Citrus Sinensis ID: 047131
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 889 | 2.2.26 [Sep-21-2011] | |||||||
| O24370 | 899 | Linoleate 13S-lipoxygenas | N/A | no | 0.929 | 0.918 | 0.533 | 0.0 | |
| P38418 | 896 | Lipoxygenase 2, chloropla | yes | no | 0.924 | 0.917 | 0.485 | 0.0 | |
| Q8GSM2 | 896 | Lipoxygenase 2.3, chlorop | N/A | no | 0.897 | 0.890 | 0.490 | 0.0 | |
| Q84YK8 | 941 | Probable lipoxygenase 8, | yes | no | 0.868 | 0.820 | 0.497 | 0.0 | |
| P38419 | 924 | Lipoxygenase 7, chloropla | no | no | 0.869 | 0.836 | 0.490 | 0.0 | |
| P93184 | 936 | Lipoxygenase 2.1, chlorop | N/A | no | 0.910 | 0.864 | 0.460 | 0.0 | |
| O24371 | 914 | Linoleate 13S-lipoxygenas | N/A | no | 0.890 | 0.866 | 0.421 | 0.0 | |
| Q9FNX8 | 926 | Lipoxygenase 4, chloropla | no | no | 0.885 | 0.849 | 0.409 | 0.0 | |
| Q9LNR3 | 919 | Lipoxygenase 3, chloropla | no | no | 0.889 | 0.860 | 0.404 | 0.0 | |
| Q8GSM3 | 932 | Lipoxygenase 2.2, chlorop | N/A | no | 0.852 | 0.813 | 0.437 | 0.0 |
| >sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/913 (53%), Positives = 626/913 (68%), Gaps = 87/913 (9%)
Query: 7 QKSLKIRVGFSASNNIKAIAGATAPSVVSVKVKAVVTVKRTILGGTRSNNREDV-TYFEK 65
+ + ++ ++ ++ KA+ +T + VKAVVTV++ + S +D+ K
Sbjct: 44 KNNFRVHHNYNGASTTKAVLSSTEKAT---GVKAVVTVQKQV-NLNLSRGLDDIGDLLGK 99
Query: 66 PLFLGLVCAELD-SNGSEKPTINVYASVAGVDLFNIRYEAEFEVPSSFGDVGGILVQHEN 124
L L +V AELD G EKP I YA + YEA+F +P FG+VG IL+++E+
Sbjct: 100 SLLLWIVAAELDHKTGIEKPGIRAYAHRGRDVDGDTHYEADFVIPQDFGEVGAILIENEH 159
Query: 125 QKEMYLKDVVLDGFLDGPMNITCDSWVQPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDE 184
KEMY+K++V+DGF+ G + ITC+SWV + KR+FFTNKSYLPSQTP+G++RLR+E
Sbjct: 160 HKEMYVKNIVIDGFVHGKVEITCNSWVHSKFDNPDKRIFFTNKSYLPSQTPSGVSRLREE 219
Query: 185 ELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPELHDLCLVAKSTLILGVAEQDALTV 244
EL++LRG G GER+ ++RIYDYDVYNDLG+ D+N + AK ++ G
Sbjct: 220 ELVTLRGDGIGERKVFERIYDYDVYNDLGEADSNND------DAKRPVLGG--------- 264
Query: 245 QQKIWLEPYKLEEHLPDLINLYYCTDPESETRSDSNYVPRDEAFSRIKQATFSAKTLYSL 304
K P + + P DP SETRS YVPRDEAFS +K FS T+YS+
Sbjct: 265 --KELPYPRRCKTGRPR-----SKKDPLSETRSTFVYVPRDEAFSEVKSVAFSGNTVYSV 317
Query: 305 LHGLIPAIKAAFGENKDLGFPYFTAIDTLFNQGIALPPQEQEEFWGRNL-PELIQLA--- 360
LH ++PA+++ + +LGFP+F AID+LFN G+ LP ++ N+ P LI+
Sbjct: 318 LHAVVPALESVV-TDPNLGFPHFPAIDSLFNVGVDLPGLGDKKSGLFNVVPRLIKAISDT 376
Query: 361 -KHILKFAT---MERHQFFWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPE 416
K +L F + ++R +F WFRD EF RQTLAGLNP +I+LVT+WPL S LDP +YGPPE
Sbjct: 377 RKDVLLFESPQLVQRDKFSWFRDVEFARQTLAGLNPYSIRLVTEWPLRSKLDPKVYGPPE 436
Query: 417 SAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFL 476
S IT E +EK +G +TV +A++QKKLFILDY+DLLLPYV KV +L+G+ LY SRT+FFL
Sbjct: 437 SEITKELIEKEIGNYMTVEQAVQQKKLFILDYHDLLLPYVNKVNELKGSMLYGSRTIFFL 496
Query: 477 TSEGTLRPLVIELTRPPMNGQPQWKQAFQPS-WQSTESWLWRLAKAHVLAHDSGYHQLVS 535
T +GTL+PL IELTRPP++ +PQWK+ + P+ W +T +WLW+LAKAHVL+HDSGYHQLVS
Sbjct: 497 TPQGTLKPLAIELTRPPVDDKPQWKEVYSPNDWNATGAWLWKLAKAHVLSHDSGYHQLVS 556
Query: 536 HWYVVTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLK 595
HW LRTH CTEPY+ A+ R LSAMHPI LL
Sbjct: 557 HW-----------------------------LRTHCCTEPYIIASNRQLSAMHPIYRLLH 587
Query: 596 PHLRYTMETNTLARESLINA---------------ELSSAVYDQLWRFDYEALPKDLIKR 640
PH RYTME N LARE+LINA ELSS Y WRFD EALP++LI R
Sbjct: 588 PHFRYTMEINALAREALINANGVIESSFFPGKYAIELSSIAYGAEWRFDQEALPQNLISR 647
Query: 641 GMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTD-SNH---DQSLVQSDKELQAW 696
G+AV+DP P+GLKL IEDYP+ANDGL LW LK+WVT+ NH +L++SDKELQAW
Sbjct: 648 GLAVEDPNEPHGLKLAIEDYPFANDGLVLWDILKQWVTNYVNHYYPQTNLIESDKELQAW 707
Query: 697 WTEIRTVGHADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRP 756
W+EI+ VGH DK+DEPWWP LKT DLI IITTIVWV SGHHAAVNFGQY+YAGY PNRP
Sbjct: 708 WSEIKNVGHGDKRDEPWWPELKTPNDLIGIITTIVWVTSGHHAAVNFGQYSYAGYFPNRP 767
Query: 757 SIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLG 816
++AR+ MPTE+P +E + ++F+ P+ LLR FP+Q+QA +VMA+LDVLS HSPDEEY+G
Sbjct: 768 TVARSKMPTEDPTAE-EWEWFMNKPEEALLRCFPSQIQATKVMAILDVLSNHSPDEEYIG 826
Query: 817 NQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKPFSGR 876
++EP W +DP I AAFE FSG++ ELEGIID RN D KL NRNGA V+PYELLKP+S
Sbjct: 827 EKIEPYWAEDPVINAAFEVFSGKLKELEGIIDARNNDSKLSNRNGAGVMPYELLKPYSEP 886
Query: 877 GVTEKGVPYSISI 889
GVT KGVPYSISI
Sbjct: 887 GVTGKGVPYSISI 899
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Plant lipoxygenase involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence. May not be involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. Has also some activity with phosphatidylglycerol, but not with galactolipids. Solanum tuberosum (taxid: 4113) EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2 |
| >sp|P38418|LOX2_ARATH Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 | Back alignment and function description |
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| >sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 | Back alignment and function description |
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| >sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1 | Back alignment and function description |
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| >sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 889 | ||||||
| 71999169 | 898 | lipoxygenase LOX1 [Populus deltoides] | 0.933 | 0.924 | 0.583 | 0.0 | |
| 224053392 | 897 | predicted protein [Populus trichocarpa] | 0.932 | 0.924 | 0.576 | 0.0 | |
| 255544764 | 900 | lipoxygenase, putative [Ricinus communis | 0.933 | 0.922 | 0.585 | 0.0 | |
| 71999171 | 903 | lipoxygenase LOX2 [Populus deltoides] | 0.923 | 0.909 | 0.589 | 0.0 | |
| 213876486 | 900 | lipoxygenase [Camellia sinensis] | 0.895 | 0.884 | 0.575 | 0.0 | |
| 225435556 | 901 | PREDICTED: linoleate 13S-lipoxygenase 2- | 0.934 | 0.922 | 0.558 | 0.0 | |
| 18461098 | 895 | lipoxygenase [Citrus jambhiri] | 0.922 | 0.916 | 0.572 | 0.0 | |
| 268636245 | 901 | lipoxygenase [Vitis vinifera] | 0.934 | 0.922 | 0.558 | 0.0 | |
| 255544760 | 789 | lipoxygenase, putative [Ricinus communis | 0.856 | 0.964 | 0.589 | 0.0 | |
| 229554825 | 901 | lipoxygenase [Camellia sinensis] | 0.915 | 0.903 | 0.562 | 0.0 |
| >gi|71999169|gb|AAZ57444.1| lipoxygenase LOX1 [Populus deltoides] | Back alignment and taxonomy information |
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Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/926 (58%), Positives = 651/926 (70%), Gaps = 96/926 (10%)
Query: 2 SSPSFQKSL------KIRVGFSASNNIKAIAGATAPSVVSVKVKAVVTVKRTILG----- 50
S P + +SL K+RVG+ +IK+IA T S +KAVVTVK T++
Sbjct: 31 SFPVYSRSLSTKANKKVRVGYK-HGSIKSIASVTQ---QSTDIKAVVTVKETVVDFWTEI 86
Query: 51 GTRSNNREDVTYFEKPLFLGLVCAELD-SNGSEKPTINVYASVAGVDLFNIRYEAEFEVP 109
G + F K L L LV AELD G EKP+I YA + +I+YEA+F VP
Sbjct: 87 GIERGLDDFTDLFGKTLLLELVSAELDPKTGLEKPSIRKYAHKIDHEGEDIKYEADFVVP 146
Query: 110 SSFGDVGGILVQHENQKEMYLKDVVLDGFLDGPMNITCDSWVQPLAIDAQKRVFFTNKSY 169
