Citrus Sinensis ID: 046708

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
MERKISSATQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYASGSCGILPETGRPFRLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPFNLKELVKM
cccccccccccccEEEEccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHccccccccccHHHHHcc
cccccccccccccEEEEEccccccccccccHHHHccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccEEEcEEHcccccccccccHHHHHHcccccEEEEEcccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcHHHcccEcccccccccccccEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHccccccccccHHHHHcc
merkissatqlAPALYVFgdslfdsgnnnllptiaranylpyganfvnksstgrftngktvpDFVAEflglpysppflkirdklpltglnyasgscgilpetgrpfrlynlgarkivmfeigpigcipsitrknkhtgrcvedkNQLVSYFNNMLPTMLQNLTsclegstfvnghahwlgydavinppkyglvdssnpcciawfngtsgcipflkpcsnanqhyfWDAYHLTEAMYSLFAShcindksfcepfnLKELVKM
merkissatqlaPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYASGscgilpetgrPFRLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPFNLKELVKM
MERKISSATQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYASGSCGILPETGRPFRLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPFNLKELVKM
**********LAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYASGSCGILPETGRPFRLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPFNLK*****
*************ALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYASGSCGILPETGRPFRLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPFNLKELVKM
********TQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYASGSCGILPETGRPFRLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPFNLKELVKM
****ISSATQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYASGSCGILPETGRPFRLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPFNLKELVKM
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MERKISSATQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYASGSCGILPETGRPFRLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPFNLKELVKM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query261 2.2.26 [Sep-21-2011]
Q8LFJ9364 GDSL esterase/lipase 7 OS yes no 0.586 0.420 0.403 5e-25
Q9FNP2385 GDSL esterase/lipase At5g no no 0.436 0.296 0.508 2e-24
Q9SF78384 GDSL esterase/lipase At1g no no 0.590 0.401 0.382 2e-23
Q9SIF5367 GDSL esterase/lipase At2g no no 0.352 0.250 0.526 2e-22
Q9SIF3322 GDSL esterase/lipase At2g no no 0.885 0.717 0.285 3e-22
O64469349 GDSL esterase/lipase At2g no no 0.379 0.283 0.5 8e-22
O23470368 GDSL esterase/lipase At4g no no 0.593 0.421 0.358 6e-21
Q8L5Z1370 GDSL esterase/lipase At1g no no 0.593 0.418 0.335 1e-20
Q93YW8361 GDSL esterase/lipase At4g no no 0.375 0.271 0.514 3e-20
Q9FK75362 GDSL esterase/lipase At5g no no 0.386 0.279 0.475 2e-19
>sp|Q8LFJ9|GLIP7_ARATH GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1 Back     alignment and function desciption
 Score =  114 bits (286), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 8/161 (4%)

Query: 107 RLYNLGARKIVMFEIGPIGCIPS----ITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNL 162
           RLYNLGARK+V+   GP+GCIPS    +T  N  T  CV   N +VS FN+ L  +   L
Sbjct: 206 RLYNLGARKMVLAGSGPLGCIPSQLSMVTGNN--TSGCVTKINNMVSMFNSRLKDLANTL 263

Query: 163 TSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCC-IAWFNGTSGCIPFLKPCSNAN 221
            + L GS FV  +   L +D V+NP +YGLV S+  CC    + G   C+P  +PC + N
Sbjct: 264 NTTLPGSFFVYQNVFDLFHDMVVNPSRYGLVVSNEACCGNGRYGGALTCLPLQQPCLDRN 323

Query: 222 QHYFWDAYHLTEAMYSLFASHCINDKS-FCEPFNLKELVKM 261
           Q+ FWDA+H TE    + A +  +  + +  P ++ EL K+
Sbjct: 324 QYVFWDAFHPTETANKIIAHNTFSKSANYSYPISVYELAKL 364

