Citrus Sinensis ID: 046873
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | ||||||
| 255572593 | 672 | kinase, putative [Ricinus communis] gi|2 | 0.946 | 0.421 | 0.646 | 1e-100 | |
| 255572599 | 652 | kinase, putative [Ricinus communis] gi|2 | 0.983 | 0.450 | 0.587 | 2e-95 | |
| 224074307 | 651 | predicted protein [Populus trichocarpa] | 0.936 | 0.430 | 0.575 | 1e-86 | |
| 357517119 | 651 | Wall-associated receptor kinase-like pro | 0.963 | 0.442 | 0.543 | 3e-83 | |
| 357517145 | 651 | Cysteine-rich receptor-like protein kina | 0.963 | 0.442 | 0.543 | 3e-83 | |
| 297736692 | 255 | unnamed protein product [Vitis vinifera] | 0.806 | 0.945 | 0.636 | 9e-79 | |
| 449460754 | 688 | PREDICTED: L-type lectin-domain containi | 0.939 | 0.408 | 0.515 | 3e-76 | |
| 15238190 | 651 | concanavalin A-like lectin kinase-like p | 0.983 | 0.451 | 0.521 | 5e-76 | |
| 449531003 | 659 | PREDICTED: LOW QUALITY PROTEIN: L-type l | 0.939 | 0.426 | 0.512 | 9e-76 | |
| 255566153 | 633 | kinase, putative [Ricinus communis] gi|2 | 0.983 | 0.464 | 0.501 | 3e-75 |
| >gi|255572593|ref|XP_002527230.1| kinase, putative [Ricinus communis] gi|223533406|gb|EEF35156.1| kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 224/291 (76%), Gaps = 8/291 (2%)
Query: 15 PSANSVSFRMSSFDSNRKDIIYQGDAVPSVGAIELIKNYQYLCRVGWATYADRVPLWNSD 74
P ANSV+F + F++ +I YQGDA PSVGA+ELI YLCRVGW TY + VPLW+S
Sbjct: 40 PPANSVNFTIPRFNNEASNIQYQGDAAPSVGAVELISQLAYLCRVGWVTYGESVPLWDST 99
Query: 75 TGELADFSTKFSFQINTLDRSTYGHGLVFFLAPVGFQIPPNADGGFLGLFNTTTSFSSSN 134
TG+L+DFST FSF I+T RSTYGHG+VFFLAPVGFQIPPN+ GGFLGLFNT+TS SS N
Sbjct: 100 TGKLSDFSTHFSFIIDTQGRSTYGHGIVFFLAPVGFQIPPNSAGGFLGLFNTSTSDSSKN 159
Query: 135 HIVHVEFDTFFNSEWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNSTTK 194
IV VEFD+F N EWDP HVGINNNSIASAV+T WNASFHS D AD I YNS TK
Sbjct: 160 QIVTVEFDSFSNEEWDPP--VGHVGINNNSIASAVYTPWNASFHSGDIADAWITYNSITK 217
Query: 195 NLSVSWTYRQTSDPRENTSLFYIIDLMKVLPQWVTIGFSAATGLSGERHILESWEFSSSL 254
NLSV WTY++TS+P EN+SL YIIDLMKVLP+ VTIGFSAATG +G RH L+SWEFSSSL
Sbjct: 218 NLSVFWTYKETSNPGENSSLSYIIDLMKVLPEQVTIGFSAATGQNGARHSLQSWEFSSSL 277
Query: 255 DMKQRNGTDGKKIRIIVSVTVSIG---VLVAGMITGLLILRRHK---KKER 299
+K ++G + KK ++IV V+ S+ ++ A +I L+I RR K KK+R
Sbjct: 278 VVKGKHGNELKKTQVIVGVSASVSGCLLIAAAVILALVISRRRKQIMKKKR 328
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255572599|ref|XP_002527233.1| kinase, putative [Ricinus communis] gi|223533409|gb|EEF35159.1| kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224074307|ref|XP_002304348.1| predicted protein [Populus trichocarpa] gi|222841780|gb|EEE79327.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|357517119|ref|XP_003628848.1| Wall-associated receptor kinase-like protein [Medicago truncatula] gi|355522870|gb|AET03324.1| Wall-associated receptor kinase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357517145|ref|XP_003628861.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355522883|gb|AET03337.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297736692|emb|CBI25709.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449460754|ref|XP_004148110.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|15238190|ref|NP_196615.1| concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] gi|75335609|sp|Q9LXA5.1|LRK91_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IX.1; Short=LecRK-IX.1; Flags: Precursor gi|7671450|emb|CAB89390.1| lectin-like protein kinase-like [Arabidopsis thaliana] gi|91806848|gb|ABE66151.1| lectin protein kinase [Arabidopsis thaliana] gi|332004177|gb|AED91560.1| concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449531003|ref|XP_004172477.1| PREDICTED: LOW QUALITY PROTEIN: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255566153|ref|XP_002524064.1| kinase, putative [Ricinus communis] gi|223536632|gb|EEF38274.1| kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | ||||||
| TAIR|locus:2142499 | 651 | AT5G10530 [Arabidopsis thalian | 0.983 | 0.451 | 0.49 | 2.7e-68 | |
| TAIR|locus:2155685 | 675 | AT5G65600 [Arabidopsis thalian | 0.986 | 0.437 | 0.424 | 3.9e-60 | |
| UNIPROTKB|P02870 | 275 | P02870 "Lectin" [Lens culinari | 0.799 | 0.869 | 0.355 | 2e-33 | |
| UNIPROTKB|Q40987 | 270 | NLEC1 "Nodule lectin" [Pisum s | 0.779 | 0.862 | 0.364 | 1.5e-28 | |
| UNIPROTKB|Q70DJ5 | 280 | Q70DJ5 "Alpha-methyl-mannoside | 0.802 | 0.857 | 0.310 | 6.4e-28 | |
| UNIPROTKB|P42088 | 240 | P42088 "Lectin" [Leucomphalos | 0.779 | 0.970 | 0.350 | 5.9e-25 | |
| UNIPROTKB|P02866 | 290 | P02866 "Concanavalin-A" [Canav | 0.806 | 0.831 | 0.312 | 4.2e-24 | |
| UNIPROTKB|P14894 | 290 | P14894 "Concanavalin-A" [Canav | 0.806 | 0.831 | 0.308 | 1.8e-23 | |
| TAIR|locus:2084375 | 677 | AT3G53810 [Arabidopsis thalian | 0.816 | 0.360 | 0.270 | 1.2e-17 | |
| UNIPROTKB|P81517 | 236 | P81517 "Lectin alpha chain" [C | 0.408 | 0.516 | 0.390 | 1.8e-16 |
| TAIR|locus:2142499 AT5G10530 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 147/300 (49%), Positives = 193/300 (64%)
Query: 3 NITLFIFIIVLVPSANSVSFRMSSFDSNRKDIIYQGDAVPSVGAIELIKNYQYLCRVGWA 62
+I LF F++VL P SV F +S F S+ +I YQGDA + GA+EL N Y CR GWA
Sbjct: 4 SILLFSFVLVL-PFVCSVQFNISRFGSDVSEIAYQGDARAN-GAVELT-NIDYTCRAGWA 60
Query: 63 TYADRVPLWNSDTGELADFSTKFSFQINT--LDRSTYGHGLVFFLAPVGFQIPPNADXXX 120
TY +VPLWN T + +DFST+FSF+I+T + YGHG FFLAP Q+PPN+
Sbjct: 61 TYGKQVPLWNPGTSKPSDFSTRFSFRIDTRNVGYGNYGHGFAFFLAPARIQLPPNSAGGF 120
Query: 121 XXXXXXXXXXXXXXHIVHVEFDTFFNSEWDPSGVQDHVGINNNSIASAVHTRWNASFHSE 180
+V+VEFDTF N EWDP V+ HVGINNNS+ S+ +T WNA+ H++
Sbjct: 121 LGLFNGTNNQSSAFPLVYVEFDTFTNPEWDPLDVKSHVGINNNSLVSSNYTSWNATSHNQ 180
Query: 181 DTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLMKVLPQWVTIGFSAATGLSG 240
D V I Y+S +NLSVSWTY TSDP EN+SL YIIDL KVLP VTIGFSA +G
Sbjct: 181 DIGRVLIFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIGFSATSGGVT 240
Query: 241 ERHILESWEFSSSLDMKQRNGTDGKKIRIIVSVTVSIGVLVAGMITGLLI-LRRHKKKER 299
