 (288)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCc
Confidence            999999999999877665899999999999999999999765   89999999999999999999999999997653321


Q ss_pred             C--Cccccc---------------Ccccc--ccccc--------------CCCCc--ceecccc--CCCCCCcchHHHHH
Q 046594          217 N--RRNCEK---------------TSEMA--EDIND--------------FVGGQ--ECLDQRL--YIPNEKFKITSLAK  259 (304)
Q Consensus       217 ~--~~~~~~---------------~~~~s--~DV~S--------------~~~~~--~~~~~~~--~~~~~~~~~~~~~~  259 (304)
                      .  ....|+               ...++  +||||              |....  +.+....  ..+....+...+..
T Consensus       165 ~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~  244 (288)
T d2jfla1         165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN  244 (288)
T ss_dssp             HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHH
T ss_pred             ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHH
Confidence            1  112222               11223  89999              22111  1111111  00122345667889


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+|+.+||+     .||++|||+.|+++|
T Consensus       245 ~~~li~~~L~-----~dp~~R~t~~ell~h  269 (288)
T d2jfla1         245 FKDFLKKCLE-----KNVDARWTTSQLLQH  269 (288)
T ss_dssp             HHHHHHHHSC-----SSTTTSCCHHHHTTS
T ss_pred             HHHHHHHHcc-----CChhHCcCHHHHhcC
Confidence            9999999999     999999999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-43  Score=305.04  Aligned_cols=213  Identities=18%  Similarity=0.197  Sum_probs=166.8

Q ss_pred             cccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeec
Q 046594           66 KSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        66 ~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      ++||+|+||.||++.++.. ..++.||||+++.....    +.+.+|+. +++++|||||+++|+|..+ .. ++||||+
T Consensus        13 k~iG~G~fG~Vy~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~-~lvmE~~   89 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMK-KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SW-MLVMEMA   89 (277)
T ss_dssp             EEEEECSSEEEEEEEEECS-SSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SE-EEEEECC
T ss_pred             CCcccCCCeEEEEEEEccC-CcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CE-EEEEEcC
Confidence            4699999999999987543 34578999999754322    26777888 9999999999999998654 44 8999999


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---  217 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---  217 (304)
                      ++|+|.+++.... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......   
T Consensus        90 ~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~  165 (277)
T d1xbba_          90 ELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  165 (277)
T ss_dssp             TTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred             CCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccccccccc
Confidence            9999999998766 799999999999999999999764   899999999999999999999999999987755433   


Q ss_pred             --Cccccc----------Ccccc--ccccc--------CC----CCc--------ceeccccCCCCCCcchHHHHHHHHH
Q 046594          218 --RRNCEK----------TSEMA--EDIND--------FV----GGQ--------ECLDQRLYIPNEKFKITSLAKLGDI  263 (304)
Q Consensus       218 --~~~~~~----------~~~~s--~DV~S--------~~----~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l  263 (304)
                        ....++          .+.++  +||||        +.    +..        ..+....   +.+.|..++..+.+|
T Consensus       166 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~---~~~~p~~~~~~~~~l  242 (277)
T d1xbba_         166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE---RMGCPAGCPREMYDL  242 (277)
T ss_dssp             C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTCCHHHHHH
T ss_pred             cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCC---CCCCCcccCHHHHHH
Confidence              112222          22233  99999        11    111        1122222   345667778899999


Q ss_pred             HHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          264 EKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       264 ~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      +.+||+     .||++|||+.+|++.|+..
T Consensus       243 i~~cl~-----~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         243 MNLCWT-----YDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHTC-----SSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHcC-----CCHhHCcCHHHHHHHhhCH
Confidence            999999     9999999999999888764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-43  Score=308.30  Aligned_cols=226  Identities=20%  Similarity=0.212  Sum_probs=167.7

Q ss_pred             HhhccccccCCccccceeeecceeec--CCCcEEEEEEeccccchh---HHHHHH-HhhCC-CCCcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVS--RNLTVVAVKARRYMASQT---KLEEEI-LLKSS-SHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~vavK~~~~~~~~~---~~~~e~-~l~~l-~h~niv~~~~~~~~~~~~  132 (304)
                      .+|++.+.||+|+||.||++.+++..  .+++.||||+++......   .+..+. .+.++ +|+||+.+++++...+..
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   92 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   92 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence            57999999999999999999886542  346789999997654433   343444 45544 789999999999887777


Q ss_pred             eEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC
Q 046594          133 RCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE  197 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~  197 (304)
                      +++|||||++|+|.++++...               ..+++..++.++.|+++||+|||+.   +|+||||||+|||++.
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~  169 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE  169 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECG
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECC
Confidence            799999999999999997542               2589999999999999999999764   8999999999999999


Q ss_pred             CCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc------------CCCCc---------ce
Q 046594          198 LCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND------------FVGGQ---------EC  240 (304)
Q Consensus       198 ~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S------------~~~~~---------~~  240 (304)
                      ++.+||+|||+|+.......    ....++          .+.++  +||||            .++..         ..
T Consensus       170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~  249 (299)
T d1ywna1         170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  249 (299)
T ss_dssp             GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred             CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            99999999999987654433    222333          22233  99999            11111         11


Q ss_pred             eccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          241 LDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      +....   +...+...++.+.+++.+||+     .||++|||+.|+++||+++.+.
T Consensus       250 ~~~~~---~~~~~~~~~~~l~~li~~cl~-----~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         250 LKEGT---RMRAPDYTTPEMYQTMLDCWH-----GEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHHTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HhcCC---CCCCCccCCHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHHHhC
Confidence            12222   345566677889999999999     9999999999999999999754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-44  Score=314.79  Aligned_cols=167  Identities=17%  Similarity=0.192  Sum_probs=140.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .+|++.+.||+|+||.||++.++   .+|+.||+|+++.....   ..+.+|+. |++++|||||+++++|.+. ..+|+
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-~~~~i   81 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHK---PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISI   81 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEET---TTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS-SEEEE
T ss_pred             cCCEEEEEEecCCCeEEEEEEEC---CCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-CEEEE
Confidence            57999999999999999999886   45799999999764333   26777888 9999999999999999988 45599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+.+  +|+||||||+|||++.++.+||+|||+|+.....
T Consensus        82 VmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  158 (322)
T d1s9ja_          82 CMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  158 (322)
T ss_dssp             EEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             EEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCccccCCC
Confidence            999999999999998776 7999999999999999999998633  7999999999999999999999999999976544


Q ss_pred             CCCccccc----------Ccccc--ccccc
Q 046594          216 SNRRNCEK----------TSEMA--EDIND  233 (304)
Q Consensus       216 ~~~~~~~~----------~~~~s--~DV~S  233 (304)
                      ......|+          ...++  +||||
T Consensus       159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWS  188 (322)
T d1s9ja_         159 MANSFVGTRSYMSPERLQGTHYSVQSDIWS  188 (322)
T ss_dssp             TC---CCSSCCCCHHHHHCSCCCTTHHHHH
T ss_pred             ccccccCCccccCchHHcCCCCCcHHHHHH
Confidence            33333444          22333  99999

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-43  Score=310.67  Aligned_cols=220  Identities=22%  Similarity=0.234  Sum_probs=171.1

Q ss_pred             HhhccccccCCccccceeeecceeecCC--CcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRN--LTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~--~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~  132 (304)
                      .+|++.+.||+|+||.||++.+++..+.  ...||+|.+.......   .+.+|+. ++++ +|||||++++++.+.+. 
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~-  115 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP-  115 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe-
Confidence            5789999999999999999998765332  3479999986543332   5666666 8887 89999999999998855 


Q ss_pred             eEEEEeecCCCChhhHhhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 046594          133 RCLVFEFMQRGSLRWNLREKG----------------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITS  190 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~----------------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp  190 (304)
                      +++|||||++|+|.++++...                      ..+++..++.++.|++.||+|||+.   +|+||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCch
Confidence            499999999999999997653                      1589999999999999999999764   899999999


Q ss_pred             CCeeeCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc---------------CCCCc-
Q 046594          191 DNILLDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND---------------FVGGQ-  238 (304)
Q Consensus       191 ~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S---------------~~~~~-  238 (304)
                      +|||++.++.+||+|||+|+.......    ....++          .+.++  +||||               |.... 
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999987655443    122223          22333  89999               11111 


Q ss_pred             -----ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Q 046594          239 -----ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLK  291 (304)
Q Consensus       239 -----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~  291 (304)
                           .++....   +.+.|..+++.+.+|+.+||+     .||++|||++||+++|.
T Consensus       273 ~~~~~~~~~~~~---~~~~p~~~~~~l~~li~~cl~-----~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         273 DANFYKLIQNGF---KMDQPFYATEEIYIIMQSCWA-----FDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             SHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHhcCC---CCCCCCcCCHHHHHHHHHHcC-----CChhHCcCHHHHHHHHh
Confidence                 2222333   345667778899999999999     99999999999999995

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-43  Score=309.56  Aligned_cols=214  Identities=19%  Similarity=0.170  Sum_probs=169.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ++|+.++.||+|+||.||++.++   .+++.||||+++......     .+..|+. +++++|||||++++++.+. +.+
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-~~~   90 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDV---RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-HTA   90 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-TEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEEC---CCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEEC-CEE
Confidence            46999999999999999999876   457899999997654322     5667787 9999999999999999887 455


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+|||||++|+|..++.... ++++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+|+...
T Consensus        91 ~iv~E~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~  166 (309)
T d1u5ra_          91 WLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (309)
T ss_dssp             EEEEECCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             EEEEEecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccC
Confidence            99999999999977666554 899999999999999999999765   89999999999999999999999999998775


Q ss_pred             CCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... .++..+          .+.++  +||||              |....      .+.....   ....+...++.+
T Consensus       167 ~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~s~~~  243 (309)
T d1u5ra_         167 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES---PALQSGHWSEYF  243 (309)
T ss_dssp             SBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSCTTSCHHH
T ss_pred             CCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC---CCCCCCCCCHHH
Confidence            5433 222221          12244  99999              21111      1111111   122234557889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+|+.+||+     .||.+|||+.|+++|
T Consensus       244 ~~li~~~L~-----~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         244 RNFVDSCLQ-----KIPQDRPTSEVLLKH  267 (309)
T ss_dssp             HHHHHHHTC-----SSGGGSCCHHHHTTC
T ss_pred             HHHHHHHCc-----CChhHCcCHHHHHhC
Confidence            999999999     999999999999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.5e-43  Score=312.82  Aligned_cols=218  Identities=16%  Similarity=0.151  Sum_probs=175.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      ..+|++.+.||+|+||.||+|.++   .+|+.||||+++.....+  .+.+|+. |++++|||||++++++.++ +.+|+
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-~~~~i  103 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEK---ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK-YEMVL  103 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS-SEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-CEEEE
Confidence            358999999999999999999886   457999999997655433  6677777 9999999999999999887 55599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC--CCCCeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD--ELCNAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~--~~~~~kl~Dfgla~~~~  213 (304)
                      |||||++|+|.+.+...+.++++..++.++.||+.||+|||+.   ||+||||||+|||++  .++.+||+|||+|+...
T Consensus       104 vmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~  180 (352)
T d1koba_         104 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  180 (352)
T ss_dssp             EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecC
Confidence            9999999999998877766899999999999999999999764   899999999999998  57899999999999887


Q ss_pred             CCCC-Cccccc----------Ccccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... ....++          ...++  +||||              |....  +    +...... .........+..+
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s~~~  259 (352)
T d1koba_         181 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE-FDEDAFSSVSPEA  259 (352)
T ss_dssp             TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC-CCSSTTTTSCHHH
T ss_pred             CCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCcccccCCCHHH
Confidence            6554 333333          22233  99999              32222  1    1111110 0233345667889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+|+.+||+     .||.+|||+.|+++|
T Consensus       260 ~~li~~~L~-----~dp~~R~s~~eil~H  283 (352)
T d1koba_         260 KDFIKNLLQ-----KEPRKRLTVHDALEH  283 (352)
T ss_dssp             HHHHHTTSC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHHcc-----CChhHCcCHHHHhcC
Confidence            999999999     999999999999986

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=4.5e-43  Score=312.64  Aligned_cols=218  Identities=15%  Similarity=0.142  Sum_probs=174.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      +.+|++.+.||+|+||.||++.++   .+|+.||||++.......  .+.+|+. |++++|||||++++++.+. +.+|+
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~---~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-~~~~i  100 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTER---ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD-NEMVM  100 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET---TTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET-TEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-CEEEE
Confidence            468999999999999999999886   457999999997655443  6777888 9999999999999999887 55599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC--CCCCeeEcccccccccC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD--ELCNAKLAGFGAANYCS  213 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~--~~~~~kl~Dfgla~~~~  213 (304)
                      |||||++|+|.+++....+.+++..+..++.||+.||+|||+.   ||+||||||+|||++  .++.+||+|||+|+...
T Consensus       101 vmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~  177 (350)
T d1koaa2         101 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  177 (350)
T ss_dssp             EECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred             EEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence            9999999999999976665899999999999999999999765   899999999999996  46789999999999876