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9FNP2|GDL75_ARATH GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1 Back     alignment and function description
>sp|Q9SF78|GDL29_ARATH GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIF5|GDL32_ARATH GDSL esterase/lipase At2g03980 OS=Arabidopsis thaliana GN=At2g03980 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIF3|GDL33_ARATH GDSL esterase/lipase At2g04020 OS=Arabidopsis thaliana GN=At2g04020 PE=2 SV=2 Back     alignment and function description
>sp|O64469|GDL37_ARATH GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1 Back     alignment and function description
>sp|O23470|GDL64_ARATH GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=3 SV=2 Back     alignment and function description
>sp|Q8L5Z1|GDL17_ARATH GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1 Back     alignment and function description
>sp|Q93YW8|GDL65_ARATH GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1 Back     alignment and function description
>sp|Q9FK75|GDL82_ARATH GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query261
224119252356 predicted protein [Populus trichocarpa] 0.590 0.432 0.703 9e-61
224120728349 predicted protein [Populus trichocarpa] 0.590 0.441 0.696 2e-58
356573743359 PREDICTED: GDSL esterase/lipase 7-like [ 0.590 0.428 0.645 4e-57
255569982354 zinc finger protein, putative [Ricinus c 0.590 0.435 0.689 1e-55
359488323 366 PREDICTED: GDSL esterase/lipase 7-like [ 0.590 0.420 0.593 1e-49
298204435359 unnamed protein product [Vitis vinifera] 0.582 0.423 0.545 8e-47
359488321359 PREDICTED: LOW QUALITY PROTEIN: GDSL est 0.582 0.423 0.545 1e-46
255569980352 zinc finger protein, putative [Ricinus c 0.590 0.437 0.596 2e-45
449442425303 PREDICTED: GDSL esterase/lipase At1g2967 0.973 0.838 0.403 3e-42
2244981340 proline-rich, APG like protein [Arabidop 0.980 0.752 0.351 1e-38
>gi|224119252|ref|XP_002331265.1| predicted protein [Populus trichocarpa] gi|222873690|gb|EEF10821.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  239 bits (610), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 109/155 (70%), Positives = 128/155 (82%), Gaps = 1/155 (0%)

Query: 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCL 166
           RL++LGARK+VM+EIGPIGCIPS+TRKNKH G+CVE+ NQLV+YFN+ L  MLQNLTS L
Sbjct: 203 RLHSLGARKVVMYEIGPIGCIPSMTRKNKHNGKCVEESNQLVAYFNDNLLGMLQNLTSTL 262

Query: 167 EGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFW 226
             S FV GHAHWLGYDA+INP KYGL+D+SNPCC  W NGTS CIP LKPC N NQHYF+
Sbjct: 263 PNSIFVRGHAHWLGYDAIINPSKYGLLDTSNPCCKTWANGTSACIPELKPCPNPNQHYFF 322

