Citrus Sinensis ID: 046622

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--
Protein Sequence
MQGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDPPLSIRCALQH
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHccccHHHHHcccccccccccccEEEEEEEEcccccccccccccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccEEEEEEEEccccccccccccccEEEEccccc
Coil and Loop (DISEMBL)
MQGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHdlisrgtvqdpplsircalqh
Flexible Loop (DISEMBL)
MQGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLisrgtvqdpplSIRCALQH
Low Complexity Region (SEG)
MQGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDPPLSIRCALQH
Disordered region (IsUnstruct)
**********************RYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQ************
Disordered Region (DISOPRED)
**GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHD*************IRC****
Disordered Region (DISEMBL)
MQGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDPPLSIRCALQH
Disordered Region (DISPRO)
*Q**AKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISR**V*DPPL********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDPPLSIRCALQH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	72	2.2.26 [Sep-21-2011]
Q0V7V2	384	Probable protein phosphat	yes	no	0.972	0.182	0.767	3e-25
Q7Y138	386	Probable protein phosphat	yes	no	0.972	0.181	0.728	5e-23
Q5PNS9	400	Probable protein phosphat	no	no	0.930	0.167	0.691	3e-20
Q9FKX4	385	Probable protein phosphat	no	no	0.902	0.168	0.696	5e-20
Q9SD12	379	Probable protein phosphat	no	no	0.875	0.166	0.676	2e-19
Q5Z8P0	392	Probable protein phosphat	no	no	0.902	0.165	0.681	3e-19
Q9LHJ9	385	Probable protein phosphat	no	no	0.888	0.166	0.687	3e-19
Q10S32	399	Probable protein phosphat	no	no	0.902	0.162	0.651	2e-18
Q7XUC5	388	Probable protein phosphat	no	no	0.916	0.170	0.606	3e-18
Q7XCJ7	393	Probable protein phosphat	no	no	0.902	0.165	0.615	4e-18

>sp|Q0V7V2|P2C42_ARATH Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/73 (76%), Positives = 63/73 (86%), Gaps = 3/73 (4%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRG---TV 59
           G AKRL+KAAL EAARKREMRY+DL+KIDK VRRHFHDDITVIV+FLNHDLISRG   + 
Sbjct: 312 GSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVVFLNHDLISRGHINST 371

Query: 60  QDPPLSIRCALQH 72
           QD  +SIR AL+H
Sbjct: 372 QDTTVSIRSALEH 384

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp|Q7Y138|P2C36_ORYSJ Probable protein phosphatase 2C 36 OS=Oryza sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/70 (72%), Positives = 59/70 (84%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G A+RL+KAAL EAARKREMRY+DL KIDK VRRHFHDDITVIVLF+N+D +++G  Q  
Sbjct: 317 GSARRLIKAALHEAARKREMRYSDLMKIDKKVRRHFHDDITVIVLFINYDQLAKGHSQGQ 376

Query: 63  PLSIRCALQH 72
            LSIRCAL H
Sbjct: 377 SLSIRCALDH 386

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q5PNS9|P2C64_ARATH Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/68 (69%), Positives = 60/68 (88%), Gaps = 1/68 (1%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGT-VQD 61
           GIAKRLVK ALQEAA+KREMRY+DL+KID+ VRRHFHDDITVIV+F + +L+SRG+ ++ 
Sbjct: 309 GIAKRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFFDTNLVSRGSMLRG 368

Query: 62  PPLSIRCA 69
           P +S+R A
Sbjct: 369 PAVSVRGA 376

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9FKX4|P2C79_ARATH Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/66 (69%), Positives = 59/66 (89%), Gaps = 1/66 (1%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRG-TVQD 61
           GIA+RLVKAALQEAA+KREMRY+DL KI++ VRRHFHDDITV+VLFL+ +L+SR  +++ 
Sbjct: 310 GIARRLVKAALQEAAKKREMRYSDLNKIERGVRRHFHDDITVVVLFLDTNLLSRASSLKT 369

Query: 62  PPLSIR 67
           P +SIR
Sbjct: 370 PSVSIR 375

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 58/65 (89%), Gaps = 2/65 (3%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           GIA+RLVK ALQEAA+KREMRY+DL+KI++ VRRHFHDDITV+++FL+ + +S  +V+ P
Sbjct: 307 GIARRLVKMALQEAAKKREMRYSDLKKIERGVRRHFHDDITVVIIFLDTNQVS--SVKGP 364

Query: 63  PLSIR 67
           PLSIR
Sbjct: 365 PLSIR 369

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/66 (68%), Positives = 57/66 (86%), Gaps = 1/66 (1%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRG-TVQD 61
           G A+RL+KAALQEAA+KREMRY+DL+KID+ VRRHFHDDITVIV+FL+  L+SR  T + 
Sbjct: 309 GSARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVSRASTYRG 368

Query: 62  PPLSIR 67
           P +S+R
Sbjct: 369 PSVSLR 374

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9LHJ9|P2C38_ARATH Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 56/64 (87%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           GIA++L+K AL+EAA+KREMRY+DL+KID+ VRRHFHDDITVIV+FL+  L+SR T + P
Sbjct: 311 GIARKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSRRP 370

Query: 63  PLSI 66
            LSI
Sbjct: 371 LLSI 374

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGT-VQD 61
           GIA+RLVK A+QEAA+KREMRY+DL+KID+ VRRHFHDDITVIV+FL+ + IS+    + 
Sbjct: 310 GIARRLVKVAMQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNAISKANWSRG 369

Query: 62  PPLSIR 67
           P +S+R
Sbjct: 370 PSVSLR 375

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584300 PE=2 SV=2

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 56/66 (84%)

Query: 2   QGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQD 61
           +GIA+RLVKAAL+EAARKREM+Y D++K++K VRR FHDDITV+V+F++H+L+  G    
Sbjct: 305 EGIARRLVKAALKEAARKREMKYNDIKKLEKGVRRFFHDDITVVVVFIDHELLQDGDEST 364