FG+VG I V++E+ KEMYL DVVLDGF GP+++TCDSW+ P + +KR+FFTNKSY
Sbjct: 147 PDFGEVGAIFVENEHHKEMYLHDVVLDGFPTGPVHVTCDSWIHPKFDNKKKRLFFTNKSY 206
Query: 170 LPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPELHDLCLVAK 229
LPS+TPNGLT+LR EEL +LRG+ GER+ +RIYDYDVYNDLG+PD++PE
Sbjct: 207 LPSETPNGLTKLRKEELETLRGNDSGERKKGERIYDYDVYNDLGNPDSDPE--------T 258
Query: 230 STLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDPESETRSDSNYVPRDEAFS 289
+ +LG E P + P +DP +ETRS S YVPRDE FS
Sbjct: 259 ARPVLGGQEHPY----------PRRCRTGRPRT-----ESDPLTETRSSSFYVPRDEEFS 303
Query: 290 RIKQATFSAKTLYSLLHGLIPAIKAAFGENKDLGFPYFTAIDTLFNQGIALPPQEQEEFW 349
IK TFSA+TL S+LH L+P++ A ++ DLGFP+F++ID LFN+GI LPP +++ FW
Sbjct: 304 EIKMGTFSARTLKSVLHALVPSLSTAIVDS-DLGFPFFSSIDALFNEGINLPPLKKQGFW 362
Query: 350 GRNLPELIQL----AKHILKFAT---MERHQFFWFRDEEFGRQTLAGLNPCAIQLVTKWP 402
LP L + K ILKF T MER +FFWFRDEEF RQTL+GLNPC+I++VT+WP
Sbjct: 363 KDLLPNLFRAITDGTKDILKFETPETMERDRFFWFRDEEFARQTLSGLNPCSIKMVTEWP 422
Query: 403 LESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLLLPYVEKVRQL 462
L S LDP IYGP ESAITTE VE+ + G +T +A++ +KLFILDY+DL LP+V K+R+L
Sbjct: 423 LRSKLDPEIYGPQESAITTEMVEQEIKGFMTCGQAVKDQKLFILDYHDLFLPFVSKIREL 482
Query: 463 EGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAH 522
+GTTLY SRTLFFLT EGTLRPL IELTRPPM+G+PQWKQ F+P+W ST+ WLWRLAKAH
Sbjct: 483 KGTTLYGSRTLFFLTHEGTLRPLAIELTRPPMDGKPQWKQVFRPTWHSTDVWLWRLAKAH 542
Query: 523 VLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTR 582
VLAH+SGYHQL+SHW LRTH CTEPY+ A R
Sbjct: 543 VLAHESGYHQLISHW-----------------------------LRTHCCTEPYIIAAHR 573
Query: 583 HLSAMHPICTLLKPHLRYTMETNTLARESLINA---------------ELSSAVYDQLWR 627
LS MHPI LL PH RYTME N LAR+ LI+A ELSS VYDQ WR
Sbjct: 574 QLSEMHPIYRLLHPHFRYTMEINALARQYLISAKGVIETSFFPGKYSMELSSVVYDQEWR 633
Query: 628 FDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTD-SNH---D 683
FDYEALPKDLI RGMAV+DP+AP+GLKL +EDYPYANDGL LW +K+WV+D NH D
Sbjct: 634 FDYEALPKDLINRGMAVEDPSAPHGLKLMVEDYPYANDGLVLWDIIKEWVSDYVNHYYPD 693
Query: 684 QSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNF 743
SL+ SD ELQAWWTE+RTVGHADKKDEPWWP LKT +DLIE +TTI+W+ASGHHAAVNF
Sbjct: 694 SSLIVSDNELQAWWTEVRTVGHADKKDEPWWPVLKTPQDLIETLTTIIWIASGHHAAVNF 753
Query: 744 GQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLD 803
GQY YAGY PNRP+ AR NMPTE+P E +K F E P+V+LL +FP+Q+QA VMA+LD
Sbjct: 754 GQYTYAGYFPNRPTTARMNMPTEDPNDEL-LKLFWEKPEVILLTTFPSQIQATTVMAILD 812
Query: 804 VLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGAR 863
VLS HSPDEEYLG Q+EP W ++P I AAF +F+GR+ E EGIIDERNAD KLKNRNGA
Sbjct: 813 VLSNHSPDEEYLGQQIEPAWTEEPAINAAFVKFNGRLKEFEGIIDERNADTKLKNRNGAG 872
Query: 864 VVPYELLKPFSGRGVTEKGVPYSISI 889
VVPYELLKPFS GVT KGVPYSISI
Sbjct: 873 VVPYELLKPFSDPGVTGKGVPYSISI 898
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Source: Populus deltoides Species: Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053392|ref|XP_002297796.1| predicted protein [Populus trichocarpa] gi|222845054|gb|EEE82601.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255544764|ref|XP_002513443.1| lipoxygenase, putative [Ricinus communis] gi|223547351|gb|EEF48846.1| lipoxygenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|71999171|gb|AAZ57445.1| lipoxygenase LOX2 [Populus deltoides] | Back alignment and taxonomy information |
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| >gi|213876486|gb|ACJ54281.1| lipoxygenase [Camellia sinensis] | Back alignment and taxonomy information |
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| >gi|225435556|ref|XP_002285574.1| PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Vitis vinifera] gi|297746381|emb|CBI16437.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|18461098|dbj|BAB84352.1| lipoxygenase [Citrus jambhiri] | Back alignment and taxonomy information |
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| >gi|268636245|gb|ACZ17391.1| lipoxygenase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255544760|ref|XP_002513441.1| lipoxygenase, putative [Ricinus communis] gi|223547349|gb|EEF48844.1| lipoxygenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|229554825|gb|ACQ76787.1| lipoxygenase [Camellia sinensis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 889 | ||||||
| TAIR|locus:2096915 | 896 | LOX2 "lipoxygenase 2" [Arabido | 0.676 | 0.670 | 0.520 | 1.7e-200 | |
| TAIR|locus:2030215 | 926 | LOX4 "lipoxygenase 4" [Arabido | 0.672 | 0.645 | 0.432 | 1.4e-161 | |
| UNIPROTKB|P38419 | 924 | CM-LOX1 "Lipoxygenase 7, chlor | 0.678 | 0.652 | 0.505 | 2.3e-158 | |
| TAIR|locus:2018848 | 919 | LOX3 "lipoxygenase 3" [Arabido | 0.672 | 0.650 | 0.409 | 4.8e-157 | |
| TAIR|locus:2008808 | 917 | LOX6 "lipoxygenase 6" [Arabido | 0.834 | 0.809 | 0.407 | 2e-152 | |
| TAIR|locus:2011030 | 859 | LOX1 "lipoxygenase 1" [Arabido | 0.304 | 0.315 | 0.492 | 7.2e-139 | |
| TAIR|locus:2087837 | 886 | LOX5 [Arabidopsis thaliana (ta | 0.669 | 0.671 | 0.393 | 6e-133 | |
| UNIPROTKB|P29250 | 870 | LOX1.1 "Linoleate 9S-lipoxygen | 0.829 | 0.847 | 0.359 | 3.7e-119 | |
| ZFIN|ZDB-GENE-060623-19 | 676 | zgc:136911 "zgc:136911" [Danio | 0.335 | 0.440 | 0.3 | 1.1e-33 | |
| UNIPROTKB|H9L001 | 681 | Gga.6903 "Uncharacterized prot | 0.325 | 0.424 | 0.313 | 8e-32 |
| TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1604 (569.7 bits), Expect = 1.7e-200, Sum P(2) = 1.7e-200
Identities = 330/634 (52%), Positives = 413/634 (65%)
Query: 269 TDPESETRSDSN-YVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGENKDLGFPYF 327
TDP SE R YVPRDE FS K +F+ K + + L + P I++ ++ FP+F
Sbjct: 283 TDPSSEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQE-PFPHF 341
Query: 328 TAIDTLFNQGIALPPQEQE-EFWGRNLPELIQLAKHILKF---ATMERHQFFWFRDEEFG 383
AI LF +GI LP R + L + IL+F + R +F W RD+EF
Sbjct: 342 KAIQNLFEEGIQLPKDAGLLPLLPRIIKALGEAQDDILQFDAPVLINRDRFSWLRDDEFA 401
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
RQTLAGLNP +IQLV +WPL S LDPA+YG P S IT E VE+ + G++TV EA++ K+L
Sbjct: 402 RQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIVEREVKGNMTVDEALKNKRL 461
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNGQPQWKQA 503
F+LDY+DLLLPYV KVR+L TTLY SRTLFFL+ + TLRP+ IELT PP +PQWKQ
Sbjct: 462 FVLDYHDLLLPYVNKVRELNNTTLYASRTLFFLSDDSTLRPVAIELTCPPNINKPQWKQV 521
Query: 504 FQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLR-HLKKKDYLTNCI 562
F P + +T WLW LAK H ++HD+GYHQL+SHW LR H + Y+
Sbjct: 522 FTPGYDATSCWLWNLAKTHAISHDAGYHQLISHW-----------LRTHACTEPYI---- 566
Query: 563 HIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRY---TMETNTLARESLINAELSS 619
I R + P H I + L +ET + + ELSS
Sbjct: 567 -IAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYAL--ELSS 623
Query: 620 AVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTD 679
AVY +LWRFD E LP DLIKRG+A +D TA +G++LTI DYP+ANDGL LW A+K+WVTD
Sbjct: 624 AVYGKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTD 683
Query: 680 S-NH---DQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDLIEIITTIVWVAS 735
H D+ L+ SD+ELQ WW+E+R +GH DKKDEPWWP LKT +DLI ++TTI WV S
Sbjct: 684 YVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTS 743
Query: 736 GHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQA 795
GHHAAVNFGQY Y GY PNRP+ R MPTE+P E +K F E+P+ VLL+++P+Q QA
Sbjct: 744 GHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEA-LKEFYESPEKVLLKTYPSQKQA 802
Query: 796 IQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMK 855
VM LD+LSTHSPDEEY+G Q E +W +P I AAFERF G++ LEG+IDERN ++
Sbjct: 803 TLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNIT 862
Query: 856 LKNRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
LKNR GA VV YELLKP S GVT GVPYSISI
Sbjct: 863 LKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
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| TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060623-19 zgc:136911 "zgc:136911" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H9L001 Gga.6903 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q84YK8 | LOXC2_ORYSJ | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.4971 | 0.8683 | 0.8204 | yes | no |
| P38418 | LOX2_ARATH | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.4851 | 0.9246 | 0.9174 | yes | no |
| O24370 | LOX21_SOLTU | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.5334 | 0.9291 | 0.9187 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.13.11 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.13.11.12 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 889 | |||
| PLN02305 | 918 | PLN02305, PLN02305, lipoxygenase | 0.0 | |
| pfam00305 | 667 | pfam00305, Lipoxygenase, Lipoxygenase | 0.0 | |
| PLN02264 | 919 | PLN02264, PLN02264, lipoxygenase | 0.0 | |
| PLN02337 | 866 | PLN02337, PLN02337, lipoxygenase | 0.0 | |
| cd01751 | 137 | cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox | 1e-30 | |
| smart00308 | 105 | smart00308, LH2, Lipoxygenase homology 2 (beta bar | 3e-10 | |
| pfam01477 | 115 | pfam01477, PLAT, PLAT/LH2 domain | 2e-06 |
| >gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase | Back alignment and domain information |
|---|
Score = 816 bits (2108), Expect = 0.0
Identities = 406/898 (45%), Positives = 549/898 (61%), Gaps = 103/898 (11%)
Query: 35 SVKVKAVVTVKRTILGGTRSNNREDVTYFEKPLFLG----LVCAELD-SNGSEKPTINVY 89
+ V+AV+T+++ I + YF + G LV E+D GS K +V
Sbjct: 81 GIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGK---SVE 137
Query: 90 ASVAGV------DLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLDGPM 143
+SV G D + Y A+F VP FG G +LV + + KE YL ++V+ GF DGP+
Sbjct: 138 SSVRGWLPKPSNDPHIVEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPI 197
Query: 144 NITCDSWVQPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRI 203
++W+ + + R+ F N++YLPSQTP G+ LR E+L+SLRG+G+GER+P+DRI
Sbjct: 198 FFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDLLSLRGNGKGERKPHDRI 257
Query: 204 YDYDVYNDLGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLI 263
YDY YNDLG+PD + +L + +LG E W P + P
Sbjct: 258 YDYAPYNDLGNPDKDEDL--------ARPVLGGEE----------WPYPRRCRTGRPPT- 298
Query: 264 NLYYCTDPESETRSDSN---YVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGENK 320
DP E+R + YVPRDE F IK+ TFSA L +LLH LIP+I AA +
Sbjct: 299 ----KKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAAL-SSS 353
Query: 321 DLGFPYFTAIDTLFNQGIALPPQEQEE-----FWGRNLPELIQLAKHILKF---ATMERH 372
D+ F F+ ID L+N GI L +E ++ F G + +++ +++ +LK+ A ++R
Sbjct: 354 DIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQVLSVSERLLKYDIPAVIKRD 413
Query: 373 QFFWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDI 432
+F W RD EF RQ LAG+NP I+++ ++P+ S LDPA+YGPPESA+T E +E+ + G +
Sbjct: 414 RFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG-M 472
Query: 433 TVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRP 492
TV +AIE+K+LFILDY+D+LLP++EK+ L Y SRT+FF + G LRP+ IEL+ P
Sbjct: 473 TVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLP 532
Query: 493 PMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHL 552
P P K + +T W+W+LAKAHV ++D+G HQLV+HW
Sbjct: 533 PTPSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW--------------- 577
Query: 553 KKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESL 612
LRTHAC EPY+ AT R LSAMHPI LL PH+RYT+E N LAR+SL
Sbjct: 578 --------------LRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSL 623
Query: 613 INA---------------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTI 657
IN ELSSA Y +WRFD EALP DLI+RGMA +DP+ P G++L I
Sbjct: 624 INGGGIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVI 683
Query: 658 EDYPYANDGLNLWFALKKWVTD-SNH---DQSLVQSDKELQAWWTEIRTVGHADKKDEPW 713
EDYPYA DGL +W A+K+WV +H + + + SD ELQAWW EI+ GH DK++EPW
Sbjct: 684 EDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPW 743
Query: 714 WPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKD 773
WP L T EDL I+TT++W+ASG HAA+NFGQY + GYVPNRP++ R +P E ++ D
Sbjct: 744 WPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQE---NDPD 800
Query: 774 MKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLG--NQMEPTWGKDPTIFA 831
+ F+ NPQ L S PTQLQA +VMAV D LSTHSPDEEYLG + W D +
Sbjct: 801 YEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVK 860
Query: 832 AFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
F +FS R+ E+E I+ERN D++LKNRNGA + PYELL P SG GVT +G+P SISI
Sbjct: 861 LFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918
|
Length = 918 |
| >gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 889 | |||
| PLN02305 | 918 | lipoxygenase | 100.0 | |
| PLN02264 | 919 | lipoxygenase | 100.0 | |
| PLN02337 | 866 | lipoxygenase | 100.0 | |
| PF00305 | 667 | Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li | 100.0 | |
| cd01751 | 137 | PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re | 100.0 | |
| smart00308 | 105 | LH2 Lipoxygenase homology 2 (beta barrel) domain. | 99.1 | |
| PF01477 | 113 | PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg | 98.71 | |
| cd00113 | 116 | PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin | 98.46 | |
| cd02899 | 109 | PLAT_SR Scavenger receptor protein. A subfamily of | 97.8 | |
| cd01756 | 120 | PLAT_repeat PLAT/LH2 domain repeats of family of p | 97.57 | |
| cd01753 | 113 | PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u | 97.47 | |
| cd01752 | 120 | PLAT_polycystin PLAT/LH2 domain of polycystin-1 li | 97.37 | |
| cd01757 | 114 | PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter | 97.16 | |
| cd01754 | 129 | PLAT_plant_stress PLAT/LH2 domain of plant-specifi | 96.69 |
| >PLN02305 lipoxygenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-253 Score=2171.63 Aligned_cols=795 Identities=50% Similarity=0.908 Sum_probs=761.0
Q ss_pred eeEEEEEEEEEeecccCCCC---CCCccc-ccCCCcEEEEEEeceec-cCCCc---ccccccccccccCCCcceEEEEEE
Q 047131 35 SVKVKAVVTVKRTILGGTRS---NNREDV-TYFEKPLFLGLVCAELD-SNGSE---KPTINVYASVAGVDLFNIRYEAEF 106 (889)
