Citrus Sinensis ID: 047135

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130----
MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKENAA
ccccccEEEcEEEEEEcccccccEEEEEEEEEccccEEccccccccEEEcccEEEccEEEEccccccHHHHHHHHHHHcHHHHHHHcHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccEEEEEEEEEEEEEcccccccEEEEEEEEcccEEEEccccccccEEcccEEEEEcEEEEcccccccHHHHHHHHHHcHHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLdqnralvdapdmvrgqmnfkrlsltdikidiprvpkkkTLIDAMEKADvknkwessswgRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKENAA
MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRAlvdapdmvrgqmnfkrlsltdikidiprvpkkktlidamekadvknkwessswgrklivqkkraslndfdrFKLMLAkikkgglvrqelaklkkenaa
MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKENAA
***KRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVR************
*PFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQE***LKK****
MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEK*********SSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKENAA
MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKEN**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKENAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query134 2.2.26 [Sep-21-2011]
Q9T043134 60S ribosomal protein L14 yes no 1.0 1.0 0.850 3e-59
Q9SIM4134 60S ribosomal protein L14 no no 1.0 1.0 0.835 1e-58
P55844133 Probable 60S ribosomal pr N/A no 0.992 1.0 0.796 3e-55
O46160152 60S ribosomal protein L14 N/A no 0.970 0.855 0.484 3e-28
P50914215 60S ribosomal protein L14 yes no 0.970 0.604 0.454 3e-27
Q9CR57217 60S ribosomal protein L14 yes no 0.970 0.599 0.454 3e-27
Q3T0U2214 60S ribosomal protein L14 yes no 0.970 0.607 0.462 6e-27
A1XQU3213 60S ribosomal protein L14 yes no 0.970 0.610 0.462 6e-27
Q63507214 60S ribosomal protein L14 yes no 0.970 0.607 0.446 8e-27
Q7XYA7133 60S ribosomal protein L14 N/A no 0.962 0.969 0.492 9e-27
>sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1 Back     alignment and function desciption
 Score =  226 bits (576), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 114/134 (85%), Positives = 124/134 (92%)

Query: 1   MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYG+++G+LVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGL 120
           DI RVPKKK LI+AMEKADVKNKWE SSWGRKLIVQK+RA+LNDFDRFK+MLAKIKK G+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKKENAA 134
           VRQELAKLKKE  A
Sbjct: 121 VRQELAKLKKEITA 134

Arabidopsis thaliana (taxid: 3702)
>sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1 Back     alignment and function description
>sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1 Back     alignment and function description
>sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1 Back     alignment and function description
>sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4 Back     alignment and function description
>sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3 Back     alignment and function description
>sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3 Back     alignment and function description
>sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1 Back     alignment and function description
>sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3 Back     alignment and function description
>sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query134
224102199134 predicted protein [Populus trichocarpa] 1.0 1.0 0.902 1e-63
118481719134 unknown [Populus trichocarpa] 1.0 1.0 0.895 2e-63
255575865134 60S ribosomal protein L14, putative [Ric 1.0 1.0 0.902 3e-63
296084563179 unnamed protein product [Vitis vinifera] 1.0 0.748 0.888 5e-63
225463041134 PREDICTED: 60S ribosomal protein L14-2-l 1.0 1.0 0.888 9e-63
296083677220 unnamed protein product [Vitis vinifera] 1.0 0.609 0.873 1e-62
224110594134 predicted protein [Populus trichocarpa] 1.0 1.0 0.880 2e-62
225433183134 PREDICTED: 60S ribosomal protein L14-2-l 1.0 1.0 0.873 4e-62
76161008134 glycoprotein-like protein [Solanum tuber 1.0 1.0 0.895 4e-62
255577936133 60S ribosomal protein L14, putative [Ric 0.992 1.0 0.887 5e-62
>gi|224102199|ref|XP_002312586.1| predicted protein [Populus trichocarpa] gi|222852406|gb|EEE89953.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 121/134 (90%), Positives = 130/134 (97%)

Query: 1   MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGKEYGRLVVIVDV+DQNRALVDAPDMVR QMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGL 120
           +I RVPKKK LI+AMEKADVKNKWE SSWGR+LIVQ++RA+LNDFDRFKLMLAKIK+GGL
Sbjct: 61  EINRVPKKKALIEAMEKADVKNKWEKSSWGRRLIVQQRRAALNDFDRFKLMLAKIKRGGL 120