E + L SWEFSSSL++ + K +I+ ++VS VL+ IT L++ L+R ++K++
Sbjct: 241 EGNRLLSWEFSSSLELIDIKKSQNDKKGMIIGISVSGFVLLTFFITSLIVFLKRKQQKKK 300
|
|
| TAIR|locus:2155685 AT5G65600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P02870 P02870 "Lectin" [Lens culinaris (taxid:3864)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q40987 NLEC1 "Nodule lectin" [Pisum sativum (taxid:3888)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q70DJ5 Q70DJ5 "Alpha-methyl-mannoside-specific lectin" [Arachis hypogaea (taxid:3818)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P42088 P42088 "Lectin" [Leucomphalos mildbraedii (taxid:28956)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P02866 P02866 "Concanavalin-A" [Canavalia ensiformis (taxid:3823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P14894 P14894 "Concanavalin-A" [Canavalia gladiata (taxid:3824)] | Back alignment and assigned GO terms |
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| TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P81517 P81517 "Lectin alpha chain" [Cratylia argentea (taxid:83131)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 299 | |||
| cd06899 | 236 | cd06899, lectin_legume_LecRK_Arcelin_ConA, legume | 9e-84 | |
| pfam00139 | 231 | pfam00139, Lectin_legB, Legume lectin domain | 1e-62 | |
| cd01951 | 223 | cd01951, lectin_L-type, legume lectins | 6e-20 | |
| cd07308 | 218 | cd07308, lectin_leg-like, legume-like lectins: ERG | 0.002 |
| >gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 9e-84
Identities = 105/240 (43%), Positives = 143/240 (59%), Gaps = 9/240 (3%)
Query: 20 VSFRMSSFDSNRKDIIYQGDA-VPSVGAIELIKNYQYLCRVGWATYADRVPLWNSDTGEL 78
+SF + F S++ ++ QGDA + S GA++L + VG A Y+ V LW+S TG++
Sbjct: 1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKV 60
Query: 79 ADFSTKFSFQINTLDRSTYGHGLVFFLAPVGFQIPPNADGGFLGLFNTTTSFSSSNHIVH 138
A FST FSF I + S G GL FFLAP PP + GG+LGLFN++ + +SSNHIV
Sbjct: 61 ASFSTSFSFSITPPNPSLGGDGLAFFLAPTDSL-PPASSGGYLGLFNSSNNGNSSNHIVA 119
Query: 139 VEFDTFFNSEW-DPSGVQDHVGINNNSIASAVHTRWNAS---FHSEDTADVRIAYNSTTK 194
VEFDTF N E+ DP +HVGI+ NS+ S W+ S I Y+S++K
Sbjct: 120 VEFDTFQNPEFGDPDD--NHVGIDVNSLVSVKAGYWDDDGGKLKSGKPMQAWIDYDSSSK 177
Query: 195 NLSVSWTYRQTSDPRENTSLFYIIDLMKVLPQWVTIGFSAATGLSGERHILESWEFSSSL 254
LSV+ Y + P + L Y +DL KVLP+ V +GFSA+TGL E H + SW FSS+
Sbjct: 178 RLSVTLAYSGVAKP-KKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSNG 236
|
This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236 |
| >gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain | Back alignment and domain information |
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| >gnl|CDD|173886 cd01951, lectin_L-type, legume lectins | Back alignment and domain information |
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| >gnl|CDD|173892 cd07308, lectin_leg-like, legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| cd06899 | 236 | lectin_legume_LecRK_Arcelin_ConA legume lectins, l | 100.0 | |
| PF00139 | 236 | Lectin_legB: Legume lectin domain; InterPro: IPR00 | 100.0 | |
| cd01951 | 223 | lectin_L-type legume lectins. The L-type (legume-t | 100.0 | |
| cd07308 | 218 | lectin_leg-like legume-like lectins: ERGIC-53, ERG | 99.95 | |
| cd06901 | 248 | lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr | 99.89 | |
| cd06902 | 225 | lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran | 99.88 | |
| PF03388 | 229 | Lectin_leg-like: Legume-like lectin family; InterP | 99.8 | |
| cd06903 | 215 | lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem | 99.78 | |
| KOG3839 | 351 | consensus Lectin VIP36, involved in the transport | 99.67 | |
| KOG3838 | 497 | consensus Mannose lectin ERGIC-53, involved in gly | 99.5 | |
| cd06900 | 255 | lectin_VcfQ VcfQ bacterial pilus biogenesis protei | 99.21 | |
| PF08693 | 40 | SKG6: Transmembrane alpha-helix domain; InterPro: | 95.69 | |
| PF15065 | 350 | NCU-G1: Lysosomal transcription factor, NCU-G1 | 95.29 | |
| PF04478 | 154 | Mid2: Mid2 like cell wall stress sensor; InterPro: | 91.79 | |
| KOG3514 | 1591 | consensus Neurexin III-alpha [Signal transduction | 90.9 | |
| PF15102 | 146 | TMEM154: TMEM154 protein family | 86.82 | |
| smart00282 | 135 | LamG Laminin G domain. | 85.8 | |
| PF14610 | 189 | DUF4448: Protein of unknown function (DUF4448) | 82.93 | |
| PTZ00382 | 96 | Variant-specific surface protein (VSP); Provisiona | 82.7 | |
| cd00110 | 151 | LamG Laminin G domain; Laminin G-like domains are | 80.92 | |
| PF05454 | 290 | DAG1: Dystroglycan (Dystrophin-associated glycopro | 80.7 |
| >cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-59 Score=420.20 Aligned_cols=230 Identities=45% Similarity=0.723 Sum_probs=206.7
Q ss_pred eeEEeCCCCCCCCCeEEecceEee-CCeEEecCCCCccccEEEEEeCCCeeccCCCCCCceeeEEEEEEEEeecCCCCCc
Q 046873 20 VSFRMSSFDSNRKDIIYQGDAVPS-VGAIELIKNYQYLCRVGWATYADRVPLWNSDTGELADFSTKFSFQINTLDRSTYG 98 (299)
Q Consensus 20 ~~F~f~~F~~~~~~l~l~GdA~~~-~g~l~LT~~~~~~~~~Gr~~y~~Pi~l~~~~t~~~asFst~F~F~I~~~~~~~~g 98 (299)
++|+|++|.....+|.++|+|.+. ++.|+||++.+..+++|||||++||+||++.+++++||+|+|+|+|.+.....+|
T Consensus 1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~~~~~~sFst~F~F~i~~~~~~~~g 80 (236)
T cd06899 1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKVASFSTSFSFSITPPNPSLGG 80 (236)
T ss_pred CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCCCCCceeEEEEEEEEEEcCCCCCCC
Confidence 479999998645789999999998 7999999982127899999999999999999999999999999999987667789
Q ss_pred cceEEEEcccCCCCCCCCCCCccccccCCCCCCCCccEEEEEEecccCCC-CCCCCCCCceEEecCCCcceeeeeccc--
Q 046873 99 HGLVFFLAPVGFQIPPNADGGFLGLFNTTTSFSSSNHIVHVEFDTFFNSE-WDPSGVQDHVGINNNSIASAVHTRWNA-- 175 (299)
Q Consensus 99 DGlAF~l~p~~~~~p~~~~G~~LGl~~~~~~~~~~~~~vAVEFDT~~n~~-~Dp~~~~~HVgIdins~~S~~~~~~~~-- 175 (299)
|||||+|+|.+.. +.+..|++|||.+.++++...++.|||||||++|.+ +||+. +|||||+|++.|..+.+|..