Q Consensus 35 ~~~~~~~v~~~~~~~~~~~~---~~~d~~-~~~gk~v~l~LvS~~~d-~~g~~---~~~~~~~~~~~~~~~~~~~y~v~F 106 (889)
..+|||+||||+|+++++++ +.+|++ |++||+|+|||||++++ +||+| +++|++|+++...++++++|+|+|
T Consensus 81 ~~~i~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~~~~~~~~~~~~~~f 160 (918)
T PLN02305 81 GIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKPSNDPHIVEYAADF 160 (918)
T ss_pred CCeEEEEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccCCCCCCCceEEEEEE
Confidence 35899999999999998887 778999 99999999999999999 78854 589999998633237788999999
Q ss_pred eccCCCCCeeEEEEEecCCCceEEEEEEEcccCCCceEEeeccCcccCCCCCcceEEeeccccCCCCCChhhHHHHHHHH
Q 047131 107 EVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLDGPMNITCDSWVQPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEEL 186 (889)
Q Consensus 107 ~v~~~fG~pgai~V~n~~~~e~fl~~i~l~~~p~g~i~F~cnsWV~~~~~~~~~rvFf~nk~yLP~~tP~~l~~lR~~EL 186 (889)
+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||.++|+.+||||+||+|||+|||+||++|||+||
T Consensus 161 ~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~eL 240 (918)
T PLN02305 161 TVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDL 240 (918)
T ss_pred eeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCcCCCCceeecccccCCCCCCCCCcchhhhhhhhccccccccchhhhhhhhhhccCcccCC--CCCCcccC
Q 047131 187 ISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLE--EHLPDLIN 264 (889)
Q Consensus 187 ~~lRG~g~g~r~~~dRiYdyd~ynDlg~pd~~~~~~r~~~~~~~~pvlGg~~~~~~~~~~~~~~~pyprr--tgr~~~~~ 264 (889)
++|||||+||||+|||||||||||||||||++++++| |||||++ |||||| |||||
T Consensus 241 ~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~R--------pvLGG~~------------~PYPRR~RTGR~~--- 297 (918)
T PLN02305 241 LSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLAR--------PVLGGEE------------WPYPRRCRTGRPP--- 297 (918)
T ss_pred HHhcCCCCCcCCccccccchhhhccCCCCCCCccccC--------cccCCCC------------CCCCCcCcCCCCC---
Confidence 9999999999999999999999999999999999999 9999988 999999 99999
Q ss_pred ccccCCCCCCCCCC---CCccCCCCccChhhhcchhhhhHHHHHhhhHHHHHHhhcCCCCCCCCCHHHHHHHhccCCCCC
Q 047131 265 LYYCTDPESETRSD---SNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGENKDLGFPYFTAIDTLFNQGIALP 341 (889)
Q Consensus 265 ~~~~~d~~~e~r~~---~~yvPrDe~Fs~~K~~~f~~~~l~~~~~~~~p~l~~~~~~~~~~~f~~f~di~~ly~~g~~~~ 341 (889)
+++||.+|||.. .+||||||+|+++|+++|+++++||++|.++|.|+++++. +..+|++|+||++||++|+++|
T Consensus 298 --t~~Dp~~Esr~~~~~~~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~-~~~~F~~f~~i~~Ly~~g~~l~ 374 (918)
T PLN02305 298 --TKKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSS-SDIPFTCFSDIDKLYNDGILLK 374 (918)
T ss_pred --CCCCCcccccccCCCCcCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCC-CCCCCCCHHHHHHHhccCCcCC
Confidence 999999999964 4799999999999999999999999999999999999876 7899999999999999999999
Q ss_pred Cchhhhhhcc-ch--hHHHHh---hhhhccccc---cccccccccccHHHHHHhhcCCCccchhcccCCCCCCCCCCCCC
Q 047131 342 PQEQEEFWGR-NL--PELIQL---AKHILKFAT---MERHQFFWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIY 412 (889)
Q Consensus 342 ~~~~~~~~~~-~~--p~~~~~---~e~~lkf~~---~~~~~~~W~~DeeFgrQ~LaG~NP~~I~r~~~~P~~s~ldp~~y 412 (889)
.... +.+++ ++ +.++++ +|++||||+ |++|+++|++|+|||||+|||+||++|+||++||++|+|||++|
T Consensus 375 ~~~~-~~~~~~p~~~~~~~~i~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~y 453 (918)
T PLN02305 375 TEEP-KDIGLNPFLGNFMKQVLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVY 453 (918)
T ss_pred chhh-hhhhcCCchHHHHHHhhhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCcccc
Confidence 7422 33333 23 235555 689999999 99999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHhhcCCcccHHHHHhcCceEEecccccccchhhccccCCCcccccceeEeeecCCCceeeEEEEeeCC
Q 047131 413 GPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRP 492 (889)
Q Consensus 413 g~~~s~It~e~i~~~l~g~~tl~eal~~grLFi~Dy~d~~lp~v~~in~~~g~~~YA~~~Lffl~~dG~L~PlAIqL~~p 492 (889)
|+++|+||+|||+..|+| +||+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++
T Consensus 454 G~~~s~iT~e~ve~~L~G-~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~ 532 (918)
T PLN02305 454 GPPESALTEELIERELEG-MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLP 532 (918)
T ss_pred CCcCCCcCHHHHHhhcCC-CcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCC
Confidence 999999999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceeecCCCCCCCchHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHhhccccccccccccccccccccc
Q 047131 493 PMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHAC 572 (889)
Q Consensus 493 p~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HQlvsHl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrTHlv 572 (889)
++++++++++||||++++++.|.|+||||||++||++|||+|+|| |+||+|
T Consensus 533 p~~~~p~~~~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHl-----------------------------LrTHlv 583 (918)
T PLN02305 533 PTPSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW-----------------------------LRTHAC 583 (918)
T ss_pred CCCCCCCcceeeCCCCCCCCchHHHHHHHHHHhccHHHHHHHHHH-----------------------------hhHHHH
Confidence 988878888999998777789999999999999999999999999 999999
Q ss_pred hhhHHHHhcccCCCcCchhhccchhhhhhccchHHHHhhccCH---------------HHHHHHHcccccCCcCCCchHH
Q 047131 573 TEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA---------------ELSSAVYDQLWRFDYEALPKDL 637 (889)
Q Consensus 573 ~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~lAR~~LIn~---------------elss~~Y~~~w~f~~~~lP~DL 637 (889)
+|||||||+||||++|||||||.||||+||+||++||++|||+ ||++++|++.|+|++++||+||
T Consensus 584 ~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL 663 (918)
T PLN02305 584 MEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADL 663 (918)
T ss_pred HHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeeeccchhHHHHHHHHHHhcCcCccccCHHHH
Confidence 9999999999999999999999999999999999999999998 8999999988999999999999
Q ss_pred HhcCCCCCCCCCCCCcccccCCCCCchhhHHHHHHHHHhhhhc-cc---CcccccCCHHHHHHHHHHHhccCCCCCCCCC
Q 047131 638 IKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTDS-NH---DQSLVQSDKELQAWWTEIRTVGHADKKDEPW 713 (889)
Q Consensus 638 ~~RG~~~~D~~~~~glkl~i~dYpYadDGL~iW~AI~~~V~~y-~~---~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~ 713 (889)
++|||+++|+++|||++|.|||||||+|||+||+||++||++| ++ +|++|++|.||||||+||+++||+|+++.+|
T Consensus 664 ~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~ 743 (918)
T PLN02305 664 IRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPW 743 (918)
T ss_pred HHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999 76 9999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhhhhhccccccccccccccccccccCCCcccccCCCCCCCCCChhhHHHhhcChHHHHhhcCCCHH
Q 047131 714 WPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQL 793 (889)
Q Consensus 714 ~P~l~T~~~Li~~lT~iIw~aSa~HAAVNfgQy~y~g~vPN~P~~~r~p~P~~~~~g~~e~~~~~~~pe~~~L~~LP~~~ 793 (889)
||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||++||+++ ++++++|+.+||+++|++||++.
T Consensus 744 ~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~P~~~---~~~~~~l~~~pe~~~L~tLP~~~ 820 (918)
T PLN02305 744 WPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQEN---DPDYEKFIRNPQYTFLSSLPTQL 820 (918)
T ss_pred CcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCCCC---CchHHHhhhChHHHHHHHCCcHH
Confidence 999999999999999999999999999999999999999999999999999887 68899999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCCccccCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCcccCceeec
Q 047131 794 QAIQVMAVLDVLSTHSPDEEYLGNQMEP--TWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLK 871 (889)
Q Consensus 794 qa~~~m~~~~~LS~~~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~~L~eie~~I~~RN~~~~lknr~g~~~~PY~~L~ 871 (889)
||+.+|+++++||+|++||+|||++.++ .|+.|+++++||++|+++|++||++|++||++++||||+||+++||+||+
T Consensus 821 qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~ 900 (918)
T PLN02305 821 QATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLL 900 (918)
T ss_pred HHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccC
Confidence 9999999999999999999999999886 69999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccCCCCccccC
Q 047131 872 PFSGRGVTEKGVPYSISI 889 (889)
Q Consensus 872 Pss~~g~t~~gIPnSIsI 889 (889)
|+++||||||||||||||
T Consensus 901 P~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 901 PTSGPGVTGRGIPNSISI 918 (918)
T ss_pred CCCCCCCCcCCCCCcccC
Confidence 999999999999999998
|
|
| >PLN02264 lipoxygenase | Back alignment and domain information |
|---|
| >PLN02337 lipoxygenase | Back alignment and domain information |
|---|
| >PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain | Back alignment and domain information |
|---|
| >cd02899 PLAT_SR Scavenger receptor protein | Back alignment and domain information |
|---|
| >cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function | Back alignment and domain information |
|---|
| >cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase | Back alignment and domain information |
|---|
| >cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins | Back alignment and domain information |
|---|
| >cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family | Back alignment and domain information |
|---|
| >cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 889 | ||||
| 2iuj_A | 853 | Crystal Structure Of Soybean Lipoxygenase-B Length | 1e-157 | ||
| 2iuk_A | 864 | Crystal Structure Of Soybean Lipoxygenase-D Length | 1e-157 | ||
| 1ik3_A | 857 | Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope | 1e-156 | ||
| 3bnb_A | 839 | Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | 1e-156 | ||
| 3pzw_A | 839 | Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | 1e-156 | ||
| 3bnd_A | 839 | Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | 1e-155 | ||
| 2sbl_B | 839 | The Three-Dimensional Structure Of An Arachidonic A | 1e-155 | ||
| 3bne_A | 839 | Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | 1e-155 | ||
| 3bnc_A | 839 | Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | 1e-155 | ||
| 1fgr_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng | 1e-155 | ||
| 1fgq_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng | 1e-155 | ||
| 1fgm_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng | 1e-155 | ||
| 1fgt_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng | 1e-155 | ||
| 1y4k_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng | 1e-155 | ||
| 1fgo_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng | 1e-155 | ||
| 1rov_A | 857 | Lipoxygenase-3 Treated With Cumene Hydroperoxide Le | 1e-154 | ||
| 3vf1_A | 698 | Structure Of A Calcium-Dependent 11r-Lipoxygenase S | 3e-37 | ||
| 3fg1_A | 696 | Crystal Structure Of Delta413-417:gs Lox Length = 6 | 2e-35 | ||
| 3dy5_A | 1066 | Allene Oxide Synthase 8r-Lipoxygenase From Plexaura | 2e-35 | ||
| 2fnq_A | 699 | Insights From The X-Ray Crystal Structure Of Coral | 5e-35 | ||
| 3fg4_A | 696 | Crystal Structure Of Delta413-417:gs I805a Lox Leng | 9e-35 | ||
| 3fg3_A | 696 | Crystal Structure Of Delta413-417:gs I805w Lox Leng | 1e-34 | ||
| 3o8y_A | 691 | Stable-5-Lipoxygenase Length = 691 | 4e-34 | ||
| 3v92_B | 691 | S663a Stable-5-Lox Length = 691 | 5e-34 | ||
| 3v98_A | 691 | S663d Stable-5-Lox Length = 691 | 5e-34 | ||
| 3d3l_A | 541 | The 2.6 A Crystal Structure Of The Lipoxygenase Dom | 3e-28 | ||
| 3rde_A | 573 | Crystal Structure Of The Catalytic Domain Of Porcin | 3e-28 | ||
| 1lox_A | 662 | Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | 4e-26 | ||
| 2p0m_A | 662 | Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy | 4e-26 |
| >pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 | Back alignment and structure |
|
| >pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 | Back alignment and structure |
| >pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 | Back alignment and structure |
| >pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | Back alignment and structure |
| >pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | Back alignment and structure |
| >pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | Back alignment and structure |
| >pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 | Back alignment and structure |
| >pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | Back alignment and structure |
| >pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 | Back alignment and structure |
| >pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 | Back alignment and structure |
| >pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 | Back alignment and structure |
| >pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 | Back alignment and structure |
| >pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 | Back alignment and structure |
| >pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 | Back alignment and structure |
| >pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 | Back alignment and structure |
| >pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 | Back alignment and structure |
| >pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 | Back alignment and structure |
| >pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 | Back alignment and structure |
| >pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 | Back alignment and structure |
| >pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 | Back alignment and structure |
| >pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | Back alignment and structure |
| >pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 | Back alignment and structure |
|---|
Score = 730 bits (1885), Expect = 0.0
Identities = 326/893 (36%), Positives = 468/893 (52%), Gaps = 96/893 (10%)
Query: 35 SVKVKAVVTVKRTILGGTRSNNR--EDVTYFE-KPLFLGLVCAEL-DSNGSEKPTINVYA 90
K+K V + + +++ F + + L L+ A D++G K + +
Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFL 64
Query: 91 -----SVAGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMN 144
S+ + + FE S G G +++ Q E +LK + L+ + G +
Sbjct: 65 EGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIR 124
Query: 145 ITCDSWVQPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIY 204
C+SWV + R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIY
Sbjct: 125 FVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIY 184
Query: 205 DYDVYNDLGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLIN 264
DYDVYNDLG+PD + +L +LG + + + P
Sbjct: 185 DYDVYNDLGNPDKSEKLA--------RPVLGGSSTFPYPRRGRTGRGPTV---------- 226
Query: 265 LYYCTDPESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGENKD-LG 323
TDP +E + + YVPRDE +K SL + PA ++AF +
Sbjct: 227 ----TDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIE 282
Query: 324 FPYFTAIDTLFNQGIALPPQEQEE-FWGRNLPELIQL-AKHILKF---ATMERHQFFWFR 378
F F + L+ GI LP + EL + +HILKF ++ Q W
Sbjct: 283 FHSFQDVHDLYEGGIKLPRDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMT 342
Query: 379 DEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAI 438
DEEF R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ T+ EA+
Sbjct: 343 DEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD---LDGYTMDEAL 399
Query: 439 EQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNGQ- 497
++LF+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 400 GSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDL 459
Query: 498 -PQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKD 556
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 460 SAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------- 500
Query: 557 YLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA- 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 ----------LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINAN 550
Query: 616 --------------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYP 661
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYP
Sbjct: 551 GIIETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYP 609
Query: 662 YANDGLNLWFALKKWVTD----SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPAL 717
YA DGL +W A+K WV + V++D ELQ WW E GH D KD+PWWP L
Sbjct: 610 YAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKL 669
Query: 718 KTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFF 777
+T EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + + +
Sbjct: 670 QTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGT---PEYEEM 726
Query: 778 LENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFS 837
+ N + LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F
Sbjct: 727 INNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFG 786
Query: 838 GRMMELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
++ E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 787 NKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
|
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 | Back alignment and structure |
|---|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 889 | |||
| 2iuk_A | 864 | SEED lipoxygenase; iron, dioxygenase, metal-bindin | 100.0 | |
| 1f8n_A | 839 | Lipoxygenase-1; dioxygenase, metalloprotein, fatty | 100.0 | |
| 2iuj_A | 853 | Lipoxygenase L-5; dioxygenase, metal-binding, oxid | 100.0 | |
| 1lox_A | 662 | 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot | 100.0 | |
| 3v98_A | 691 | Arachidonate 5-lipoxygenase; dioxygenase, oxidored | 100.0 | |
| 3fg1_A | 696 | Allene oxide synthase-lipoxygenase protein; arichi | 100.0 | |
| 3vf1_A | 698 | 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik | 100.0 | |
| 3dy5_A | 1066 | Allene oxide synthase-lipoxygenase protein; fusion | 100.0 | |
| 3rde_A | 573 | Arachidonate 12-lipoxygenase, 12S-type; C-terminal | 100.0 | |
| 3d3l_A | 541 | Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir | 100.0 | |
| 2wxu_A | 370 | Phospholipase C; cytolysis, hydrolase, hemolysis, | 97.37 | |
| 1olp_A | 370 | Alpha-toxin; zinc phospholipase C, GAS gangrene de | 97.35 | |
| 3cwz_B | 384 | RAB6IP1, RAB6-interacting protein 1; RAB small GTP | 95.17 |
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-241 Score=2090.08 Aligned_cols=790 Identities=42% Similarity=0.745 Sum_probs=748.9
Q ss_pred ceeEEEEEEEEEeecccCCCC-------------------------CCCccc-ccCCCcEEEEEEeceec-cCCCc----
Q 047131 34 VSVKVKAVVTVKRTILGGTRS-------------------------NNREDV-TYFEKPLFLGLVCAELD-SNGSE---- 82 (889)
Q Consensus 34 ~~~~~~~~v~~~~~~~~~~~~-------------------------~~~d~~-~~~gk~v~l~LvS~~~d-~~g~~---- 82 (889)
+..+|||+||||+|+++++++ +.+|++ |++|++|+|||||+++| +||+|
T Consensus 7 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~ 86 (864)
T 2iuk_A 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGK 86 (864)
T ss_dssp -CCCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEE
T ss_pred CCCEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccCCCCCCCcCCC
Confidence 456799999999999887543 457999 99999999999999999 78988
Q ss_pred cccccccccccc-CCCcceEEEEEEeccCCCCCeeEEEEEecCCCceEEEEEEEcccCC-CceEEeeccCcccCCCCCcc
Q 047131 83 KPTINVYASVAG-VDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWVQPLAIDAQK 160 (889)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~~~y~v~F~v~~~fG~pgai~V~n~~~~e~fl~~i~l~~~p~-g~i~F~cnsWV~~~~~~~~~ 160 (889)
++.|++|+.+.. .++++++|+|+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||.++|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~ 166 (864)
T 2iuk_A 87 EVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKN 166 (864)
T ss_dssp EEECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSC
T ss_pred cccccccccCCCcCCCCcEEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCCCC
Confidence 499999995443 3778999999999999999999999999999999999999999996 89999999999999999999
Q ss_pred eEEeeccccCCCCCChhhHHHHHHHHHHHhCCCCCCcCCCCceeecccccCCCCCCCCCcchhhhhhhhccccccc-cch
Q 047131 161 RVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPELHDLCLVAKSTLILGV-AEQ 239 (889)
Q Consensus 161 rvFf~nk~yLP~~tP~~l~~lR~~EL~~lRG~g~g~r~~~dRiYdyd~ynDlg~pd~~~~~~r~~~~~~~~pvlGg-~~~ 239 (889)
||||+||+|||++||+||++|||+||++|||||+||||+|||||||||||||||||++++ | ||||| ++
T Consensus 167 RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--r--------pvlggs~~- 235 (864)
T 2iuk_A 167 RIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--R--------PILGGCSI- 235 (864)
T ss_dssp EEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--C--------CCBSSSSS-
T ss_pred ceeccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--C--------cccCCCCC-
Confidence 999999999999999999999999999999999999999999999999999999999988 9 99999 77
Q ss_pred hhhhhhhhhccCcccCC--CCCCcccCccccCCCCCCCCCCCCccCCCCccChhhhcchhhhhHHHHHhhhHHHHHHhhc
Q 047131 240 DALTVQQKIWLEPYKLE--EHLPDLINLYYCTDPESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG 317 (889)
Q Consensus 240 ~~~~~~~~~~~~pyprr--tgr~~~~~~~~~~d~~~e~r~~~~yvPrDe~Fs~~K~~~f~~~~l~~~~~~~~p~l~~~~~ 317 (889)
+||||| ||||| +++||.+|+|.. +||||||+|++.|+++|.+++++|+++.++|+|+++++
T Consensus 236 -----------~pyPrR~rtgr~~-----~~~dp~~e~~~~-~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~ 298 (864)
T 2iuk_A 236 -----------YPYPLRVRTGRER-----TRTDPNSEKPGE-VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIF 298 (864)
T ss_dssp -----------SCCCCEECCCCCB-----CSSCTTSBCCCC-CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHH
T ss_pred -----------CCCCccccCCCCC-----CCCCCCcccccc-CCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999 99999 999999999965 99999999999999999999999999999999999884
Q ss_pred --CCCCCCCCCHHHHHHHhccCCCCCCchhhhhhccchh--HHHHh----hhhhccccc---cccccccccccHHHHHHh
Q 047131 318 --ENKDLGFPYFTAIDTLFNQGIALPPQEQEEFWGRNLP--ELIQL----AKHILKFAT---MERHQFFWFRDEEFGRQT 386 (889)
Q Consensus 318 --~~~~~~f~~f~di~~ly~~g~~~~~~~~~~~~~~~~p--~~~~~----~e~~lkf~~---~~~~~~~W~~DeeFgrQ~ 386 (889)
+.+..+|++|+||++||++|+++|. +.+++.+| .++++ +|+++|||+ ++.++++|++|+|||||+
T Consensus 299 ~~~~~~~~f~sf~di~~ly~~g~~l~~----~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~ 374 (864)
T 2iuk_A 299 QLRVTSSEFESFEDVRSLYEGGIKLPT----DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREV 374 (864)
T ss_dssp SSCSSCSSCCSHHHHHTTTSSCEECCH----HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHH
T ss_pred ccccCcCCCCCHHHHHHHHhccccCch----hhhcccCcHHHHHHHhhccccchhcCCCcceecccchhhhchHHHHHHH
Confidence 2146799999999999999999886 23344333 33333 689999999 888999999999999999
Q ss_pred hcCCCccchhcccCCCCCCCCCCCCCCCCCCCCcHHHHHhhcCCcccHHHHHhcCceEEecccccccchhhccccCCCcc
Q 047131 387 LAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTT 466 (889)
Q Consensus 387 LaG~NP~~I~r~~~~P~~s~ldp~~yg~~~s~It~e~i~~~l~g~~tl~eal~~grLFi~Dy~d~~lp~v~~in~~~g~~ 466 (889)
|||+||++|++|++||++|+|||++||+++|+||++||+..++| +||++||++|||||+||||++|||+.++|.++|++
T Consensus 375 LaG~NP~~I~r~~e~P~~s~ldp~~yg~~~s~it~e~i~~~l~g-~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~ 453 (864)
T 2iuk_A 375 IAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAK 453 (864)
T ss_dssp HHSSSCSCCEECSSSSCCCCSCHHHHCCCCCCCCHHHHGGGTTT-CCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCC
T ss_pred hcCCCchhhhhhhccCCcccCChhhcCCcccccCHHHHhhccCC-CcHHHHHhcCCEEEecchhhhccchhhcccCCCce
Confidence 99999999999999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred cccceeEeeecCCCceeeEEEEeeCCCCCCCC--CCceeecCCCCCCCchHHHHHHHHHHhhcccceeehhhhhhHHHHH
Q 047131 467 LYRSRTLFFLTSEGTLRPLVIELTRPPMNGQP--QWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQ 544 (889)
Q Consensus 467 ~YA~~~Lffl~~dG~L~PlAIqL~~pp~~~~~--~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HQlvsHl~~~~~~~ 544 (889)
+|||+||||++++|+|+||||||++|++++++ ++++||||+|+++++|.|+|||+||++||++|||+|+||
T Consensus 454 ~YAp~~Lffl~~dG~L~PlAIqLs~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHl------- 526 (864)
T 2iuk_A 454 AYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHW------- 526 (864)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEEEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCC-------
T ss_pred eecceEEEEEcCCCCEeEEEEEeeCCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhh-------
Confidence 99999999999999999999999998765543 679999999877778999999999999999999999999
Q ss_pred HHHHHhhccccccccccccccccccccchhhHHHHhcccCCCcCchhhccchhhhhhccchHHHHhhccCH---------
Q 047131 545 FFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA--------- 615 (889)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~lrTHlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~lAR~~LIn~--------- 615 (889)
|+||+++|||+|||+||||.+|||||||.||||+||+||++||+.|||+
T Consensus 527 ----------------------l~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiie~~~~ 584 (864)
T 2iuk_A 527 ----------------------LNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFL 584 (864)
T ss_dssp ----------------------CTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHST
T ss_pred ----------------------hhhhHHHHHHHHHHhccCCccCchHHhhHHHHHHHHHHHHHHHHhccCCCCceeeecc
Confidence 9999999999999999999999999999999999999999999999998
Q ss_pred ------HHHHHHHcccccCCcCCCchHHHhcCCCCCCCCCCCCcccccCCCCCchhhHHHHHHHHHhhhhc-cc---Ccc
Q 047131 616 ------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTDS-NH---DQS 685 (889)
Q Consensus 616 ------elss~~Y~~~w~f~~~~lP~DL~~RG~~~~D~~~~~glkl~i~dYpYadDGL~iW~AI~~~V~~y-~~---~D~ 685 (889)
||++++|++ |+|++++||+||++|||+++|+++|||+||.|||||||+|||+||+||++||++| ++ +|+
T Consensus 585 ~G~~~~elss~ayk~-w~f~~~~LP~DL~~RGva~~D~~~p~gl~l~ipdYpYadDGL~iW~AIk~~V~~yV~~YY~sD~ 663 (864)
T 2iuk_A 585 PGKYSIEMSSSVYKN-WVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDA 663 (864)
T ss_dssp TGGGHHHHHHHHHTT-CCGGGSSHHHHHHHTTSEEECSSSTTSEEESSSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHH
T ss_pred CchhHHHHHHHHHcc-CCCccccCcHHHHhcCCCCCCccccccccccCCCCCccccHHHHHHHHHHHHHHHHHHHcCCch
Confidence 799999997 9999999999999999999999999999999999999999999999999999999 76 999
Q ss_pred cccCCHHHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhhhhccccccccccccccccccccCCCcccccCCCCC
Q 047131 686 LVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPT 765 (889)
Q Consensus 686 ~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Li~~lT~iIw~aSa~HAAVNfgQy~y~g~vPN~P~~~r~p~P~ 765 (889)
+|++|.||||||+||+++||+|+++++|||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||+
T Consensus 664 ~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~r~p~P~ 743 (864)
T 2iuk_A 664 AVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPA 743 (864)
T ss_dssp HHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHTSTTTSCCCCCSCCCC
T ss_pred hhcCCHHHHHHHHHHHhcCCCCCCCCCCCCCcCCHHHHHHHhheeeecccchhhhhccccchhhcccCCCChhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCCCChhhHHHhhcChHHHHhhcCCCHHHHHHHHHHHHHhhCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 047131 766 EEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEG 845 (889)
Q Consensus 766 ~~~~g~~e~~~~~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~eie~ 845 (889)
+ |+.+|++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|+++.|++|+++++|+++|+++|++||+
T Consensus 744 ~---G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~ 820 (864)
T 2iuk_A 744 E---GTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEG 820 (864)
T ss_dssp T---TSHHHHHHHHCHHHHHHTTSCCHHHHHHHHHHHHHHTCCCSSCCBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHH
T ss_pred C---CchhHhhhhhChHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCcccccccCccccccCHHHHHHHHHHHHHHHHHHH
Confidence 4 4889999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred HHHHhcccccccccCCCcccCceeeccCCCCCCccCCCCccccC
Q 047131 846 IIDERNADMKLKNRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889 (889)
Q Consensus 846 ~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 889 (889)
+|++||++++||||+|++++||+||+|+|++|||||||||||||
T Consensus 821 ~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g~t~~~IPNSIsI 864 (864)
T 2iuk_A 821 KINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864 (864)
T ss_dssp HHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSSSCSCCCBSSCCC
T ss_pred HHHHHhcCchhhccCCCCCCCceeeCCCCCCCcccCCCCCcccC
Confidence 99999999999999999999999999999999999999999998
|
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... | Back alignment and structure |
|---|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A | Back alignment and structure |
|---|
| >1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 | Back alignment and structure |
|---|
| >3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 889 | ||||
| d3bnea1 | 690 | a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom | 0.0 | |
| d2p0ma1 | 551 | a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory | 1e-156 | |
| d3bnea2 | 143 | b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl | 4e-26 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Score = 740 bits (1913), Expect = 0.0
Identities = 296/756 (39%), Positives = 411/756 (54%), Gaps = 102/756 (13%)
Query: 170 LPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPELHDLCLVAK 229
+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYNDLG+PD + +L
Sbjct: 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKL-------- 52
Query: 230 STLILGVAEQDALTVQQKIWLEPY--------KLEEHLPDLINLYYCTDPESETRSDSNY 281
+ +LG + PY TDP +E + + Y
Sbjct: 53 ARPVLGGSST-----------FPYPRRGRTGRGPTV-----------TDPNTEKQGEVFY 90
Query: 282 VPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAIDTLFNQGIAL 340
VPRDE +K SL + PA ++AF ++ + F F + L+ GI L
Sbjct: 91 VPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL 150
Query: 341 PPQEQEE-FWGRNLPELIQL-AKHILKFAT---MERHQFFWFRDEEFGRQTLAGLNPCAI 395
P + EL + +HILKF ++ Q W DEEF R+ +AG+NPC I
Sbjct: 151 PRDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVI 210
Query: 396 QLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLLLPY 455
+ + ++P +S LDPAIYG S IT + ++ T+ EA+ ++LF+LDY+D+ +PY
Sbjct: 211 RGLEEFPPKSNLDPAIYGDQSSKITADSLD---LDGYTMDEALGSRRLFMLDYHDIFMPY 267
Query: 456 VEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNGQ--PQWKQAFQPSWQSTES 513
V ++ QL Y +RT+ FL +GTL+P+ IEL+ P G Q P+ + ES
Sbjct: 268 VRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVES 327
Query: 514 WLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACT 573
+W LAKA+V+ +DS YHQL+SHW L THA
Sbjct: 328 TIWLLAKAYVIVNDSCYHQLMSHW-----------------------------LNTHAAM 358
Query: 574 EPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA---------------ELS 618
EP+V AT RHLS +HPI LL PH R M N LAR+SLINA E+S
Sbjct: 359 EPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSVEMS 418
Query: 619 SAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVT 678
SAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DGL +W A+K WV
Sbjct: 419 SAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQ 477
Query: 679 D----SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDLIEIITTIVWVA 734
+ V++D ELQ WW E GH D KD+PWWP L+T EDL+E+ I+W+A
Sbjct: 478 EYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIA 537
Query: 735 SGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQ 794
S HAAVNFGQY Y G + NRP+ +R +P + + + + N + LR+ ++L
Sbjct: 538 SALHAAVNFGQYPYGGLIMNRPTASRRLLPEK---GTPEYEEMINNHEKAYLRTITSKLP 594
Query: 795 AIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADM 854
+ ++V+++LSTH+ DE YLG + P W D AF++F ++ E+E + RN D
Sbjct: 595 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 654
Query: 855 KLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 655 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 889 | |||
| d3bnea1 | 690 | Lipoxigenase, C-terminal domain {Soybean (Glycine | 100.0 | |
| d2p0ma1 | 551 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 100.0 | |
| d3bnea2 | 143 | Plant lipoxigenase {Soybean (Glycine max), isozyme | 100.0 | |
| d2p0ma2 | 111 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 97.01 | |
| d1olpa2 | 121 | Alpha-toxin, C-terminal domain {Clostridium absonu | 96.25 | |
| d1ca1a2 | 121 | Alpha-toxin, C-terminal domain {Clostridium perfri | 95.13 | |
| d1rp1a1 | 113 | Pancreatic lipase, C-terminal domain {Dog (Canis f | 89.75 | |
| d1bu8a1 | 114 | Pancreatic lipase, C-terminal domain {Rat (Rattus | 89.63 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Probab=100.00 E-value=7.4e-204 Score=1753.25 Aligned_cols=657 Identities=45% Similarity=0.816 Sum_probs=629.0
Q ss_pred CCCCCChhhHHHHHHHHHHHhCCCCCCcCCCCceeecccccCCCCCCCCCcchhhhhhhhccccccc-cchhhhhhhhhh
Q 047131 170 LPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPELHDLCLVAKSTLILGV-AEQDALTVQQKI 248 (889)
Q Consensus 170 LP~~tP~~l~~lR~~EL~~lRG~g~g~r~~~dRiYdyd~ynDlg~pd~~~~~~r~~~~~~~~pvlGg-~~~~~~~~~~~~ 248 (889)
||++||+||++|||+||++|||||+||||+|||||||||||||||||++++++| ||||| ++
T Consensus 1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~r--------p~lgg~~~---------- 62 (690)
T d3bnea1 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLAR--------PVLGGSST---------- 62 (690)
T ss_dssp CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCC--------CCBSSSSS----------
T ss_pred CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCC--------CCCCCCCC----------
Confidence 899999999999999999999999999999999999999999999999999999 99999 57
Q ss_pred ccCcccCC--CCCCcccCccccCCCCCCCCCCCCccCCCCccChhhhcchhhhhHHHHHhhhHHHHHHhhcC-CCCCCCC
Q 047131 249 WLEPYKLE--EHLPDLINLYYCTDPESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGE-NKDLGFP 325 (889)
Q Consensus 249 ~~~pyprr--tgr~~~~~~~~~~d~~~e~r~~~~yvPrDe~Fs~~K~~~f~~~~l~~~~~~~~p~l~~~~~~-~~~~~f~ 325 (889)
|||||| ||||| +++||.+|+|...+||||||+|+++|+++|.++++||++|.++|.|+++++. .+..+|+
T Consensus 63 --~pyprr~rtgr~~-----~~~dp~~e~r~~~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~ 135 (690)
T d3bnea1 63 --FPYPRRGRTGRGP-----TVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFH 135 (690)
T ss_dssp --SCCCCEECCCCCB-----CSSCTTSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCC
T ss_pred --CCCCCCCCCCCCC-----CCCCCCcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Confidence 999999 99999 9999999999999999999999999999999999999999999999998752 1567999
Q ss_pred CHHHHHHHhccCCCCCCchhhhhhccchhHHHHh----hhhhccccc---cccccccccccHHHHHHhhcCCCccchhcc
Q 047131 326 YFTAIDTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFAT---MERHQFFWFRDEEFGRQTLAGLNPCAIQLV 398 (889)
Q Consensus 326 ~f~di~~ly~~g~~~~~~~~~~~~~~~~p~~~~~----~e~~lkf~~---~~~~~~~W~~DeeFgrQ~LaG~NP~~I~r~ 398 (889)
+|+||++||++|+++|...... ...+|.++++ ++++||||+ |++++++|++|+|||||+|||+||++|+||
T Consensus 136 ~f~~i~~ly~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~ 213 (690)
T d3bnea1 136 SFQDVHDLYEGGIKLPRDVIST--IIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGL 213 (690)
T ss_dssp SHHHHHGGGTTCEECCHHHHHH--HTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEEC
T ss_pred CHHHHHHHHhccccCchhhhhh--cccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeec
Confidence 9999999999999988532111 1224456665 689999999 899999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcHHHHHhhcCCcccHHHHHhcCceEEecccccccchhhccccCCCcccccceeEeeecC
Q 047131 399 TKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTS 478 (889)
Q Consensus 399 ~~~P~~s~ldp~~yg~~~s~It~e~i~~~l~g~~tl~eal~~grLFi~Dy~d~~lp~v~~in~~~g~~~YA~~~Lffl~~ 478 (889)
++||++|+|||++||++.++||+++++ ++| +||++||++|||||+||||+++|++.++|...+++.|||+||||+++
T Consensus 214 ~e~P~~~~l~~~~~g~~~s~it~~~i~--l~G-~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~ 290 (690)
T d3bnea1 214 EEFPPKSNLDPAIYGDQSSKITADSLD--LDG-YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLRE 290 (690)
T ss_dssp CSSSCCCCSCHHHHCCCCCCCCGGGCC--CTT-CCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECT
T ss_pred cccCCcCCCCHHHhCchhhhhhHhhhc--cCc-cHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECC
Confidence 999999999999999999999999985 677 99999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEEeeCCCCCCC--CCCceeecCCCCCCCchHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHhhccccc
Q 047131 479 EGTLRPLVIELTRPPMNGQ--PQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKD 556 (889)
Q Consensus 479 dG~L~PlAIqL~~pp~~~~--~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HQlvsHl~~~~~~~~~~~~~~~~~~~ 556 (889)
+|+|+||||||++++..++ +++++||||+|+++++|.|+|||+||++||++|||+|+||
T Consensus 291 dG~L~PiAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHl------------------- 351 (690)
T d3bnea1 291 DGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------- 351 (690)
T ss_dssp TSCEEEEEEEEECCCCTTCCCCCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------------------
T ss_pred CCCcccEEEEecCCCCCcccCCCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhh-------------------
Confidence 9999999999999986553 6789999999977778999999999999999999999999
Q ss_pred cccccccccccccccchhhHHHHhcccCCCcCchhhccchhhhhhccchHHHHhhccCH---------------HHHHHH
Q 047131 557 YLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA---------------ELSSAV 621 (889)
Q Consensus 557 ~~~~~~~~~~lrTHlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~lAR~~LIn~---------------elss~~ 621 (889)
|+||+++|||||||+||||.+|||||||.||||+||+||++||++|||+ ||++++
T Consensus 352 ----------l~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~~~~~~el~~~a 421 (690)
T d3bnea1 352 ----------LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSVEMSSAV 421 (690)
T ss_dssp ----------CTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHH
T ss_pred ----------hhhhhHHHHHHHHHHhcCCccCCHHHhcchhhhhhHHHHHHHHHhccCCCCeeeecccCchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988 899999
Q ss_pred HcccccCCcCCCchHHHhcCCCCCCCCCCCCcccccCCCCCchhhHHHHHHHHHhhhhc-cc---CcccccCCHHHHHHH
Q 047131 622 YDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTDS-NH---DQSLVQSDKELQAWW 697 (889)
Q Consensus 622 Y~~~w~f~~~~lP~DL~~RG~~~~D~~~~~glkl~i~dYpYadDGL~iW~AI~~~V~~y-~~---~D~~V~~D~ELQaW~ 697 (889)
|++ |+|++++||+||++|||+++|+++|||+++.|||||||||||+||+||++||++| ++ +|++|++|.|||+||
T Consensus 422 yk~-w~f~~~~lP~dL~~RGv~~~d~~~p~g~~l~ipdYPYrdDgL~iW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~ 500 (690)
T d3bnea1 422 YKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWW 500 (690)
T ss_dssp HTT-CCGGGGSHHHHHHHTTSEEECTTSTTSEEESSSSCHHHHHHHHHHHHHHHHHHHHGGGTCSSHHHHHTCHHHHHHH
T ss_pred Hhc-CcccccCCHHHHHHcCCCcccccccccccccCCCCchhhhHHHHHHHHHHHHHHHhhhccCCccccccCHHHHHHH
Confidence 998 9999999999999999999999999999999999999999999999999999999 76 999999999999999
Q ss_pred HHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhhhhccccccccccccccccccccCCCcccccCCCCCCCCCChhhHHHh
Q 047131 698 TEIRTVGHADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFF 777 (889)
Q Consensus 698 ~Ei~~~Gh~d~kd~p~~P~l~T~~~Li~~lT~iIw~aSa~HAAVNfgQy~y~g~vPN~P~~~r~p~P~~~~~g~~e~~~~ 777 (889)
+||+++||+|+++.+|||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++||++||+++ +++++++
T Consensus 501 ~Ei~~~G~gd~kd~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gfvPN~P~~~r~~~P~~~---~~~~~~~ 577 (690)
T d3bnea1 501 KEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKG---TPEYEEM 577 (690)
T ss_dssp HHHHHTTTGGGTTCTTSCCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSTTTSCCCBCCCCCCTT---SHHHHHH
T ss_pred HHHhcccCCCCCCCCCCCCCCCHHHHHHHHHHHHhhccHHHhhhccccccccCcCCCCChHhcCCCCCCC---Chhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987 7889999
Q ss_pred hcChHHHHhhcCCCHHHHHHHHHHHHHhhCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 047131 778 LENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLK 857 (889)
Q Consensus 778 ~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~eie~~I~~RN~~~~lk 857 (889)
+.+|++++|++||++.||+.+|+++++||+|++||+|||+|+++.|++|+++++|+++|+++|++||++|++||+++++|
T Consensus 578 ~~~~e~~~L~tLP~~~qa~~~~~~~~~LS~~~~de~yLG~~~~~~~~~D~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~~ 657 (690)
T d3bnea1 578 INNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 657 (690)
T ss_dssp HHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred hhchHHHHHHhCCcHHHHHHHHHHHHHhccCCCCcccCCCCCCcccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred -ccCCCcccCceeeccCCCCCCccCCCCccccC
Q 047131 858 -NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889 (889)
Q Consensus 858 -nr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 889 (889)
||+|++++||+||+|++++|||||||||||||
T Consensus 658 ~nr~g~~~~PY~~L~Ps~~~g~t~~gIPnSIsI 690 (690)
T d3bnea1 658 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690 (690)
T ss_dssp HHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred cccCCCCCCCccccCCCCCCCcCcCCCCCcccC
Confidence 99999999999999999999999999999998
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} | Back information, alignment and structure |
|---|
| >d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} | Back information, alignment and structure |
|---|
| >d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|