Q ss_pred             CCCC-CcccccC----------cccc--ccccc--------------CCCCc--c----eeccccCCCCCCcchHHHHHH
Q 046594          214 GGSN-RRNCEKT----------SEMA--EDIND--------------FVGGQ--E----CLDQRLYIPNEKFKITSLAKL  260 (304)
Q Consensus       214 ~~~~-~~~~~~~----------~~~s--~DV~S--------------~~~~~--~----~~~~~~~~~~~~~~~~~~~~l  260 (304)
                      .... ....++.          ..++  +||||              |....  +    +...... .........++.+
T Consensus       178 ~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s~~~  256 (350)
T d1koaa2         178 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN-MDDSAFSGISEDG  256 (350)
T ss_dssp             TTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-SCCGGGGGCCHHH
T ss_pred             cccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCcccccCCCHHH
Confidence            6554 3334442          2223  99999              22211  1    1111110 0222334567889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          261 GDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       261 ~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+|+.+||.     .||++|||+.|+++|
T Consensus       257 ~~li~~~L~-----~dP~~R~t~~eil~h  280 (350)
T d1koaa2         257 KDFIRKLLL-----ADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHHHCC-----SSGGGSCCHHHHHHS
T ss_pred             HHHHHHHcc-----CChhHCcCHHHHhcC
Confidence            999999999     999999999999986

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.4e-43  Score=306.47  Aligned_cols=217  Identities=19%  Similarity=0.211  Sum_probs=159.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..+|++.+.||+|+||.||++.++   .+++.||||++.......   .+.+|+. +++++||||+++++++.++ +.+|
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-~~~~   83 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDK---RTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG-GHLY   83 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEET---TTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECS-SEEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEEC---CCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-CEEE
Confidence            356999999999999999999886   357899999997654332   5667777 9999999999999999887 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeC---CCCCeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLD---ELCNAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~---~~~~~kl~Dfgla~~  211 (304)
                      +|||||++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||+.   .++.+||+|||+|+.
T Consensus        84 lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~  159 (307)
T d1a06a_          84 LIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM  159 (307)
T ss_dssp             EEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred             EEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEE
Confidence            9999999999999998765 899999999999999999999764   899999999999995   578999999999987


Q ss_pred             cCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHH
Q 046594          212 CSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLA  258 (304)
Q Consensus       212 ~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~  258 (304)
                      ...... ....|+          ...++  +||||              |....      .+...... .....+...++
T Consensus       160 ~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s~  238 (307)
T d1a06a_         160 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE-FDSPYWDDISD  238 (307)
T ss_dssp             -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCC-CCTTTTTTSCH
T ss_pred             ccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CCCccccCCCH
Confidence            765443 333444          22233  99999              22221      12222210 02233456678


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          259 KLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       259 ~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+.+|+.+||+     .||++|||+.|+++|
T Consensus       239 ~~~~li~~~L~-----~dP~~R~s~~eil~h  264 (307)
T d1a06a_         239 SAKDFIRHLME-----KDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHHHHHHHHSC-----SSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHcc-----CCHhHCcCHHHHhcC
Confidence            89999999999     999999999999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.3e-43  Score=307.12  Aligned_cols=227  Identities=21%  Similarity=0.245  Sum_probs=178.1

Q ss_pred             HhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.+++.  ..+++.||||+++......   .+.+|+. +++++||||+++++++...+.. 
T Consensus        13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~-   91 (301)
T d1lufa_          13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM-   91 (301)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC-
T ss_pred             HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce-
Confidence            4689999999999999999998764  2456899999997655443   6778888 9999999999999999887555 


Q ss_pred             EEEEeecCCCChhhHhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 046594          134 CLVFEFMQRGSLRWNLREKG-----------------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITS  190 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp  190 (304)
                      +++|||+++|+|.+++....                       ..+++..+..++.|++.||+|||+.   +++||||||
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp  168 (301)
T d1lufa_          92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT  168 (301)
T ss_dssp             EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred             EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcc
Confidence            99999999999999987532                       1489999999999999999999764   899999999


Q ss_pred             CCeeeCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc------------CCCCc----
Q 046594          191 DNILLDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND------------FVGGQ----  238 (304)
Q Consensus       191 ~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S------------~~~~~----  238 (304)
                      +|||++.++++||+|||+|+.......    ....++          ...++  +||||            .++..    
T Consensus       169 ~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~  248 (301)
T d1lufa_         169 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH  248 (301)
T ss_dssp             GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             cceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH
Confidence            999999999999999999986644322    122222          22333  99999            11111    


Q ss_pred             -ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          239 -ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       239 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                       ++............+..++.++.+|+.+||+     .||++||||.||++.|++|.+
T Consensus       249 ~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~-----~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         249 EEVIYYVRDGNILACPENCPLELYNLMRLCWS-----KLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCCCCCccchHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHhcC
Confidence             1111111001234566777899999999999     999999999999999999853

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-43  Score=303.97  Aligned_cols=219  Identities=20%  Similarity=0.175  Sum_probs=171.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .+|++.+.||+|+||.||++.++    +++.||||+++...... .|.+|+. +++++|||||+++|++.++ +. ++||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~----~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~-~lv~   90 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PI-YIVT   90 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET----TTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SC-EEEE
T ss_pred             HHEEEeeEEeeCCCeEEEEEEEC----CCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecC-Ce-EEEE
Confidence            58999999999999999999875    45689999997655433 7888888 9999999999999998553 44 9999


Q ss_pred             eecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCC
Q 046594          138 EFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGS  216 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~  216 (304)
                      ||+++|+|..++.... ..+++.+++.++.|++.||+|||+.   +|+||||||+|||++.++++||+|||+++......
T Consensus        91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~  167 (285)
T d1fmka3          91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  167 (285)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred             EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence            9999999998887543 3799999999999999999999765   89999999999999999999999999998775443


Q ss_pred             C---Cccccc----------Ccccc--ccccc------------CCCCc-----c---eeccccCCCCCCcchHHHHHHH
Q 046594          217 N---RRNCEK----------TSEMA--EDIND------------FVGGQ-----E---CLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       217 ~---~~~~~~----------~~~~s--~DV~S------------~~~~~-----~---~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      .   ....++          .+.++  +||||            .+...     +   .+....   +.+.+..++.++.
T Consensus       168 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~  244 (285)
T d1fmka3         168 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---RMPCPPECPESLH  244 (285)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTSCHHHH
T ss_pred             ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC---CCCCCcccCHHHH
Confidence            2   222233          23333  99999            11111     1   122222   3456677888999


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      +++.+||+     .||++|||+.+|++.|+.+..
T Consensus       245 ~li~~cl~-----~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         245 DLMCQCWR-----KEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             HHHHHHTC-----SSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHHcc-----cCHhHCcCHHHHHHHHhhhhc
Confidence            99999999     999999999999999887543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-42  Score=303.23  Aligned_cols=224  Identities=17%  Similarity=0.141  Sum_probs=173.3

Q ss_pred             ccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEeec
Q 046594           65 LKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFEFM  140 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~  140 (304)
                      .+.||+|+||+||++.+.........||||+++......   .|.+|+. +++++||||++++|++...++.+++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            467999999999999886543334579999997543332   6788888 999999999999999887656669999999


Q ss_pred             CCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCCCC---
Q 046594          141 QRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGGSN---  217 (304)
Q Consensus       141 ~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---  217 (304)
                      ++|+|.+++......+++..++.++.|++.||.|||+.   +|+||||||+|||+++++.+||+|||+++.......   
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            99999999988776889999999999999999999765   899999999999999999999999999987754432   


Q ss_pred             ---Cccccc----------Ccccc--ccccc------------CCCCc-----ceeccccCCCCCCcchHHHHHHHHHHH
Q 046594          218 ---RRNCEK----------TSEMA--EDIND------------FVGGQ-----ECLDQRLYIPNEKFKITSLAKLGDIEK  265 (304)
Q Consensus       218 ---~~~~~~----------~~~~s--~DV~S------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~  265 (304)
                         ....++          .+.++  +||||            .+...     ++........+...|..+++.+.+|+.
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~  268 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML  268 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHH
Confidence               111222          23333  89999            11111     111110100023445667788999999


Q ss_pred             HhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          266 WCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       266 ~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      +||+     .||++||||.||+++|+++.+.
T Consensus       269 ~cl~-----~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         269 KCWH-----PKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHTC-----SSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHcC-----CCHhHCcCHHHHHHHHHHHHHh
Confidence            9999     9999999999999999999764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=299.56  Aligned_cols=221  Identities=20%  Similarity=0.181  Sum_probs=166.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      ++|++.+.||+|+||.||++.+.........||||++......     ..|.+|+. +++++||||++++|++.++ .. 
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~-   85 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PM-   85 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SC-
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-ch-
Confidence            5799999999999999999988655444568999998754321     16777788 9999999999999999764 44 


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      ++||||+++|+|.+++......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~  162 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP  162 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcc
Confidence            899999999999998887766899999999999999999999764   89999999999999999999999999999875


Q ss_pred             CCCC----C-ccccc----------Ccccc--ccccc--------CCCCc-------------ceeccccCCCCCCcchH
Q 046594          214 GGSN----R-RNCEK----------TSEMA--EDIND--------FVGGQ-------------ECLDQRLYIPNEKFKIT  255 (304)
Q Consensus       214 ~~~~----~-~~~~~----------~~~~s--~DV~S--------~~~~~-------------~~~~~~~~~~~~~~~~~  255 (304)
                      ....    . ...++          ...++  +||||        ...+.             .+.....   +.+.+..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~  239 (273)
T d1u46a_         163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE---RLPRPED  239 (273)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCC---CCCCCTT
T ss_pred             cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCC---CCCCccc
Confidence            5433    1 11112          22233  99999        11111             1222222   2344566


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHH
Q 046594          256 SLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQV  293 (304)
Q Consensus       256 ~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~  293 (304)
                      .+..+.+|+.+||+     .||++|||+.+|++.|++.
T Consensus       240 ~~~~l~~li~~cl~-----~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         240 CPQDIYNVMVQCWA-----HKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHhc
Confidence            77889999999999     9999999999999988865

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-42  Score=302.99  Aligned_cols=227  Identities=20%  Similarity=0.180  Sum_probs=176.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~~~  134 (304)
                      ..|++.+.||+|+||.||++.++.+. ....||||+++.....+   .+.+|+. |+++ +|||||+++|++.+. +.++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~-~~~~   87 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-GYLY   87 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETT-EEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET-TEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCC-eEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecC-CeeE
Confidence            57899999999999999999987532 11357888886543322   6777777 9998 799999999999987 4559


Q ss_pred             EEEeecCCCChhhHhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC
Q 046594          135 LVFEFMQRGSLRWNLREK---------------GGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC  199 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~  199 (304)
                      +||||+++|+|.++++..               ...+++..++.++.|++.||.|||+.   +|+||||||+|||++.++
T Consensus        88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~  164 (309)
T d1fvra_          88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY  164 (309)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred             EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCC
Confidence            999999999999999754               23799999999999999999999765   899999999999999999


Q ss_pred             CeeEcccccccccCCCCC-Cccccc----------Ccccc--ccccc------------CCCCc-----ce---eccccC
Q 046594          200 NAKLAGFGAANYCSGGSN-RRNCEK----------TSEMA--EDIND------------FVGGQ-----EC---LDQRLY  246 (304)
Q Consensus       200 ~~kl~Dfgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S------------~~~~~-----~~---~~~~~~  246 (304)
                      .+||+|||+++....... ....++          .+.++  +||||            .+...     ++   +.... 
T Consensus       165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~-  243 (309)
T d1fvra_         165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-  243 (309)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC-
T ss_pred             ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcC-
Confidence            999999999986654333 222222          23333  99999            11111     11   22222 


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLFSS  299 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~~~  299 (304)
                        +.+.+..+++.+.+|+.+||+     .||++||||.+|+++|+++.+....
T Consensus       244 --~~~~~~~~~~~~~~li~~cl~-----~dP~~RPs~~eil~~L~~i~~~~~~  289 (309)
T d1fvra_         244 --RLEKPLNCDDEVYDLMRQCWR-----EKPYERPSFAQILVSLNRMLEERKT  289 (309)
T ss_dssp             --CCCCCTTBCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred             --CCCCCccCCHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHHHhcCcC
Confidence              345667778999999999999     9999999999999999999875543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-42  Score=302.04  Aligned_cols=217  Identities=19%  Similarity=0.182  Sum_probs=171.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc--------hhHHHHHHH-hhCCCCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS--------QTKLEEEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||++.++   .+|+.||||+++....        ...+.+|+. |++++|||||++++++.+.
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~---~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREK---STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   85 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             ccCEEEeEEEecCCCeEEEEEEEC---CCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            357999999999999999999986   4579999999864322        126777888 9999999999999999888


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC----CeeEcc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC----NAKLAG  205 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~----~~kl~D  205 (304)
                       +.+|+|||||++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++    .+||+|
T Consensus        86 -~~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~D  160 (293)
T d1jksa_          86 -TDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID  160 (293)
T ss_dssp             -SEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECC
T ss_pred             -CEEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecc
Confidence             45599999999999999998776 799999999999999999999765   899999999999998776    499999