Query: 62  PPLSIR 67
           P +S+R
Sbjct: 365 PEISVR 370

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 54/65 (83%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           GIA+RLVKAA+Q+AA+KREMRY+DL+KID+ VRRHFHDDITV+V+F + + I+      P
Sbjct: 311 GIARRLVKAAMQQAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFFDSNAITTANWSRP 370

Query: 63  PLSIR 67
            +S+R
Sbjct: 371 SVSLR 375

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	72
147821844	370	hypothetical protein VITISV_017615 [Viti	0.972	0.189	0.871	3e-28
225431984	370	PREDICTED: probable protein phosphatase	0.972	0.189	0.871	3e-28
357448891	373	Pyruvate dehydrogenase phosphatase [Medi	0.972	0.187	0.857	6e-28
255556416	471	protein phosphatase 2c, putative [Ricinu	0.972	0.148	0.857	1e-27
224108748	371	predicted protein [Populus trichocarpa]	0.972	0.188	0.857	1e-27
356519920	478	PREDICTED: probable protein phosphatase	0.972	0.146	0.842	5e-26
356564648	431	PREDICTED: probable protein phosphatase	0.972	0.162	0.842	9e-26
356558121	545	PREDICTED: probable protein phosphatase	0.972	0.128	0.814	6e-25
356532503	419	PREDICTED: probable protein phosphatase	0.972	0.167	0.828	1e-24
312281567	286	unnamed protein product [Thellungiella h	0.972	0.244	0.794	1e-24

>gi|147821844|emb|CAN72598.1| hypothetical protein VITISV_017615 [Vitis vinifera]

 Score =  129 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/70 (87%), Positives = 66/70 (94%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AKRLVKAALQEAARKREMRY+DL++IDK VRRHFHDDITVIVLFLNHDLISRG VQDP
Sbjct: 301 GSAKRLVKAALQEAARKREMRYSDLRRIDKKVRRHFHDDITVIVLFLNHDLISRGMVQDP 360

Query: 63  PLSIRCALQH 72
           PLS+R AL+H
Sbjct: 361 PLSVRSALEH 370

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431984|ref|XP_002273100.1| PREDICTED: probable protein phosphatase 2C 42 [Vitis vinifera] gi|296083233|emb|CBI22869.3| unnamed protein product [Vitis vinifera]

 Score =  129 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/70 (87%), Positives = 66/70 (94%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AKRLVKAALQEAARKREMRY+DL++IDK VRRHFHDDITVIVLFLNHDLISRG VQDP
Sbjct: 301 GSAKRLVKAALQEAARKREMRYSDLRRIDKKVRRHFHDDITVIVLFLNHDLISRGMVQDP 360

Query: 63  PLSIRCALQH 72
           PLS+R AL+H
Sbjct: 361 PLSVRSALEH 370

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448891|ref|XP_003594721.1| Pyruvate dehydrogenase phosphatase [Medicago truncatula] gi|355483769|gb|AES64972.1| Pyruvate dehydrogenase phosphatase [Medicago truncatula]

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/70 (85%), Positives = 65/70 (92%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AKRL+KAALQEAARKREMRY+DL+ IDK VRRHFHDDITVIVLFLNHDLI+RGTVQ+P
Sbjct: 304 GSAKRLIKAALQEAARKREMRYSDLRSIDKKVRRHFHDDITVIVLFLNHDLITRGTVQNP 363

Query: 63  PLSIRCALQH 72
           PLSIR AL H
Sbjct: 364 PLSIRSALNH 373

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556416|ref|XP_002519242.1| protein phosphatase 2c, putative [Ricinus communis] gi|223541557|gb|EEF43106.1| protein phosphatase 2c, putative [Ricinus communis]

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/70 (85%), Positives = 66/70 (94%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AKRLVKAALQEAARKREMRY+DL+KID+ VRRHFHDDITVIVLFLNHDLISRGT+Q P
Sbjct: 402 GSAKRLVKAALQEAARKREMRYSDLKKIDRKVRRHFHDDITVIVLFLNHDLISRGTLQIP 461

Query: 63  PLSIRCALQH 72
           P+SIR AL+H
Sbjct: 462 PVSIRSALEH 471

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108748|ref|XP_002314955.1| predicted protein [Populus trichocarpa] gi|222863995|gb|EEF01126.1| predicted protein [Populus trichocarpa]

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/70 (85%), Positives = 64/70 (91%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AKRLVKAALQEAARKRE RY+DLQKIDK VRRHFHDDITVIVLFLNHDLIS+G VQ P
Sbjct: 302 GSAKRLVKAALQEAARKRETRYSDLQKIDKKVRRHFHDDITVIVLFLNHDLISKGAVQTP 361

Query: 63  PLSIRCALQH 72
           P+SIR AL+H
Sbjct: 362 PVSIRSALEH 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519920|ref|XP_003528616.1| PREDICTED: probable protein phosphatase 2C 42-like [Glycine max]

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 59/70 (84%), Positives = 63/70 (90%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AKRL+KAAL EAARKREMRY+DL+KIDK VRRHFHDDI+VIVLFLNHDLISRGTV DP
Sbjct: 409 GSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISRGTVLDP 468

Query: 63  PLSIRCALQH 72
            LSIR AL H
Sbjct: 469 TLSIRSALDH 478

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564648|ref|XP_003550563.1| PREDICTED: probable protein phosphatase 2C 42-like [Glycine max]

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/70 (84%), Positives = 63/70 (90%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AKRL+KAAL EAARKREMRY+DL+KIDK VRRHFHDDI+VIVLFLNHDLISRGTV DP
Sbjct: 362 GSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISRGTVLDP 421

Query: 63  PLSIRCALQH 72
            LSIR AL H
Sbjct: 422 ALSIRSALDH 431

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558121|ref|XP_003547356.1| PREDICTED: probable protein phosphatase 2C 42-like [Glycine max]

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 57/70 (81%), Positives = 62/70 (88%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AK+LVKAALQEAARKREMRY+DL KIDK VRRHFHDDITVIVLFLNH+LISRG V + 
Sbjct: 476 GSAKKLVKAALQEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHNLISRGAVLNT 535