T Consensus 81 dGlAF~i~~~~~~-~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~--nHigIdvn~~~S~~~~~~~~~~ 157 (236)
T cd06899 81 DGLAFFLAPTDSL-PPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDD--NHVGIDVNSLVSVKAGYWDDDG 157 (236)
T ss_pred CeEEEEEecCCCC-CCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCC--CeEEEEcCCcccceeecccccc
Confidence 9999999998743 346889999999887666678899999999999987 69999 99999999998888777753
Q ss_pred -ccCCCCeeEEEEEEeCCCCeEEEEEeecCCCCCCCcceEEEeeccccccCceeEEEEEeecCCccccEEEEEEEEEec
Q 046873 176 -SFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLMKVLPQWVTIGFSAATGLSGERHILESWEFSSS 253 (299)
Q Consensus 176 -~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~~~~ls~~vdL~~~l~~~v~vGFSAsTG~~~~~h~IlsWsF~s~ 253 (299)
++.+|+.++|||+||+.+++|+|+|++.+. .+|..|++++.+||+++|+++|||||||+||...|.|+|++|+|+++
T Consensus 158 ~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~-~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~~~~h~i~sWsF~s~ 235 (236)
T cd06899 158 GKLKSGKPMQAWIDYDSSSKRLSVTLAYSGV-AKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSN 235 (236)
T ss_pred ccccCCCeEEEEEEEcCCCCEEEEEEEeCCC-CCCcCCEEEEeccHHHhCCCceEEEEEeEcCCCcceEEEEEEEEEcC
Confidence 368999999999999999999999998764 47889999999999999999999999999999999999999999986
|
This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin |
| >PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported | Back alignment and domain information |
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| >cd01951 lectin_L-type legume lectins | Back alignment and domain information |
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| >cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 | Back alignment and domain information |
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| >cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain | Back alignment and domain information |
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| >cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain | Back alignment and domain information |
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| >PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates | Back alignment and domain information |
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| >cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain | Back alignment and domain information |
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| >KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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| >KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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| >cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain | Back alignment and domain information |
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| >PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ] | Back alignment and domain information |
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| >PF15065 NCU-G1: Lysosomal transcription factor, NCU-G1 | Back alignment and domain information |
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| >PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region | Back alignment and domain information |
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| >KOG3514 consensus Neurexin III-alpha [Signal transduction mechanisms] | Back alignment and domain information |
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| >PF15102 TMEM154: TMEM154 protein family | Back alignment and domain information |
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| >smart00282 LamG Laminin G domain | Back alignment and domain information |
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| >PF14610 DUF4448: Protein of unknown function (DUF4448) | Back alignment and domain information |
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| >PTZ00382 Variant-specific surface protein (VSP); Provisional | Back alignment and domain information |
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| >cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans | Back alignment and domain information |
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| >PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 299 | ||||
| 3ujo_A | 281 | Galactose-Specific Seed Lectin From Dolichos Lablab | 6e-31 | ||
| 2bqp_A | 234 | The Structure Of The Pea Lectin-D-Glucopyranose Com | 1e-30 | ||
| 1qnw_A | 242 | Lectin Ii From Ulex Europaeus Length = 242 | 4e-30 | ||
| 2pel_A | 236 | Peanut Lectin Length = 236 | 4e-29 | ||
| 1bzw_A | 232 | Peanut Lectin Complexed With C-Lactose Length = 232 | 5e-29 | ||
| 1fny_A | 237 | Legume Lectin Of The Bark Of Robinia Pseudoacacia. | 5e-29 | ||
| 2sba_A | 253 | Soybean Agglutinin Complexed With 2,6-Pentasacchari | 1e-27 | ||
| 3usu_A | 256 | Crystal Structure Of Butea Monosperma Seed Lectin L | 2e-27 | ||
| 3usu_B | 242 | Crystal Structure Of Butea Monosperma Seed Lectin L | 2e-27 | ||
| 1q8o_A | 252 | Pterocartpus Angolensis Lectin Pal In Complex With | 6e-27 | ||
| 1n3o_A | 252 | Pterocarcpus Angolensis Lectin In Complex With Alph | 6e-27 | ||
| 3ipv_A | 251 | Crystal Structure Of Spatholobus Parviflorus Seed L | 7e-27 | ||
| 1fat_A | 252 | Phytohemagglutinin-L Length = 252 | 2e-26 | ||
| 3zvx_A | 261 | Structure Of The Lectin From Platypodium Elegans In | 2e-26 | ||
| 1g8w_A | 233 | Improved Structure Of Phytohemagglutinin-L From The | 3e-26 | ||
| 3ipv_B | 239 | Crystal Structure Of Spatholobus Parviflorus Seed L | 7e-26 | ||
| 1dbn_A | 239 | Maackia Amurensis Leukoagglutinin (Lectin) With Sia | 4e-25 | ||
| 2eig_A | 234 | Lotus Tetragonolobus Seed Lectin (Isoform) Length = | 4e-25 | ||
| 2fmd_A | 240 | Structural Basis Of Carbohydrate Recognition By Bow | 1e-24 | ||
| 1fx5_A | 242 | Crystal Structure Analysis Of Ulex Europaeus Lectin | 1e-23 | ||
| 1bjq_A | 253 | The Dolichos Biflorus Seed Lectin In Complex With A | 2e-23 | ||
| 1gsl_A | 243 | Lectin (Fourth Isolated From (Griffonia Simplicifol | 2e-23 | ||
| 1hql_A | 257 | The Xenograft Antigen In Complex With The B4 Isolec | 3e-23 | ||
| 1gnz_A | 257 | Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m | 4e-23 | ||
| 2lal_A | 181 | Crystal Structure Determination And Refinement At 2 | 3e-22 | ||
| 1lul_A | 253 | Db58, A Legume Lectin From Dolichos Biflorus Length | 5e-22 | ||
| 2e7q_A | 237 | Crystal Structure Of Basic Winged Bean Lectin In Co | 1e-21 | ||
| 1wbl_A | 241 | Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga | 1e-21 | ||
| 1wbf_A | 242 | Winged Bean Lectin, Saccharide Free Form Length = 2 | 2e-21 | ||
| 1ofs_A | 187 | Pea Lectin-sucrose Complex Length = 187 | 9e-21 | ||
| 2ltn_A | 181 | Design, Expression, And Crystallization Of Recombin | 1e-20 | ||
| 1rin_A | 180 | X-Ray Crystal Structure Of A Pea Lectin-Trimannosid | 1e-20 | ||
| 1n47_A | 233 | Isolectin B4 From Vicia Villosa In Complex With The | 4e-20 | ||
| 1lof_C | 181 | X-Ray Structure Of A Biantennary Octasaccharide-Lec | 9e-20 | ||
| 1loa_A | 181 | Three-Dimensional Structures Of Complexes Of Lathyr | 9e-20 | ||
| 1gz9_A | 239 | High-Resolution Crystal Structure Of Erythrina Cris | 1e-19 | ||
| 1fay_A | 238 | Winged Bean Acidic Lectin Complexed With Methyl-Alp | 2e-19 | ||
| 1lgb_A | 181 | Interaction Of A Legume Lectin With The N2 Fragment | 2e-19 | ||
| 1fyu_A | 255 | Crystal Structure Of Erythrina Corallodendron Lecti | 2e-19 | ||
| 1ax0_A | 239 | Erythrina Corallodendron Lectin In Complex With N-A | 2e-19 | ||
| 1lgc_A | 181 | Interaction Of A Legume Lectin With The N2 Fragment | 2e-19 | ||
| 3n35_A | 242 | Erythrina Corallodendron Lectin Mutant (Y106g) With | 3e-19 | ||
| 1uzy_A | 242 | Erythrina Crystagalli Lectin Length = 242 | 3e-19 | ||
| 1sfy_A | 239 | Crystal Structure Of Recombinant Erythrina Corallod | 3e-19 | ||
| 1lte_A | 239 | Structure Of A Legume Lectin With An Ordered N-Link | 5e-19 | ||
| 2b7y_A | 182 | Fava Bean Lectin-Glucose Complex Length = 182 | 6e-19 | ||
| 1qmo_E | 133 | Structure Of Fril, A Legume Lectin That Delays Hema | 2e-17 | ||
| 1dhk_B | 223 | Structure Of Porcine Pancreatic Alpha-Amylase Lengt | 1e-16 | ||
| 1viw_B | 205 | Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Le | 2e-16 | ||
| 1avb_A | 226 | Arcelin-1 From Phaseolus Vulgaris L Length = 226 | 2e-15 | ||
| 2jdz_A | 239 | Crystal Structure Of Recombinant Dioclea Guianensis | 1e-14 | ||
| 2je7_A | 239 | Crystal Structure Of Recombinant Dioclea Guianensis | 1e-14 | ||
| 1mvq_A | 236 | Cratylia Mollis Lectin (Isoform 1) In Complex With | 2e-14 | ||
| 2d3p_A | 236 | Cratylia Floribunda Seed Lectin Crystallized At Bas | 2e-14 | ||
| 1h9w_A | 237 | Native Dioclea Guianensis Seed Lectin Length = 237 | 3e-14 | ||
| 2jec_A | 239 | Crystal Structure Of Recombinant Dioclea Grandiflor | 4e-14 | ||
| 2zbj_A | 237 | Crystal Structure Of Dioclea Rostrata Lectin Length | 4e-14 | ||
| 2je9_A | 239 | Crystal Structure Of Recombinant Dioclea Grandiflor | 4e-14 | ||
| 1h9p_A | 237 | Crystal Structure Of Dioclea Guianensis Seed Lectin | 4e-14 | ||
| 2gdf_A | 237 | Crystal Structure Of Dioclea Violacea Seed Lectin L | 4e-14 | ||
| 3sh3_A | 237 | Crystal Structure Of A Pro-Inflammatory Lectin From | 5e-14 | ||
| 3u4x_A | 236 | Crystal Structure Of A Lectin From Camptosema Pedic | 5e-14 | ||
| 3rrd_A | 237 | Native Structure Of Dioclea Virgata Lectin Length = | 5e-14 | ||
| 3a0k_A | 237 | Crystal Structure Of An Antiflamatory Legume Lectin | 6e-14 | ||
| 1cn1_A | 237 | Crystal Structure Of Demetallized Concanavalin A. T | 7e-14 | ||
| 2cna_A | 237 | The Covalent And Three-Dimensional Structure Of Con | 7e-14 | ||
| 1dgl_A | 237 | Lectin From Dioclea Grandiflora Complexed To Triman | 2e-13 | ||
| 2ctv_A | 237 | High Resolution Crystallographic Studies Of Native | 1e-12 | ||
| 2yz4_A | 237 | The Neutron Structure Of Concanavalin A At 2.2 Angs | 1e-12 | ||
| 2cwm_A | 237 | Native Crystal Structure Of No Releasing Inductive | 2e-12 | ||
| 1azd_A | 237 | Concanavalin From Canavalia Brasiliensis Length = 2 | 2e-12 | ||
| 2ow4_A | 237 | Crystal Structure Of A Lectin From Canavalia Mariti | 2e-12 | ||
| 1wuv_A | 237 | Crystal Structure Of Native Canavalia Gladiata Lect | 4e-12 | ||
| 2ovu_A | 237 | Crystal Strucure Of A Lectin From Canavalia Gladiat | 5e-12 | ||
| 1ioa_A | 240 | Arcelin-5, A Lectin-Like Defense Protein From Phase | 7e-12 | ||
| 1qmo_A | 113 | Structure Of Fril, A Legume Lectin That Delays Hema | 2e-06 | ||
| 1les_B | 52 | Lentil Lectin Complexed With Sucrose Length = 52 | 7e-04 |
| >pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281 | Back alignment and structure |
|
| >pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234 | Back alignment and structure |
| >pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242 | Back alignment and structure |
| >pdb|2PEL|A Chain A, Peanut Lectin Length = 236 | Back alignment and structure |
| >pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232 | Back alignment and structure |
| >pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237 | Back alignment and structure |
| >pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253 | Back alignment and structure |
| >pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256 | Back alignment and structure |
| >pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242 | Back alignment and structure |
| >pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252 | Back alignment and structure |
| >pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252 | Back alignment and structure |
| >pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251 | Back alignment and structure |
| >pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252 | Back alignment and structure |
| >pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261 | Back alignment and structure |
| >pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233 | Back alignment and structure |
| >pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239 | Back alignment and structure |
| >pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239 | Back alignment and structure |
| >pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234 | Back alignment and structure |
| >pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240 | Back alignment and structure |
| >pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I Length = 242 | Back alignment and structure |
| >pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253 | Back alignment and structure |
| >pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia)) Complex With Y Human Blood Group Determinant Length = 243 | Back alignment and structure |
| >pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257 | Back alignment and structure |
| >pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257 | Back alignment and structure |
| >pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181 | Back alignment and structure |
| >pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253 | Back alignment and structure |
| >pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237 | Back alignment and structure |
| >pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241 | Back alignment and structure |
| >pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242 | Back alignment and structure |
| >pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187 | Back alignment and structure |
| >pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181 | Back alignment and structure |
| >pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180 | Back alignment and structure |
| >pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233 | Back alignment and structure |
| >pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181 | Back alignment and structure |
| >pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181 | Back alignment and structure |
| >pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239 | Back alignment and structure |
| >pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238 | Back alignment and structure |
| >pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 | Back alignment and structure |
| >pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255 | Back alignment and structure |
| >pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239 | Back alignment and structure |
| >pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 | Back alignment and structure |
| >pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242 | Back alignment and structure |
| >pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242 | Back alignment and structure |
| >pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239 | Back alignment and structure |
| >pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239 | Back alignment and structure |
| >pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182 | Back alignment and structure |
| >pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 133 | Back alignment and structure |
| >pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase Length = 223 | Back alignment and structure |
| >pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Length = 205 | Back alignment and structure |
| >pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226 | Back alignment and structure |
| >pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 | Back alignment and structure |
| >pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin S131h Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 | Back alignment and structure |
| >pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With Methyl-Alpha-D- Mannose Length = 236 | Back alignment and structure |
| >pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph Length = 236 | Back alignment and structure |
| >pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin Length = 237 | Back alignment and structure |
| >pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Mutant E123a-H131n-K132q Complexed With 5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose Length = 239 | Back alignment and structure |
| >pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin Length = 237 | Back alignment and structure |
| >pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 | Back alignment and structure |
| >pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin Length = 237 | Back alignment and structure |
| >pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin Length = 237 | Back alignment and structure |
| >pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The Seeds Of Dioclea Wilsonii Standl Length = 237 | Back alignment and structure |
| >pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum Seeds In Complex With 5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose Length = 236 | Back alignment and structure |
| >pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin Length = 237 | Back alignment and structure |
| >pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From Cymbosema Roseum Seeds Length = 237 | Back alignment and structure |
| >pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The Metal- Binding Region Length = 237 | Back alignment and structure |
| >pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of Concanavalin A, Iv.Atomic Coordinates,Hydrogen Bonding,And Quaternary Structure Length = 237 | Back alignment and structure |
| >pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside Length = 237 | Back alignment and structure |
| >pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native Concanavalin A Using Rapid Laue Data Collection Methods And The Introduction Of A Monochromatic Large-Angle Oscillation Technique (Lot) Length = 237 | Back alignment and structure |
| >pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms Length = 237 | Back alignment and structure |
| >pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin From Seeds Of The Canavalia Maritima (Conm) Length = 237 | Back alignment and structure |
| >pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis Length = 237 | Back alignment and structure |
| >pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima Seeds (Conm) In Complex With Man1-2man-Ome Length = 237 | Back alignment and structure |
| >pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin (Cgl): A Tetrameric Cona-Like Lectin Length = 237 | Back alignment and structure |
| >pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl) In Complex With Man1-2man-Ome Length = 237 | Back alignment and structure |
| >pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus Vulgaris Length = 240 | Back alignment and structure |
| >pdb|1QMO|A Chain A, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 113 | Back alignment and structure |
| >pdb|1LES|B Chain B, Lentil Lectin Complexed With Sucrose Length = 52 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 299 | |||
| 1fx5_A | 242 | UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO | 1e-55 | |
| 1v6i_A | 232 | Agglutinin, PNA, galactose-binding lectin; open qu | 2e-55 | |
| 2bqp_A | 234 | Protein (PEA lectin); D-glucopyranose complex, sug | 3e-55 | |
| 1dbn_A | 239 | MAL, protein (leukoagglutinin); plant lectin, carb | 7e-55 | |
| 3zyr_A | 261 | Lectin; sugar binding protein, N-glycan; HET: NAG | 2e-53 | |
| 1g7y_A | 253 | Stem/LEAF lectin DB58; jelly roll fold, sugar bind | 2e-52 | |
| 2eig_A | 234 | Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin | 4e-52 | |
| 2fmd_A | 240 | Lectin, agglutinin, BMA; legume lectin, beta sandw | 7e-52 | |
| 3ipv_A | 251 | Lectin alpha chain; galactose binding, SEED lectin | 7e-52 | |
| 1gsl_A | 243 | Griffonia simplicifolia lectin 4; glycoprotein, ma | 3e-51 | |
| 1fny_A | 237 | BARK lectin, BARK agglutinin I,polypeptide A; legu | 3e-51 | |
| 1hql_A | 257 | Lectin; xenograft antigen, sugar BI protein; HET: | 1e-50 | |
| 1fat_A | 252 | Phytohemagglutinin-L; glycoprotein, plant defense | 3e-50 | |
| 1sbf_A | 253 | Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G | 4e-50 | |
| 1qnw_A | 242 | Chitin binding lectin, UEA-II; carbohydrate bindin | 1e-49 | |
| 1gzc_A | 239 | Erythrina crista-galli lectin; carbohydrate, sugar | 1e-48 | |
| 1avb_A | 226 | Arcelin-1; lectin-like glycoprotein, plant defense | 7e-48 | |
| 1n47_A | 233 | Isolectin B4; cancer antigen, vicia villosa lectin | 2e-47 | |
| 1wbf_A | 242 | Protein (agglutinin); lectin (agglutinin), legume | 2e-46 | |
| 1f9k_A | 238 | Acidic lectin; legume lectin, glycosylated protein | 8e-46 | |
| 2ltn_A | 181 | PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO | 1e-45 | |
| 1ioa_A | 240 | Arcelin-5A, ARC5A; lectin-like proteins, plant def | 6e-45 | |
| 1dhk_B | 223 | Bean lectin-like inhibitor, porcine pancreatic alp | 5e-40 | |
| 1qmo_E | 133 | Mannose binding lectin, FRIL; crosslink, hematopoi | 1e-30 | |
| 1qmo_A | 113 | Mannose binding lectin, FRIL; crosslink, hematopoi | 1e-26 | |
| 1nls_A | 237 | Concanavalin A; lectin, agglutinin; 0.94A {Canaval | 2e-26 | |
| 1nls_A | 237 | Concanavalin A; lectin, agglutinin; 0.94A {Canaval | 4e-16 | |
| 1gv9_A | 260 | P58/ergic-53; lectin, carbohydrate binding; 1.46A | 5e-19 | |
| 2dur_A | 253 | VIP36;, vesicular integral-membrane protein VIP36; | 2e-14 | |
| 2ltn_B | 52 | PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP | 7e-14 |
| >1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 1e-55
Identities = 88/245 (35%), Positives = 131/245 (53%), Gaps = 15/245 (6%)
Query: 17 ANSVSFRMSSFDSNRKDIIYQGDA-VPSVGAIEL--IKNYQYLCRVGWATYADRVPLWNS 73
++ +SF+ +F N KD+ +QG+A V G ++L + N G A Y + +WN
Sbjct: 1 SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60
Query: 74 DTGELADFSTKFSFQINT-LDRSTYGHGLVFFLAPVGFQIPPNADGGFLGLFNTTTSFSS 132
+TGELA F T FSF + T + GL FFLAP P GG+ GLFN T S
Sbjct: 61 NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDS--PLRRAGGYFGLFNDTKC-DS 117
Query: 133 SNHIVHVEFDTFFNS--EWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYN 190
S V VEFDT + WDP H+GI+ N + S RWN + + A+V I Y
Sbjct: 118 SYQTVAVEFDTIGSPVNFWDPGF--PHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYE 175
Query: 191 STTKNLSVSWTYRQTSDPRENTSLFYIIDLMKVLPQWVTIGFSAATGLS-GERHILESWE 249
+++K L+ S TY + + S+ I+DL ++LP+WV++GFS +T + H + +W
Sbjct: 176 ASSKTLTASLTY---PSDQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWY 232
Query: 250 FSSSL 254
F+S+
Sbjct: 233 FTSTF 237
|
| >1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232 | Back alignment and structure |
|---|
| >2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234 | Back alignment and structure |
|---|
| >1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239 | Back alignment and structure |
|---|
| >3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261 | Back alignment and structure |
|---|
| >1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253 | Back alignment and structure |
|---|
| >2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234 | Back alignment and structure |
|---|
| >2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240 | Back alignment and structure |
|---|
| >3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251 | Back alignment and structure |
|---|
| >1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243 | Back alignment and structure |
|---|
| >1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237 | Back alignment and structure |
|---|
| >1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257 | Back alignment and structure |
|---|
| >1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252 | Back alignment and structure |
|---|
| >1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253 | Back alignment and structure |
|---|
| >1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242 | Back alignment and structure |
|---|
| >1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239 | Back alignment and structure |
|---|
| >1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226 | Back alignment and structure |
|---|
| >1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233 | Back alignment and structure |
|---|
| >1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242 | Back alignment and structure |
|---|
| >1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238 | Back alignment and structure |
|---|
| >2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181 | Back alignment and structure |
|---|
| >1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240 | Back alignment and structure |
|---|
| >1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223 | Back alignment and structure |
|---|
| >1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133 | Back alignment and structure |
|---|
| >1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113 | Back alignment and structure |
|---|
| >1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 | Back alignment and structure |
|---|
| >1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 | Back alignment and structure |
|---|
| >1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260 | Back alignment and structure |
|---|
| >2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253 | Back alignment and structure |
|---|
| >2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| 3ujo_A | 281 | Legume lectin; carbohydrate-binding, galactose, ad | 100.0 | |
| 3zyr_A | 261 | Lectin; sugar binding protein, N-glycan; HET: NAG | 100.0 | |
| 1dbn_A | 239 | MAL, protein (leukoagglutinin); plant lectin, carb | 100.0 | |
| 3ipv_A | 251 | Lectin alpha chain; galactose binding, SEED lectin | 100.0 | |
| 1fny_A | 237 | BARK lectin, BARK agglutinin I,polypeptide A; legu | 100.0 | |
| 2bqp_A | 234 | Protein (PEA lectin); D-glucopyranose complex, sug | 100.0 | |
| 1qnw_A | 242 | Chitin binding lectin, UEA-II; carbohydrate bindin | 100.0 | |
| 1v6i_A | 232 | Agglutinin, PNA, galactose-binding lectin; open qu | 100.0 | |
| 2eig_A | 234 | Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin | 100.0 | |
| 1fx5_A | 242 | UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO | 100.0 | |
| 1g7y_A | 253 | Stem/LEAF lectin DB58; jelly roll fold, sugar bind | 100.0 | |
| 1sbf_A | 253 | Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G | 100.0 | |
| 2fmd_A | 240 | Lectin, agglutinin, BMA; legume lectin, beta sandw | 100.0 | |
| 1gzc_A | 239 | Erythrina crista-galli lectin; carbohydrate, sugar | 100.0 | |
| 1n47_A | 233 | Isolectin B4; cancer antigen, vicia villosa lectin | 100.0 | |
| 1hql_A | 257 | Lectin; xenograft antigen, sugar BI protein; HET: | 100.0 | |
| 1fat_A | 252 | Phytohemagglutinin-L; glycoprotein, plant defense | 100.0 | |
| 1f9k_A | 238 | Acidic lectin; legume lectin, glycosylated protein | 100.0 | |
| 1gsl_A | 243 | Griffonia simplicifolia lectin 4; glycoprotein, ma | 100.0 | |
| 1wbf_A | 242 | Protein (agglutinin); lectin (agglutinin), legume | 100.0 | |
| 1avb_A | 226 | Arcelin-1; lectin-like glycoprotein, plant defense | 100.0 | |
| 1ioa_A | 240 | Arcelin-5A, ARC5A; lectin-like proteins, plant def | 100.0 | |
| 1dhk_B | 223 | Bean lectin-like inhibitor, porcine pancreatic alp | 100.0 | |
| 2ltn_A | 181 | PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO | 100.0 | |
| 1gv9_A | 260 | P58/ergic-53; lectin, carbohydrate binding; 1.46A | 100.0 | |
| 2dur_A | 253 | VIP36;, vesicular integral-membrane protein VIP36; | 100.0 | |
| 1qmo_E | 133 | Mannose binding lectin, FRIL; crosslink, hematopoi | 100.0 | |
| 1nls_A | 237 | Concanavalin A; lectin, agglutinin; 0.94A {Canaval | 100.0 | |
| 2a6y_A | 256 | EMP47P (FORM1); beta sandwich, carbohydrate bindin | 99.97 | |
| 1qmo_A | 113 | Mannose binding lectin, FRIL; crosslink, hematopoi | 99.96 | |
| 1nls_A | 237 | Concanavalin A; lectin, agglutinin; 0.94A {Canaval | 99.92 | |
| 2a6z_A | 222 | EMP47P (FORM2); beta sandwich, carbohydrate bindin | 99.91 | |
| 2a6v_A | 226 | EMP46P; beta sandwich, carbohydrate binding protei | 99.79 | |
| 2ltn_B | 52 | PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP | 99.57 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 90.96 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 90.25 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 83.35 |
| >3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-66 Score=471.10 Aligned_cols=231 Identities=39% Similarity=0.708 Sum_probs=206.9
Q ss_pred CCCceeeEEeCCCCCCCCCeEEecceEeeCCeEEecCCCC----ccccEEEEEeCCCeeccCCCCCCceeeEEEEEEEEe
Q 046873 15 PSANSVSFRMSSFDSNRKDIIYQGDAVPSVGAIELIKNYQ----YLCRVGWATYADRVPLWNSDTGELADFSTKFSFQIN 90 (299)
Q Consensus 15 ~~a~~~~F~f~~F~~~~~~l~l~GdA~~~~g~l~LT~~~~----~~~~~Gr~~y~~Pi~l~~~~t~~~asFst~F~F~I~ 90 (299)
..+..++|+|++|. ..+|.++|+|.+.+|.||||++.. ..++.|||+|++||+|||+.+|+++||+|+|+|.|.
T Consensus 22 ~sa~~~sF~f~~F~--~~nL~l~GdA~i~~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsTsFsF~I~ 99 (281)
T 3ujo_A 22 ASANLISFTFKKFN--ETNLILQRDATVSSGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQ 99 (281)
T ss_dssp --CEEEEEEESSCC--STTEEECSSCCCBTTBEECSCCCSSCCCCSSCEEEEEESSCEECBCSSSCCBEEEEEEEEEECC
T ss_pred CcCCcceEEcCCCC--ccCEEEecceEEeCCEEEeCCCCCCCcccCCceEEEEECCCEEcccCCCCCceeEEEEEEEEEe
Confidence 34678999999998 469999999999999999999721 234899999999999999999999999999999999
Q ss_pred ecCCCCCccceEEEEcccCCCCCCCCCCCccccccCCCCCCCCccEEEEEEecccCCCCCCCCCCCceEEecCCCcceee
Q 046873 91 TLDRSTYGHGLVFFLAPVGFQIPPNADGGFLGLFNTTTSFSSSNHIVHVEFDTFFNSEWDPSGVQDHVGINNNSIASAVH 170 (299)
Q Consensus 91 ~~~~~~~gDGlAF~l~p~~~~~p~~~~G~~LGl~~~~~~~~~~~~~vAVEFDT~~n~~~Dp~~~~~HVgIdins~~S~~~ 170 (299)
+++...+||||||+|+|.+.. | +..||||||+|.+++ +..+|.|||||||++|.+|||++ ||||||||++.|..+
T Consensus 100 ~~~~~~~gdGlAF~laP~~~~-p-~~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~N~e~Dp~~--nHVGIDvNSi~S~~t 174 (281)
T 3ujo_A 100 APNAASPADGLAFALVPVGSQ-P-KDKGGFLGLFDSKNY-ASSNQTVAVEFDTFYNGGWDPTE--RHIGIDVNSIKSIKT 174 (281)
T ss_dssp CSSTTSCCEEEEEEEEETTCC-C-CCCGGGTTTCSCSSC-CTTSCCEEEEECCSCCCSSCCSS--SEEEEEESSSCCSCE
T ss_pred cCCCCCCCCceEEEEecCCCC-C-CCCcceeeeccccCC-CccCcEEEEEEeccccccCCCCC--CeEEEEcCCCCcccc
Confidence 877778999999999998743 4 478999999987665 67899999999999997799999 999999999999999
Q ss_pred eecccccCCCCeeEEEEEEeCCCCeEEEEEeecCCCCCCCcceEEEeeccccccCceeEEEEEeecCC---ccccEEEEE
Q 046873 171 TRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLMKVLPQWVTIGFSAATGL---SGERHILES 247 (299)
Q Consensus 171 ~~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~~~~ls~~vdL~~~l~~~v~vGFSAsTG~---~~~~h~Ils 247 (299)
++|+ +.+|+.++|||+||+.+++|+|+|.+.+. +..|++++.+||+++|||+||||||||||. ..|.|+|++
T Consensus 175 ~~~~--l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~---~~~~~lS~~vDL~~~L~e~v~VGFSAsTG~~~~~~e~H~Ils 249 (281)
T 3ujo_A 175 TSWD--FANGENAEVLITYDSSTNLLVASLVHPSQ---KTSFIVSERVDLTSVLPEWVSVGFSATTGLSKGYVETNEVLS 249 (281)
T ss_dssp EECC--CCSSCCEEEEEEECTTTCEEEEEEECTTT---CCCEEEEEECCSTTTSCSEEEEEEEEEECSSTTSCCCCEEEE
T ss_pred cccc--ccCCCEEEEEEEEeCCCCEEEEEEecCCC---CCCceEEEEechHHhccCcEEEEEEeecCCCCcccceeEEEE
Confidence 9885 67999999999999999999999998653 457899999999999999999999999996 689999999
Q ss_pred EEEEeccCCc
Q 046873 248 WEFSSSLDMK 257 (299)
Q Consensus 248 WsF~s~~~~~ 257 (299)
|+|+++++..
T Consensus 250 WSFss~l~~~ 259 (281)
T 3ujo_A 250 WSFASKLSIN 259 (281)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEcCCC
Confidence 9999998754
|
| >3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... | Back alignment and structure |
|---|
| >1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 | Back alignment and structure |
|---|
| >3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* | Back alignment and structure |
|---|
| >1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* | Back alignment and structure |
|---|
| >2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 | Back alignment and structure |
|---|
| >1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* | Back alignment and structure |
|---|
| >1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... | Back alignment and structure |
|---|
| >2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} | Back alignment and structure |
|---|
| >1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* | Back alignment and structure |
|---|
| >1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* | Back alignment and structure |
|---|
| >1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* | Back alignment and structure |
|---|
| >2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} | Back alignment and structure |
|---|
| >1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* | Back alignment and structure |
|---|
| >1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 | Back alignment and structure |
|---|
| >1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* | Back alignment and structure |
|---|
| >1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* | Back alignment and structure |
|---|
| >1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* | Back alignment and structure |
|---|
| >1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* | Back alignment and structure |
|---|
| >1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* | Back alignment and structure |
|---|
| >1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 | Back alignment and structure |
|---|
| >1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 | Back alignment and structure |
|---|
| >1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* | Back alignment and structure |
|---|
| >2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* | Back alignment and structure |
|---|
| >1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A | Back alignment and structure |
|---|
| >2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* | Back alignment and structure |
|---|
| >1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 | Back alignment and structure |
|---|
| >1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... | Back alignment and structure |
|---|
| >2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 | Back alignment and structure |
|---|
| >1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 | Back alignment and structure |
|---|
| >1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... | Back alignment and structure |
|---|
| >2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A | Back alignment and structure |
|---|
| >2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A | Back alignment and structure |
|---|
| >2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B | Back alignment and structure |
|---|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 299 | ||||
| d1fx5a_ | 240 | b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus | 4e-57 | |
| d1qnwa_ | 237 | b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus | 2e-56 | |
| d1hqla_ | 236 | b.29.1.1 (A:) Legume lectin {Griffonia simplicifol | 6e-56 | |
| g2ltn.1 | 229 | b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum | 2e-55 | |
| d1dbna_ | 239 | b.29.1.1 (A:) Legume lectin {Maackia amurensis, le | 2e-54 | |
| d1v6ia_ | 232 | b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog | 2e-54 | |
| d1g7ya_ | 253 | b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos | 4e-54 | |
| d1leda_ | 243 | b.29.1.1 (A:) Legume lectin {West-central african | 4e-54 | |
| d1ukga_ | 241 | b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero | 9e-54 | |
| d1g8wa_ | 233 | b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar | 1e-53 | |
| d1fnya_ | 237 | b.29.1.1 (A:) Legume lectin {Black locust (Robinia | 2e-53 | |
| g1qmo.1 | 230 | b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich | 1e-52 | |
| d1gzca_ | 239 | b.29.1.1 (A:) Legume lectin {Cockspur coral tree ( | 3e-52 | |
| d2d3sa1 | 237 | b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso | 3e-51 | |
| d1g9fa_ | 251 | b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) | 4e-51 | |
| d1avba_ | 226 | b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar | 3e-50 | |
| d1n47a_ | 233 | b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi | 2e-49 | |
| d1f9ka_ | 234 | b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca | 7e-49 | |
| d1ioaa_ | 228 | b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar | 3e-46 | |
| d1dhkb_ | 204 | b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar | 3e-37 | |
| d1nlsa_ | 237 | b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia | 4e-33 | |
| d1nlsa_ | 237 | b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia | 1e-23 | |
| d1gv9a_ | 228 | b.29.1.13 (A:) Carbohydrate-recognition domain of | 6e-26 | |
| d2a6za1 | 221 | b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake | 8e-09 | |
| d2a6va1 | 218 | b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake | 1e-07 |
| >d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Legume lectins domain: Legume lectin species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]
Score = 181 bits (461), Expect = 4e-57
Identities = 86/243 (35%), Positives = 128/243 (52%), Gaps = 11/243 (4%)
Query: 17 ANSVSFRMSSFDSNRKDIIYQGDA-VPSVGAIELIKNYQYL--CRVGWATYADRVPLWNS 73
++ +SF+ +F N KD+ +QG+A V G ++L K L G A Y + +WN
Sbjct: 1 SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60
Query: 74 DTGELADFSTKFSFQINT-LDRSTYGHGLVFFLAPVGFQIPPNADGGFLGLFNTTTSFSS 132
+TGELA F T FSF + T + GL FFLAP P GG+ GLFN T S
Sbjct: 61 NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDS--PLRRAGGYFGLFNDTKC-DS 117
Query: 133 SNHIVHVEFDTFFNSEWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNST 192
S V VEFDT + H+GI+ N + S RWN + + A+V I Y ++
Sbjct: 118 SYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYEAS 177
Query: 193 TKNLSVSWTYRQTSDPRENTSLFYIIDLMKVLPQWVTIGFSAATGLS-GERHILESWEFS 251
+K L+ S TY + + S+ I+DL ++LP+WV++GFS +T + H + +W F+
Sbjct: 178 SKTLTASLTY---PSDQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFT 234
Query: 252 SSL 254
S+
Sbjct: 235 STF 237
|
| >d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237 | Back information, alignment and structure |
|---|
| >d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236 | Back information, alignment and structure |
|---|
| >d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239 | Back information, alignment and structure |
|---|
| >d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232 | Back information, alignment and structure |
|---|
| >d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253 | Back information, alignment and structure |
|---|
| >d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243 | Back information, alignment and structure |
|---|
| >d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241 | Back information, alignment and structure |
|---|
| >d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233 | Back information, alignment and structure |
|---|
| >d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237 | Back information, alignment and structure |
|---|
| >d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239 | Back information, alignment and structure |
|---|
| >d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237 | Back information, alignment and structure |
|---|
| >d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251 | Back information, alignment and structure |
|---|
| >d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226 | Back information, alignment and structure |
|---|
| >d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233 | Back information, alignment and structure |
|---|
| >d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234 | Back information, alignment and structure |
|---|
| >d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228 | Back information, alignment and structure |
|---|
| >d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204 | Back information, alignment and structure |
|---|
| >d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 | Back information, alignment and structure |
|---|
| >d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 | Back information, alignment and structure |
|---|
| >d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228 | Back information, alignment and structure |
|---|
| >d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 | Back information, alignment and structure |
|---|
| >d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| d1hqla_ | 236 | Legume lectin {Griffonia simplicifolia, lectin I-b | 100.0 | |
| d1leda_ | 243 | Legume lectin {West-central african legume (Griffo | 100.0 | |
| d1fx5a_ | 240 | Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI | 100.0 | |
| d1qnwa_ | 237 | Legume lectin {Furze (Ulex europaeus), UEA-II [Tax | 100.0 | |
| d2d3sa1 | 237 | Legume lectin {Winged bean (Psophocarpus tetragono | 100.0 | |
| d1gzca_ | 239 | Legume lectin {Cockspur coral tree (Erythrina cris | 100.0 | |
| d1g9fa_ | 251 | Legume lectin {Soybean (Glycine max) [TaxId: 3847] | 100.0 | |
| d1dbna_ | 239 | Legume lectin {Maackia amurensis, leukoagglutinin | 100.0 | |
| d1g7ya_ | 253 | Legume lectin {Horse gram (Dolichos biflorus), dif | 100.0 | |
| d1f9ka_ | 234 | Legume lectin {Winged bean (Psophocarpus tetragono | 100.0 | |
| g1qmo.1 | 230 | Legume lectin {Field bean (Dolichos lablab), Fril | 100.0 | |
| d1v6ia_ | 232 | Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3 | 100.0 | |
| d1g8wa_ | 233 | Phytohemagglutinin-L, PHA-L, also arcelin {Kidney | 100.0 | |
| d1fnya_ | 237 | Legume lectin {Black locust (Robinia pseudoacacia) | 100.0 | |
| g2ltn.1 | 229 | Legume lectin {Garden pea (Pisum sativum) [TaxId: | 100.0 | |
| d1n47a_ | 233 | Legume lectin {Hairy vetch (Vicia villosa), isolec | 100.0 | |
| d1ukga_ | 241 | Legume lectin {Bloodwood tree (Pterocarpus angolen | 100.0 | |
| d1avba_ | 226 | Phytohemagglutinin-L, PHA-L, also arcelin {Kidney | 100.0 | |
| d1ioaa_ | 228 | Phytohemagglutinin-L, PHA-L, also arcelin {Kidney | 100.0 | |
| d1dhkb_ | 204 | Phytohemagglutinin-L, PHA-L, also arcelin {Kidney | 100.0 | |
| d1gv9a_ | 228 | Carbohydrate-recognition domain of P58/ERGIC-53 {R | 100.0 | |
| d1nlsa_ | 237 | Concanavalin A {Jack bean (Canavalia ensiformis) [ | 100.0 | |
| d2a6za1 | 221 | Emp47p N-terminal domain {Baker's yeast (Saccharom | 99.94 | |
| d2a6va1 | 218 | Emp46p N-terminal domain {Baker's yeast (Saccharom | 99.94 | |
| d1nlsa_ | 237 | Concanavalin A {Jack bean (Canavalia ensiformis) [ | 99.93 |
| >d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Legume lectins domain: Legume lectin species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]
Probab=100.00 E-value=3e-60 Score=425.03 Aligned_cols=227 Identities=38% Similarity=0.604 Sum_probs=200.9
Q ss_pred eeeEEeCCCCCC-CCCeEEecceEeeCCeEEecCCC----CccccEEEEEeCCCeeccCCCCCCceeeEEEEEEEEeecC
Q 046873 19 SVSFRMSSFDSN-RKDIIYQGDAVPSVGAIELIKNY----QYLCRVGWATYADRVPLWNSDTGELADFSTKFSFQINTLD 93 (299)
Q Consensus 19 ~~~F~f~~F~~~-~~~l~l~GdA~~~~g~l~LT~~~----~~~~~~Gr~~y~~Pi~l~~~~t~~~asFst~F~F~I~~~~ 93 (299)
+++|+|++|++. ..+|.|+|+|.+.++.|+||++. +.+.++|||+|++||+||+..+++++||+|+|+|+|...
T Consensus 1 ~~sF~f~~F~~~~~~~l~l~G~A~~~~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~~~asFsT~F~F~i~~~- 79 (236)
T d1hqla_ 1 SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKIT- 79 (236)
T ss_dssp CCEEEESCSCSCGGGTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEEC-
T ss_pred CEEEEeCCCCCCCcCCEEEeccEEecCCEEEEecCCCCCcccccceEEEEECCCEEeecCCCCceeEEEEEEEEEEeCC-
Confidence 479999999864 46799999999999999999852 245689999999999999999999999999999999874
Q ss_pred CCCCccceEEEEcccCCCCCCCCCCCccccccCCCC-CCCCccEEEEEEecccCCC-CCCCCCCCceEEecCCCcceeee
Q 046873 94 RSTYGHGLVFFLAPVGFQIPPNADGGFLGLFNTTTS-FSSSNHIVHVEFDTFFNSE-WDPSGVQDHVGINNNSIASAVHT 171 (299)
Q Consensus 94 ~~~~gDGlAF~l~p~~~~~p~~~~G~~LGl~~~~~~-~~~~~~~vAVEFDT~~n~~-~Dp~~~~~HVgIdins~~S~~~~ 171 (299)
...+||||||+|+|.+. +.+..|++||+++..++ +...++.|||||||++|.+ +||++ +|||||+|++.|..+.
T Consensus 80 ~~~~gDGlAFvl~p~~~--~~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~--nHIgIdvns~~s~~~~ 155 (236)
T d1hqla_ 80 GNGPADGLAFFLAPPDS--DVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSY--RHIGINVNSIVSVATK 155 (236)
T ss_dssp SSCCCCEEEEEEECTTC--CCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSS--CEEEEEESSSSCSEEE
T ss_pred CCCCCceEEEEEeCCCC--CCCCCccccccccccccCCcccCceEEEEeeCccCCCCCCCCC--CEEEEEcCCccccccc
Confidence 45689999999999763 44678999999987554 3457899999999999987 89999 9999999999998888
Q ss_pred ecc-cccCCCCeeEEEEEEeCCCCeEEEEEeecCCCCCCCcceEEEeeccccccCceeEEEEEeecCCc-cccEEEEEEE
Q 046873 172 RWN-ASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLMKVLPQWVTIGFSAATGLS-GERHILESWE 249 (299)
Q Consensus 172 ~~~-~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~~~~ls~~vdL~~~l~~~v~vGFSAsTG~~-~~~h~IlsWs 249 (299)
++. .++++|+.++|||+||+.+++|+|+|++. ++..|+|++.+||+++|+++||||||||||.. .+.|+|++|+
T Consensus 156 ~~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~----~~~~~~ls~~vdL~~~l~~~v~vGFSasTG~~~~~~h~I~sWs 231 (236)
T d1hqla_ 156 RWEDSDIFSGKIATARISYDGSAEILTVVLSYP----DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWR 231 (236)
T ss_dssp ECCHHHHTSCSCEEEEEEEETTTTEEEEEEEET----TTEEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEE
T ss_pred ccccccccCCCEEEEEEEEeCCCcEEEEEEecC----CCCCeeEEEEeCHHHhCCCcEEEEEEeECCCCCceEEEEEEeE
Confidence 775 57899999999999999999999999874 46789999999999999999999999999975 6789999999
Q ss_pred EEecc
Q 046873 250 FSSSL 254 (299)
Q Consensus 250 F~s~~ 254 (299)
|++++
T Consensus 232 F~s~l 236 (236)
T d1hqla_ 232 FSSNL 236 (236)
T ss_dssp EEEEC
T ss_pred eEecC
Confidence 99874
|
| >d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} | Back information, alignment and structure |
|---|
| >d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} | Back information, alignment and structure |
|---|
| >d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} | Back information, alignment and structure |
|---|
| >d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} | Back information, alignment and structure |
|---|
| >d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} | Back information, alignment and structure |
|---|
| >d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} | Back information, alignment and structure |
|---|
| >d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} | Back information, alignment and structure |
|---|
| >d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} | Back information, alignment and structure |
|---|
| >d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} | Back information, alignment and structure |
|---|
| >d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
| >d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} | Back information, alignment and structure |
|---|
| >d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} | Back information, alignment and structure |
|---|
| >d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} | Back information, alignment and structure |
|---|
| >d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
| >d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} | Back information, alignment and structure |
|---|
| >d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
| >d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} | Back information, alignment and structure |
|---|
| >d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} | Back information, alignment and structure |
|---|