Query: 227 DAYHLTEAMYSLFASHCINDKSFCEPFNLKELVKM 261
           D YHLTE +YS+ A  CIND+S C P  L+ELV++
Sbjct: 323 DGYHLTETVYSVLAGACINDRSVCSP-TLRELVQV 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224120728|ref|XP_002330937.1| predicted protein [Populus trichocarpa] gi|222873131|gb|EEF10262.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356573743|ref|XP_003555016.1| PREDICTED: GDSL esterase/lipase 7-like [Glycine max] Back     alignment and taxonomy information
>gi|255569982|ref|XP_002525954.1| zinc finger protein, putative [Ricinus communis] gi|223534783|gb|EEF36474.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359488323|ref|XP_002278423.2| PREDICTED: GDSL esterase/lipase 7-like [Vitis vinifera] gi|298204436|emb|CBI16916.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|298204435|emb|CBI16915.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359488321|ref|XP_003633741.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase 7-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255569980|ref|XP_002525953.1| zinc finger protein, putative [Ricinus communis] gi|223534782|gb|EEF36473.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449442425|ref|XP_004138982.1| PREDICTED: GDSL esterase/lipase At1g29670-like [Cucumis sativus] gi|449526581|ref|XP_004170292.1| PREDICTED: GDSL esterase/lipase At1g29670-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|2244981|emb|CAB10402.1| proline-rich, APG like protein [Arabidopsis thaliana] gi|7268372|emb|CAB78665.1| proline-rich, APG like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query261
TAIR|locus:2143156364 GLIP7 "AT5G15720" [Arabidopsis 0.586 0.420 0.403 1.1e-54
TAIR|locus:2824531384 AT1G71691 "AT1G71691" [Arabido 0.590 0.401 0.382 1.1e-50
TAIR|locus:2159547385 AT5G08460 "AT5G08460" [Arabido 0.436 0.296 0.508 2.3e-50
TAIR|locus:505006166370 AT1G33811 "AT1G33811" [Arabido 0.394 0.278 0.508 1.8e-46
TAIR|locus:2032333374 AT1G71250 "AT1G71250" [Arabido 0.578 0.403 0.331 1.1e-41
TAIR|locus:2151953376 AT5G55050 "AT5G55050" [Arabido 0.360 0.25 0.509 2.2e-41
TAIR|locus:2049661367 AT2G03980 "AT2G03980" [Arabido 0.352 0.250 0.536 2.5e-41
TAIR|locus:2013658364 AT1G29660 "AT1G29660" [Arabido 0.590 0.423 0.322 5.4e-41
TAIR|locus:2145969366 AT5G33370 "AT5G33370" [Arabido 0.356 0.254 0.515 6.5e-41
TAIR|locus:2171948362 AT5G45670 "AT5G45670" [Arabido 0.379 0.273 0.485 8.4e-41
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 300 (110.7 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
 Identities = 65/161 (40%), Positives = 92/161 (57%)

Query:   107 RLYNLGARKIVMFEIGPIGCIPS----ITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNL 162
             RLYNLGARK+V+   GP+GCIPS    +T  N  T  CV   N +VS FN+ L  +   L
Sbjct:   206 RLYNLGARKMVLAGSGPLGCIPSQLSMVTGNN--TSGCVTKINNMVSMFNSRLKDLANTL 263

Query:   163 TSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCC-IAWFNGTSGCIPFLKPCSNAN 221
              + L GS FV  +   L +D V+NP +YGLV S+  CC    + G   C+P  +PC + N
Sbjct:   264 NTTLPGSFFVYQNVFDLFHDMVVNPSRYGLVVSNEACCGNGRYGGALTCLPLQQPCLDRN 323

Query:   222 QHYFWDAYHLTEAMYSLFASHCINDKS-FCEPFNLKELVKM 261
             Q+ FWDA+H TE    + A +  +  + +  P ++ EL K+
Sbjct:   324 QYVFWDAFHPTETANKIIAHNTFSKSANYSYPISVYELAKL 364
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0016298 "lipase activity" evidence=ISS
TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159547 AT5G08460 "AT5G08460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006166 AT1G33811 "AT1G33811" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151953 AT5G55050 "AT5G55050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049661 AT2G03980 "AT2G03980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013658 AT1G29660 "AT1G29660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145969 AT5G33370 "AT5G33370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171948 AT5G45670 "AT5G45670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_scaffold_165000024
hypothetical protein (356 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query261
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 1e-37
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 2e-33
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 2e-20
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 2e-15
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 3e-14
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 3e-07
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 6e-07
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 7e-06
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 7e-05
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  134 bits (339), Expect = 1e-37
 Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 3/102 (2%)

Query: 13  PALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLP 72
           PAL+VFGDSL D+GNNN LPT+A+AN+ PYG +F  +  TGRF+NG+ + DF+AE LGLP
Sbjct: 1   PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLP 59

Query: 73  YSPPFLK--IRDKLPLTGLNYASGSCGILPETGRPFRLYNLG 112
             PP           LTG+N+ASG  GIL  TG    + +L 
Sbjct: 60  LLPPPYLSPNGSSDFLTGVNFASGGAGILDSTGFLGSVISLS 101