Q ss_pred             cccccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc--ceec----cccCCCCCCc
Q 046594          206 FGAANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLD----QRLYIPNEKF  252 (304)
Q Consensus       206 fgla~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~----~~~~~~~~~~  252 (304)
                      ||+|+....... ....++          ...++  +||||              |....  +.+.    ... ......
T Consensus       161 fG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~  239 (293)
T d1jksa_         161 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEY  239 (293)
T ss_dssp             CTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC-CCCHHH
T ss_pred             hhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-CCCchh
Confidence            999988765443 333333          22233  99999              22211  1111    111 001222


Q ss_pred             chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          253 KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       253 ~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +...+..+.+|+.+||+     .||++|||+.|+++|
T Consensus       240 ~~~~s~~~~~li~~~L~-----~dP~~R~s~~eil~h  271 (293)
T d1jksa_         240 FSNTSALAKDFIRRLLV-----KDPKKRMTIQDSLQH  271 (293)
T ss_dssp             HTTSCHHHHHHHHTTSC-----SSGGGSCCHHHHHHS
T ss_pred             cCCCCHHHHHHHHHHcc-----CChhHCcCHHHHhcC
Confidence            34556789999999999     999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-43  Score=305.25  Aligned_cols=216  Identities=17%  Similarity=0.137  Sum_probs=170.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.++   .+++.||||++.....     ...+.+|+. +++++||||+++++++.+. +.+
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-~~~   83 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLAREL---ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD-EKL   83 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS-SEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC-CEE
Confidence            46999999999999999999986   3578999999874322     126777887 9999999999999999887 555


Q ss_pred             EEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccC
Q 046594          134 CLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCS  213 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~  213 (304)
                      |+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+...
T Consensus        84 ~ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  159 (288)
T d1uu3a_          84 YFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS  159 (288)
T ss_dssp             EEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecc
Confidence            99999999999999988776 799999999999999999999765   89999999999999999999999999998875


Q ss_pred             CCCC----CcccccCc----------ccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHH
Q 046594          214 GGSN----RRNCEKTS----------EMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       214 ~~~~----~~~~~~~~----------~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ....    ....|+..          .++  +||||              |....  ++..... .....+|...++.+.
T Consensus       160 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~  238 (288)
T d1uu3a_         160 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-KLEYDFPEKFFPKAR  238 (288)
T ss_dssp             ----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-TTCCCCCTTCCHHHH
T ss_pred             cCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHH-cCCCCCCccCCHHHH
Confidence            4322    22344422          223  89999              32222  1111111 012345666778899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +|+.+||+     .||++|||+.|++++
T Consensus       239 ~li~~~L~-----~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         239 DLVEKLLV-----LDATKRLGCEEMEGY  261 (288)
T ss_dssp             HHHHTTSC-----SSGGGSTTSGGGTCH
T ss_pred             HHHHHHcc-----CCHhHCcCHHHHcCC
Confidence            99999999     999999999997654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-42  Score=299.81  Aligned_cols=227  Identities=19%  Similarity=0.227  Sum_probs=173.7

Q ss_pred             HHhhccccccCCccccceeeecceeec----CCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVS----RNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~----~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~  129 (304)
                      ..+|++.+.||+|+||.||++.+.++.    .++..||||+++......   .+.+|.. +.++ +|||||+++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            358999999999999999999876543    234689999997765433   5555555 7666 899999999999987


Q ss_pred             CCceEEEEeecCCCChhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKG---------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNIL  194 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nil  194 (304)
                      +. +++||||+++|+|.+++....               ..+++.+++.++.|++.||+|||+.   +|+||||||+|||
T Consensus        92 ~~-~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiL  167 (299)
T d1fgka_          92 GP-LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL  167 (299)
T ss_dssp             SS-CEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             Ce-EEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeeccccee
Confidence            44 599999999999999997553               2589999999999999999999765   7999999999999


Q ss_pred             eCCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc---------------CCCCc-----
Q 046594          195 LDELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND---------------FVGGQ-----  238 (304)
Q Consensus       195 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S---------------~~~~~-----  238 (304)
                      ++.++.+||+|||+++.......    ....++          .+.++  +||||               |....     
T Consensus       168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~  247 (299)
T d1fgka_         168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF  247 (299)
T ss_dssp             ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHH
Confidence            99999999999999987755433    112222          22333  89999               11111     


Q ss_pred             ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          239 ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      ..+....   +...+...+..+.+|+.+||+     .||++|||+.||++.|+++.++-
T Consensus       248 ~~i~~~~---~~~~p~~~~~~l~~li~~cl~-----~dP~~Rps~~eil~~L~~i~a~~  298 (299)
T d1fgka_         248 KLLKEGH---RMDKPSNCTNELYMMMRDCWH-----AVPSQRPTFKQLVEDLDRIVALT  298 (299)
T ss_dssp             HHHHTTC---CCCCCSSCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHcCC---CCCCCccchHHHHHHHHHHcc-----CCHhHCcCHHHHHHHHHHHhhcC
Confidence            2222233   345566777899999999999     99999999999999999997653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-42  Score=304.07  Aligned_cols=224  Identities=16%  Similarity=0.133  Sum_probs=174.9

Q ss_pred             hhccccccCCccccceeeecceeecC-CCcEEEEEEeccccch---hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSR-NLTVVAVKARRYMASQ---TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~vavK~~~~~~~~---~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .|++.+.||+|+||.||++.+..+.. ....||+|+++.....   ..+.+|+. +++++|||||+++|+|.++ +. ++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~-~~   87 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV-QL   87 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SE-EE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Ce-eE
Confidence            58999999999999999998764321 1246899998654322   26777888 9999999999999999875 44 88


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ++||+.+|+|.+.+......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.....
T Consensus        88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  164 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  164 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred             EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence            9999999999999888777899999999999999999999764   8999999999999999999999999999987554


Q ss_pred             CC----Cccccc----------Ccccc--ccccc--------C----CCCc--------ceeccccCCCCCCcchHHHHH
Q 046594          216 SN----RRNCEK----------TSEMA--EDIND--------F----VGGQ--------ECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       216 ~~----~~~~~~----------~~~~s--~DV~S--------~----~~~~--------~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      ..    ....++          .+.++  +||||        .    ++..        ..+....   +...|..++..
T Consensus       165 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~---~~~~p~~~~~~  241 (317)
T d1xkka_         165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICTID  241 (317)
T ss_dssp             CC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC---CCCCCTTBCHH
T ss_pred             cccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC---CCCCCcccCHH
Confidence            33    111222          22334  99999        1    1111        1122222   34556677889


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      +.+|+.+||+     .||.+|||+.|++++|+++...+
T Consensus       242 ~~~li~~cl~-----~dP~~RPs~~eil~~l~~~~~~~  274 (317)
T d1xkka_         242 VYMIMVKCWM-----IDADSRPKFRELIIEFSKMARDP  274 (317)
T ss_dssp             HHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHSH
T ss_pred             HHHHHHHhCC-----CChhhCcCHHHHHHHHHHHHhCh
Confidence            9999999999     99999999999999999987644

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=306.64  Aligned_cols=218  Identities=16%  Similarity=0.162  Sum_probs=173.1

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCCceEEE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLV  136 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv  136 (304)
                      ..||++.+.||+|+||.||++.++   .+++.||||.++....+. .+.+|+. |+.++||||+++++++.+. +.+|+|
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~---~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-~~~~lv   79 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVET---SSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM-EELVMI   79 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET-TEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEEC---CCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-CEEEEE
Confidence            468999999999999999999886   357899999998765544 6777888 9999999999999999887 455999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC--CCeeEcccccccccCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL--CNAKLAGFGAANYCSG  214 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~--~~~kl~Dfgla~~~~~  214 (304)
                      ||||+||+|.+++...+..+++.+++.|+.|++.||+|||+.   ||+||||||+|||++.+  +.+||+|||+++....
T Consensus        80 mE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~  156 (321)
T d1tkia_          80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence            999999999999987766799999999999999999999764   89999999999999854  5899999999988765


Q ss_pred             CCC-Cccccc----------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcchHHHHHHH
Q 046594          215 GSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFKITSLAKLG  261 (304)
Q Consensus       215 ~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~~~~~~~l~  261 (304)
                      ... ....++          ...++  +||||              |....      .+....... ........+..+.
T Consensus       157 ~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~  235 (321)
T d1tkia_         157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF-DEEAFKEISIEAM  235 (321)
T ss_dssp             TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC-CHHHHTTSCHHHH
T ss_pred             CCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-ChhhccCCCHHHH
Confidence            443 222333          22233  89999              22222      122222200 1111224567899


Q ss_pred             HHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          262 DIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       262 ~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +|+.+||.     .||.+|||+.|+++|
T Consensus       236 ~li~~~L~-----~dp~~R~s~~eil~h  258 (321)
T d1tkia_         236 DFVDRLLV-----KERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHTTSC-----SSGGGSCCHHHHHHS
T ss_pred             HHHHHHcc-----CChhHCcCHHHHhcC
Confidence            99999999     999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3e-42  Score=297.89  Aligned_cols=217  Identities=19%  Similarity=0.169  Sum_probs=172.8

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----------hHHHHHHH-hhCCC-CCcccceeee
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----------TKLEEEIL-LKSSS-HLNIVTLLGY  125 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~e~~-l~~l~-h~niv~~~~~  125 (304)
                      ..+|++.+.||+|+||+||++.++   .+|+.+|||+++.....           ..+.+|+. +++++ ||||++++++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~---~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~   78 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHK---PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   78 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             cccCEEceEEecCcCeEEEEEEEC---CCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence            468999999999999999999875   46899999998754321           14556777 99996 9999999999


Q ss_pred             eeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcc
Q 046594          126 PQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAG  205 (304)
Q Consensus       126 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~D  205 (304)
                      +.++ +.+|+||||+++|+|.+++...+ ++++.++..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|
T Consensus        79 ~~~~-~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~D  153 (277)
T d1phka_          79 YETN-TFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD  153 (277)
T ss_dssp             EECS-SEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred             cccC-cceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEcc
Confidence            9987 55599999999999999998776 899999999999999999999765   899999999999999999999999


Q ss_pred             cccccccCCCCC-Cccccc----------------Ccccc--ccccc--------------CCCCc------ceeccccC
Q 046594          206 FGAANYCSGGSN-RRNCEK----------------TSEMA--EDIND--------------FVGGQ------ECLDQRLY  246 (304)
Q Consensus       206 fgla~~~~~~~~-~~~~~~----------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~  246 (304)
                      ||+++....... ....++                ...++  +||||              |....      .+......
T Consensus       154 FG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~  233 (277)
T d1phka_         154 FGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ  233 (277)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             chheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCC
Confidence            999988765433 222333                11123  89999              32222      12222221


Q ss_pred             CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          247 IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       247 ~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      . ........++++.+++.+||+     .||++|||+.|+++|
T Consensus       234 ~-~~~~~~~~s~~~~~li~~~L~-----~~p~~R~s~~eil~h  270 (277)
T d1phka_         234 F-GSPEWDDYSDTVKDLVSRFLV-----VQPQKRYTAEEALAH  270 (277)
T ss_dssp             C-CTTTGGGSCHHHHHHHHHHCC-----SSGGGSCCHHHHTTS
T ss_pred             C-CCcccccCCHHHHHHHHHHcc-----CChhHCcCHHHHHcC
Confidence            0 223334677899999999999     999999999999876

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-41  Score=296.99  Aligned_cols=226  Identities=20%  Similarity=0.158  Sum_probs=172.9

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCCCCcccceeeeeeCCCC---ceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ---RRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~h~niv~~~~~~~~~~~---~~~  134 (304)
                      +.|.+.+.||+|+||.||++.+     +|+.||||+++...... ..+.|+. +++++||||+++++++.+.+.   .+|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-----~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~   77 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-----TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEE
Confidence            5788899999999999999975     46899999997665444 3444566 778899999999999976542   469


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMY-----SKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~-----~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      +||||+++|+|.+++++.  .+++..++.++.|++.||+|||+.     ++++|+||||||+||||+.++++||+|||++
T Consensus        78 lv~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence            999999999999999875  599999999999999999999963     4679999999999999999999999999999


Q ss_pred             cccCCCCC------CcccccCcc----------------cc--ccccc--------------CCCCc-------------
Q 046594          210 NYCSGGSN------RRNCEKTSE----------------MA--EDIND--------------FVGGQ-------------  238 (304)
Q Consensus       210 ~~~~~~~~------~~~~~~~~~----------------~s--~DV~S--------------~~~~~-------------  238 (304)
                      +.......      ....++.++                ++  +||||              +....             
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~  235 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence            87754432      112233111                22  79999              00000             