Query: 121 VRQELAKLKKENAA 134
           +RQELAKLKKENAA
Sbjct: 121 IRQELAKLKKENAA 134

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118481719|gb|ABK92799.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255575865|ref|XP_002528830.1| 60S ribosomal protein L14, putative [Ricinus communis] gi|223531742|gb|EEF33564.1| 60S ribosomal protein L14, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296084563|emb|CBI25584.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225463041|ref|XP_002267370.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083677|emb|CBI23666.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224110594|ref|XP_002315570.1| predicted protein [Populus trichocarpa] gi|118484531|gb|ABK94140.1| unknown [Populus trichocarpa] gi|222864610|gb|EEF01741.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225433183|ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|76161008|gb|ABA40467.1| glycoprotein-like protein [Solanum tuberosum] Back     alignment and taxonomy information
>gi|255577936|ref|XP_002529840.1| 60S ribosomal protein L14, putative [Ricinus communis] gi|223530668|gb|EEF32541.1| 60S ribosomal protein L14, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query134
TAIR|locus:2136501134 AT4G27090 [Arabidopsis thalian 1.0 1.0 0.850 2.3e-55
TAIR|locus:2054764134 AT2G20450 [Arabidopsis thalian 1.0 1.0 0.835 9.9e-55
ZFIN|ZDB-GENE-030131-2085139 rpl14 "ribosomal protein L14" 0.992 0.956 0.488 2.7e-29
MGI|MGI:1914365217 Rpl14 "ribosomal protein L14" 0.970 0.599 0.454 1.7e-27
UNIPROTKB|F1NTC7145 RPL14 "Uncharacterized protein 0.962 0.889 0.450 3.5e-27
UNIPROTKB|P50914215 RPL14 "60S ribosomal protein L 0.970 0.604 0.454 3.5e-27
UNIPROTKB|A1XQU3213 RPL14 "60S ribosomal protein L 0.970 0.610 0.462 3.5e-27
UNIPROTKB|G8JKV5213 RPL14 "60S ribosomal protein L 0.970 0.610 0.462 4.5e-27
UNIPROTKB|Q3T0U2214 RPL14 "60S ribosomal protein L 0.970 0.607 0.462 4.5e-27
RGD|621180214 Rpl14 "ribosomal protein L14" 0.970 0.607 0.446 4.5e-27
TAIR|locus:2136501 AT4G27090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 114/134 (85%), Positives = 124/134 (92%)

Query:     1 MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKI 60
             M FKRYVEIGRVALVNYG+++G+LVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct:     1 MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query:    61 DIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGL 120
             DI RVPKKK LI+AMEKADVKNKWE SSWGRKLIVQK+RA+LNDFDRFK+MLAKIKK G+
Sbjct:    61 DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query:   121 VRQELAKLKKENAA 134
             VRQELAKLKKE  A
Sbjct:   121 VRQELAKLKKEITA 134
GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS
GO:0005622 "intracellular" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005840 "ribosome" evidence=IEA;ISS
GO:0006412 "translation" evidence=IEA;ISS
GO:0042254 "ribosome biogenesis" evidence=ISS
GO:0009507 "chloroplast" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0022626 "cytosolic ribosome" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=RCA
GO:0001510 "RNA methylation" evidence=RCA
TAIR|locus:2054764 AT2G20450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-2085 rpl14 "ribosomal protein L14" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1914365 Rpl14 "ribosomal protein L14" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NTC7 RPL14 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P50914 RPL14 "60S ribosomal protein L14" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A1XQU3 RPL14 "60S ribosomal protein L14" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|G8JKV5 RPL14 "60S ribosomal protein L14" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q3T0U2 RPL14 "60S ribosomal protein L14" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|621180 Rpl14 "ribosomal protein L14" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O94238RL14_SCHPONo assigned EC number0.45040.81340.8134yesno
P38754RL14B_YEASTNo assigned EC number0.360.91790.8913yesno
P36105RL14A_YEASTNo assigned EC number0.360.91790.8913yesno
P55844RL14_PEANo assigned EC number0.79690.99251.0N/Ano
P55841RL14_DROMENo assigned EC number0.41911.00.8072yesno
Q9T043RL142_ARATHNo assigned EC number0.85071.01.0yesno
Q54Z09RL14_DICDINo assigned EC number0.40620.94020.8025yesno
Q9SIM4RL141_ARATHNo assigned EC number0.83581.01.0nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query134
PTZ00065130 PTZ00065, PTZ00065, 60S ribosomal protein L14; Pro 4e-32
pfam0192973 pfam01929, Ribosomal_L14e, Ribosomal protein L14 3e-29
cd0608876 cd06088, KOW_RPL14, KOW motif of Ribosomal Protein 2e-19
COG2163125 COG2163, RPL14A, Ribosomal protein L14E/L6E/L27E [ 4e-13
PRK0433384 PRK04333, PRK04333, 50S ribosomal protein L14e; Va 2e-10
>gnl|CDD|240252 PTZ00065, PTZ00065, 60S ribosomal protein L14; Provisional Back     alignment and domain information 
 Score =  110 bits (276), Expect = 4e-32
 Identities = 52/127 (40%), Positives = 80/127 (62%), Gaps = 3/127 (2%)