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 261
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.83
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 98.49
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 98.35
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 98.29
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 98.29
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 98.2
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 98.15
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 97.95
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 97.8
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 97.77
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 97.75
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 97.68
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 97.64
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 97.56
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 97.54
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 97.42
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 97.37
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 97.27
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 97.1
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 96.98
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 96.88
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 96.88
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 96.84
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 96.83
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 96.77
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 96.42
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 96.38
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 96.34
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 96.2
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 96.08
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 95.4
KOG3670397 consensus Phospholipase [Lipid transport and metab 90.69
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 84.1
COG2755216 TesA Lysophospholipase L1 and related esterases [A 81.43
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-67  Score=482.40  Aligned_cols=242  Identities=35%  Similarity=0.599  Sum_probs=215.1

Q ss_pred             cccCCCCCeEEEcCCcccccCCCCCccccccCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHhcCC-CCCCCcccc--cC
Q 046708            6 SSATQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGL-PYSPPFLKI--RD   82 (261)
Q Consensus         6 ~~~~~~~~~l~vFGDSlsDtGn~~~~~~~~~~~~~Pyg~~~~~~~~~gRfSnG~~~~d~la~~lgl-~~~~~y~~~--~~   82 (261)
                      +.+...+++|||||||++|+||++++.+..+++.||||++||+++|+||||||++|+||||+.||+ +.+|||+..  .+
T Consensus        21 ~~~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~  100 (351)
T PLN03156         21 AETCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNI  100 (351)
T ss_pred             hcccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCc
Confidence            344667999999999999999998776666788999999999878999999999999999999999 788999873  24


Q ss_pred             CCCCCCceeeccCCCcCCCCC----------cc---------------------------c-------------------
Q 046708           83 KLPLTGLNYASGSCGILPETG----------RP---------------------------F-------------------  106 (261)
Q Consensus        83 ~~~~~G~NfA~~Ga~~~~~~~----------ql---------------------------F-------------------  106 (261)
                      .++.+|+|||+||+++++.++          |+                           |                   
T Consensus       101 ~~~~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~  180 (351)
T PLN03156        101 SDFATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGR  180 (351)
T ss_pred             hhhcccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhccccc
Confidence            578999999999998875431          22                           0                   


Q ss_pred             ----------------------hheccCCcEEEEecCCCCCccCceecccC-CCCcchhhhHHHHHHHHHHHHHHHHHhh
Q 046708          107 ----------------------RLYNLGARKIVMFEIGPIGCIPSITRKNK-HTGRCVEDKNQLVSYFNNMLPTMLQNLT  163 (261)
Q Consensus       107 ----------------------~L~~~GAr~~vv~~lp~lg~~P~~~~~~~-~~~~~~~~~~~~~~~~N~~L~~~l~~l~  163 (261)
                                            +||++|||+|+|+|+||+||+|..+.... ...+|.+.+|.+++.||++|+++|++|+
T Consensus       181 ~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~  260 (351)
T PLN03156        181 RSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLN  260 (351)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence                                  89999999999999999999998765421 1357999999999999999999999999


Q ss_pred             hhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccc-cCCccCcCCCC-CCCCCCCccEEecCCChHHHHHHHHHH
Q 046708          164 SCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAW-FNGTSGCIPFL-KPCSNANQHYFWDAYHLTEAMYSLFAS  241 (261)
Q Consensus       164 ~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g-~~~~~~C~~~~-~~C~~p~~y~fwD~vHPT~~~h~~iA~  241 (261)
                      +++||++|+++|+|.++.++++||++|||++++++||+.| ++....|++.. .+|++|++|+|||++|||+++|+++|+
T Consensus       261 ~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~  340 (351)
T PLN03156        261 KELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIAN  340 (351)
T ss_pred             HhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHHHHH
Confidence            9999999999999999999999999999999999999988 77778899755 589999999999999999999999999


Q ss_pred             HHHcCC
Q 046708          242 HCINDK  247 (261)
Q Consensus       242 ~~~~~~  247 (261)
                      .++++.
T Consensus       341 ~~~~~l  346 (351)
T PLN03156        341 HVVKTL  346 (351)
T ss_pred             HHHHHH
Confidence            999863