Query: 63  PLSIRCALQH 72
           PL+IR AL H
Sbjct: 536 PLTIRSALDH 545

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532503|ref|XP_003534811.1| PREDICTED: probable protein phosphatase 2C 42-like [Glycine max]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/70 (82%), Positives = 61/70 (87%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
           G AKRLVKAAL EAARKREMRY+DL KIDK VRRHFHDDITVIVLFLNHDLISRG V + 
Sbjct: 350 GSAKRLVKAALHEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHDLISRGAVLNT 409

Query: 63  PLSIRCALQH 72
           PL+IR AL H
Sbjct: 410 PLTIRSALDH 419

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281567|dbj|BAJ33649.1| unnamed protein product [Thellungiella halophila]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/73 (79%), Positives = 64/73 (87%), Gaps = 3/73 (4%)

Query: 3   GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRG---TV 59
           G AKRL+KAAL EAARKREMRY+DL+KIDK VRRHFHDDITVIV+FLNHDLISRG   + 
Sbjct: 214 GSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVVFLNHDLISRGHTNST 273

Query: 60  QDPPLSIRCALQH 72
           QD PLSIR AL+H
Sbjct: 274 QDSPLSIRSALEH 286

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	72
TAIR|locus:2086097	384	AT3G17090 [Arabidopsis thalian	0.972	0.182	0.767	6.8e-24
TAIR|locus:2121234	400	AT4G38520 [Arabidopsis thalian	0.930	0.167	0.691	2.9e-19
TAIR|locus:2156877	385	AT5G66080 [Arabidopsis thalian	0.902	0.168	0.696	8.9e-19
TAIR|locus:2091265	385	AT3G12620 [Arabidopsis thalian	0.888	0.166	0.687	2.5e-18
TAIR|locus:2081770	379	AT3G51370 [Arabidopsis thalian	0.875	0.166	0.676	3e-18
TAIR|locus:2151256	370	AT5G02760 [Arabidopsis thalian	0.902	0.175	0.636	3e-15
TAIR|locus:2097238	384	AT3G55050 [Arabidopsis thalian	0.666	0.125	0.75	3.4e-15
TAIR|locus:2118899	380	AT4G33920 [Arabidopsis thalian	0.847	0.160	0.565	2.6e-14
TAIR|locus:2170234	393	AT5G06750 [Arabidopsis thalian	0.875	0.160	0.537	7.6e-13

TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 56/73 (76%), Positives = 63/73 (86%)

Query:     3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTV--- 59
             G AKRL+KAAL EAARKREMRY+DL+KIDK VRRHFHDDITVIV+FLNHDLISRG +   
Sbjct:   312 GSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVVFLNHDLISRGHINST 371

Query:    60 QDPPLSIRCALQH 72
             QD  +SIR AL+H
Sbjct:   372 QDTTVSIRSALEH 384

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA

TAIR|locus:2121234 AT4G38520 [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 2.9e-19, P = 2.9e-19
 Identities = 47/68 (69%), Positives = 60/68 (88%)

Query:     3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTV-QD 61
             GIAKRLVK ALQEAA+KREMRY+DL+KID+ VRRHFHDDITVIV+F + +L+SRG++ + 
Sbjct:   309 GIAKRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFFDTNLVSRGSMLRG 368

Query:    62 PPLSIRCA 69
             P +S+R A
Sbjct:   369 PAVSVRGA 376

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA

TAIR|locus:2156877 AT5G66080 [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 8.9e-19, P = 8.9e-19
 Identities = 46/66 (69%), Positives = 59/66 (89%)

Query:     3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGT-VQD 61
             GIA+RLVKAALQEAA+KREMRY+DL KI++ VRRHFHDDITV+VLFL+ +L+SR + ++ 
Sbjct:   310 GIARRLVKAALQEAAKKREMRYSDLNKIERGVRRHFHDDITVVVLFLDTNLLSRASSLKT 369

Query:    62 PPLSIR 67
             P +SIR
Sbjct:   370 PSVSIR 375

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2091265 AT3G12620 [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 2.5e-18, P = 2.5e-18
 Identities = 44/64 (68%), Positives = 56/64 (87%)

Query:     3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
             GIA++L+K AL+EAA+KREMRY+DL+KID+ VRRHFHDDITVIV+FL+  L+SR T + P
Sbjct:   311 GIARKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSRRP 370

Query:    63 PLSI 66
              LSI
Sbjct:   371 LLSI 374

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA

TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 3.0e-18, P = 3.0e-18
 Identities = 44/65 (67%), Positives = 58/65 (89%)

Query:     3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQDP 62
             GIA+RLVK ALQEAA+KREMRY+DL+KI++ VRRHFHDDITV+++FL+ + +S  +V+ P
Sbjct:   307 GIARRLVKMALQEAAKKREMRYSDLKKIERGVRRHFHDDITVVIIFLDTNQVS--SVKGP 364

Query:    63 PLSIR 67
             PLSIR
Sbjct:   365 PLSIR 369

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 3.0e-15, P = 3.0e-15
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query:     2 QGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTVQD 61
             QGIA+RL+KAAL+EAA+KREMRY+DL +I   VRRHFHDDITVIV++LN   +   +   
Sbjct:   297 QGIARRLLKAALKEAAKKREMRYSDLTEIHPGVRRHFHDDITVIVVYLNPHPVKTNSWAS 356

Query:    62 PPLSIR 67
             P LSIR
Sbjct:   357 P-LSIR 361

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA

TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 3.4e-15, P = 3.4e-15
 Identities = 36/48 (75%), Positives = 47/48 (97%)

Query:     3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLN 50
             G+A++LVKAALQEAA+KREMRY+DL+KI++ +RRHFHDDITVIV+FL+
Sbjct:   312 GVARKLVKAALQEAAKKREMRYSDLEKIERGIRRHFHDDITVIVVFLH 359

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA

TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 2.6e-14, P = 2.6e-14
 Identities = 39/69 (56%), Positives = 52/69 (75%)