Query: 3   FKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMV---RGQMNFKRLSLTDIK 59
           FKR+VE GR+ L+ YG + G+L  IVD++   R LVD   +    R  +  KRL LTD K
Sbjct: 4   FKRFVEPGRLCLIQYGPDAGKLCFIVDIVTPTRVLVDGAFITGVKRQSIPLKRLKLTDEK 63

Query: 60  IDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGG 119
           I I R  +  TL  A++K +   ++  +S G+KLI+++KRA++ DF+RFKLM+AK ++  
Sbjct: 64  IKINRGARTGTLKKALKKDNALEEFNKTSLGKKLIIKEKRANMTDFERFKLMVAKKERRK 123

Query: 120 LVRQELA 126
           L++    
Sbjct: 124 LMKSLKK 130

Length = 130
>gnl|CDD|190164 pfam01929, Ribosomal_L14e, Ribosomal protein L14 Back     alignment and domain information
>gnl|CDD|240512 cd06088, KOW_RPL14, KOW motif of Ribosomal Protein L14 Back     alignment and domain information
>gnl|CDD|225074 COG2163, RPL14A, Ribosomal protein L14E/L6E/L27E [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235283 PRK04333, PRK04333, 50S ribosomal protein L14e; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 134
PTZ00065130 60S ribosomal protein L14; Provisional 100.0
KOG3421136 consensus 60S ribosomal protein L14 [Translation, 100.0
PF0192977 Ribosomal_L14e: Ribosomal protein L14; InterPro: I 99.98
COG2163125 RPL14A Ribosomal protein L14E/L6E/L27E [Translatio 99.95
PRK0433384 50S ribosomal protein L14e; Validated 99.94
PTZ00471134 60S ribosomal protein L27; Provisional 99.5
KOG3418136 consensus 60S ribosomal protein L27 [Translation, 99.02
PF0046732 KOW: KOW motif; InterPro: IPR005824 Ribosomes are 97.86
smart0073928 KOW KOW (Kyprides, Ouzounis, Woese) motif. Motif i 96.56
PRK01191120 rpl24p 50S ribosomal protein L24P; Validated 96.15
PRK1228176 rplX 50S ribosomal protein L24; Reviewed 95.99
CHL0014183 rpl24 ribosomal protein L24; Validated 95.89
TIGR01079104 rplX_bact ribosomal protein L24, bacterial/organel 95.02
TIGR01080114 rplX_A_E ribosomal protein L24p/L26e, archaeal/euk 94.74
PRK00004105 rplX 50S ribosomal protein L24; Reviewed 94.58
PTZ00194143 60S ribosomal protein L26; Provisional 94.05
COG0198104 RplX Ribosomal protein L24 [Translation, ribosomal 91.11
TIGR01955159 RfaH transcriptional activator RfaH. This model re 90.92
PRK05609181 nusG transcription antitermination protein NusG; V 90.45
TIGR00922172 nusG transcription termination/antitermination fac 89.78
TIGR00405145 L26e_arch ribosomal protein L24p/L26e, archaeal. T 89.77
PF13234268 rRNA_proc-arch: rRNA-processing arch domain; PDB: 89.7
PRK09014162 rfaH transcriptional activator RfaH; Provisional 89.49
PRK08559153 nusG transcription antitermination protein NusG; V 87.27
KOG1708236 consensus Mitochondrial/chloroplast ribosomal prot 84.96
PF0177785 Ribosomal_L27e: Ribosomal L27e protein family; Int 80.51
>PTZ00065 60S ribosomal protein L14; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.7e-58  Score=344.64  Aligned_cols=125  Identities=42%  Similarity=0.691  Sum_probs=122.7