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query261
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 2e-23
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 2e-22
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score = 98.3 bits (244), Expect = 2e-23
 Identities = 19/108 (17%), Positives = 29/108 (26%), Gaps = 5/108 (4%)

Query: 3   RKISSATQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVP 62
             + + +     L VFGDSL D+G        A +             +      G T P
Sbjct: 7   HHLEAPSPY-STLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAP 65

Query: 63  DFVAEFLGLP--YSPPFLKIRDKLP--LTGLNYASGSCGILPETGRPF 106
             +   LG+            +       G N+A G            
Sbjct: 66  MLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSIT 113
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query261
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.17
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 98.63
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 98.62
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 98.32
2hsj_A214 Putative platelet activating factor; structr genom 98.3
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 98.14
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 98.11
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 97.89
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 97.84
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 97.81
1vjg_A218 Putative lipase from the G-D-S-L family; structura 97.64
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 97.62
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 97.58
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 97.52
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 97.5
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 97.28
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 97.19
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 95.98
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 95.54
3bzw_A274 Putative lipase; protein structure initiative II, 94.66
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 93.24
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 93.22
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 90.62
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 86.19
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 82.55
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=2.2e-54  Score=422.22  Aligned_cols=233  Identities=23%  Similarity=0.272  Sum_probs=193.5

Q ss_pred             cCCCCCeEEEcCCcccccCCCCCcccccc-C-C-CCCCCCCCCCCCCcccCC-CCCCHHHHHHHhcCCCC--CCCcccc-
Q 046708            8 ATQLAPALYVFGDSLFDSGNNNLLPTIAR-A-N-YLPYGANFVNKSSTGRFT-NGKTVPDFVAEFLGLPY--SPPFLKI-   80 (261)
Q Consensus         8 ~~~~~~~l~vFGDSlsDtGn~~~~~~~~~-~-~-~~Pyg~~~~~~~~~gRfS-nG~~~~d~la~~lgl~~--~~~y~~~-   80 (261)
                      .+++|++||+||||||||||+........ . . ..|.|.+|    .+|||| ||++|+||||+.||+|.  ++||+.. 
T Consensus        11 ~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~~----~~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~   86 (632)
T 3kvn_X           11 APSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTY----QNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPV   86 (632)
T ss_dssp             CCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSSC----CTTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHH
T ss_pred             CCCCCccEEEEccccccCCCcccccCCcCCccccccCCCCcc----ccCcccccCCchHHHHHHHcCCCccccCcccccc
Confidence            47799999999999999999843322110 0 1 11237788    489999 99999999999999983  5667642 


Q ss_pred             -cCCCCCCCceeeccCCCc---CCC-----------CCcc-----------------------c----------------
Q 046708           81 -RDKLPLTGLNYASGSCGI---LPE-----------TGRP-----------------------F----------------  106 (261)
Q Consensus        81 -~~~~~~~G~NfA~~Ga~~---~~~-----------~~ql-----------------------F----------------  106 (261)
                       .++++.+|+|||+|||++   ++.           ..||                       |                
T Consensus        87 ~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~~  166 (632)
T 3kvn_X           87 NAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQGLGADPNALYYITGGGNDFLQGRILN  166 (632)
T ss_dssp             HHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHTTTCCCCTTSEEEECCSHHHHHTTCCCS
T ss_pred             ccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhhccCccCCCCEEEEEEechhhhcccccC
Confidence             256789999999999995   211           0011                       0                


Q ss_pred             ----------------hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCce
Q 046708          107 ----------------RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGST  170 (261)
Q Consensus       107 ----------------~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~  170 (261)
                                      +||++|||+|+|+++||+||+|.+.     ..+|.+.+|++++.||++|+++|++|+     ++
T Consensus       167 ~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~-----~~~c~~~~n~~~~~~N~~L~~~l~~l~-----~~  236 (632)
T 3kvn_X          167 DVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF-----GGPLQPFASQLSGTFNAELTAQLSQAG-----AN  236 (632)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT-----TSTTHHHHHHHHHHHHHHHHHHHHHHC-----CC
T ss_pred             hHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc-----CCCchHHHHHHHHHHHHHHHHHHHhCC-----Ce
Confidence                            8999999999999999999999953     247999999999999999999999996     37