Q ss_pred             --------ceeccccCCC-CCCc-chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          239 --------ECLDQRLYIP-NEKF-KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       239 --------~~~~~~~~~~-~~~~-~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                              ...+..+... .... +.+....+.+++.+||+     .||++|||+.||+++|+++.+-+
T Consensus       236 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~-----~dp~~Rps~~ei~~~L~~i~~~~  299 (303)
T d1vjya_         236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWY-----ANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCC-----SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcc-----cCHhHCcCHHHHHHHHHHHHHhc
Confidence                    1111111000 1111 23455679999999999     99999999999999999998654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-42  Score=302.31  Aligned_cols=217  Identities=17%  Similarity=0.187  Sum_probs=173.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +..|++.+.||+|+||.||++.++   .+|+.||||+++....     ...+.+|+. |++++||||+++++++.+. ..
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~---~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-~~   79 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREK---ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-DR   79 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-SE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc-cc
Confidence            357999999999999999999986   4579999999975422     125666777 9999999999999999988 55


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+|||||++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.+|.+||+|||+|+..
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~  155 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             cccceeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeeccccccc
Confidence            599999999999999998877 799999999999999999999765   8999999999999999999999999999876


Q ss_pred             CCCCC--CcccccCcc----------cc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEKTSE----------MA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~~~~----------~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ...+|+..+          ++  +||||              |....  ++..... .....+|...++.+.+
T Consensus       156 ~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~d  234 (337)
T d1o6la_         156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-MEEIRFPRTLSPEAKS  234 (337)
T ss_dssp             CCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHHH
T ss_pred             ccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHh-cCCCCCCccCCHHHHH
Confidence            54332  334444222          23  99999              22221  1111111 1123556677888999


Q ss_pred             HHHHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      |+.+||+     +||.+||+     +.|+++|
T Consensus       235 li~~~L~-----~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         235 LLAGLLK-----KDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHTC-----SSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHhhcc-----CCchhhcccccccHHHHHcC
Confidence            9999999     99999995     8888875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-41  Score=297.37  Aligned_cols=225  Identities=23%  Similarity=0.225  Sum_probs=179.1

Q ss_pred             HhhccccccCCccccceeeecceee--cCCCcEEEEEEeccccchh---HHHHHHH-hhCC-CCCcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAV--SRNLTVVAVKARRYMASQT---KLEEEIL-LKSS-SHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l-~h~niv~~~~~~~~~~~~  132 (304)
                      .+|++.+.||+|+||.||++.+++.  ..+++.||||+++......   .+.+|+. ++++ +|||||+++|++.+.+..
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            4788899999999999999987653  2466899999998654433   5666776 8887 799999999999888555


Q ss_pred             eEEEEeecCCCChhhHhhhcC-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeee
Q 046594          133 RCLVFEFMQRGSLRWNLREKG-----------------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILL  195 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~-----------------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill  195 (304)
                       ++|||||++|+|.++++...                 ..+++..+..++.||++||+|||..   +++||||||+|||+
T Consensus       103 -~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~  178 (311)
T d1t46a_         103 -LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL  178 (311)
T ss_dssp             -EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             -EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccccc
Confidence             99999999999999987643                 1589999999999999999999765   89999999999999


Q ss_pred             CCCCCeeEcccccccccCCCCC----Cccccc----------Ccccc--ccccc--------C----CCCc---------
Q 046594          196 DELCNAKLAGFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND--------F----VGGQ---------  238 (304)
Q Consensus       196 ~~~~~~kl~Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S--------~----~~~~---------  238 (304)
                      +.++.+|++|||+++.......    ....++          .+.++  +||||        +    +...         
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            9999999999999998765443    122223          23333  99999        1    1111         


Q ss_pred             ceeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          239 ECLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      .++....   +...+...+..+.+|+.+||+     .||++||||.+|+++|+++.+.
T Consensus       259 ~~i~~~~---~~~~~~~~~~~l~~Li~~cl~-----~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         259 KMIKEGF---RMLSPEHAPAEMYDIMKTCWD-----ADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHTC---CCCCCTTSCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCC---CCCCcccccHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHhhcc
Confidence            2333334   445556677889999999999     9999999999999999987554

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-41  Score=297.54  Aligned_cols=228  Identities=18%  Similarity=0.209  Sum_probs=177.8

Q ss_pred             HhhccccccCCccccceeeecceeecC--CCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCCCce
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSR--NLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRR  133 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~  133 (304)
                      .+|++.+.||+|+||.||++.+++...  +++.||||+++......   .+.+|+. +++++||||++++|++...+.. 
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~-   98 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT-   98 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC-
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce-
Confidence            578999999999999999999876532  35789999997654433   5777888 9999999999999999887555 


Q ss_pred             EEEEeecCCCChhhHhhhcC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEc
Q 046594          134 CLVFEFMQRGSLRWNLREKG---------GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLA  204 (304)
Q Consensus       134 ~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~  204 (304)
                      ++||||+++|+|.+++....         ..+++..+..++.|+++||.|||+.   +|+||||||+|||++.++++||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEe
Confidence            99999999999999887542         1579999999999999999999764   79999999999999999999999


Q ss_pred             ccccccccCCCCC----Cccccc----------Ccccc--ccccc------------CCCCc-----ceeccccCCCCCC
Q 046594          205 GFGAANYCSGGSN----RRNCEK----------TSEMA--EDIND------------FVGGQ-----ECLDQRLYIPNEK  251 (304)
Q Consensus       205 Dfgla~~~~~~~~----~~~~~~----------~~~~s--~DV~S------------~~~~~-----~~~~~~~~~~~~~  251 (304)
                      |||+|+.......    ....++          ...++  +||||            .+...     ++...........
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~  255 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD  255 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred             ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            9999987754433    111222          22223  89999            11111     1111111001234


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhh
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQL  296 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~  296 (304)
                      .+..++..+.+++.+||+     .||++|||+.+|+++|++..+.
T Consensus       256 ~p~~~~~~l~~li~~cl~-----~~P~~RPs~~~il~~L~~~~~~  295 (308)
T d1p4oa_         256 KPDNCPDMLFELMRMCWQ-----YNPKMRPSFLEIISSIKEEMEP  295 (308)
T ss_dssp             CCTTCCHHHHHHHHHHTC-----SSGGGSCCHHHHHHHHGGGSCT
T ss_pred             CcccchHHHHHHHHHHcC-----CChhHCcCHHHHHHHHHHhcCC
Confidence            556677899999999999     9999999999999999887553

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3e-41  Score=302.38  Aligned_cols=217  Identities=13%  Similarity=0.065  Sum_probs=170.2

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHH---HHHH-hhCCCCCcccceeeeeeCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLE---EEIL-LKSSSHLNIVTLLGYPQDG  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~---~e~~-l~~l~h~niv~~~~~~~~~  129 (304)
                      +..|++.+.||+|+||.||++.++   .+|+.||||++......     ..+.   ++.. ++.++|||||++++++.+.
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~---~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~   79 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP   79 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred             HHhCeeeeEEecCCCeEEEEEEEC---CCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEC
Confidence            357999999999999999999986   45799999998643221     1222   2344 7788999999999999887


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                       +.+|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+.   +|+||||||+|||++.+|.+||+|||+|
T Consensus        80 -~~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla  154 (364)
T d1omwa3          80 -DKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA  154 (364)
T ss_dssp             -SEEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTC
T ss_pred             -CEEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeecee
Confidence             45599999999999999998876 799999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCCCccccc-----------Ccccc--ccccc--------------CCCCc-----ceeccccCCCCCCcchHHH
Q 046594          210 NYCSGGSNRRNCEK-----------TSEMA--EDIND--------------FVGGQ-----ECLDQRLYIPNEKFKITSL  257 (304)
Q Consensus       210 ~~~~~~~~~~~~~~-----------~~~~s--~DV~S--------------~~~~~-----~~~~~~~~~~~~~~~~~~~  257 (304)
                      +...........|+           ...++  +||||              |....     .+..... .....++...+
T Consensus       155 ~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~s  233 (364)
T d1omwa3         155 CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-TMAVELPDSFS  233 (364)
T ss_dssp             EECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSS-SCCCCCCSSSC
T ss_pred             eecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-cCCCCCCCCCC
Confidence            98766555444444           12233  89999              22211     1111111 11334556677


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCCC-----HHHHHHH
Q 046594          258 AKLGDIEKWCISCCSNIEGNENHPK-----IVDVLSG  289 (304)
Q Consensus       258 ~~l~~l~~~cl~~~~~~~dp~~Rps-----~~~vl~~  289 (304)
                      +.+.+|+.+||+     .||++|||     +.|+++|
T Consensus       234 ~~~~~li~~~L~-----~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         234 PELRSLLEGLLQ-----RDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             HHHHHHHHHHTC-----SSTTTSTTTSSSTHHHHHTS
T ss_pred             HHHHHHHHHHcc-----cCHHHhCCCcccCHHHHHcC
Confidence            889999999999     99999999     6888875

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.4e-41  Score=294.08  Aligned_cols=216  Identities=20%  Similarity=0.224  Sum_probs=172.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----hhHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----QTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ++.|++.+.||+|+||.||++.++   .+|+.||||+++....     ...+.+|+. ++.++||||+++++++.+. +.
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-~~   78 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSR---HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA-QQ   78 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS-SE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEEC---CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeC-Ce
Confidence            468999999999999999999986   4579999999875322     126777777 9999999999999999987 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||++||+|.+++.... .+++..+..++.|++.||+|||+   ++|+||||||+|||++.+|.+||+|||+|+..
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~  154 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV  154 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             eeeEeeecCCccccccccccc-cccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEe
Confidence            599999999999999988776 78999999999999999999965   48999999999999999999999999999887


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ..... ..+|+          ...++  +||||              |....  +.....+ .....+|...++.+.+++
T Consensus       155 ~~~~~-~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li  232 (316)
T d1fota_         155 PDVTY-TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL-NAELRFPPFFNEDVKDLL  232 (316)
T ss_dssp             SSCBC-CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-HCCCCCCTTSCHHHHHHH
T ss_pred             ccccc-cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHH-cCCCCCCCCCCHHHHHHH
Confidence            55433 22333          22233  89999              22222  1111111 012345566778899999


Q ss_pred             HHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      .+||.     .||.+|+     |+.++++|
T Consensus       233 ~~~L~-----~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         233 SRLIT-----RDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             HHHTC-----SCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHhh-----hCHHhccccchhhHHHHHcC
Confidence            99999     9999996     89999876

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=8.6e-41  Score=289.09  Aligned_cols=224  Identities=18%  Similarity=0.204  Sum_probs=172.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-----HHHHHHH-hhCCCCCcccceeeeeeCCCC--
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQ--  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~e~~-l~~l~h~niv~~~~~~~~~~~--  131 (304)
                      .||++.+.||+|+||.||++.++   .+|+.||||+++.....+     .+.+|+. ++.++||||+++++++...+.  
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~   83 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDL---RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   83 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSS
T ss_pred             ceeEEeEEEeeCCCeEEEEEEEC---CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCC
Confidence            58999999999999999999986   457999999997543321     6778888 999999999999999876433  


Q ss_pred             -ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          132 -RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       132 -~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                       .+|+||||+++|+|.+++...+ ++++.++..++.|++.||+|||+.   ||+||||||+|||++.++..+++|||.+.
T Consensus        84 ~~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          84 PLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             ceEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhh
Confidence             3689999999999999988776 799999999999999999999764   89999999999999999999999999987


Q ss_pred             ccCCCCC-----Cccccc----------Ccccc--ccccc--------------CCCCc--ceecccc---CCCCCCcch
Q 046594          211 YCSGGSN-----RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRL---YIPNEKFKI  254 (304)
Q Consensus       211 ~~~~~~~-----~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~---~~~~~~~~~  254 (304)
                      .......     ....|+          ...++  +||||              |....  +.....+   ..+......
T Consensus       160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  239 (277)
T d1o6ya_         160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE  239 (277)
T ss_dssp             ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSS
T ss_pred             hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhcc
Confidence            6543322     222333          22233  99999              22222  1111111   000122334


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCC-CHHHHHHHHHHHHh
Q 046594          255 TSLAKLGDIEKWCISCCSNIEGNENHP-KIVDVLSGLKQVKQ  295 (304)
Q Consensus       255 ~~~~~l~~l~~~cl~~~~~~~dp~~Rp-s~~~vl~~L~~~~~  295 (304)
                      ..++.+.+++.+||+     +||++|| |+.++++.|.++.+
T Consensus       240 ~~s~~l~~li~~~L~-----~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         240 GLSADLDAVVLKALA-----KNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             SCCHHHHHHHHHHTC-----SSGGGSCSSHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHcc-----CCHhHCHhHHHHHHHHHHHHhC
Confidence            567889999999999     9999999 89999999988753

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-41  Score=292.48  Aligned_cols=212  Identities=17%  Similarity=0.184  Sum_probs=167.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--------HHHHHHH-hhCCC--CCcccceeeeeeC
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--------KLEEEIL-LKSSS--HLNIVTLLGYPQD  128 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~e~~-l~~l~--h~niv~~~~~~~~  128 (304)
                      .||++.+.||+|+||.||++.++   .+|+.||||++.......        .+..|+. +++++  ||||+++++++.+
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~   80 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRV---SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER   80 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CeEEEeEEEeeCCCeEEEEEEEC---CCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence            58999999999999999999886   457999999987542211        3445666 87775  8999999999988