Q ss_pred             CCcccceecCeEEEEccccCCCcEEEEEEeecCCeEEEeCC---CCcceeeeccCeeeeceEEecCCCCChHHHHHHHHH
Q 047135            1 MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAP---DMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEK   77 (134)
Q Consensus         1 m~f~r~veiGrVV~i~~G~~~Gk~~VIVdiiD~~rvLVDGp---~v~Rk~~n~khl~lT~~~i~i~~~~~~~~v~ka~e~   77 (134)
                      |+|+|||||||||++++||++||+||||||||+||||||||   +|+||.+|++||+||+++++||+|+++++|++||++
T Consensus         2 ~~f~rfVEiGRVvli~~Gp~~GKL~vIVDIID~nRvLVDGP~~tgV~Rq~i~~k~l~LT~~~v~i~r~a~t~~v~ka~~~   81 (130)
T PTZ00065          2 PLFKRFVEPGRLCLIQYGPDAGKLCFIVDIVTPTRVLVDGAFITGVKRQSIPLKRLKLTDEKIKINRGARTGTLKKALKK   81 (130)
T ss_pred             cccccceeeceEEEEecCCCCCCEEEEEEEEcCCeEEEeCCCcCCcceeEEeccceEEccEEEecCCCCCcHHHHHHHHH
Confidence            57899999999999999999999999999999999999999   899999999999999999999999999999999999


Q ss_pred             hchHHHhhhchhHhhHHHHHHHhcCCChhhHHHHHHHHHHhhHHHHHH
Q 047135           78 ADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQEL  125 (134)
Q Consensus        78 ~~v~~kw~~s~waKk~~~~~~r~~ltDFdRFk~~~~kk~r~~~~~~~~  125 (134)
                      +++.+||++|+||||++++++|++||||||||+|++|++||.+++.+.
T Consensus        82 a~i~~kw~~s~waKK~~~~~~Ra~ltDFdRFKvm~akk~r~~~v~~~~  129 (130)
T PTZ00065         82 DNALEEFNKTSLGKKLIIKEKRANMTDFERFKLMVAKKERRKLMKSLK  129 (130)
T ss_pred             ccHHHHHHHhHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999865

>KOG3421 consensus 60S ribosomal protein L14 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01929 Ribosomal_L14e: Ribosomal protein L14; InterPro: IPR002784 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>COG2163 RPL14A Ribosomal protein L14E/L6E/L27E [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK04333 50S ribosomal protein L14e; Validated Back     alignment and domain information
>PTZ00471 60S ribosomal protein L27; Provisional Back     alignment and domain information
>KOG3418 consensus 60S ribosomal protein L27 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00467 KOW: KOW motif; InterPro: IPR005824 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>smart00739 KOW KOW (Kyprides, Ouzounis, Woese) motif Back     alignment and domain information
>PRK01191 rpl24p 50S ribosomal protein L24P; Validated Back     alignment and domain information
>PRK12281 rplX 50S ribosomal protein L24; Reviewed Back     alignment and domain information
>CHL00141 rpl24 ribosomal protein L24; Validated Back     alignment and domain information
>TIGR01079 rplX_bact ribosomal protein L24, bacterial/organelle Back     alignment and domain information
>TIGR01080 rplX_A_E ribosomal protein L24p/L26e, archaeal/eukaryotic Back     alignment and domain information
>PRK00004 rplX 50S ribosomal protein L24; Reviewed Back     alignment and domain information
>PTZ00194 60S ribosomal protein L26; Provisional Back     alignment and domain information
>COG0198 RplX Ribosomal protein L24 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR01955 RfaH transcriptional activator RfaH Back     alignment and domain information
>PRK05609 nusG transcription antitermination protein NusG; Validated Back     alignment and domain information
>TIGR00922 nusG transcription termination/antitermination factor NusG Back     alignment and domain information
>TIGR00405 L26e_arch ribosomal protein L24p/L26e, archaeal Back     alignment and domain information
>PF13234 rRNA_proc-arch: rRNA-processing arch domain; PDB: 4A4K_E 4A4Z_A 2XGJ_B 3L9O_A Back     alignment and domain information
>PRK09014 rfaH transcriptional activator RfaH; Provisional Back     alignment and domain information
>PRK08559 nusG transcription antitermination protein NusG; Validated Back     alignment and domain information
>KOG1708 consensus Mitochondrial/chloroplast ribosomal protein L24 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01777 Ribosomal_L27e: Ribosomal L27e protein family; InterPro: IPR001141 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query134
3izr_N134 Localization Of The Large Subunit Ribosomal Protein 2e-62
4a18_F126 T.Thermophila 60s Ribosomal Subunit In Complex With 8e-20
3izs_N138 Localization Of The Large Subunit Ribosomal Protein 2e-19
3zf7_P189 High-resolution Cryo-electron Microscopy Structure 2e-08
3j21_583 Promiscuous Behavior Of Proteins In Archaeal Riboso 2e-06
2joy_A96 Nmr Structure Of 50s Ribosomal Protein L14e From Su 4e-05
2kds_A95 Structure Of Ribosomal Protein L14e From Sulfolobus 4e-05
>pdb|3IZR|N Chain N, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 134 Back     alignment and structure 
Iteration: 1

 Score =  233 bits (595), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 115/133 (86%), Positives = 126/133 (94%)
Query: 2   PFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKID 61
           PFKR+VEIGRVALVNYGK+YGRLVVIVDV+DQNRALVDAPDMVR Q+NFKRLSLTDIKID
Sbjct: 2   PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID 61
Query: 62  IPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLV 121
           I RVPKK TLI AME+ADVKNKWE+SSWG+KLIVQK+RASLNDFDRFK+MLAKIK+GG +
Sbjct: 62  IKRVPKKTTLIKAMEEADVKNKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAI 121
Query: 122 RQELAKLKKENAA 134
           RQELAKLKK  AA
Sbjct: 122 RQELAKLKKTAAA 134
>pdb|4A18|F Chain F, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1 Length = 126 Back     alignment and structure
>pdb|3IZS|N Chain N, Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 138 Back     alignment and structure
>pdb|3ZF7|P Chain P, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 189 Back     alignment and structure
>pdb|3J21|5 Chain 5, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Proteins) Length = 83 Back     alignment and structure
>pdb|2JOY|A Chain A, Nmr Structure Of 50s Ribosomal Protein L14e From Sulfolobus Solfataricus: Northeast Structural Genomics Consortium Target Ssr105 Length = 96 Back     alignment and structure
>pdb|2KDS|A Chain A, Structure Of Ribosomal Protein L14e From Sulfolobus Solfataricus Length = 95 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query134
3iz5_N134 60S ribosomal protein L14 (L14E); eukaryotic ribos 100.0
4a18_F126 RPL14; ribosome, eukaryotic initiation factor 6, E 100.0
3izc_N138 60S ribosomal protein RPL14 (L14E); eukaryotic rib 100.0
2joy_A96 50S ribosomal protein L14E; protein solution struc 99.95
3j21_583 50S ribosomal protein L14E; archaea, archaeal, KIN 99.95
4a18_N144 RPL27, ribosomal protein L22; ribosome, eukaryotic 99.71
3iz5_G219 60S ribosomal protein L6 (L6E); eukaryotic ribosom 99.32
3izc_a136 60S ribosomal protein RPL27 (L27E); eukaryotic rib 99.28
4a18_E191 RPL6; ribosome, eukaryotic initiation factor 6, EI 99.27
3iz5_a136 60S ribosomal protein L27 (L27E); eukaryotic ribos 99.27
3izc_G176 60S ribosomal protein RPL6 (L6E); eukaryotic ribos 98.8
3r8s_U102 50S ribosomal protein L24; protein biosynthesis, R 95.74
3j21_U121 50S ribosomal protein L24P; archaea, archaeal, KIN 95.63
2zjr_R115 50S ribosomal protein L24; ribosome, large ribosom 94.97
1vq8_T120 50S ribosomal protein L24P; ribosome 50S, protein- 94.67
2zkr_t145 60S ribosomal protein L26; protein-RNA complex, 60 94.39
2ftc_N96 Mitochondrial ribosomal protein L24; mitochondrial 93.89
3v2d_Y110 50S ribosomal protein L24; ribosome associated inh 93.88
1nz9_A58 Transcription antitermination protein NUSG; transc 93.62
3u5e_Y127 L33, YL33, 60S ribosomal protein L26-A; translatio 93.23
2e70_A71 Transcription elongation factor SPT5; KOW motif, s 93.19
3iz5_Y150 60S ribosomal protein L26 (L24P); eukaryotic ribos 93.12
2do3_A69 Transcription elongation factor SPT5; KOW motif, s 92.91
4a17_S135 RPL26, 60S ribosomal protein L21; eukaryotic ribos 91.85
2e6z_A59 Transcription elongation factor SPT5; KOW motif, s 90.52
3bbo_W191 Ribosomal protein L24; large ribosomal subunit, sp 89.09
3p8b_B152 Transcription antitermination protein NUSG; transc 88.85