Query:     3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFL--------NHDLI 54
             GIA+RLV+AAL+EAA+KREMRY D++KI K +RRHFHDDI+VIV++L        N  L+
Sbjct:   292 GIARRLVRAALEEAAKKREMRYGDIKKIAKGIRRHFHDDISVIVVYLDQNKTSSSNSKLV 351

Query:    55 SRGTVQDPP 63
              +G +  PP
Sbjct:   352 KQGGITAPP 360

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

TAIR|locus:2170234 AT5G06750 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 7.6e-13, P = 7.6e-13
 Identities = 36/67 (53%), Positives = 53/67 (79%)

Query:     3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDL--ISRGTVQ 60
             GIA+RLV+ A+  AA+KREM Y DL+K+++ VRR FHDDITV+V+F++++L  + + TV 
Sbjct:   313 GIARRLVRRAITIAAKKREMNYDDLKKVERGVRRFFHDDITVVVIFIDNELLMVEKATV- 371

Query:    61 DPPLSIR 67
              P LSI+
Sbjct:   372 -PELSIK 377


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.139   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       72        72   0.00091  102 3  11 22  0.38    28
                                                     29  0.43    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  440 (47 KB)
  Total size of DFA:  78 KB (2064 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.29u 0.09s 8.38t   Elapsed:  00:00:01
  Total cpu time:  8.29u 0.09s 8.38t   Elapsed:  00:00:01
  Start:  Thu May  9 15:20:45 2013   End:  Thu May  9 15:20:46 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0V7V2	P2C42_ARATH	3, ., 1, ., 3, ., 1, 6	0.7671	0.9722	0.1822	yes	no
Q7Y138	P2C36_ORYSJ	3, ., 1, ., 3, ., 1, 6	0.7285	0.9722	0.1813	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00033203001 SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (164 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	72
KOG0700	390	consensus Protein phosphatase 2C/pyruvate dehydrog	97.96
PLN03145	365	Protein phosphatase 2c; Provisional	91.54
cd00143	254	PP2Cc Serine/threonine phosphatases, family 2C, ca	90.1
PF07228	193	SpoIIE: Stage II sporulation protein E (SpoIIE); I	88.01
PF14542	78	Acetyltransf_CG: GCN5-related N-acetyl-transferase	86.09
smart00332	255	PP2Cc Serine/threonine phosphatases, family 2C, ca	81.64
COG2388	99	Predicted acetyltransferase [General function pred	80.67

>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]

Probab=97.96  E-value=4.8e-06  Score=66.20  Aligned_cols=27  Identities=44%  Similarity=0.575  Sum_probs=25.5

Q ss_pred             ccHHHHHHHHHHHHHHHhcCCChHHHh
Q 046622            2 QGIAKRLVKAALQEAARKREMRYADLQ   28 (72)
Q Consensus         2 ~GiAkrLV~aaL~~AAkk~~m~y~dL~   28 (72)
                      .|+|++||++||.+||+|+||+|+||+
T Consensus       364 ~~~A~hLIr~aL~~aakk~~~r~s~ll  390 (390)
T KOG0700|consen  364 GNPATHLIRHALGRAAKKRGMRLSDLL  390 (390)
T ss_pred             CCHHHHHHHHHHhhhhhhccccHhhcC
Confidence            489999999999999999999999985

>PLN03145 Protein phosphatase 2c; Provisional

Probab=91.54  E-value=0.31  Score=37.80  Aligned_cols=13  Identities=23%  Similarity=0.572  Sum_probs=12.1

Q ss_pred             ccceEEEEEEecC
Q 046622           39 HDDITVIVLFLNH   51 (72)
Q Consensus        39 HDDITVIVvfLd~   51 (72)
                      -|+||||||+|+.
T Consensus       319 ~DNITvIVV~l~~  331 (365)
T PLN03145        319 GDNLAVVVVCFQS  331 (365)
T ss_pred             CCCEEEEEEEeec
Confidence            5999999999997

>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity

Probab=90.10  E-value=0.34  Score=32.40  Aligned_cols=12  Identities=58%  Similarity=0.808  Sum_probs=10.6

Q ss_pred             cccceEEEEEEe
Q 046622           38 FHDDITVIVLFL   49 (72)
Q Consensus        38 fHDDITVIVvfL   49 (72)
                      -+||+|+||+++
T Consensus       243 ~~Dn~t~i~~~~  254 (254)
T cd00143         243 SHDNITVVVVRL  254 (254)
T ss_pred             CCCCEEEEEEeC
Confidence            689999999975

>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg

Probab=88.01  E-value=1.3  Score=28.92  Aligned_cols=13  Identities=46%  Similarity=0.626  Sum_probs=10.2

Q ss_pred             ccccceEEEEEEe
Q 046622           37 HFHDDITVIVLFL   49 (72)
Q Consensus        37 ~fHDDITVIVvfL   49 (72)
                      ..+||+||||+-.
T Consensus       180 ~~~DD~tvl~~~~  192 (193)
T PF07228_consen  180 PLRDDITVLVIRR  192 (193)
T ss_dssp             STSS-EEEEEEEE
T ss_pred             CCCCceEEEEEEE
Confidence            6899999999864

pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....

>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A

Probab=86.09  E-value=0.83  Score=28.01  Aligned_cols=18  Identities=61%  Similarity=0.745  Sum_probs=15.6

Q ss_pred             ccHHHHHHHHHHHHHHHh
Q 046622            2 QGIAKRLVKAALQEAARK   19 (72)
Q Consensus         2 ~GiAkrLV~aaL~~AAkk   19 (72)
                      .|+|+.|+++||+.|.++
T Consensus        37 qGia~~L~~~~l~~a~~~   54 (78)
T PF14542_consen   37 QGIAKKLVEAALDYAREN   54 (78)
T ss_dssp             TTHHHHHHHHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHHHHHC
Confidence            499999999999988663

>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain

Probab=81.64  E-value=1.6  Score=29.44  Aligned_cols=11  Identities=55%  Similarity=0.679  Sum_probs=9.5

Q ss_pred             ccccceEEEEE
Q 046622           37 HFHDDITVIVL   47 (72)
Q Consensus        37 ~fHDDITVIVv   47 (72)
                      ..+||+|||||
T Consensus       245 ~~~Dn~T~ivv  255 (255)
T smart00332      245 GSKDNITVIVV  255 (255)
T ss_pred             CCCCCeEEEEC
Confidence            57899999986

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.