Q ss_pred             CCCceEEEEeecCC-CChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCC-CCeeEccc
Q 046594          129 GLQRRCLVFEFMQR-GSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDEL-CNAKLAGF  206 (304)
Q Consensus       129 ~~~~~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~-~~~kl~Df  206 (304)
                      .+. +++||||+.+ +++.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.+ +.+||+||
T Consensus        81 ~~~-~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DF  155 (273)
T d1xwsa_          81 PDS-FVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF  155 (273)
T ss_dssp             SSE-EEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             CCe-EEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECcc
Confidence            844 4999999976 57888887766 799999999999999999999764   89999999999999854 79999999


Q ss_pred             ccccccCCCCCCccccc-----------Ccccc--ccccc--------------CCCCcceeccccCCCCCCcchHHHHH
Q 046594          207 GAANYCSGGSNRRNCEK-----------TSEMA--EDIND--------------FVGGQECLDQRLYIPNEKFKITSLAK  259 (304)
Q Consensus       207 gla~~~~~~~~~~~~~~-----------~~~~s--~DV~S--------------~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (304)
                      |+|+...........|+           ..+.+  +||||              |...+++.....     .++...+.+
T Consensus       156 G~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~~~-----~~~~~~s~~  230 (273)
T d1xwsa_         156 GSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV-----FFRQRVSSE  230 (273)
T ss_dssp             TTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCC-----CCSSCCCHH
T ss_pred             ccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhhccc-----CCCCCCCHH
Confidence            99987655444334444           22223  89999              333333333322     345556788


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          260 LGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       260 l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      +.+|+.+||+     .||++|||+.|+++|
T Consensus       231 ~~~li~~~L~-----~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         231 CQHLIRWCLA-----LRPSDRPTFEEIQNH  255 (273)
T ss_dssp             HHHHHHHHTC-----SSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHcc-----CCHhHCcCHHHHhcC
Confidence            9999999999     999999999999986

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-40  Score=291.60  Aligned_cols=218  Identities=17%  Similarity=0.155  Sum_probs=162.3

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch----hHHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .+|++++.||+|+||.||++.++   .+|+.||||+++.....    ..+.+|+. +++++||||+++++++.++ +.+|
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~-~~~~   77 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLY   77 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-TEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEEC---CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccc-ccee
Confidence            57999999999999999999986   45799999999754432    26777888 9999999999999999987 4559


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +||||+.++.+..........+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+....
T Consensus        78 iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~  154 (298)
T d1gz8a_          78 LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  154 (298)
T ss_dssp             EEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             EEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccC
Confidence            99999976444434344444799999999999999999999764   899999999999999999999999999987754


Q ss_pred             CCC--Cccccc-----------Ccccc--ccccc--------------CCCCc-----------------ceec-----c
Q 046594          215 GSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ-----------------ECLD-----Q  243 (304)
Q Consensus       215 ~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~-----------------~~~~-----~  243 (304)
                      ...  ....++           ..+.+  +||||              |....                 ....     +
T Consensus       155 ~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  234 (298)
T d1gz8a_         155 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP  234 (298)
T ss_dssp             CSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             CcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccc
Confidence            433  222233           22233  99999              21111                 0000     0


Q ss_pred             cc--CC---CCCC---cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          244 RL--YI---PNEK---FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       244 ~~--~~---~~~~---~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      ..  ..   ....   .....+..+.+|+.+||+     .||++|||+.|+++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~-----~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH-----YDPNKRISAKAALAH  283 (298)
T ss_dssp             TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             ccccccccccccchhhhccCCCHHHHHHHHHHcc-----CChhHCcCHHHHhCC
Confidence            00  00   0000   012335778999999999     999999999999987

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.9e-40  Score=294.46  Aligned_cols=216  Identities=16%  Similarity=0.162  Sum_probs=171.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccch-----hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-----TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      +.+|++++.||+|+||.||++.++   .+|+.||||++......     ..+.+|+. |+.++||||+++++++.+.. .
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~---~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-~  115 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS-N  115 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-E
T ss_pred             ccCeEEEEEeecCcCcEEEEEEEC---CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccc-c
Confidence            468999999999999999999986   45799999998643321     25667777 99999999999999998884 4


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +++||||+.+|+|.+++...+ .+++..+..++.||+.||.|||+.   +|+||||||+|||++.+|.+||+|||+|+..
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~  191 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cccccccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeec
Confidence            599999999999999998876 799999999999999999999765   7999999999999999999999999999987


Q ss_pred             CCCCCCccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHHHH
Q 046594          213 SGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGDIE  264 (304)
Q Consensus       213 ~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~  264 (304)
                      ..... ...|+          ...++  +||||              |....  ....... .....++...++.+.+++
T Consensus       192 ~~~~~-~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li  269 (350)
T d1rdqe_         192 KGRTW-TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPSHFSSDLKDLL  269 (350)
T ss_dssp             SSCBC-CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTCCHHHHHHH
T ss_pred             ccccc-cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHh-cCCCCCCccCCHHHHHHH
Confidence            65433 22233          22223  89999              32222  1111111 012244566778899999


Q ss_pred             HHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          265 KWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       265 ~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      .+||.     .||.+|+     |+.++++|
T Consensus       270 ~~~L~-----~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         270 RNLLQ-----VDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHHSC-----SCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHhh-----hCHHhccccccccHHHHHcC
Confidence            99999     9999994     89999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-40  Score=292.36  Aligned_cols=217  Identities=17%  Similarity=0.216  Sum_probs=163.5

Q ss_pred             HHhhcccc-ccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-h-hCCCCCcccceeeeeeC---CCCc
Q 046594           59 LKRRRMLK-SFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-L-KSSSHLNIVTLLGYPQD---GLQR  132 (304)
Q Consensus        59 ~~~~~~~~-~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l-~~l~h~niv~~~~~~~~---~~~~  132 (304)
                      ..+|++.+ .||+|+||.||+|.++   .+++.||||+++..   ..+++|+. + +..+|||||++++++.+   .+..
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~---~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~   83 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNK---RTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   83 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEEC---CCCCEEEEEEECCc---HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCE
Confidence            46899876 4999999999999986   45799999998642   23445554 4 45689999999999864   2356


Q ss_pred             eEEEEeecCCCChhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKG-GPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGA  208 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfgl  208 (304)
                      +|+|||||+||+|.+++...+ ..+++.++..|+.|++.||+|||+.   ||+||||||+|||++.   ++.+||+|||+
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccce
Confidence            799999999999999998764 3799999999999999999999765   8999999999999985   46799999999


Q ss_pred             ccccCCCCC-CcccccCcc----------cc--ccccc--------------CCCCc--cee---ccccCCCCCCcc---
Q 046594          209 ANYCSGGSN-RRNCEKTSE----------MA--EDIND--------------FVGGQ--ECL---DQRLYIPNEKFK---  253 (304)
Q Consensus       209 a~~~~~~~~-~~~~~~~~~----------~s--~DV~S--------------~~~~~--~~~---~~~~~~~~~~~~---  253 (304)
                      |+....... ....|+..+          ++  +||||              |....  ...   ..........++   
T Consensus       161 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~  240 (335)
T d2ozaa1         161 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  240 (335)
T ss_dssp             CEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTH
T ss_pred             eeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcc
Confidence            987765444 333444222          22  89999              21111  111   111111111222   


Q ss_pred             -hHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          254 -ITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       254 -~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                       ...++++.+|+.+||+     .||++|||+.|+++|
T Consensus       241 ~~~~s~~~~~li~~~L~-----~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         241 WSEVSEEVKMLIRNLLK-----TEPTQRMTITEFMNH  272 (335)
T ss_dssp             HHHSCHHHHHHHHHHSC-----SSTTTSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHcc-----CChhHCcCHHHHHcC
Confidence             3457889999999999     999999999999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.3e-40  Score=286.65  Aligned_cols=216  Identities=19%  Similarity=0.171  Sum_probs=163.4

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      .||++++.||+|+||+||++.++    +|+.||||+++......    .+.+|+. |++++||||+++++++.+.+.. +
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~-~   76 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL-V   76 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCE-E
T ss_pred             CCceeccEEecCCCcEEEEEEeC----CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCce-e
Confidence            58999999999999999999874    57999999997654332    7778888 9999999999999999988555 9


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +++||+.++.+..+.... +.+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        77 i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~  152 (286)
T d1ob3a_          77 LVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (286)
T ss_dssp             EEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             EEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceeccc
Confidence            999999876665555444 4899999999999999999999864   899999999999999999999999999987654


Q ss_pred             CCC--Cccccc-----------Ccccc--ccccc--------------CCCCc--ce-----------------------
Q 046594          215 GSN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ--EC-----------------------  240 (304)
Q Consensus       215 ~~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~--~~-----------------------  240 (304)
                      ...  ....++           ...++  +||||              |....  +.                       
T Consensus       153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  232 (286)
T d1ob3a_         153 PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP  232 (286)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             CccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhh
Confidence            322  111111           22333  99999              21110  00                       


Q ss_pred             -ecccc----CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          241 -LDQRL----YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       241 -~~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                       .+...    ..+...+....++.+.+++.+||+     .||++|||+.|+++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~-----~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK-----LDPNQRITAKQALEH  281 (286)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTC-----SSTTTSCCHHHHHTS
T ss_pred             hcccccccccCcchhhhcccCCHHHHHHHHHHcc-----CChhHCcCHHHHhcC
Confidence             00000    000112233456789999999999     999999999999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-41  Score=294.09  Aligned_cols=216  Identities=18%  Similarity=0.164  Sum_probs=169.0

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccc-----h-hHHHHHHH-hhCCCCCcccceeeeeeCCCCc
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMAS-----Q-TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQR  132 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~-----~-~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~  132 (304)
                      ..|++.+.||+|+||+||++.++   .+++.||||+++....     . ..+.|+.. .+.++||||+++++++.++ +.
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~---~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~-~~   77 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFK---KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK-EN   77 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS-SE
T ss_pred             CCeEEeeEEecCCCcEEEEEEEC---CCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccC-Cc
Confidence            47999999999999999999986   4579999999974321     1 14445555 5578999999999999988 45


Q ss_pred             eEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          133 RCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       133 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      +|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        78 ~yivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~  153 (320)
T d1xjda_          78 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN  153 (320)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             eeEEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhc
Confidence            599999999999999998776 799999999999999999999765   8999999999999999999999999999876


Q ss_pred             CCCCC--Cccccc----------Ccccc--ccccc--------------CCCCc--ceeccccCCCCCCcchHHHHHHHH
Q 046594          213 SGGSN--RRNCEK----------TSEMA--EDIND--------------FVGGQ--ECLDQRLYIPNEKFKITSLAKLGD  262 (304)
Q Consensus       213 ~~~~~--~~~~~~----------~~~~s--~DV~S--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  262 (304)
                      .....  ....|+          ...++  +||||              |....  ++..... .....+|...+..+.+
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~-~~~~~~p~~~s~~~~d  232 (320)
T d1xjda_         154 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR-MDNPFYPRWLEKEAKD  232 (320)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHHH
T ss_pred             ccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCccCCHHHHH
Confidence            54433  333444          22233  99999              22211  1111111 1123456667788999


Q ss_pred             HHHHhccccCCCCCCCCCCCHH-HHHHH
Q 046594          263 IEKWCISCCSNIEGNENHPKIV-DVLSG  289 (304)
Q Consensus       263 l~~~cl~~~~~~~dp~~Rps~~-~vl~~  289 (304)
                      |+.+||+     .||++|||+. ++++|
T Consensus       233 li~~~L~-----~dP~~R~s~~~~l~~h  255 (320)
T d1xjda_         233 LLVKLFV-----REPEKRLGVRGDIRQH  255 (320)
T ss_dssp             HHHHHSC-----SSGGGSBTTBSCGGGS
T ss_pred             HHHHhcc-----cCCCCCcCHHHHHHhC
Confidence            9999999     9999999995 77653

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-40  Score=288.38  Aligned_cols=213  Identities=19%  Similarity=0.112  Sum_probs=158.1

Q ss_pred             cccccCCccccceeeecceeecCCCcEEEEEEeccccch-------hHHHHHHH-hhCCCCCcccceeeeeeCCCCceEE
Q 046594           64 MLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ-------TKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCL  135 (304)
Q Consensus        64 ~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~l  135 (304)
                      .++.||+|+||+||++.++   .+|+.||||+++.....       ..+.+|+. +++++|||||++++++.+++. +|+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~-~~i   77 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDK---NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN-ISL   77 (299)
T ss_dssp             EEEEEEEETTEEEEEEECS---SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC-CEE
T ss_pred             cceEeccCcCeEEEEEEEC---CCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCc-eee
Confidence            4678999999999999987   35799999998654322       15667787 999999999999999998855 599


Q ss_pred             EEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCCC
Q 046594          136 VFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       136 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~~  215 (304)
                      ||||++++++..+.... ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.....
T Consensus        78 vmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~  153 (299)
T d1ua2a_          78 VFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  153 (299)
T ss_dssp             EEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             hhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCC
Confidence            99999987766555444 3799999999999999999999764   8999999999999999999999999999876554