2jvv_A181 Transcription antitermination protein NUSG; transc 88.09
2ckk_A127 KIN17; beta barrel, ribosomal protein, ribonucleop 82.57
>4a18_F RPL14; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_F 4a1b_F 4a1d_F 4adx_7 Back     alignment and structure
>2joy_A 50S ribosomal protein L14E; protein solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: b.34.5.7 PDB: 2kds_A Back     alignment and structure
>3j21_5 50S ribosomal protein L14E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus} Back     alignment and structure
>4a18_N RPL27, ribosomal protein L22; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_N 4a1b_N 4a1d_N Back     alignment and structure
>4a18_E RPL6; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_E 4a1b_E 4a1d_E Back     alignment and structure
>3r8s_U 50S ribosomal protein L24; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 2j28_U* 3fik_U 3j19_U 2wwq_U 3oat_U* 3oas_U* 3ofd_U 3ofc_U 3ofr_U* 3ofz_U* 3og0_U 3ofq_U 3r8t_U 3i1n_U 1vs8_U 1vs6_U 1vt2_U 3i1p_U 3i1r_U 3i1t_U ... Back     alignment and structure
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus} Back     alignment and structure
>2zjr_R 50S ribosomal protein L24; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.1 PDB: 1nwx_S* 1nwy_S* 1sm1_S* 1xbp_S* 2d3o_S 2zjp_R* 2zjq_R 1nkw_S 3cf5_R* 3dll_R* 3pio_R* 3pip_R* 1pnu_S 1pny_S 1vor_V 1vou_V 1vow_V 1voy_V 1vp0_V Back     alignment and structure
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ... Back     alignment and structure
>2zkr_t 60S ribosomal protein L26; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Back     alignment and structure
>2ftc_N Mitochondrial ribosomal protein L24; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_N Back     alignment and structure
>3v2d_Y 50S ribosomal protein L24; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_S 2hgj_X 2hgq_X 2hgu_X 1vsa_S 2j03_Y 2jl6_Y 2jl8_Y 2v47_Y 2v49_Y 2wdi_Y 2wdj_Y 2wdl_Y 2wdn_Y 2wh2_Y 2wh4_Y 2wrj_Y 2wrl_Y 2wro_Y 2wrr_Y ... Back     alignment and structure
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4 Back     alignment and structure
>3u5e_Y L33, YL33, 60S ribosomal protein L26-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_L 2ww9_L 2wwb_L 3o5h_X 3o58_X 3u5i_Y 4b6a_Y 1s1i_U 3izc_Y 3izs_Y 3jyw_U Back     alignment and structure
>2e70_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5 Back     alignment and structure
>4a17_S RPL26, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_S 4a1c_S 4a1e_S Back     alignment and structure
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3bbo_W Ribosomal protein L24; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} Back     alignment and structure
>3p8b_B Transcription antitermination protein NUSG; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus} PDB: 3qqc_D Back     alignment and structure
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G Back     alignment and structure
>2ckk_A KIN17; beta barrel, ribosomal protein, ribonucleoprotein, nuclear protein; 1.45A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 134
d2joya196 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolob 2e-24
>d2joya1 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolobus solfataricus [TaxId: 2287]} Length = 96 Back     information, alignment and structure

