Citrus Sinensis ID: 046721

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------107

MEQQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRLHIPTIDRSYGEPPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQDSSDSEESDDDEFFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSRAVVMEPQERKVHALIQHLKLIRNEKMKKRKLKEARKRNEVEAERAKDKQLTRKRQRGERQERYREQDKLKKKIRVH

cccccccccccccccccHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccHHHHHHHHHHHHHccccccccccEEEEcccCEEEEEEEccccHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHHcccccccccEEEEcccccccccccHHHHHHHHHHHHcccccccccccccEEEEEcccccccccccccccccccEEEEEEEEEccccccccEEEEcccccEEEccccccccccccccHHHcccccccccccccccccccccEEccccEEEEccccccccccccccHHHHHHccccccccHHHHHccccccccccccccccccccccccccccHHcccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccEEEEEEccccHHHHHcccccccEEEECcccccccccccccccccccEEEEEEEEEEEEEEEEEEEcccccCEEEcccccccEEEEEEEECcccccccEEEEEEccccccccEEEEEEEEEcccccEEEEEEEEECcccEEEECcEEEEEEccccHHHHHcccccEEEEccccccHHHHccccccccccccccccccccCEEEEEccccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc

**********************************************************************YGEPPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYSLAGVTGLADPCPL**********DKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFS*YQDVGVTLVKSLQNTKYPIDKKLEKSIISLF************************************************ESLHEDADVKK*********KKSFGQCTNLIQLVYG********************************************RLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTG****************************************************************************GAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKE**************EGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQA****************************PQERKVHALIQHLKLI*******************************************************

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MEQQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRLHIPTIDRSYGEPPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQDSSDSEESDDDEFFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSRAVVMEPQERKVHALIQHLKLxxxxxxxxxxxxxxxxxxxxxxxxxxxxQLTRKRQRGERQERYREQDKLKKKIRVH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Ribosome biogenesis protein bms1	May act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus.	probable	O94653

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2C78, chain A
Confidence level:confident
Coverage over the Query: 74-259,270-308
View the alignment between query and template
View the model in PyMOL

Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 1009-1066
View the alignment between query and template
View the model in PyMOL