>COG2388 Predicted acetyltransferase [General function prediction only]

Probab=80.67  E-value=1.5  Score=29.02  Aligned_cols=20  Identities=55%  Similarity=0.825  Sum_probs=15.9

Q ss_pred             ccHHHHHHHHHHHHHHHhcCC
Q 046622            2 QGIAKRLVKAALQEAARKREM   22 (72)
Q Consensus         2 ~GiAkrLV~aaL~~AAkk~~m   22 (72)
                      .|+|++|++.||++| |+.+.
T Consensus        54 qGia~~L~~~al~~a-r~~g~   73 (99)
T COG2388          54 QGIAQKLVEKALEEA-REAGL   73 (99)
T ss_pred             CcHHHHHHHHHHHHH-HHcCC
Confidence            499999999999876 44553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	72
2pnq_A	467	[pyruvate dehydrogenase [lipoamide]]-phosphatase 1	1e-14
2j4o_A	401	Mitogen-activated protein kinase kinase kinase 7-i	8e-10
2irm_A	358	Mitogen-activated protein kinase kinase kinase 7 i	9e-06

>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467

 Score = 65.6 bits (159), Expect = 1e-14
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 2   QGIAKRLVKAAL--QEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNHDLISRGTV 59
           Q  A  L++ A+   E       R + +  + + + R + DDIT+IV+  N  ++     
Sbjct: 405 QNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVVGAYQN 464

Query: 60  QD 61
           Q+
Sbjct: 465 QE 466

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401

 Score = 51.9 bits (124), Expect = 8e-10
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 3/69 (4%)

Query: 2   QGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHF---HDDITVIVLFLNHDLISRGT 58
              AK+    A+ +A   R  R           R  F   H+D+T++V    + L     
Sbjct: 315 TEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPLGEMSQ 374

Query: 59  VQDPPLSIR 67
               P    
Sbjct: 375 PTPSPAPAA 383

>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358

 Score = 40.4 bits (94), Expect = 9e-06
 Identities = 8/50 (16%), Positives = 21/50 (42%)

Query: 2   QGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDITVIVLFLNH 51
           Q     + ++ +    +     Y  L +  + V  +  DD+T+++   N+
Sbjct: 308 QSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY 357

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	72
2pnq_A	467	[pyruvate dehydrogenase [lipoamide]]-phosphatase 1	99.23
2irm_A	358	Mitogen-activated protein kinase kinase kinase 7 i	96.67
2j4o_A	401	Mitogen-activated protein kinase kinase kinase 7-i	96.27
1txo_A	237	Putative bacterial enzyme; serine/threonine protei	95.82
2pk0_A	250	Serine/threonine protein phosphatase STP1; SI moti	94.92
2i44_A	324	Serine-threonine phosphatase 2C; PSI-2, 8817Z, str	94.66
2jfr_A	234	Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata	94.57
3kdj_B	316	Protein phosphatase 2C 56; ABA, PYL1, abscisic aci	94.27
2iq1_A	274	Protein phosphatase 2C kappa, PPM1K; structural ge	93.71
2j82_A	240	TPPHA, protein serine-threonine phosphatase; PP2C	93.19
3t91_A	242	Stage II sporulation protein E; SPOIIE, phosphatas	92.99
3qn1_B	337	Protein phosphatase 2C 16; start domain, BET V dom	92.13
2p8e_A	307	PPM1B beta isoform variant 6; structural genomics,	91.94
4da1_A	389	Protein phosphatase 1K, mitochondrial; metal-ION-a	91.74
3d8k_A	377	PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR	91.47
2isn_A	364	NYSGXRC-8828Z, phosphatase; pathogenic strain, pra	90.85
2i0o_A	304	Ser/Thr phosphatase; beta sandwich, structural gen	90.72
3rnr_A	211	Stage II sporulation E family protein; structural	89.99
1a6q_A	382	Phosphatase 2C; catalytic mechanism, metalloenzyme	89.5
3pu9_A	242	Protein serine/threonine phosphatase; PSI-biology,	88.11

>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A

Probab=99.23  E-value=1.9e-12  Score=99.16  Aligned_cols=52  Identities=21%  Similarity=0.386  Sum_probs=26.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCChH---HHhcccCcCcCccccceEEEEEEecCccccc
Q 046622            4 IAKRLVKAALQEAARKREMRYA---DLQKIDKMVRRHFHDDITVIVLFLNHDLISR   56 (72)
Q Consensus         4 iAkrLV~aaL~~AAkk~~m~y~---dL~~I~~G~RR~fHDDITVIVvfLd~~~~~~   56 (72)
                      .|.+||++||... ++.+|+|+   +|++||+|.||+|||||||||||++.+.+.+
T Consensus       407 aA~~Lir~Al~~~-~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~~~~~~  461 (467)
T 2pnq_A          407 AATHLIRHAVGNN-EFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVVGA  461 (467)
T ss_dssp             HHHHHHHHHHC--------------------------CCSCEEEEEEEECHHHHHH
T ss_pred             HHHHHHHHHhcCC-CcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCchHhhh
Confidence            4889999999875 33448776   6999999999999999999999999887764

>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}

Probab=96.67  E-value=0.0035  Score=45.35  Aligned_cols=43  Identities=23%  Similarity=0.373  Sum_probs=30.2

Q ss_pred             cHHHHHHHHHHHHHHHhcCCChHHHhcccCcCcCc--cccceEEEEEEecC
Q 046622            3 GIAKRLVKAALQEAARKREMRYADLQKIDKMVRRH--FHDDITVIVLFLNH   51 (72)
Q Consensus         3 GiAkrLV~aaL~~AAkk~~m~y~dL~~I~~G~RR~--fHDDITVIVvfLd~   51 (72)
                      .+|+.|++.|+..+...    |.+..  +.+.+|-  .+||||||||+|++
T Consensus       313 ~~a~~Lv~~A~~~~~~~----~~~~~--~~~~~~Gg~~~DNiTvivv~~~~  357 (358)
T 2irm_A          313 GVAQSVVHRIVQAHHDT----YMQLV--EEHRSVTFNSRDDVTLLIRNFNY  357 (358)
T ss_dssp             HHHHHHHHHHHHHHHHH----HHHHH--SSSCCCCCCEECCEEEEEEESCC
T ss_pred             HHHHHHHHHHHHhhhhh----hcccc--ccccccCCCCCCCeEEEEEeCCC
Confidence            36888888888866543    22221  3445566  89999999999874

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A

Probab=96.27  E-value=0.007  Score=44.85  Aligned_cols=40  Identities=18%  Similarity=0.183  Sum_probs=26.4

Q ss_pred             cHHHHHHHHHHHHHHHhcCCChHHHhcccCcC-c---CccccceEEEEEEecCc
Q 046622            3 GIAKRLVKAALQEAARKREMRYADLQKIDKMV-R---RHFHDDITVIVLFLNHD   52 (72)
Q Consensus         3 GiAkrLV~aaL~~AAkk~~m~y~dL~~I~~G~-R---R~fHDDITVIVvfLd~~   52 (72)
                      .+|+.||+.|++.+...          ..+|. +   +..+||||||||+|+..
T Consensus       325 ~~a~~Lv~~A~~~~~~a----------~~~G~~~~~~~~~~DNiTvivv~~~~~  368 (401)
T 2j4o_A          325 AVAQAVVDRVKRIHSDT----------FASGGERARFCPRHEDMTLLVRNFGYP  368 (401)
T ss_dssp             HHHHHHHHHHHHHHHHH----------HHSCSSGGGGCSEECCEEEEEEEEBCC
T ss_pred             HHHHHHHHHHHHhhhhh----------hhcCCcccccCCCCCCeEEEEEEcCCC
Confidence            36788888887755321          11232 2   23589999999999874

>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A

Probab=95.82  E-value=0.01  Score=39.25  Aligned_cols=14  Identities=43%  Similarity=0.508  Sum_probs=11.9

Q ss_pred             cccceEEEEEEecC
Q 046622           38 FHDDITVIVLFLNH   51 (72)
Q Consensus        38 fHDDITVIVvfLd~   51 (72)
                      -+||||||||.+++
T Consensus       224 ~~DniTvivv~~~~  237 (237)
T 1txo_A          224 GPDNVTVVVADLEH  237 (237)
T ss_dssp             CCSCEEEEEEEEEC
T ss_pred             CCCCeEEEEEEeeC
Confidence            36999999999864

>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}

Probab=94.92  E-value=0.032  Score=37.11  Aligned_cols=15  Identities=27%  Similarity=0.507  Sum_probs=12.4

Q ss_pred             cccceEEEEEEecCc
Q 046622           38 FHDDITVIVLFLNHD   52 (72)
Q Consensus        38 fHDDITVIVvfLd~~   52 (72)
                      -+||||||||+++.+
T Consensus       234 ~~DniTvivv~~~~~  248 (250)
T 2pk0_A          234 GLDNITVALVYVESE  248 (250)
T ss_dssp             CCSCEEEEEEEECC-
T ss_pred             CCCCeEEEEEEeeCC
Confidence            479999999999753

>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}

Probab=94.66  E-value=0.029  Score=39.28  Aligned_cols=16  Identities=25%  Similarity=0.544  Sum_probs=13.0

Q ss_pred             CccccceEEEEEEecC
Q 046622           36 RHFHDDITVIVLFLNH   51 (72)
Q Consensus        36 R~fHDDITVIVvfLd~   51 (72)
                      |--+||||||||+++.
T Consensus       307 ~g~~DNiTvivv~~~~  322 (324)
T 2i44_A          307 NQSADNITAMTVFFKK  322 (324)
T ss_dssp             TCCCCCEEEEEEEEC-
T ss_pred             cCCCCCCEEEEEEeeC
Confidence            3468999999999975

>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A

Probab=94.57  E-value=0.043  Score=36.13  Aligned_cols=12  Identities=42%  Similarity=0.434  Sum_probs=10.7

Q ss_pred             cccceEEEEEEe
Q 046622           38 FHDDITVIVLFL   49 (72)
Q Consensus        38 fHDDITVIVvfL   49 (72)
                      -+||||||||.+
T Consensus       222 ~~DniTvivv~~  233 (234)
T 2jfr_A          222 GSDNTTVVVIDL  233 (234)
T ss_dssp             CCSCEEEEEEEE
T ss_pred             CCCCeEEEEEEe
Confidence            479999999987

>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*

Probab=94.27  E-value=0.051  Score=38.30  Aligned_cols=15  Identities=33%  Similarity=0.463  Sum_probs=13.0

Q ss_pred             cccceEEEEEEecCc
Q 046622           38 FHDDITVIVLFLNHD   52 (72)
Q Consensus        38 fHDDITVIVvfLd~~   52 (72)
                      -+|+||||||.+...
T Consensus       293 ~~DNiTvivv~l~~~  307 (316)
T 3kdj_B          293 SKDNISVVVVDLKPR  307 (316)
T ss_dssp             CCSCEEEEEEECSCC
T ss_pred             CCCCeEEEEEEccCC
Confidence            389999999999864

>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}

Probab=93.71  E-value=0.076  Score=36.49  Aligned_cols=14  Identities=21%  Similarity=0.287  Sum_probs=12.4

Q ss_pred             cccceEEEEEEecC
Q 046622           38 FHDDITVIVLFLNH   51 (72)
Q Consensus        38 fHDDITVIVvfLd~   51 (72)
                      -+||||||||++..
T Consensus       250 ~~DNiTvivv~~~~  263 (274)
T 2iq1_A          250 TEDNSTAVVVPFGA  263 (274)
T ss_dssp             CCSCEEEEEEECTT
T ss_pred             CCCCeEEEEEEccC
Confidence            37999999999975

>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A

Probab=93.19  E-value=0.1  Score=34.32  Aligned_cols=11  Identities=36%  Similarity=0.751  Sum_probs=9.6

Q ss_pred             ccceEEEEEEe
Q 046622           39 HDDITVIVLFL   49 (72)
Q Consensus        39 HDDITVIVvfL   49 (72)
                      +||||||||.+
T Consensus       230 ~DniTvivv~~  240 (240)
T 2j82_A          230 RDNVTVVVISV  240 (240)
T ss_dssp             CSCEEEEEEEC
T ss_pred             CCCeEEEEEeC
Confidence            69999999964

>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*

Probab=92.99  E-value=0.17  Score=33.55  Aligned_cols=15  Identities=40%  Similarity=0.833  Sum_probs=13.3

Q ss_pred             cccceEEEEEEecCc
Q 046622           38 FHDDITVIVLFLNHD   52 (72)
Q Consensus        38 fHDDITVIVvfLd~~   52 (72)
                      .+|||||||+.+...
T Consensus       208 ~~DDiTvv~i~~~~~  222 (242)
T 3t91_A          208 IEDDMTVVVVRIDHN  222 (242)
T ss_dssp             CCSCEEEEEEEEEEC
T ss_pred             CCCceEEEEEEEecC
Confidence            789999999999864

>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*

Probab=92.13  E-value=0.14  Score=36.58  Aligned_cols=14  Identities=36%  Similarity=0.636  Sum_probs=12.6

Q ss_pred             ccceEEEEEEecCc
Q 046622           39 HDDITVIVLFLNHD   52 (72)
Q Consensus        39 HDDITVIVvfLd~~   52 (72)
                      +|+||||||.++..
T Consensus       317 ~DNiTvivv~l~~~  330 (337)
T 3qn1_B          317 KDNISIIVIDLKAQ  330 (337)
T ss_dssp             CSCEEEEEEECCSC
T ss_pred             CCCEEEEEEEecCC
Confidence            79999999999864

>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}

Probab=91.94  E-value=0.17  Score=35.47  Aligned_cols=15  Identities=7%  Similarity=0.545  Sum_probs=11.0

Q ss_pred             cccceEEEEEEecCc
Q 046622           38 FHDDITVIVLFLNHD   52 (72)
Q Consensus        38 fHDDITVIVvfLd~~   52 (72)
                      -.|+||||||.+...
T Consensus       286 ~~DNiTvivv~~~~~  300 (307)
T 2p8e_A          286 SRDNMSIVLVCFSNE  300 (307)
T ss_dssp             CCSCEEEEEEEC---
T ss_pred             CCCCeEEEEEECCCC
Confidence            479999999998764

>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A

Probab=91.74  E-value=0.13  Score=37.64  Aligned_cols=13  Identities=23%  Similarity=0.365  Sum_probs=11.9

Q ss_pred             ccceEEEEEEecC
Q 046622           39 HDDITVIVLFLNH   51 (72)
Q Consensus        39 HDDITVIVvfLd~   51 (72)
                      +|+||||||.++.
T Consensus       365 ~DNiTvivv~~~~  377 (389)
T 4da1_A          365 EDNSTAVVVPFGA  377 (389)
T ss_dssp             CSCEEEEEEEECC
T ss_pred             CCCeEEEEEEecC
Confidence            5999999999986

>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}

Probab=91.47  E-value=0.087  Score=38.91  Aligned_cols=17  Identities=24%  Similarity=0.382  Sum_probs=14.3

Q ss_pred             CccccceEEEEEEecCc
Q 046622           36 RHFHDDITVIVLFLNHD   52 (72)
Q Consensus        36 R~fHDDITVIVvfLd~~   52 (72)
                      |--+|+||||||+++..
T Consensus       310 ~g~~DNiTvivv~~~~~  326 (377)
T 3d8k_A          310 RKVTKNISTFVRHLPES  326 (377)
T ss_dssp             SSCCSCCCEEEEECCSS
T ss_pred             cCCCCCEEEEEEEecCC
Confidence            45689999999999863

>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}

Probab=90.85  E-value=0.28  Score=35.90  Aligned_cols=15  Identities=20%  Similarity=0.518  Sum_probs=13.0

Q ss_pred             cccceEEEEEEecCc
Q 046622           38 FHDDITVIVLFLNHD   52 (72)
Q Consensus        38 fHDDITVIVvfLd~~   52 (72)
                      -+|+||||||.++..
T Consensus       321 ~~DNiTvivv~~~~~  335 (364)
T 2isn_A          321 SQDNISVMLVAFHNQ  335 (364)
T ss_dssp             CCSCEEEEEEEECSS
T ss_pred             CCCCEEEEEEEcCCC
Confidence            489999999999864

>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}

Probab=90.72  E-value=0.16  Score=35.48  Aligned_cols=14  Identities=21%  Similarity=0.342  Sum_probs=9.1

Q ss_pred             ccccceEEEEEEec
Q 046622           37 HFHDDITVIVLFLN   50 (72)
Q Consensus        37 ~fHDDITVIVvfLd   50 (72)
                      .-.|+||||||.++
T Consensus       291 g~~DNiTvivv~~~  304 (304)
T 2i0o_A          291 TGCDNMTAIIVQFK  304 (304)
T ss_dssp             ----CEEEEEEEEC
T ss_pred             CCCCCeEEEEEEeC
Confidence            35799999999874

>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}

Probab=89.99  E-value=0.33  Score=32.09  Aligned_cols=12  Identities=25%  Similarity=0.681  Sum_probs=10.4

Q ss_pred             cccceEEEEEEe
Q 046622           38 FHDDITVIVLFL   49 (72)
Q Consensus        38 fHDDITVIVvfL   49 (72)
                      -+||||||||+|
T Consensus       200 ~~DNiTvivv~L  211 (211)
T 3rnr_A          200 YQDNATLALVIL  211 (211)
T ss_dssp             SCSSCEEEEEEC
T ss_pred             CCCceEEEEEeC
Confidence            359999999986

>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A

Probab=89.50  E-value=0.39  Score=35.41  Aligned_cols=14  Identities=21%  Similarity=0.529  Sum_probs=12.3

Q ss_pred             cccceEEEEEEecC
Q 046622           38 FHDDITVIVLFLNH   51 (72)
Q Consensus        38 fHDDITVIVvfLd~   51 (72)
                      -+|+||||||+++.
T Consensus       280 ~~DNiTvivv~~~~  293 (382)
T 1a6q_A          280 SRDNMSVILICFPN  293 (382)
T ss_dssp             CCSCEEEEEEECTT
T ss_pred             CcCCEEEEEEEecC
Confidence            37999999999975

>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}

Probab=88.11  E-value=0.4  Score=32.44  Aligned_cols=14  Identities=50%  Similarity=0.641  Sum_probs=12.4

Q ss_pred             cccceEEEEEEecC
Q 046622           38 FHDDITVIVLFLNH   51 (72)
Q Consensus        38 fHDDITVIVvfLd~   51 (72)
                      .+|||||+|+.+..
T Consensus       212 ~~DDiTvlvv~~~~  225 (242)
T 3pu9_A          212 AGDDMTVVVLRLRN  225 (242)
T ss_dssp             CSSCEEEEEEEEEE
T ss_pred             CCCCeEEEEEEEec
Confidence            58999999999865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	72
d1txoa_	235	putative serine/threonine phosphatase pstp/ppp {My	95.32
d1a6qa2	295	Protein serine/threonine phosphatase 2C, catalytic	94.97
d1cjwa_	166	Serotonin N-acetyltranferase {Sheep (Ovis aries) [	84.88
d1xmta_	95	Hypothetical protein AT1g77540 {Thale cress (Arabi	82.87
d1r57a_	102	Hypothetical protein SA2309 {Staphylococcus aureus	81.08

>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: putative serine/threonine phosphatase pstp/ppp
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.32  E-value=0.0092  Score=38.17  Aligned_cols=13  Identities=46%  Similarity=0.680  Sum_probs=11.7

Q ss_pred             ccceEEEEEEecC
Q 046622           39 HDDITVIVLFLNH   51 (72)
Q Consensus        39 HDDITVIVvfLd~   51 (72)
                      +||||||||.|++
T Consensus       223 ~DNiTvivv~l~~  235 (235)
T d1txoa_         223 PDNVTVVVADLEH  235 (235)
T ss_dssp             CSCEEEEEEEEEC
T ss_pred             CCCEEEEEEEEeC
Confidence            6999999999874

>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.97  E-value=0.01  Score=39.94  Aligned_cols=14  Identities=21%  Similarity=0.529  Sum_probs=12.4

Q ss_pred             cccceEEEEEEecC
Q 046622           38 FHDDITVIVLFLNH   51 (72)
Q Consensus        38 fHDDITVIVvfLd~   51 (72)
                      -+|+||||||+|+.
T Consensus       279 s~DNiTvivv~~~~  292 (295)
T d1a6qa2         279 SRDNMSVILICFPN  292 (295)
T ss_dssp             CCSCEEEEEEECTT
T ss_pred             CCCCeEEEEEeccC
Confidence            36999999999985

>d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Serotonin N-acetyltranferase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=84.88  E-value=0.31  Score=28.19  Aligned_cols=20  Identities=20%  Similarity=0.194  Sum_probs=17.4

Q ss_pred             ccHHHHHHHHHHHHHHHhcC
Q 046622            2 QGIAKRLVKAALQEAARKRE   21 (72)
Q Consensus         2 ~GiAkrLV~aaL~~AAkk~~   21 (72)
                      .||++.|+++++++++++.+
T Consensus       104 ~GiG~~Ll~~~~~~~~~~~~  123 (166)
T d1cjwa_         104 QGKGSVLLWRYLHHVGAQPA  123 (166)
T ss_dssp             SSHHHHHHHHHHHHHHTSTT
T ss_pred             CCHHHHHHHHHHHHHHHhCC
Confidence            59999999999999987555

>d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein AT1g77540
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.87  E-value=0.4  Score=28.36  Aligned_cols=19  Identities=32%  Similarity=0.461  Sum_probs=15.6

Q ss_pred             ccHHHHHHHHHHHHHHHhcC
Q 046622            2 QGIAKRLVKAALQEAARKRE   21 (72)
Q Consensus         2 ~GiAkrLV~aaL~~AAkk~~   21 (72)
                      .|||+.||++||..|-. .|
T Consensus        47 qGia~~Lv~~al~~ar~-~g   65 (95)
T d1xmta_          47 LGLASHLCVAAFEHASS-HS   65 (95)
T ss_dssp             SCHHHHHHHHHHHHHHH-TT
T ss_pred             ChHHHHHHHHHHHHHHH-CC
Confidence            59999999999987655 44

>d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein SA2309
species: Staphylococcus aureus [TaxId: 1280]

Probab=81.08  E-value=0.49  Score=27.63  Aligned_cols=21  Identities=38%  Similarity=0.781  Sum_probs=16.7

Q ss_pred             ccHHHHHHHHHHHHHHHhcCCC
Q 046622            2 QGIAKRLVKAALQEAARKREMR   23 (72)
Q Consensus         2 ~GiAkrLV~aaL~~AAkk~~m~   23 (72)
                      .|||++|++++++.| +++|++
T Consensus        50 ~Gig~~Lv~~~l~~A-r~~g~k   70 (102)
T d1r57a_          50 QGVGKKLLKAVVEHA-RENNLK   70 (102)
T ss_dssp             TCTHHHHHHHHHHHH-HHHTCE
T ss_pred             ccHHHHHHHHHHHHH-HHCCCE
Confidence            599999999999865 557753