Q ss_pred             EEEecchHHHhhhhhCCCCCCCCCCC--CcccccccCCccCcCCC-----CCCCCCCCccEEecCCChHHHHHHHHHHHH
Q 046708          171 FVNGHAHWLGYDAVINPPKYGLVDSS--NPCCIAWFNGTSGCIPF-----LKPCSNANQHYFWDAYHLTEAMYSLFASHC  243 (261)
Q Consensus       171 i~~~D~y~~~~~ii~nP~~yGf~~~~--~aCc~~g~~~~~~C~~~-----~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~  243 (261)
                      |+++|+|.++.++++||++|||+++.  ++||+.|    ..|++.     ..+|+||++|+|||.+||||++|++||+.+
T Consensus       237 i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g----~~C~~~~~~~~~~~C~~~~~y~fwD~~HpTe~~~~~ia~~~  312 (632)
T 3kvn_X          237 VIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSG----NGCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYT  312 (632)
T ss_dssp             EEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSC----TTSCBCTTTSTTSSSCCGGGCSBSSSSCBCHHHHHHHHHHH
T ss_pred             EEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCC----CccCCcccccccccCCCccceEEecCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999864  6999875    268763     468999999999999999999999999999


Q ss_pred             HcCCCCcCCCChHHhhc
Q 046708          244 INDKSFCEPFNLKELVK  260 (261)
Q Consensus       244 ~~~~~~~~P~~~~~l~~  260 (261)
                      +++  +..|+++++|++
T Consensus       313 ~~~--~~~P~~~~~l~~  327 (632)
T 3kvn_X          313 YSL--LSAPWELTLLPE  327 (632)
T ss_dssp             HHH--HHTHHHHTTHHH
T ss_pred             Hhc--cCCCccHHHHHH
Confidence            997  789999999875
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query261
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.06
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 98.67
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 98.56
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 98.26
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.03
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 97.46
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 97.17
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 97.05
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 96.82
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 95.69
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 92.17
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.06  E-value=6.1e-10  Score=95.33  Aligned_cols=83  Identities=6%  Similarity=-0.183  Sum_probs=51.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccccCCccCcCCCCCCCCCC
Q 046708          141 VEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNA  220 (261)
Q Consensus       141 ~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p  220 (261)
                      ...++.+...+|+.+++..+    +   ..+.++|++..|..       +++-...++|...         .......++
T Consensus       214 ~~~~~~~~~~~n~~i~~~A~----~---~~v~~vd~~~~f~~-------~~~c~~~~~~~~~---------~~~~~~~~~  270 (302)
T d1esca_         214 LPVLDQIQKRLNDAMKKAAA----D---GGADFVDLYAGTGA-------NTACDGADRGIGG---------LLEDSQLEL  270 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH----T---TTCEEECTGGGCTT-------SSTTSTTSCSBCC---------SSSEEEEES
T ss_pred             HHHHHHHHHHHHHHHHHHHH----H---cCCEEEechhhhcc-------ccccccccccccc---------ccccccccc
Confidence            34556777778877776532    2   24678899987642       2221111222111         001112357


Q ss_pred             CccEEecCCChHHHHHHHHHHHHHcC
Q 046708          221 NQHYFWDAYHLTEAMYSLFASHCIND  246 (261)
Q Consensus       221 ~~y~fwD~vHPT~~~h~~iA~~~~~~  246 (261)
                      ..+++||.+|||+++|++||+.+.+.
T Consensus       271 ~~~~~~d~~HPn~~G~~~iA~~i~~~  296 (302)
T d1esca_         271 LGTKIPWYAHPNDKGRDIQAKQVADK  296 (302)
T ss_dssp             SSCEEECSSCBCHHHHHHHHHHHHHH
T ss_pred             ccccccCCcCCCHHHHHHHHHHHHHH
Confidence            88999999999999999999999873
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure