Citrus Sinensis ID: 047098


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110---
MPKVKTNRVQNPEGWELIKPTLRELQAKMREGGLRAAMFLTRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQPHDHNFQMT
ccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccccHHHHHHHHcccccccccccc
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccHEEEEEEEEEccccccccc
mpkvktnrvqnpegwelIKPTLRELQAKMREGGLRAAMFLTRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDrmmlripgyerlcclrcmqphdhnfqmt
mpkvktnrvqnpegwelikpTLRELQAKMREGGLRAAMFLTRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQPHDHNFQMT
MPKVKTNRVQNPEGWELIKPTLRELQAKMREGGLRAAMFLTRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQPHDHNFQMT
**************WELIKPTLRELQAKMREGGLRAAMFLTRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQ*********
*************GWELIKPTLR*********************ELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQ*********
*********QNPEGWELIKPTLRELQAKMREGGLRAAMFLTRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQPHDHNFQMT
********VQNPEGWELIKPTLRELQAKMREGGLRAAMFLTRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQPH*******
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPKVKTNRVQNPEGWELIKPTLRELQAKMREGGLRAAMFLTRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQPHDHNFQMT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query113 2.2.26 [Sep-21-2011]
Q65WT0145 Protein BUD31 homolog 2 O yes no 0.743 0.579 0.386 8e-17
Q94DE2145 Protein BUD31 homolog 1 O no no 0.778 0.606 0.404 1e-16
P35682145 Protein BUD31 homolog 3 O no no 0.743 0.579 0.358 2e-14
Q6PGH1103 Protein BUD31 homolog OS= yes no 0.601 0.660 0.377 2e-11
O70454144 Protein BUD31 homolog OS= yes no 0.716 0.562 0.330 1e-09
P41223144 Protein BUD31 homolog OS= yes no 0.716 0.562 0.330 1e-09
Q2NKU3144 Protein BUD31 homolog OS= yes no 0.716 0.562 0.330 1e-09
P12805144 Protein BUD31 homolog OS= N/A no 0.752 0.590 0.340 4e-09
Q962X9144 Protein BUD31 homolog OS= N/A no 0.716 0.562 0.330 7e-09
Q567Z7144 Protein BUD31 homolog OS= yes no 0.752 0.590 0.333 2e-08
>sp|Q65WT0|BD31B_ORYSJ Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica GN=Os05g0446300 PE=2 SV=1 Back     alignment and function desciption
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 69/145 (47%), Gaps = 61/145 (42%)

Query: 1   MPKVKTNRVQNPEGWELIKPTLRELQAKMREG------GLRAA----------------- 37
           MPK+KT+RV+ PEGWELI+PTLR+L+AKMRE       G R                   
Sbjct: 1   MPKIKTSRVKYPEGWELIEPTLRDLEAKMREAENDPHDGKRKCEALWPIFRISHQKSRYI 60

Query: 38  --MFLTR---TMELYEFCLDQGYKSQ----IWRKKEKVASCKMNRVLEAVAVMFDIDRMM 88
             ++  R   + ELYEFCLDQG+  +     W+K                          
Sbjct: 61  YDLYYRRKEISKELYEFCLDQGHADKNLIAKWKK-------------------------- 94

Query: 89  LRIPGYERLCCLRCMQPHDHNFQMT 113
              PGYERLCCLRC+Q  DHNF  T
Sbjct: 95  ---PGYERLCCLRCIQTRDHNFATT 116





Oryza sativa subsp. japonica (taxid: 39947)
>sp|Q94DE2|BD31A_ORYSJ Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica GN=Os01g0857700 PE=2 SV=1 Back     alignment and function description
>sp|P35682|BD31C_ORYSJ Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica GN=Os12g0149800 PE=2 SV=2 Back     alignment and function description
>sp|Q6PGH1|BUD31_MOUSE Protein BUD31 homolog OS=Mus musculus GN=Bud31 PE=2 SV=1 Back     alignment and function description
>sp|O70454|BUD31_RAT Protein BUD31 homolog OS=Rattus norvegicus GN=Bud31 PE=2 SV=2 Back     alignment and function description
>sp|P41223|BUD31_HUMAN Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=1 SV=2 Back     alignment and function description
>sp|Q2NKU3|BUD31_BOVIN Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 SV=1 Back     alignment and function description
>sp|P12805|BUD31_XENLA Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1 Back     alignment and function description
>sp|Q962X9|BUD31_BRABE Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1 Back     alignment and function description
>sp|Q567Z7|BUD31_DANRE Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query113
351727539145 uncharacterized protein LOC100305597 [Gl 0.752 0.586 0.437 2e-18
255586760145 Protein G10, putative [Ricinus communis] 0.752 0.586 0.437 3e-18
357518649145 BUD31-like protein [Medicago truncatula] 0.752 0.586 0.430 7e-18
449451114145 PREDICTED: protein BUD31 homolog 2-like 0.752 0.586 0.423 1e-17
116781670145 unknown [Picea sitchensis] 0.752 0.586 0.416 1e-17
225432314145 PREDICTED: protein BUD31 homolog 2 [Viti 0.752 0.586 0.423 1e-17
297736877177 unnamed protein product [Vitis vinifera] 0.752 0.480 0.423 2e-17
388490494145 unknown [Lotus japonicus] 0.752 0.586 0.423 3e-17
224105027142 predicted protein [Populus trichocarpa] 0.752 0.598 0.402 1e-16
15233517145 bud site selection protein 31 [Arabidops 0.778 0.606 0.425 1e-16
>gi|351727539|ref|NP_001237676.1| uncharacterized protein LOC100305597 [Glycine max] gi|356512435|ref|XP_003524924.1| PREDICTED: protein BUD31 homolog 2-like [Glycine max] gi|255626029|gb|ACU13359.1| unknown [Glycine max] Back     alignment and taxonomy information
 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 69/144 (47%), Gaps = 59/144 (40%)

Query: 1   MPKVKTNRVQNPEGWELIKPTLRELQAKMREG------GLRAAMFL-------------- 40
           MPKVKTNRV+ PEGWELI+PTLRELQAKMRE       G R    L              
Sbjct: 1   MPKVKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYI 60

Query: 41  --------TRTMELYEFCLDQGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMML--- 89
                     + ELYEFCLDQGY                             DR ++   
Sbjct: 61  FDLYHRRKEISKELYEFCLDQGY----------------------------ADRNLIAKW 92

Query: 90  RIPGYERLCCLRCMQPHDHNFQMT 113
           + PGYERLCCLRCMQP DHNF  T
Sbjct: 93  KKPGYERLCCLRCMQPRDHNFATT 116




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586760|ref|XP_002533999.1| Protein G10, putative [Ricinus communis] gi|223526001|gb|EEF28380.1| Protein G10, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357518649|ref|XP_003629613.1| BUD31-like protein [Medicago truncatula] gi|355523635|gb|AET04089.1| BUD31-like protein [Medicago truncatula] gi|388508458|gb|AFK42295.1| unknown [Medicago truncatula] gi|388514395|gb|AFK45259.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449451114|ref|XP_004143307.1| PREDICTED: protein BUD31 homolog 2-like [Cucumis sativus] gi|449511850|ref|XP_004164071.1| PREDICTED: protein BUD31 homolog 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|116781670|gb|ABK22196.1| unknown [Picea sitchensis] Back     alignment and taxonomy information
>gi|225432314|ref|XP_002273849.1| PREDICTED: protein BUD31 homolog 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297736877|emb|CBI26078.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388490494|gb|AFK33313.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|224105027|ref|XP_002313660.1| predicted protein [Populus trichocarpa] gi|222850068|gb|EEE87615.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15233517|ref|NP_193843.1| bud site selection protein 31 [Arabidopsis thaliana] gi|297804046|ref|XP_002869907.1| G10 family protein [Arabidopsis lyrata subsp. lyrata] gi|15294272|gb|AAK95313.1|AF410327_1 AT4g21110/F7J7_50 [Arabidopsis thaliana] gi|2911068|emb|CAA17530.1| G10-like protein [Arabidopsis thaliana] gi|7268908|emb|CAB79111.1| G10-like protein [Arabidopsis thaliana] gi|23308281|gb|AAN18110.1| At4g21110/F7J7_50 [Arabidopsis thaliana] gi|297315743|gb|EFH46166.1| G10 family protein [Arabidopsis lyrata subsp. lyrata] gi|332659004|gb|AEE84404.1| bud site selection protein 31 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query113
ZFIN|ZDB-GENE-040720-3144 bud31 "BUD31 homolog (yeast)" 0.274 0.215 0.645 4.6e-17
TAIR|locus:2127383145 AT4G21110 [Arabidopsis thalian 0.964 0.751 0.416 1.4e-16
FB|FBgn0001491144 l(1)10Bb "lethal (1) 10Bb" [Dr 0.274 0.215 0.645 3e-16
UNIPROTKB|C9JCD9103 BUD31 "Protein BUD31 homolog" 0.442 0.485 0.477 1.7e-15
UNIPROTKB|J9PBT8103 BUD31 "Uncharacterized protein 0.442 0.485 0.477 1.7e-15
MGI|MGI:2141291103 Bud31 "BUD31 homolog (yeast)" 0.442 0.485 0.477 1.7e-15
UNIPROTKB|J9PBG0103 J9PBG0 "Uncharacterized protei 0.460 0.504 0.462 2.8e-15
DICTYBASE|DDB_G0270360 221 bud31 "putative transcription 0.274 0.140 0.548 1.8e-11
UNIPROTKB|K7N7E9126 BUD31 "Uncharacterized protein 0.752 0.674 0.391 3.5e-11
UNIPROTKB|E1BV47144 BUD31 "Uncharacterized protein 0.911 0.715 0.375 3.2e-10
ZFIN|ZDB-GENE-040720-3 bud31 "BUD31 homolog (yeast)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 107 (42.7 bits), Expect = 4.6e-17, Sum P(3) = 4.6e-17
 Identities = 20/31 (64%), Positives = 24/31 (77%)

Query:     1 MPKVKTNRVQNPEGWELIKPTLRELQAKMRE 31
             MPKVK +R   P+GWEL++PTL EL  KMRE
Sbjct:     1 MPKVKRSRKPPPDGWELVEPTLDELDQKMRE 31


GO:0005634 "nucleus" evidence=IEA
TAIR|locus:2127383 AT4G21110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0001491 l(1)10Bb "lethal (1) 10Bb" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|C9JCD9 BUD31 "Protein BUD31 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9PBT8 BUD31 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:2141291 Bud31 "BUD31 homolog (yeast)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|J9PBG0 J9PBG0 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270360 bud31 "putative transcription factor" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|K7N7E9 BUD31 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BV47 BUD31 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query113
pfam01125145 pfam01125, G10, G10 protein 2e-14
COG5132146 COG5132, BUD31, Cell cycle control protein, G10 fa 4e-09
>gnl|CDD|216312 pfam01125, G10, G10 protein Back     alignment and domain information
 Score = 64.2 bits (157), Expect = 2e-14
 Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 62/146 (42%)

Query: 1   MPKVKTNRVQN-PEGWELIKPTLRELQAKMREG------GLRAAMFLTRTM--------- 44
           MP+++T+R +  PEG++ I+PTL E +AKMR+       G R    L             
Sbjct: 1   MPRIRTSRTKKPPEGFDKIEPTLDEFEAKMRDAENEPHEGKRKKELLWPIFRIHHQRSRY 60

Query: 45  -------------ELYEFCLDQGYKSQ----IWRKKEKVASCKMNRVLEAVAVMFDIDRM 87
                        ELY++ L + Y        W+K                         
Sbjct: 61  VYDLYYKRKAISRELYDWLLKEKYADANLIAKWKK------------------------- 95

Query: 88  MLRIPGYERLCCLRCMQPHDHNFQMT 113
               PGYE+LCCLRC+Q  + NF  T
Sbjct: 96  ----PGYEKLCCLRCIQTGETNFGGT 117


Length = 145

>gnl|CDD|227461 COG5132, BUD31, Cell cycle control protein, G10 family [Transcription / Cell division and chromosome partitioning] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 113
KOG3404145 consensus G10 protein/predicted nuclear transcript 100.0
PF01125145 G10: G10 protein; InterPro: IPR001748 A Xenopus pr 100.0
COG5132146 BUD31 Cell cycle control protein, G10 family [Tran 100.0
>KOG3404 consensus G10 protein/predicted nuclear transcription regulator [Transcription] Back     alignment and domain information
Probab=100.00  E-value=9.7e-49  Score=294.85  Aligned_cols=88  Identities=49%  Similarity=0.953  Sum_probs=85.7

Q ss_pred             CCCCCCCCCCCCCchhchHHHHHHHHHHHHhccc------cc-------------------hhhhhh---hHHHHHHHHh
Q 047098            1 MPKVKTNRVQNPEGWELIKPTLRELQAKMREGGL------RA-------------------AMFLTR---TMELYEFCLD   52 (113)
Q Consensus         1 MPkirt~~~~pPeGwelIepTL~el~~KMReae~------rk-------------------~lyykr---S~eLYe~cl~   52 (113)
                      |||||++|++||+|||+|||||+||++||||||+      |+                   ||||||   |+|||+||++
T Consensus         1 mpkv~~~rk~~Pdg~e~IeptL~e~e~kmReae~~~~~~~~~~E~lwpIfqlhHQrsRYiYdlyykR~~IS~eLY~~~l~   80 (145)
T KOG3404|consen    1 MPKVKRSRKPPPDGWELIEPTLEEFEAKMREAETEPHEGKRKTESLWPIFQLHHQRSRYIYDLYYKRKAISRELYDYCLK   80 (145)
T ss_pred             CCccCcCCCCCCcchhhhhhhHHHHHHHHHHhhcCcccCCCcchhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999      32                   999999   9999999999


Q ss_pred             cCCCChhhhhhhhhhhhhhHHHHHHHHHHhhhhcccccccchhhhhhhcccccCCCCCCCC
Q 047098           53 QGYKSQIWRKKEKVASCKMNRVLEAVAVMFDIDRMMLRIPGYERLCCLRCMQPHDHNFQMT  113 (113)
Q Consensus        53 ~gyaD~~Lia~~~~~~~~~~~~~~~~~~~~~~~~~kWkkpGYEkLCCLrCIQ~~d~NfgtT  113 (113)
                      ++|||++|||                         ||||+|||+|||||||||+|+|||||
T Consensus        81 ~~yaD~~Lia-------------------------kWkk~GYE~LCClRCIq~~dsn~Gt~  116 (145)
T KOG3404|consen   81 EKYADKNLIA-------------------------KWKKQGYENLCCLRCIQTRDSNFGTT  116 (145)
T ss_pred             cccchHHHHH-------------------------HHhhcCccceeeeeeccccccCCCce
Confidence            9999999999                         99999999999999999999999997



>PF01125 G10: G10 protein; InterPro: IPR001748 A Xenopus protein known as G10 [] has been found to be highly conserved in a wide range of eukaryotic species Back     alignment and domain information
>COG5132 BUD31 Cell cycle control protein, G10 family [Transcription / Cell division and chromosome partitioning] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00