Citrus Sinensis ID: 047018

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MASAYFTMLLICFRLSITTVLAHPKQIPLDASKLEAWIGENMREFTERKAQLAQGKNDTVVDHVLAAAEDGFRVITVRKDGRGDFKTVTDAVKSIPSGNTRRVVVKIGGGEYWEKITVERSKDFVTFFGDPFDMPKIVFNGTALHFGTVNSATVAVESDYFVAANVAFVNSAPMPDGKRLGAQAVAMRISGDKAAFHNCKFIGYQDTLCDDKGRHFFKDCYIQGTVDFIFGNGKSLYLRTTIVSVANGLGVITAQAREQVNDDSGFTFVHCNITGSGDTYLGRAWKERPRVLFAYTYMGTLINSQGWAAGEHSQSHKTVYYGEYKCMGPGASSSGRVKFAKLLSEAEAKPFLSMTYLNGNKWLLPLPNL
ccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHcccccEEEEccccccccccHHHHHHHcccccccEEEEEEEcEEEEEEEEEccccccEEEEEccccccEEEEccccccccccccEEEEEEcccEEEEccEEECcccccccccccccEEEEEEEccCEEEEEEEEECccccEEcccccEEEEccEEEEEccEEEcccEEEEEccEEEEEccccEEEEEccccccccccEEEEEccEEEEccccccccccccccEEEEEccccccccccccccccccccccccCEEEEEccccccccccccccccccccHHHHcccccccEEcccccccccccc
****YFTMLLICFRLSITTVL************LEAWIGENMR*****************VDHVLAAAEDGFRVITVRKDGRGDFKTVTDAVKSIPSGNTRRVVVKIGGGEYWEKITVERSKDFVTFFGDPFDMPKIVFNGTALHFGTVNSATVAVESDYFVAANVAFVNSAPMPDGKRLGAQAVAMRISGDKAAFHNCKFIGYQDTLCDDKGRHFFKDCYIQGTVDFIFGNGKSLYLRTTIVSVANGLGVITAQAREQVNDDSGFTFVHCNITGSGDTYLGRAWKERPRVLFAYTYMGTLINSQGWAAGEHSQSHKTVYYGEYKCMGPGASSSGRVKFAKLLSEAEAKPFLSMTYLNGNKWLLPLP**
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SSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASAYFTMLLICFRLSITTVLAHPKQIPLDASKLEAWIGENMREFTERKAQLAQGKNDTVVDHVLAAAEDGFRVITVRKDGRGDFKTVTDAVKSIPSGNTRRVVVKIGGGEYWEKITVERSKDFVTFFGDPFDMPKIVFNGTALHFGTVNSATVAVESDYFVAANVAFVNSAPMPDGKRLGAQAVAMRISGDKAAFHNCKFIGYQDTLCDDKGRHFFKDCYIQGTVDFIFGNGKSLYLRTTIVSVANGLGVITAQAREQVNDDSGFTFVHCNITGSGDTYLGRAWKERPRVLFAYTYMGTLINSQGWAAGEHSQSHKTVYYGEYKCMGPGASSSGRVKFAKLLSEAEAKPFLSMTYLNGNKWLLPLPNL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable pectinesterase 48 Acts in the modification of cell walls via demethylesterification of cell wall pectin.probableQ9LY19
Pectinesterase PPME1 Acts in the modification of cell walls via demethylesterification of cell wall pectin. Involved in the pollen tube growth and determination of pollen tube morphology.probableQ84WM7

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.11Pectinesterase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GQ8, chain A
Confidence level:very confident
Coverage over the Query: 71-366
View the alignment between query and template
View the model in PyMOL