Citrus Sinensis ID: 047036

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630----
MGTSQSREDYISDSDYEESESGESSQYDDAQETSSSSSQSGTKTLNSLDEVDAKLKSLKLKYSTPQSPNVKNPVKLYLHIGGNTPKAKWVISDKLTSYSFVRTNKINGGNDSDDDEEESEKGVLGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQDRLFENVYGLKATEENKMKVYGKEFIGWVKPEVADDSMWEDADDGLDKTPESVTPVRGNRDLLEEFEELANGGVQSLTLGALDNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVTDSPEAPLVVATPMKVSSISLSGRR
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccEEEEEccccccccEEEECcccCEEEEEECcccccccccccccccccccccccCEEEEEEccEEEcccccccccECcccccCEEEEEccEEEEEEccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHccccccEEEEcccccEEEEcccCEEEEEcccccccccccEEEEccccccccccccccccccccccccEEEEcccccccccccccEEEEcccccEEEEEEEccccccccEEECccccccccccccccEEEEECccccEEECcccccccEEEEEccccccccccccccccccccEEEEEEccccEEEEEcccccEEEEccccccccccccccccccEEEEEEcccccEEEEEcccEEEEEEEEECcccccccccccccccccccccCEEEEcccHHHHccccccccCEEEEEEcccccEEEEEEEEEccEEEEEEHHHHHccccccHHcccccccCEEEEEEEcccEEEEccCCcccccccccccccEEEEcccccccccccccc
************************************************************************PVKLYLHIGGNTPKAKWVISDKLTSYSFVRTNKINGG*************VLGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQDRLFENVYGLKATEENKMKVYGKEFIGWVKPEVA***********************************ANGGVQSLTLGALDNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKTKT*********IPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVTDSPEAPLVVATPMKVSSI******
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGTSQSREDYISDSDYEESESGESSQYDDAQETSSSSSQSGTKTLNSLDEVDAKLKSLKLKYSTPQSPNVKNPVKLYLHIGGNTPKAKWVISDKLTSYSFVRTNKINGGNDSDDDEEESEKGVLGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQDRLFENVYGLKATEENKMKVYGKEFIGWVKPEVADDSMWEDADDGLDKTPESVTPVRGNRDLLEEFEELANGGVQSLTLGALDNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVTDSPEAPLVVATPMKVSSISLSGRR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein CYPRO4 probableP40781

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FM0, chain A
Confidence level:confident
Coverage over the Query: 257-407,423-602
View the alignment between query and template
View the model in PyMOL
Template: 1R5M, chain A
Confidence level:confident
Coverage over the Query: 257-405,421-511,530-573,587-602
View the alignment between query and template
View the model in PyMOL
Template: 1P22, chain A
Confidence level:confident
Coverage over the Query: 258-365,376-407,423-511,530-619
View the alignment between query and template
View the model in PyMOL
Template: 4GQ1, chain A
Confidence level:confident
Coverage over the Query: 315-407,423-491,519-574,588-631
View the alignment between query and template
View the model in PyMOL