Q ss_pred             CC--Cccccc-----------Ccccc--ccccc--------------CCCCc--c----ee-----------ccccC---
Q 046594          216 SN--RRNCEK-----------TSEMA--EDIND--------------FVGGQ--E----CL-----------DQRLY---  246 (304)
Q Consensus       216 ~~--~~~~~~-----------~~~~s--~DV~S--------------~~~~~--~----~~-----------~~~~~---  246 (304)
                      ..  ....++           ...++  +||||              |....  +    +.           .....   
T Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~  233 (299)
T d1ua2a_         154 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD  233 (299)
T ss_dssp             CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred             cccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccch
Confidence            33  222333           22233  89999              22111  0    00           00000   


Q ss_pred             ----CCCCCc-----chHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          247 ----IPNEKF-----KITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       247 ----~~~~~~-----~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                          ......     ....++.+.+|+.+||+     .||++|||+.|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~-----~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         234 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFL-----FNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHC-----SSTTTSCCHHHHHTS
T ss_pred             hhhhccCCCCChHHhcccCCHHHHHHHHHHcc-----CChhhCcCHHHHhCC
Confidence                000001     12345789999999999     999999999999986

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-39  Score=280.47  Aligned_cols=217  Identities=19%  Similarity=0.165  Sum_probs=168.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCCCceE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~  134 (304)
                      +||++++.||+|+||+||++.++   .+++.||||+++......    .+.+|+. ++.++||||+++++++.+.... +
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~-~   77 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNR---ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL-T   77 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE-E
T ss_pred             CCCEeeeEEecCcCeEEEEEEEC---CCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccce-e
Confidence            58999999999999999999986   467999999987554322    6677788 9999999999999999988554 9


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccccCC
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANYCSG  214 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~~~  214 (304)
                      +++|++.+++|..++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||.++....
T Consensus        78 iv~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~  153 (292)
T d1unla_          78 LVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             EEEECCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEeeecccccccccccccc-ccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccC
Confidence            9999999988888776655 899999999999999999999764   899999999999999999999999999987765


Q ss_pred             CCC--Cccccc-----------Ccccc--ccccc------------CC---CCc------------------------ce
Q 046594          215 GSN--RRNCEK-----------TSEMA--EDIND------------FV---GGQ------------------------EC  240 (304)
Q Consensus       215 ~~~--~~~~~~-----------~~~~s--~DV~S------------~~---~~~------------------------~~  240 (304)
                      ...  ....++           ..+.+  +||||            .+   ...                        ..
T Consensus       154 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (292)
T d1unla_         154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             CCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhc
Confidence            443  111111           22233  89999            11   000                        00


Q ss_pred             ec----c--ccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          241 LD----Q--RLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       241 ~~----~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                      .+    +  .............+..+.+|+.+||+     .||.+|||+.|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~-----~dP~~R~sa~e~L~H  283 (292)
T d1unla_         234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLK-----CNPVQRISAEEALQH  283 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSC-----SSGGGSCCHHHHTTS
T ss_pred             ccccccccccccchhhhccccCCHHHHHHHHHHcc-----CChhHCcCHHHHhcC
Confidence            00    0  00000122334456789999999999     999999999999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-39  Score=281.03  Aligned_cols=220  Identities=20%  Similarity=0.176  Sum_probs=162.1

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hh---CCCCCcccceeeeeeC---
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LK---SSSHLNIVTLLGYPQD---  128 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~---~l~h~niv~~~~~~~~---  128 (304)
                      .+|++++.||+|+||.||++.+..+  +++.||||+++......    .+.+|+. ++   ..+||||++++++|..   
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~--~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CCEEEEEEEecccCeEEEEEEEECC--CCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            6899999999999999999987532  35789999987543322    3334443 44   4589999999999853   


Q ss_pred             -CCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          129 -GLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       129 -~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                       ....++++|||++++++..........+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg  161 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG  161 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchh
Confidence             33457999999998777666555555899999999999999999999765   89999999999999999999999999


Q ss_pred             cccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCc--c---------------eec-
Q 046594          208 AANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQ--E---------------CLD-  242 (304)
Q Consensus       208 la~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~--~---------------~~~-  242 (304)
                      +++....... ....|+          ...++  +||||              |....  +               ... 
T Consensus       162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (305)
T d1blxa_         162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  241 (305)
T ss_dssp             SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred             hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence            9987654433 333344          22233  99999              22111  0               000 


Q ss_pred             ----------cccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 ----------QRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 ----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                .....+...+....++.+.+|+.+||+     +||++|||+.|+++|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~-----~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT-----FNPAKRISAYSALSH  293 (305)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSC-----SSTTTSCCHHHHHTS
T ss_pred             cccchhhhhccccccchhhccccCCHHHHHHHHHHCc-----CChhHCcCHHHHhcC
Confidence                      000000112334456788999999999     999999999999886

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-38  Score=280.55  Aligned_cols=223  Identities=17%  Similarity=0.144  Sum_probs=161.6

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCCC---
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDGL---  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~~---  130 (304)
                      ..||++.+.||+|+||.||+|.++   .+|+.||||+++......    .+.+|+. |+.++|||||+++++|...+   
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~   93 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDG---RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD   93 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEET---TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT
T ss_pred             CCcEEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccc
Confidence            358999999999999999999886   458999999997543322    5667777 99999999999999987653   


Q ss_pred             --CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          131 --QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       131 --~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                        ..+|+||||+ +++|..+++..  .+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.+|++|||+
T Consensus        94 ~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~  167 (346)
T d1cm8a_          94 DFTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL  167 (346)
T ss_dssp             TCCCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             ccceEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccc
Confidence              2469999999 55888777654  699999999999999999999765   899999999999999999999999999


Q ss_pred             ccccCCCCC--Cccccc--------Ccccc--ccccc--------------CCCCcc-----------------ee----
Q 046594          209 ANYCSGGSN--RRNCEK--------TSEMA--EDIND--------------FVGGQE-----------------CL----  241 (304)
Q Consensus       209 a~~~~~~~~--~~~~~~--------~~~~s--~DV~S--------------~~~~~~-----------------~~----  241 (304)
                      |+.......  ..+..+        ....+  +||||              |.....                 ..    
T Consensus       168 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (346)
T d1cm8a_         168 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ  247 (346)
T ss_dssp             CEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred             eeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhc
Confidence            988765443  111111        12223  99999              211110                 00    


Q ss_pred             ----------cccc-CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHh
Q 046594          242 ----------DQRL-YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQ  295 (304)
Q Consensus       242 ----------~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~  295 (304)
                                .+.. ...........++.+.+|+.+||.     .||.+|||+.|+++|  |+.+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~-----~dP~~R~ta~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         248 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV-----LDAEQRVTAGEALAHPYFESLHD  309 (346)
T ss_dssp             CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC-----SSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             chhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCc-----CChhHCcCHHHHhcChhhCcCCC
Confidence                      0000 000011223446778999999999     999999999999987  665543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=7e-38  Score=277.08  Aligned_cols=214  Identities=16%  Similarity=0.171  Sum_probs=161.5

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCC-CCcccceeeeeeCC-CCceEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSS-HLNIVTLLGYPQDG-LQRRCLV  136 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~-h~niv~~~~~~~~~-~~~~~lv  136 (304)
                      .+|++++.||+|+||+||+|.++   .+|+.||||+++.... ..+.+|+. |++++ ||||+++++++... ...+++|
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~---~~~~~vAiK~i~~~~~-~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINI---TNNEKVVVKILKPVKK-KKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSSCH-HHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEECHHHH-HHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence            58999999999999999999986   4579999999976443 35666776 88885 99999999998754 3456999


Q ss_pred             EeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEcccccccccCCC
Q 046594          137 FEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANYCSGG  215 (304)
Q Consensus       137 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~~~~~~  215 (304)
                      |||+++++|.++.+    .+++..+..++.||+.||+|||+.   ||+||||||+|||++.++ .+||+|||+|+.....
T Consensus       111 ~e~~~~~~L~~~~~----~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         111 FEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             EECCCSCBGGGTTT----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             EeecCCCcHHHHhc----CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            99999999987643    699999999999999999999765   899999999999998655 6999999999877654


Q ss_pred             CC-Cccccc-----------Ccccc--ccccc--------------CCCCcc----------------------------
Q 046594          216 SN-RRNCEK-----------TSEMA--EDIND--------------FVGGQE----------------------------  239 (304)
Q Consensus       216 ~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~~----------------------------  239 (304)
                      .. ....++           ...++  +||||              |.....                            
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~  263 (328)
T d3bqca1         184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL  263 (328)
T ss_dssp             CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccccc
Confidence            43 222222           11223  89999              111110                            


Q ss_pred             ------eeccccC-----CCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          240 ------CLDQRLY-----IPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       240 ------~~~~~~~-----~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                            .......     ..........++++.+|+.+||.     .||++|||+.|+++|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~-----~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-----YDHQSRLTAREAMEH  319 (328)
T ss_dssp             CGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             CcccchhcccccccchhhcccccccccCCHHHHHHHHHHcc-----CChhHCcCHHHHhcC
Confidence                  0000000     00111223456789999999999     999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-38  Score=281.56  Aligned_cols=221  Identities=15%  Similarity=0.112  Sum_probs=160.7

Q ss_pred             hhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCC-----CCceE
Q 046594           61 RRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDG-----LQRRC  134 (304)
Q Consensus        61 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~-----~~~~~  134 (304)
                      +|+..+.||+|+||+||+|.++   .+|+.||||++.....  ...+|+. |++++||||+++++++...     ..+++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~--~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~   95 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKR--FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN   95 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCSS--SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEEC---CCCCEEEEEEECccch--HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEE
Confidence            5899999999999999999986   4579999999975432  2335666 9999999999999998543     23468


Q ss_pred             EEEeecCCCChhhHhh--hcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC-CeeEcccccccc
Q 046594          135 LVFEFMQRGSLRWNLR--EKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC-NAKLAGFGAANY  211 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfgla~~  211 (304)
                      +|||||+++.+..+..  .....+++..+..++.|++.||+|||+   .||+||||||+|||++.++ .+||+|||+++.
T Consensus        96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~  172 (350)
T d1q5ka_          96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  172 (350)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred             EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhh
Confidence            9999998754333332  223379999999999999999999965   4899999999999999775 899999999987


Q ss_pred             cCCCCC-Cccccc-----------Ccccc--ccccc--------------CCCCc--c----------------------
Q 046594          212 CSGGSN-RRNCEK-----------TSEMA--EDIND--------------FVGGQ--E----------------------  239 (304)
Q Consensus       212 ~~~~~~-~~~~~~-----------~~~~s--~DV~S--------------~~~~~--~----------------------  239 (304)
                      ...... ....++           ...++  +||||              |....  +                      
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~  252 (350)
T d1q5ka_         173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP  252 (350)
T ss_dssp             CCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_pred             ccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhcc
Confidence            755443 222333           22233  99999              22211  0                      


Q ss_pred             -eeccccCCC-----CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHH
Q 046594          240 -CLDQRLYIP-----NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVK  294 (304)
Q Consensus       240 -~~~~~~~~~-----~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~  294 (304)
                       ..+..+...     ........++.+.+|+.+||+     .||++|||+.|+++|  ++.+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~-----~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE-----YTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSC-----SSGGGSCCHHHHHTSGGGGGGG
T ss_pred             chhhccccccccCchhhhcccCCCHHHHHHHHHHcc-----CChhHCcCHHHHhcCHhhcccc
Confidence             000000000     001123456789999999999     999999999999986  55443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-37  Score=277.85  Aligned_cols=223  Identities=18%  Similarity=0.180  Sum_probs=161.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh---HHHHHHH-hhCCCCCcccceeeeeeCCC----C
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT---KLEEEIL-LKSSSHLNIVTLLGYPQDGL----Q  131 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~e~~-l~~l~h~niv~~~~~~~~~~----~  131 (304)
                      .||++++.||+|+||+||+|.++   .+|+.||||+++......   .+.+|+. |+.++||||+++++++....    .
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDN---VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEET---TTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             CCeEEEEEEeeccCeEEEEEEEC---CCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence            58999999999999999999876   457999999997554332   5667777 99999999999999986542    2


Q ss_pred             ceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          132 RRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       132 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      . +++++|+.+|+|.+++...  .+++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||+++.
T Consensus        85 ~-~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~  158 (345)
T d1pmea_          85 D-VYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV  158 (345)
T ss_dssp             C-EEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             e-EEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceee
Confidence            3 4555667789999999765  599999999999999999999765   899999999999999999999999999986


Q ss_pred             cCCCCC-----Cccccc-----------Ccccc--ccccc--------------CCCCcc-----------------e--
Q 046594          212 CSGGSN-----RRNCEK-----------TSEMA--EDIND--------------FVGGQE-----------------C--  240 (304)
Q Consensus       212 ~~~~~~-----~~~~~~-----------~~~~s--~DV~S--------------~~~~~~-----------------~--  240 (304)
                      ......     ....++           ...++  +||||              |.....                 .  
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  238 (345)
T d1pmea_         159 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN  238 (345)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred             ccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhh
Confidence            543221     111122           12222  89999              211110                 0  


Q ss_pred             ------------ecccc-CCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH--HHHHHhh
Q 046594          241 ------------LDQRL-YIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG--LKQVKQL  296 (304)
Q Consensus       241 ------------~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~--L~~~~~~  296 (304)
                                  ..+.. ..+........+..+.+|+.+||+     .||.+|||+.|+++|  |+.....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~-----~dP~~R~ta~e~L~hpf~~~~~~~  304 (345)
T d1pmea_         239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLT-----FNPHKRIEVEQALAHPYLEQYYDP  304 (345)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSC-----SSTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             hhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHcc-----CChhHCcCHHHHhcCHhhccCCCC
Confidence                        00000 000000112334678999999999     999999999999987  5544443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-37  Score=271.62  Aligned_cols=224  Identities=15%  Similarity=0.125  Sum_probs=167.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCcccceeeeeeCCCCceEEEEe
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIVTLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e  138 (304)
                      .||++.+.||+|+||.||++.+.   .+|+.||||++........+..|.. ++.++|+|++..++.+...++..++|||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDI---AAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEEC---CCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            58999999999999999999876   4578999999887655556667777 9999888877776666555566699999


Q ss_pred             ecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC---CCCeeEcccccccccCCC
Q 046594          139 FMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE---LCNAKLAGFGAANYCSGG  215 (304)
Q Consensus       139 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfgla~~~~~~  215 (304)
                      |+ +++|.+.+......+++..+..++.|++.||+|||+.   +|+||||||+|||++.   +..++|+|||+|+.....
T Consensus        84 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_          84 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred             Ec-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence            99 4578777776666899999999999999999999764   8999999999999863   557999999999987543


Q ss_pred             CC---------CcccccCcc----------cc--ccccc--------------CCCCc--ce-------eccccCCCCCC
Q 046594          216 SN---------RRNCEKTSE----------MA--EDIND--------------FVGGQ--EC-------LDQRLYIPNEK  251 (304)
Q Consensus       216 ~~---------~~~~~~~~~----------~s--~DV~S--------------~~~~~--~~-------~~~~~~~~~~~  251 (304)
                      ..         ....|+..+          ++  +||||              |....  ..       ....+..+...
T Consensus       160 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (299)
T d1ckia_         160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV  239 (299)
T ss_dssp             TTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHH
T ss_pred             ccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhH
Confidence            32         122333222          33  99999              21111  00       00111000111


Q ss_pred             cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHh
Q 046594          252 FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQ  295 (304)
Q Consensus       252 ~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~  295 (304)
                      ....+++++.+++.+||+     .||++||++.++.+.|+.+..
T Consensus       240 ~~~~~p~~~~~li~~cl~-----~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         240 LCKGYPSEFATYLNFCRS-----LRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HTTTSCHHHHHHHHHHHH-----SCTTCCCCHHHHHHHHHHHHH
T ss_pred             hccCCCHHHHHHHHHHcc-----CChhHCcCHHHHHHHHHHHHH
Confidence            223456889999999999     999999999999998887754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=281.20  Aligned_cols=220  Identities=16%  Similarity=0.134  Sum_probs=170.5

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEecccc------chhHHHHHHH-hhCCCC-CcccceeeeeeCCC
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMA------SQTKLEEEIL-LKSSSH-LNIVTLLGYPQDGL  130 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~-l~~l~h-~niv~~~~~~~~~~  130 (304)
                      +.+|++.+.||+|+||.||++.+.....+|+.||||.++...      ....+.+|+. +++++| |||+++++++.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            368999999999999999999876544578999999986432      1225666777 999966 89999999998885


Q ss_pred             CceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccccc
Q 046594          131 QRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAAN  210 (304)
Q Consensus       131 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~  210 (304)
                       .++++|||+.+|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus       103 -~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         103 -KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             -EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             -ceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchh
Confidence             4599999999999999998877 788999999999999999999764   89999999999999999999999999998


Q ss_pred             ccCCCCC---Cccccc------------Ccccc--ccccc--------------CCCCc------ceeccccCCCCCCcc
Q 046594          211 YCSGGSN---RRNCEK------------TSEMA--EDIND--------------FVGGQ------ECLDQRLYIPNEKFK  253 (304)
Q Consensus       211 ~~~~~~~---~~~~~~------------~~~~s--~DV~S--------------~~~~~------~~~~~~~~~~~~~~~  253 (304)
                      .......   ....++            ...++  +||||              |....      .+..... .....++
T Consensus       178 ~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~-~~~~~~~  256 (322)
T d1vzoa_         178 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL-KSEPPYP  256 (322)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH-HCCCCCC
T ss_pred             hhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc-cCCCCCc
Confidence            7643322   222222            12233  89999              22211      1111111 1133456


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCCCC-----CHHHHHHH
Q 046594          254 ITSLAKLGDIEKWCISCCSNIEGNENHP-----KIVDVLSG  289 (304)
Q Consensus       254 ~~~~~~l~~l~~~cl~~~~~~~dp~~Rp-----s~~~vl~~  289 (304)
                      ...+..+.+++.+||+     +||++||     |+.|+++|
T Consensus       257 ~~~s~~~~~li~~~l~-----~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         257 QEMSALAKDLIQRLLM-----KDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             TTSCHHHHHHHHHHTC-----SSGGGSTTSSTTTHHHHHTS
T ss_pred             ccCCHHHHHHHHHHcc-----cCHHHcCCCCcccHHHHHcC
Confidence            6788999999999999     9999999     47889875

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-37  Score=271.33  Aligned_cols=148  Identities=20%  Similarity=0.155  Sum_probs=121.8

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC-----
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG-----  129 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~-----  129 (304)
                      .||++.+.||+|+||+||+|.++   .+|+.||||++......+    .+.+|+. |++++||||+++++++...     
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~   86 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHR---KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN   86 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred             CCEEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence            69999999999999999999886   468999999986543332    5667777 9999999999999988553     


Q ss_pred             --CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccc
Q 046594          130 --LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFG  207 (304)
Q Consensus       130 --~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  207 (304)
                        ++.+|+||||++++.+..... ....+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.+||+|||
T Consensus        87 ~~~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg  162 (318)
T d3blha1          87 RCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG  162 (318)
T ss_dssp             ----CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred             ccCceEEEEEeccCCCccchhhh-cccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecc
Confidence              235699999998866554443 344899999999999999999999764   89999999999999999999999999


Q ss_pred             cccccCC
Q 046594          208 AANYCSG  214 (304)
Q Consensus       208 la~~~~~  214 (304)
                      +++....
T Consensus       163 ~~~~~~~  169 (318)
T d3blha1         163 LARAFSL  169 (318)
T ss_dssp             TCEECCC
T ss_pred             eeeeccc
Confidence            9986653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.1e-36  Score=265.25  Aligned_cols=225  Identities=15%  Similarity=0.156  Sum_probs=172.2

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCC-CcccceeeeeeCCCCceEEEE
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSH-LNIVTLLGYPQDGLQRRCLVF  137 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h-~niv~~~~~~~~~~~~~~lv~  137 (304)
                      .||++.+.||+|+||.||++.+.   .+|+.||||+++.......+++|.. ++.++| +|++.+++++..+... ++||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~-~~vm   80 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNL---LNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHN-VLVI   80 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEET---TTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEE-EEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCcc-EEEE
Confidence            58999999999999999999976   4579999999876655556777777 888865 8999999998887544 9999


Q ss_pred             eecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCC-----CCCeeEccccccccc
Q 046594          138 EFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDE-----LCNAKLAGFGAANYC  212 (304)
Q Consensus       138 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~-----~~~~kl~Dfgla~~~  212 (304)
                      ||+ +++|.+++...+..+++.++..++.|++.||+|||+   +||+||||||+|||++.     ++.+||+|||+|+..
T Consensus        81 e~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~  156 (293)
T d1csna_          81 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  156 (293)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             Eec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence            999 679999998877689999999999999999999965   48999999999999974     578999999999876


Q ss_pred             CCCCC---------CcccccCccc----------c--ccccc--------------CCCCc---------ceeccccCCC
Q 046594          213 SGGSN---------RRNCEKTSEM----------A--EDIND--------------FVGGQ---------ECLDQRLYIP  248 (304)
Q Consensus       213 ~~~~~---------~~~~~~~~~~----------s--~DV~S--------------~~~~~---------~~~~~~~~~~  248 (304)
                      .....         ....|+..++          +  +||||              |....         .+.......+
T Consensus       157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~  236 (293)
T d1csna_         157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP  236 (293)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred             ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC
Confidence            54321         1223443333          2  89999              21111         0111111000


Q ss_pred             CCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 046594          249 NEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSGLKQVKQLF  297 (304)
Q Consensus       249 ~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~L~~~~~~~  297 (304)
                      ..+.....++++.+++..|+.     .+|++||++..+.+.|+.+.+..
T Consensus       237 ~~~l~~~~p~~l~~ii~~~~~-----~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         237 LRELCAGFPEEFYKYMHYARN-----LAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHH-----CCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hHHhcCCCCHHHHHHHHHHhc-----CCcccCcCHHHHHHHHHHHHHHc
Confidence            112223455789999999999     99999999999999998876543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-36  Score=271.37  Aligned_cols=216  Identities=21%  Similarity=0.228  Sum_probs=154.4

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC----
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG----  129 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~----  129 (304)
                      ++||++++.||+|+||+||++.++   .+|+.||||++.......    .+.+|+. +++++||||+++++++...    
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~---~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~   92 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDA---VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE   92 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEET---TTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred             cCCeEEEEEeecCcCeEEEEEEEC---CCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccc
Confidence            468999999999999999999986   357999999997543222    5667777 9999999999999998643    


Q ss_pred             -CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEccccc
Q 046594          130 -LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGA  208 (304)
Q Consensus       130 -~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgl  208 (304)
                       ...+|+||||+.+ ++.+.+..   .+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.++++|||+
T Consensus        93 ~~~~~~iv~Ey~~~-~l~~~~~~---~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~  165 (355)
T d2b1pa1          93 EFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             cCceeEEEEeccch-HHHHhhhc---CCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhh
Confidence             2567999999976 45444433   689999999999999999999765   899999999999999999999999999


Q ss_pred             ccccCCCCC-Cccccc----------Ccccc--ccccc--------------CCCCcc----------------------
Q 046594          209 ANYCSGGSN-RRNCEK----------TSEMA--EDIND--------------FVGGQE----------------------  239 (304)
Q Consensus       209 a~~~~~~~~-~~~~~~----------~~~~s--~DV~S--------------~~~~~~----------------------  239 (304)
                      ++....... ....++          ...++  +||||              |.....                      
T Consensus       166 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (355)
T d2b1pa1         166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  245 (355)
T ss_dssp             ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTS
T ss_pred             hhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHh
Confidence            887755443 222222          22222  99999              222110                      


Q ss_pred             ---------------------eeccccCCCCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          240 ---------------------CLDQRLYIPNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       240 ---------------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                                           .................+..+.+|+.+||.     .||++|||++|+++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~-----~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV-----IDPAKRISVDDALQH  311 (355)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC-----SSTTTSCCHHHHHTS
T ss_pred             hhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCc-----CChhHCcCHHHHhcC
Confidence                                 000000000111223456789999999999     999999999999976

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-37  Score=273.68  Aligned_cols=215  Identities=19%  Similarity=0.179  Sum_probs=158.6

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh----HHHHHHH-hhCCCCCcccceeeeeeCC-----
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT----KLEEEIL-LKSSSHLNIVTLLGYPQDG-----  129 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~-l~~l~h~niv~~~~~~~~~-----  129 (304)
                      .||++++.||+|+||+||+|.++   .+|+.||||+++......    .+.+|+. |+.++|||++++++++...     
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~   94 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDT---KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   94 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEET---TTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTT
T ss_pred             CCeEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecccccc
Confidence            58999999999999999999876   468999999997543322    5667777 9999999999999998643     


Q ss_pred             CCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCeeEcccccc
Q 046594          130 LQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNAKLAGFGAA  209 (304)
Q Consensus       130 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfgla  209 (304)
                      ... +++++|+.+|+|.+++...  ++++..+..++.|++.||+|||+.   ||+||||||+|||++.++.+|++|||++
T Consensus        95 ~~~-~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a  168 (348)
T d2gfsa1          95 FND-VYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA  168 (348)
T ss_dssp             CCC-CEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred             Cce-EEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchh
Confidence            233 6677788899999998654  699999999999999999999765   8999999999999999999999999999


Q ss_pred             cccCCCCCCccccc-----------Ccccc--ccccc--------------CCCCcc------eec--------------
Q 046594          210 NYCSGGSNRRNCEK-----------TSEMA--EDIND--------------FVGGQE------CLD--------------  242 (304)
Q Consensus       210 ~~~~~~~~~~~~~~-----------~~~~s--~DV~S--------------~~~~~~------~~~--------------  242 (304)
                      ........ ...++           ..+.+  +||||              |.....      +..              
T Consensus       169 ~~~~~~~~-~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~  247 (348)
T d2gfsa1         169 RHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  247 (348)
T ss_dssp             -CCTGGGS-SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCC
T ss_pred             cccCcccc-cccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhcc
Confidence            76644322 11111           22233  89999              222110      000              


Q ss_pred             --------ccc-CCCCCC---cchHHHHHHHHHHHHhccccCCCCCCCCCCCHHHHHHH
Q 046594          243 --------QRL-YIPNEK---FKITSLAKLGDIEKWCISCCSNIEGNENHPKIVDVLSG  289 (304)
Q Consensus       243 --------~~~-~~~~~~---~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps~~~vl~~  289 (304)
                              ..+ ..+...   .....+..+.+|+.+||.     .||.+|||+.|+++|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~-----~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV-----LDSDKRITAAQALAH  301 (348)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSC-----SSGGGSCCHHHHHTS
T ss_pred             chhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCc-----CChhhCcCHHHHhcC
Confidence                    000 000000   012345778999999999     999999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1e-31  Score=240.09  Aligned_cols=223  Identities=17%  Similarity=0.134  Sum_probs=154.7

Q ss_pred             HhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh-HHHHHHH-hhCCC-----------CCcccceeeee
Q 046594           60 KRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT-KLEEEIL-LKSSS-----------HLNIVTLLGYP  126 (304)
Q Consensus        60 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~-l~~l~-----------h~niv~~~~~~  126 (304)
                      +||++.+.||+|+||+||++.++   .+|+.||||+++...... .+.+|+. ++.++           |+||+++++++
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~---~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~   89 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDM---VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   89 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence            47999999999999999999876   468999999998654332 4555555 66554           67899999987


Q ss_pred             eCCC-CceEEEEeecCCCChh-hHh-hhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCC----
Q 046594          127 QDGL-QRRCLVFEFMQRGSLR-WNL-REKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELC----  199 (304)
Q Consensus       127 ~~~~-~~~~lv~e~~~~gsL~-~~l-~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~----  199 (304)
                      ...+ ...+++++++..+... ... ......+++..+..++.|++.||+|||+.  .||+||||||+|||++.++    
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~  167 (362)
T d1q8ya_          90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPEN  167 (362)
T ss_dssp             EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTT
T ss_pred             eeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCcccc
Confidence            6532 3446677766554332 222 22233889999999999999999999863  3899999999999998665    


Q ss_pred             --CeeEcccccccccCCCCCCccccc----------Ccccc--ccccc--------------CCCCcc------------
Q 046594          200 --NAKLAGFGAANYCSGGSNRRNCEK----------TSEMA--EDIND--------------FVGGQE------------  239 (304)
Q Consensus       200 --~~kl~Dfgla~~~~~~~~~~~~~~----------~~~~s--~DV~S--------------~~~~~~------------  239 (304)
                        .++++|||.+........ ...++          ...++  +||||              |.....            
T Consensus       168 ~~~~kl~dfg~s~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         168 LIQIKIADLGNACWYDEHYT-NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EEEEEECCCTTCEETTBCCC-SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             cceeeEeecccccccccccc-cccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence              399999999986654332 12222          22223  99999              111110            


Q ss_pred             ---e------------------ec-----cccCC-----------CCCCcchHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 046594          240 ---C------------------LD-----QRLYI-----------PNEKFKITSLAKLGDIEKWCISCCSNIEGNENHPK  282 (304)
Q Consensus       240 ---~------------------~~-----~~~~~-----------~~~~~~~~~~~~l~~l~~~cl~~~~~~~dp~~Rps  282 (304)
                         .                  .+     .....           ....++...+..+.+|+.+||+     .||.+|||
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~-----~dP~~Rpt  321 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ-----LDPRKRAD  321 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGC-----SSTTTCBC
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCC-----CChhHCcC
Confidence               0                  00     00000           0112335667889999999999     99999999


Q ss_pred             HHHHHHH--HHHH
Q 046594          283 IVDVLSG--LKQV  293 (304)
Q Consensus       283 ~~~vl~~--L~~~  293 (304)
                      +.|+++|  ++..
T Consensus       322 a~e~L~Hp~f~~~  334 (362)
T d1q8ya_         322 AGGLVNHPWLKDT  334 (362)
T ss_dssp             HHHHHTCGGGTTC
T ss_pred             HHHHhcCcccCCC
Confidence            9999986  5433

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.88  E-value=4.7e-23  Score=167.24  Aligned_cols=132  Identities=14%  Similarity=0.142  Sum_probs=101.0

Q ss_pred             ccccccCCccccceeeecceeecCCCcEEEEEEeccccch--------------------hHHHHHHH-hhCCCCCcccc
Q 046594           63 RMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQ--------------------TKLEEEIL-LKSSSHLNIVT  121 (304)
Q Consensus        63 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~--------------------~~~~~e~~-l~~l~h~niv~  121 (304)
                      -+.++||+|+||.||++.+    .+|+.||||+++.....                    .....|.. +.++.|.+++.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~----~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~   78 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYS----EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK   78 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEE----TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred             hhCCEeeeCcceEEEEEEC----CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcce
Confidence            4578999999999999876    36789999987532110                    02234555 88889999988


Q ss_pred             eeeeeeCCCCceEEEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeeCCCCCe
Q 046594          122 LLGYPQDGLQRRCLVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYSKPPIYHGNITSDNILLDELCNA  201 (304)
Q Consensus       122 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~~~~ivH~dlkp~Nill~~~~~~  201 (304)
                      .+++.    .. +++|||++++.+.+        ++......++.|++.+|+|||+.   ||+||||||+|||++++ .+
T Consensus        79 ~~~~~----~~-~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~  141 (191)
T d1zara2          79 VYAWE----GN-AVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GI  141 (191)
T ss_dssp             EEEEE----TT-EEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EE
T ss_pred             EEEec----CC-EEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CE
Confidence            87653    23 89999998865543        34445678999999999999764   89999999999999965 58


Q ss_pred             eEcccccccccCCC
Q 046594          202 KLAGFGAANYCSGG  215 (304)
Q Consensus       202 kl~Dfgla~~~~~~  215 (304)
                      +|+|||+|......
T Consensus       142 ~liDFG~a~~~~~~  155 (191)
T d1zara2         142 WIIDFPQSVEVGEE  155 (191)
T ss_dssp             EECCCTTCEETTST
T ss_pred             EEEECCCcccCCCC
Confidence            99999999876543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.48  E-value=3.9e-07  Score=75.29  Aligned_cols=141  Identities=11%  Similarity=0.043  Sum_probs=87.3

Q ss_pred             HHhhccccccCCccccceeeecceeecCCCcEEEEEEeccccchh--HHHHHHH-hhCCC-CCcccceeeeeeCCCCceE
Q 046594           59 LKRRRMLKSFGDSVEGLTLIKGDRAVSRNLTVVAVKARRYMASQT--KLEEEIL-LKSSS-HLNIVTLLGYPQDGLQRRC  134 (304)
Q Consensus        59 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~e~~-l~~l~-h~niv~~~~~~~~~~~~~~  134 (304)
                      +..|+..+..+.+..+.||+...     ++..+.+|+........  .+..|.. +..+. +--+.+++.+...++.. +
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~~-----~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~-~   86 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS-N   86 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE-E
T ss_pred             hhceEEEEcCCCCCCCcEEEEEe-----CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCce-E
Confidence            45677766654444567876542     35677888876544332  4555555 55442 32355667776666455 9


Q ss_pred             EEEeecCCCChhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 046594          135 LVFEFMQRGSLRWNLREKGGPLDWEKRLAIALQIDSANQMVCMYS-----------------------------------  179 (304)
Q Consensus       135 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~Lh~~~-----------------------------------  179 (304)
                      +||++++|.++.+.....   ..   ...++.++++.++.||+..                                   
T Consensus        87 lv~~~l~G~~~~~~~~~~---~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T d1j7la_          87 LLMSEADGVLCSEEYEDE---QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEEECCSSEEHHHHTTTC---SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGST
T ss_pred             EEEEeccccccccccccc---cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccc
Confidence            999999998776543221   11   1223444444455555321                                   


Q ss_pred             ---------------------CCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          180 ---------------------KPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       180 ---------------------~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                                           ...++|+|+.|.|||++.++...|.||+.+..
T Consensus       161 ~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                 12378999999999999876677999987754

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.94  E-value=1.5e-05  Score=65.08  Aligned_cols=74  Identities=14%  Similarity=0.053  Sum_probs=44.8

Q ss_pred             ccCCccc-cceeeecceeecCCCcEEEEEEeccccchhHHHHHHH-hhCCCC--CcccceeeeeeCCCCceEEEEeecCC
Q 046594           67 SFGDSVE-GLTLIKGDRAVSRNLTVVAVKARRYMASQTKLEEEIL-LKSSSH--LNIVTLLGYPQDGLQRRCLVFEFMQR  142 (304)
Q Consensus        67 ~lg~g~~-g~v~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h--~niv~~~~~~~~~~~~~~lv~e~~~~  142 (304)
                      .+..|.. +.||+...    ..+..+.+|........ .+..|.. ++.+..  -.+.+++++..+++.. ++||++++|
T Consensus        17 ~~~~G~s~~~v~r~~~----~~~~~~vlK~~~~~~~~-~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~-~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA----QGRPVLFVKTDLSGALN-ELQDEAARLSWLATTGVPCAAVLDVVTEAGRD-WLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC----TTSCCEEEEEECSCTTS-CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCE-EEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe----CCCCEEEEEeCCccCHh-HHHHHHHHHHHHHhcCCCCCceeeecccccce-EEEEEeeec
Confidence            3445544 45676554    34667888987654332 4444444 554422  2355677777766455 999999988


Q ss_pred             CChh
Q 046594          143 GSLR  146 (304)
Q Consensus       143 gsL~  146 (304)
                      .++.
T Consensus        91 ~~~~   94 (255)
T d1nd4a_          91 QDLL   94 (255)
T ss_dssp             EETT
T ss_pred             cccc
Confidence            6654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.82  E-value=7.7e-05  Score=65.11  Aligned_cols=31  Identities=23%  Similarity=0.309  Sum_probs=26.4

Q ss_pred             CCeeecCCCCCCeeeCCCCCeeEccccccccc
Q 046594          181 PPIYHGNITSDNILLDELCNAKLAGFGAANYC  212 (304)
Q Consensus       181 ~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~~  212 (304)
                      ..++|||+.|.|||++.++ +++.||..+..-
T Consensus       223 ~~LiHGDl~~gNIlv~~~~-~~vID~E~a~~G  253 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHE-TKVIDPEFAFYG  253 (392)
T ss_dssp             CEEECSCCCGGGEEECSSC-EEECCCTTCEEE
T ss_pred             cceeccCCcCCceeEcCCc-eEEechhhcccC
Confidence            4689999999999998764 899999887654

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.82  E-value=0.0017  Score=56.20  Aligned_cols=76  Identities=13%  Similarity=0.148  Sum_probs=44.9

Q ss_pred             ccccCCccccceeeecceee----cCCCcEEEEEEeccccchhHHHHHHH-hhCCCCCccc-ceeeeeeCCCCceEEEEe
Q 046594           65 LKSFGDSVEGLTLIKGDRAV----SRNLTVVAVKARRYMASQTKLEEEIL-LKSSSHLNIV-TLLGYPQDGLQRRCLVFE  138 (304)
Q Consensus        65 ~~~lg~g~~g~v~~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~e~~-l~~l~h~niv-~~~~~~~~~~~~~~lv~e  138 (304)
                      .+.|+.|..-.+|+......    ......+.+++............|.. ++.+.-.++. ++++++. +    .+|+|
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~-~----g~I~e  121 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFS-G----GRLEE  121 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEET-T----EEEEC
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHHhCCCCCeEEEEcC-C----ceEEE
Confidence            45788888888888764321    12345677777653322223444555 6655333444 6666653 2    68999


Q ss_pred             ecCCCCh
Q 046594          139 FMQRGSL  145 (304)
Q Consensus       139 ~~~~gsL  145 (304)
                      |++|.+|
T Consensus       122 fi~g~~l  128 (395)
T d1nw1a_         122 YIPSRPL  128 (395)
T ss_dssp             CCCEEEC
T ss_pred             EeccccC
Confidence            9987544

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0025  Score=53.55  Aligned_cols=30  Identities=20%  Similarity=0.241  Sum_probs=24.2

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ..+++|+|+.+.|||++.+  ..+.||+-+..
T Consensus       191 p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             CceeecCCCCcccEEEeCC--ceEEechhccc
Confidence            3578999999999999743  56899987754

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.79  E-value=0.0035  Score=52.23  Aligned_cols=32  Identities=19%  Similarity=0.148  Sum_probs=27.9

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeeEcccccccc
Q 046594          180 KPPIYHGNITSDNILLDELCNAKLAGFGAANY  211 (304)
Q Consensus       180 ~~~ivH~dlkp~Nill~~~~~~kl~Dfgla~~  211 (304)
                      ..|++|+|+.+.|++++.+...-+.||+.+..
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccccccCCcchhhhhcccccceeEeccccccc
Confidence            45899999999999999887778999998753