class: All beta proteins
fold: SH3-like barrel
superfamily: Translation proteins SH3-like domain
family: Ribosomal protein L14e
domain: Ribosomal protein L14e
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 87.8 bits (218), Expect = 2e-24
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 1  MPFKRYVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMV----RGQMNFKRLSLT 56
          MP    +E+GR+ +   G+E G   VIVD++D N  LV  P  +    R ++N   L  T
Sbjct: 1  MPA---IEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPT 57

Query: 57 DIKIDIPRVPKKKTLIDAMEKADVKNKWE 85
          D KIDI +    + +   +E++++    +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMK 86

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query134
d2joya196 Ribosomal protein L14e {Sulfolobus solfataricus [T 99.97
d2gycs199 Ribosomal proteins L24 (L24p) {Escherichia coli [T 96.11
d1vqot1119 Ribosomal proteins L24 (L24p) {Archaeon Haloarcula 95.51
d2zjrr1110 Ribosomal proteins L24 (L24p) {Deinococcus radiodu 95.47
d1nppa258 N-utilization substance G protein NusG, C-terminal 95.05
d1nz9a_58 N-utilization substance G protein NusG, C-terminal 94.1
d2do3a162 Transcription elongation factor SPT5 {Human (Homo 91.93
d2j01y1101 Ribosomal proteins L24 (L24p) {Thermus thermophilu 89.98
>d2joya1 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
class: All beta proteins
fold: SH3-like barrel
superfamily: Translation proteins SH3-like domain
family: Ribosomal protein L14e
domain: Ribosomal protein L14e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=4.5e-32  Score=191.95  Aligned_cols=82  Identities=30%  Similarity=0.499  Sum_probs=80.1

Q ss_pred             ceecCeEEEEccccCCCcEEEEEEeecCCeEEEeCC----CCcceeeeccCeeeeceEEecCCCCChHHHHHHHHHhchH
Q 047135            6 YVEIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAP----DMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVK   81 (134)
Q Consensus         6 ~veiGrVV~i~~G~~~Gk~~VIVdiiD~~rvLVDGp----~v~Rk~~n~khl~lT~~~i~i~~~~~~~~v~ka~e~~~v~   81 (134)
                      +||+||||++++||++||+||||||+|+||+|||||    +|+||++|++||+||+++++|+++++++.|+++|+++++.
T Consensus         3 ~VevGrV~ii~~G~~~GK~~vIvdiid~~rvLVdGP~~~tgV~r~~in~k~l~lT~~~i~i~~~a~~~~v~ka~~~~~i~   82 (96)
T d2joya1           3 AIEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPTDKKIDIQKGASDEEVKKKLEESNLT   82 (96)
T ss_dssp             SSSTTEEEECSSSSTTCCEEEEEEECSSSCEEEECCTTTTCCCCEEESCSSCEEEEEECCCCSSCCHHHHHHHHHHTTCH
T ss_pred             ceeccEEEEEeecCCCCCEEEEEEEecCCeEEEecccccCCcccEEEchHHEEeccEEEEccCCCCcHHHHHHHHhcCcH
Confidence            499999999999999999999999999999999999    6999999999999999999999999999999999999999


Q ss_pred             HHhhhc
Q 047135           82 NKWESS   87 (134)
Q Consensus        82 ~kw~~s   87 (134)
                      ++|++.
T Consensus        83 ~kw~e~   88 (96)
T d2joya1          83 EYMKEK   88 (96)
T ss_dssp             HHHHCC
T ss_pred             HHHhhc
Confidence            999986
>d2gycs1 b.34.5.1 (S:3-101) Ribosomal proteins L24 (L24p) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vqot1 b.34.5.1 (T:1-119) Ribosomal proteins L24 (L24p) {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2zjrr1 b.34.5.1 (R:4-113) Ribosomal proteins L24 (L24p) {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1nppa2 b.34.5.4 (A:191-248) N-utilization substance G protein NusG, C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1nz9a_ b.34.5.4 (A:) N-utilization substance G protein NusG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2do3a1 b.34.5.5 (A:462-523) Transcription elongation factor SPT5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j01y1 b.34.5.1 (Y:2-102) Ribosomal proteins L24 (L24p) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure