Citrus Sinensis ID: 047142

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-
MPYPGRGHINSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQLLNQLEPPVTYILANVELSWRIRIELGCNSQEKTNSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASRLNQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKEIGT
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHccccccccccccccccccccccHHcccccccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHcccccEEEcccccHHHHHccccccEEcccccccHHHHHHHcccccccccccccccccHHHHHcccccEEEEcccccc
ccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHccccEEEEcccccHHHHHccccccEEEEcccccHHHHHHHccccEEEccccccccccHEEEHHEEEEEEEEcccccc
mpypgrghinSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQllnqleppvtYILANVELSWRIRIELGcnsqektnsdndpddiqwldsqpvdFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARgdasrlnqtcgdtgqilpwswcdqlrischssaggflthrgsNSILKIFMLALLCSLFLfsldqhpnsnqivgnwkigkrmkkeigt
mpypgrghINSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQLLNQLEPPVTYILANVELSWRIRIELGCNSqektnsdndPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASRLNQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSldqhpnsnqivgnwkigkRMKKEIGT
MPYPGRGHINSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQLLNQLEPPVTYILANVELSWRIRIELGCNSQEKTNSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASRLNQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMlallcslflfslDQHPNSNQIVGNWKIGKRMKKEIGT
********INSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQLLNQLEPPVTYILANVELSWRIRIELGCN*************IQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASRLNQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKI**********
MPYPG*GHINSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQLLNQLEPPVTYILANVELSWRIR*****************DDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASR****CGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKE***
MPYPGRGHINSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQLLNQLEPPVTYILANVELSWRIRIELGCNSQEKTNSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASRLNQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKEIGT
**Y*GRGHINSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQLLNQLEPPVTYILANVELSWRIRIELGC***EKTNSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASRLNQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKEIG*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPYPGRGHINSMMNLCNLIASKGPYIRSLLLLDRGSEFSRFYEAVITKVVVPFEQLLNQLEPPVTYILANVELSWRIRIELGCNSQEKTNSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASRLNQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKEIGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query231 2.2.26 [Sep-21-2011]
O64733455 UDP-glycosyltransferase 8 yes no 0.588 0.298 0.474 1e-27
O64732440 UDP-glycosyltransferase 8 no no 0.593 0.311 0.428 2e-24
Q9ZUV0482 UDP-glycosyltransferase 8 no no 0.554 0.265 0.357 1e-15
Q9SKC5456 UDP-glycosyltransferase 7 no no 0.549 0.278 0.362 1e-12
Q41819471 Indole-3-acetate beta-glu N/A no 0.593 0.290 0.305 6e-12
Q9M052460 UDP-glycosyltransferase 7 no no 0.610 0.306 0.310 1e-11
Q9SYK9453 UDP-glycosyltransferase 7 no no 0.558 0.284 0.345 2e-11
Q9SJL0490 UDP-glycosyltransferase 8 no no 0.701 0.330 0.308 3e-11
Q9LVF0496 UDP-glycosyltransferase 8 no no 0.575 0.268 0.305 6e-11
Q9M9E7489 UDP-glycosyltransferase 8 no no 0.800 0.378 0.294 1e-10
>sp|O64733|U87A2_ARATH UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=2 SV=1 Back     alignment and function desciption
 Score =  123 bits (308), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 88/139 (63%), Gaps = 3/139 (2%)

Query: 90  NSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASR 149
           N + +P+ IQWL+ QP   VL IS GSFLSVS AQM+EI+ GL+ SGVRFL VARG   +
Sbjct: 252 NDNKEPNYIQWLEEQPEGSVLYISQGSFLSVSEAQMEEIVKGLRESGVRFLWVARGGELK 311

Query: 150 LNQTC-GDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQ 208
           L +   G  G ++  SWCDQLR+ CH + GGF TH G NS L+     +    F    DQ
Sbjct: 312 LKEALEGSLGVVV--SWCDQLRVLCHKAVGGFWTHCGFNSTLEGIYSGVPMLAFPLFWDQ 369

Query: 209 HPNSNQIVGNWKIGKRMKK 227
             N+  IV +W++G R+++
Sbjct: 370 ILNAKMIVEDWRVGMRIER 388

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|O64732|U87A1_ARATH UDP-glycosyltransferase 87A1 OS=Arabidopsis thaliana GN=UGT87A1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUV0|U86A2_ARATH UDP-glycosyltransferase 86A2 OS=Arabidopsis thaliana GN=UGT86A2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKC5|U74D1_ARATH UDP-glycosyltransferase 74D1 OS=Arabidopsis thaliana GN=UGT74D1 PE=1 SV=1 Back     alignment and function description
>sp|Q41819|IABG_MAIZE Indole-3-acetate beta-glucosyltransferase OS=Zea mays GN=IAGLU PE=1 SV=1 Back     alignment and function description
>sp|Q9M052|U76F1_ARATH UDP-glycosyltransferase 76F1 OS=Arabidopsis thaliana GN=UGT76F1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SYK9|U74E2_ARATH UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana GN=UGT74E2 PE=1 SV=1 Back     alignment and function description
>sp|Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana GN=UGT86A1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LVF0|U84A2_ARATH UDP-glycosyltransferase 84A2 OS=Arabidopsis thaliana GN=UGT84A2 PE=1 SV=1 Back     alignment and function description
>sp|Q9M9E7|U85A4_ARATH UDP-glycosyltransferase 85A4 OS=Arabidopsis thaliana GN=UGT85A4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query231
224055423 459 predicted protein [Populus trichocarpa] 0.645 0.324 0.565 1e-36
224103863 455 predicted protein [Populus trichocarpa] 0.606 0.307 0.562 2e-34
255584269 456 UDP-glucosyltransferase, putative [Ricin 0.645 0.326 0.509 1e-33
359478519 467 PREDICTED: UDP-glycosyltransferase 87A2- 0.636 0.314 0.54 2e-33
297745834 364 unnamed protein product [Vitis vinifera] 0.597 0.379 0.556 3e-33
297745832 449 unnamed protein product [Vitis vinifera] 0.649 0.334 0.535 3e-33
357491077 455 Indole-3-acetate beta-glucosyltransferas 0.623 0.316 0.513 4e-33
225434462 460 PREDICTED: UDP-glycosyltransferase 87A2- 0.649 0.326 0.535 4e-33
359478621 458 PREDICTED: UDP-glycosyltransferase 87A2- 0.597 0.301 0.556 4e-33
169807680219 UDP-glucosyl transferase [Platanus x ace 0.645 0.680 0.509 7e-33
>gi|224055423|ref|XP_002298503.1| predicted protein [Populus trichocarpa] gi|222845761|gb|EEE83308.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/152 (56%), Positives = 102/152 (67%), Gaps = 3/152 (1%)

Query: 79  IELGCNSQEKTNSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVR 138
           +EL  N      S   PD +QWLDSQP D VL ISLGSFLSVSS QMDEI+AGLQ SGVR
Sbjct: 243 LELEGNLSGTNYSHMAPDYLQWLDSQPKDSVLYISLGSFLSVSSTQMDEIIAGLQDSGVR 302

Query: 139 FLRVARGDASRLNQTCG-DTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMLAL 197
           +L VARG+ASRL   C  D G +LP  WCDQL++ CHSS GGF TH G NS L+     +
Sbjct: 303 YLWVARGEASRLKDICSDDMGLVLP--WCDQLKVLCHSSIGGFWTHCGWNSTLEAVFAGV 360

Query: 198 LCSLFLFSLDQHPNSNQIVGNWKIGKRMKKEI 229
               F   LDQ PNSNQI+  W+IG ++K+ +
Sbjct: 361 PMLTFPLFLDQEPNSNQILEGWRIGWKVKRGV 392

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224103863|ref|XP_002313223.1| predicted protein [Populus trichocarpa] gi|222849631|gb|EEE87178.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255584269|ref|XP_002532871.1| UDP-glucosyltransferase, putative [Ricinus communis] gi|223527356|gb|EEF29500.1| UDP-glucosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359478519|ref|XP_002274566.2| PREDICTED: UDP-glycosyltransferase 87A2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745834|emb|CBI15890.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745832|emb|CBI15888.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357491077|ref|XP_003615826.1| Indole-3-acetate beta-glucosyltransferase [Medicago truncatula] gi|355517161|gb|AES98784.1| Indole-3-acetate beta-glucosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|225434462|ref|XP_002278049.1| PREDICTED: UDP-glycosyltransferase 87A2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359478621|ref|XP_002274420.2| PREDICTED: UDP-glycosyltransferase 87A2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|169807680|emb|CAQ16339.1| UDP-glucosyl transferase [Platanus x acerifolia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query231
TAIR|locus:2060832455 UGT87A2 "UDP-glucosyl transfer 0.588 0.298 0.467 3.8e-35
TAIR|locus:2060817440 AT2G30150 [Arabidopsis thalian 0.593 0.311 0.421 1.4e-31
TAIR|locus:2046193482 AT2G28080 "AT2G28080" [Arabido 0.554 0.265 0.35 6.9e-19
TAIR|locus:2031983453 UGT74E2 "AT1G05680" [Arabidops 0.558 0.284 0.352 2e-18
TAIR|locus:2032105489 UGT85A4 "AT1G78270" [Arabidops 0.805 0.380 0.290 5.9e-17
TAIR|locus:2045268457 AT2G31790 [Arabidopsis thalian 0.614 0.310 0.288 3.2e-16
TAIR|locus:2045238456 UGT74D1 "UDP-glucosyl transfer 0.554 0.280 0.343 8.2e-16
TAIR|locus:2057976490 AT2G36970 [Arabidopsis thalian 0.748 0.353 0.295 3.9e-14
TAIR|locus:2078916460 AT3G55700 [Arabidopsis thalian 0.610 0.306 0.292 6.3e-14
TAIR|locus:2089880496 UGT84A2 "UDP-glucosyl transfer 0.575 0.268 0.298 2.3e-13
TAIR|locus:2060832 UGT87A2 "UDP-glucosyl transferase 87A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 304 (112.1 bits), Expect = 3.8e-35, Sum P(2) = 3.8e-35
 Identities = 65/139 (46%), Positives = 86/139 (61%)

Query:    90 NSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASR 149
             N + +P+ IQWL+ QP   VL IS GSFLSVS AQM+EI+ GL+ SGVRFL VARG   +
Sbjct:   252 NDNKEPNYIQWLEEQPEGSVLYISQGSFLSVSEAQMEEIVKGLRESGVRFLWVARGGELK 311

Query:   150 LNQTC-GDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILKIFMXXXXXXXXXXXXDQ 208
             L +   G  G ++  SWCDQLR+ CH + GGF TH G NS L+               DQ
Sbjct:   312 LKEALEGSLGVVV--SWCDQLRVLCHKAVGGFWTHCGFNSTLEGIYSGVPMLAFPLFWDQ 369

Query:   209 HPNSNQIVGNWKIGKRMKK 227
               N+  IV +W++G R+++
Sbjct:   370 ILNAKMIVEDWRVGMRIER 388
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA;ISS
GO:0005829 "cytosol" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0009909 "regulation of flower development" evidence=IMP
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
TAIR|locus:2060817 AT2G30150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046193 AT2G28080 "AT2G28080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031983 UGT74E2 "AT1G05680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032105 UGT85A4 "AT1G78270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045268 AT2G31790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045238 UGT74D1 "UDP-glucosyl transferase 74D1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057976 AT2G36970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078916 AT3G55700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089880 UGT84A2 "UDP-glucosyl transferase 84A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query231
PLN02448459 PLN02448, PLN02448, UDP-glycosyltransferase family 2e-61
PLN02448 459 PLN02448, PLN02448, UDP-glycosyltransferase family 8e-25
PLN00164480 PLN00164, PLN00164, glucosyltransferase; Provision 3e-16
PLN02555480 PLN02555, PLN02555, limonoid glucosyltransferase 5e-14
PLN03004451 PLN03004, PLN03004, UDP-glycosyltransferase 2e-12
PLN02992481 PLN02992, PLN02992, coniferyl-alcohol glucosyltran 1e-11
PLN02167475 PLN02167, PLN02167, UDP-glycosyltransferase family 3e-11
PLN03007482 PLN03007, PLN03007, UDP-glucosyltransferase family 4e-11
PLN02173449 PLN02173, PLN02173, UDP-glucosyl transferase famil 3e-10
PLN03015470 PLN03015, PLN03015, UDP-glucosyl transferase 6e-10
PLN02152455 PLN02152, PLN02152, indole-3-acetate beta-glucosyl 7e-10
PLN02210456 PLN02210, PLN02210, UDP-glucosyl transferase 1e-09
PLN02410451 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl 4e-09
PLN02863477 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl 1e-08
PLN02670472 PLN02670, PLN02670, transferase, transferring glyc 2e-08
PLN02562448 PLN02562, PLN02562, UDP-glycosyltransferase 5e-08
PLN02554481 PLN02554, PLN02554, UDP-glycosyltransferase family 2e-07
PLN02207468 PLN02207, PLN02207, UDP-glycosyltransferase 7e-07
PLN02534491 PLN02534, PLN02534, UDP-glycosyltransferase 1e-06
>gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein Back     alignment and domain information 
 Score =  198 bits (506), Expect = 2e-61
 Identities = 93/157 (59%), Positives = 108/157 (68%), Gaps = 12/157 (7%)

Query: 80  ELGCNSQEKTNSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRF 139
           EL  NS    N DN+PD  QWLDSQP   VL +SLGSFLSVSSAQMDEI AGL+ SGVRF
Sbjct: 247 ELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRF 306

Query: 140 LRVARGDASRLNQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILK-IF----M 194
           L VARG+ASRL + CGD G ++P  WCDQL++ CHSS GGF TH G NS L+ +F    M
Sbjct: 307 LWVARGEASRLKEICGDMGLVVP--WCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPM 364

Query: 195 LALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKEIGT 231
           L     LF    DQ  NS  IV +WKIG R+K+E+G 
Sbjct: 365 LTF--PLF---WDQPLNSKLIVEDWKIGWRVKREVGE 396

Length = 459
>gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein Back     alignment and domain information
>gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase Back     alignment and domain information
>gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase Back     alignment and domain information
>gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase Back     alignment and domain information
>gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein Back     alignment and domain information
>gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein Back     alignment and domain information
>gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein Back     alignment and domain information
>gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase Back     alignment and domain information
>gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase Back     alignment and domain information
>gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase Back     alignment and domain information
>gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information
>gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information
>gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups Back     alignment and domain information
>gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase Back     alignment and domain information
>gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein Back     alignment and domain information
>gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase Back     alignment and domain information
>gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 231
PLN02410451 UDP-glucoronosyl/UDP-glucosyl transferase family p 100.0
PLN03004451 UDP-glycosyltransferase 100.0
PLN02173449 UDP-glucosyl transferase family protein 100.0
PLN02152455 indole-3-acetate beta-glucosyltransferase 100.0
PLN02670472 transferase, transferring glycosyl groups 100.0
PLN00414446 glycosyltransferase family protein 100.0
PLN02992481 coniferyl-alcohol glucosyltransferase 100.0
PLN00164480 glucosyltransferase; Provisional 100.0
PLN02555480 limonoid glucosyltransferase 100.0
PLN03015470 UDP-glucosyl transferase 100.0
PLN02562448 UDP-glycosyltransferase 100.0
PLN02208442 glycosyltransferase family protein 100.0
PLN02207468 UDP-glycosyltransferase 100.0
PLN02863477 UDP-glucoronosyl/UDP-glucosyl transferase family p 100.0
PLN02764453 glycosyltransferase family protein 100.0
PLN02534491 UDP-glycosyltransferase 100.0
PLN02210456 UDP-glucosyl transferase 100.0
PLN02167475 UDP-glycosyltransferase family protein 100.0
PLN02554481 UDP-glycosyltransferase family protein 100.0
PLN02448459 UDP-glycosyltransferase family protein 100.0
PLN03007482 UDP-glucosyltransferase family protein 100.0
KOG1192496 consensus UDP-glucuronosyl and UDP-glucosyl transf 100.0
PF00201 500 UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera 100.0
PHA03392507 egt ecdysteroid UDP-glucosyltransferase; Provision 99.98
cd03784401 GT1_Gtf_like This family includes the Gtfs, a grou 99.97
TIGR01426392 MGT glycosyltransferase, MGT family. This model de 99.97
COG1819406 Glycosyl transferases, related to UDP-glucuronosyl 99.94
TIGR00661321 MJ1255 conserved hypothetical protein. This model 99.65
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 99.56
PRK12446352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 99.53
COG0707357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 99.16
PF04101167 Glyco_tran_28_C: Glycosyltransferase family 28 C-t 99.04
TIGR03590279 PseG pseudaminic acid biosynthesis-associated prot 99.01
cd03785350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 98.82
PRK13609380 diacylglycerol glucosyltransferase; Provisional 98.58
PRK00726357 murG undecaprenyldiphospho-muramoylpentapeptide be 98.14
TIGR00215385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 97.91
PRK13608391 diacylglycerol glucosyltransferase; Provisional 97.88
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 97.69
PLN02605382 monogalactosyldiacylglycerol synthase 97.58
COG4671400 Predicted glycosyl transferase [General function p 97.56
PRK00025380 lpxB lipid-A-disaccharide synthase; Reviewed 97.23
PF03033139 Glyco_transf_28: Glycosyltransferase family 28 N-t 97.22
KOG3349170 consensus Predicted glycosyltransferase [General f 97.13
PF0672297 DUF1205: Protein of unknown function (DUF1205); In 97.08
cd03823359 GT1_ExpE7_like This family is most closely related 96.96
COG3980318 spsG Spore coat polysaccharide biosynthesis protei 96.89
PF13844468 Glyco_transf_41: Glycosyl transferase family 41; P 96.69
cd03814364 GT1_like_2 This family is most closely related to 96.55
COG5017161 Uncharacterized conserved protein [Function unknow 95.76
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 95.72
COG1519419 KdtA 3-deoxy-D-manno-octulosonic-acid transferase 95.64
cd03786363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 95.29
cd03817374 GT1_UGDG_like This family is most closely related 94.89
PF02350346 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; 94.79
TIGR03492396 conserved hypothetical protein. This protein famil 94.71
COG3914620 Spy Predicted O-linked N-acetylglucosamine transfe 93.9
cd03801374 GT1_YqgM_like This family is most closely related 93.76
KOG4626966 consensus O-linked N-acetylglucosamine transferase 93.61
cd03798377 GT1_wlbH_like This family is most closely related 93.39
cd03794394 GT1_wbuB_like This family is most closely related 93.36
cd03795357 GT1_like_4 This family is most closely related to 93.34
cd03811353 GT1_WabH_like This family is most closely related 93.32
cd03800398 GT1_Sucrose_synthase This family is most closely r 93.24
cd03804351 GT1_wbaZ_like This family is most closely related 93.21
cd03808359 GT1_cap1E_like This family is most closely related 93.12
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 92.79
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 92.45
cd03825365 GT1_wcfI_like This family is most closely related 92.35
cd04946407 GT1_AmsK_like This family is most closely related 92.31
cd03819355 GT1_WavL_like This family is most closely related 91.82
cd03821 375 GT1_Bme6_like This family is most closely related 91.57
TIGR00236365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 91.54
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 90.7
cd03802335 GT1_AviGT4_like This family is most closely relate 90.56
cd03822366 GT1_ecORF704_like This family is most closely rela 90.36
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 90.28
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 88.77
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 88.48
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 88.44
cd04962371 GT1_like_5 This family is most closely related to 87.72
cd03807 365 GT1_WbnK_like This family is most closely related 87.38
cd04951360 GT1_WbdM_like This family is most closely related 87.13
cd03820348 GT1_amsD_like This family is most closely related 86.88
cd03805392 GT1_ALG2_like This family is most closely related 86.82
cd04955363 GT1_like_6 This family is most closely related to 86.09
cd03796398 GT1_PIG-A_like This family is most closely related 85.94
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 85.1
TIGR03568365 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, 84.6
PF02684373 LpxB: Lipid-A-disaccharide synthetase; InterPro: I 83.91
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 83.86
cd03809365 GT1_mtfB_like This family is most closely related 83.34
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 83.07
cd03816415 GT1_ALG1_like This family is most closely related 82.46
cd03818396 GT1_ExpC_like This family is most closely related 80.61
PRK05749425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 80.35
PRK14089347 ipid-A-disaccharide synthase; Provisional 80.27
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information 
Probab=100.00  E-value=3e-51  Score=372.35  Aligned_cols=224  Identities=26%  Similarity=0.395  Sum_probs=186.1

Q ss_pred             CCCCCCCChHHHHHHHHHHHhcCCC-------------------ceEee--CC----C-CCCCHHHHHHHHHHhChHHHH
Q 047142            1 MPYPGRGHINSMMNLCNLIASKGPY-------------------IRSLL--LL----D-RGSEFSRFYEAVITKVVVPFE   54 (231)
Q Consensus         1 ~p~Pa~GHv~Pll~la~~L~~~Gp~-------------------~~f~~--~~----~-~~~~~~~~~~~~~~~~~~~l~   54 (231)
                      +|||+|||+||||+||++|++||-.                   ++|.+  ++    + .......++..+.+.+.++++
T Consensus        13 vPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~~~~~~~i~~~~ip~glp~~~~~~~~~~~~~~~~~~~~~~~~~   92 (451)
T PLN02410         13 VPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPSDDFTDFQFVTIPESLPESDFKNLGPIEFLHKLNKECQVSFK   92 (451)
T ss_pred             ECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccccccCCCCeEEEeCCCCCCcccccccCHHHHHHHHHHHhHHHHH
Confidence            6999999999999999999999922                   44444  11    0 011234677777778889999


Q ss_pred             HHHHHhC----CCceEEEEcCCcchhhccc--------------------------c-------c---------------
Q 047142           55 QLLNQLE----PPVTYILANVELSWRIRIE--------------------------L-------G---------------   82 (231)
Q Consensus        55 ~ll~~~~----~~~~~vv~D~~~~~a~~vA--------------------------~-------~---------------   82 (231)
                      ++++++.    ++|+|||+|.+++|+.++|                          +       +               
T Consensus        93 ~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~  172 (451)
T PLN02410         93 DCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEF  172 (451)
T ss_pred             HHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccCccccCCCC
Confidence            9998762    5689999999999999999                          0       0               


Q ss_pred             ------------------------------------CCC-CC-------------C------------CC-C----CCCc
Q 047142           83 ------------------------------------CNS-QE-------------K------------TN-S----DNDP   95 (231)
Q Consensus        83 ------------------------------------~n~-~~-------------~------------~~-~----~~~~   95 (231)
                                                          .|| ++             .            .. .    .+++
T Consensus       173 ~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~  252 (451)
T PLN02410        173 HPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENK  252 (451)
T ss_pred             CCCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccch
Confidence                                                011 10             0            00 0    1234


Q ss_pred             ccHHhhcCCCCCeEEEEecccCCCCCHHHHHHHHHHHhhCCCeEEEEEeCC-----------ccccccccCCCceEEcCc
Q 047142           96 DDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGD-----------ASRLNQTCGDTGQILPWS  164 (231)
Q Consensus        96 ~~~~wl~~~~~~~vvyvs~Gs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----------~~~~~~~~~~~~~v~~~~  164 (231)
                      +|.+|||++++++||||||||...++.+++.+++.+|+.++++|+|+++..           +++|.+++++|+++++  
T Consensus       253 ~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~--  330 (451)
T PLN02410        253 SCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVK--  330 (451)
T ss_pred             HHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEc--
Confidence            578999999999999999999999999999999999999999999999832           4577788889999998  


Q ss_pred             ccChhhhcccCCcceEEeCCCcchHHHHHHhCceEEeecccccchHHHHHHhhhcceEEEec
Q 047142          165 WCDQLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMK  226 (231)
Q Consensus       165 w~Pq~~iL~h~~v~~fitHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~G~~l~  226 (231)
                      |+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|++++
T Consensus       331 w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~  392 (451)
T PLN02410        331 WAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE  392 (451)
T ss_pred             cCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC
Confidence            99999999999999999999999999999999999999999999999999999899999985

>PLN03004 UDP-glycosyltransferase Back     alignment and domain information
>PLN02173 UDP-glucosyl transferase family protein Back     alignment and domain information
>PLN02152 indole-3-acetate beta-glucosyltransferase Back     alignment and domain information
>PLN02670 transferase, transferring glycosyl groups Back     alignment and domain information
>PLN00414 glycosyltransferase family protein Back     alignment and domain information
>PLN02992 coniferyl-alcohol glucosyltransferase Back     alignment and domain information
>PLN00164 glucosyltransferase; Provisional Back     alignment and domain information
>PLN02555 limonoid glucosyltransferase Back     alignment and domain information
>PLN03015 UDP-glucosyl transferase Back     alignment and domain information
>PLN02562 UDP-glycosyltransferase Back     alignment and domain information
>PLN02208 glycosyltransferase family protein Back     alignment and domain information
>PLN02207 UDP-glycosyltransferase Back     alignment and domain information
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information
>PLN02764 glycosyltransferase family protein Back     alignment and domain information
>PLN02534 UDP-glycosyltransferase Back     alignment and domain information
>PLN02210 UDP-glucosyl transferase Back     alignment and domain information
>PLN02167 UDP-glycosyltransferase family protein Back     alignment and domain information
>PLN02554 UDP-glycosyltransferase family protein Back     alignment and domain information
>PLN02448 UDP-glycosyltransferase family protein Back     alignment and domain information
>PLN03007 UDP-glucosyltransferase family protein Back     alignment and domain information
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] Back     alignment and domain information
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule Back     alignment and domain information
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional Back     alignment and domain information
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin Back     alignment and domain information
>TIGR01426 MGT glycosyltransferase, MGT family Back     alignment and domain information
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] Back     alignment and domain information
>TIGR00661 MJ1255 conserved hypothetical protein Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>COG4671 Predicted glycosyl transferase [General function prediction only] Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only] Back     alignment and domain information
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>COG5017 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 Back     alignment and domain information
>TIGR03492 conserved hypothetical protein Back     alignment and domain information
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing Back     alignment and domain information
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PRK14089 ipid-A-disaccharide synthase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query231
2vce_A480 Characterization And Engineering Of The Bifunctiona 1e-09
2acv_A463 Crystal Structure Of Medicago Truncatula Ugt71g1 Le 2e-09
2acw_A465 Crystal Structure Of Medicago Truncatula Ugt71g1 Co 3e-09
2pq6_A482 Crystal Structure Of Medicago Truncatula Ugt85h2- I 4e-08
3hbf_A454 Structure Of Ugt78g1 Complexed With Myricetin And U 4e-08
2c1x_A456 Structure And Activity Of A Flavonoid 3-O Glucosylt 1e-04
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 Back     alignment and structure 
Iteration: 1

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 86  QEKTNSDNDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARG 145
           +++     + + ++WLD+QP+  VL +S GS  +++  Q++E+  GL  S  RFL V R 
Sbjct: 247 KQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRS 306
Query: 146 DASRLNQTCGDT---------------------GQILPWSWCDQLRISCHSSAGGFLTHR 184
            +   N +  D+                     G ++P+ W  Q ++  H S GGFLTH 
Sbjct: 307 PSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPF-WAPQAQVLAHPSTGGFLTHC 365
Query: 185 GSNSILK 191
           G NS L+
Sbjct: 366 GWNSTLE 372
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 Back     alignment and structure
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 Back     alignment and structure
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 Back     alignment and structure
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 Back     alignment and structure
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query231
2acv_A463 Triterpene UDP-glucosyl transferase UGT71G1; glyco 1e-26
2acv_A 463 Triterpene UDP-glucosyl transferase UGT71G1; glyco 1e-04
2pq6_A482 UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl 1e-26
2pq6_A 482 UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl 2e-08
2c1x_A456 UDP-glucose flavonoid 3-O glycosyltransferase; WIN 2e-25
2c1x_A 456 UDP-glucose flavonoid 3-O glycosyltransferase; WIN 1e-06
2vch_A480 Hydroquinone glucosyltransferase; glycosyltransfer 5e-23
3hbf_A454 Flavonoid 3-O-glucosyltransferase; glycosyltransfe 2e-22
3hbf_A 454 Flavonoid 3-O-glucosyltransferase; glycosyltransfe 1e-05
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 Back     alignment and structure
 Score =  105 bits (265), Expect = 1e-26
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 83  CNSQEKTNSDNDPDD--IQWLDSQPVDFVLNISLGSF-LSVSSAQMDEILAGLQMSGVRF 139
              Q     D    D  ++WLD QP   V+ +  GS  +S   +Q+ EI  GL+ SGVRF
Sbjct: 250 LKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRF 309

Query: 140 LRVARGDASRL------NQTCGDTGQILPWSWCDQLRISCHSSAGGFLTHRGSNSILK-I 192
           L     +                 G I    W  Q+ +  H + GGF++H G NSIL+ +
Sbjct: 310 LWSNSAEKKVFPEGFLEWMELEGKGMI--CGWAPQVEVLAHKAIGGFVSHCGWNSILESM 367

Query: 193 F----MLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKE 228
           +    +L      +    +Q  N+ ++V  W +G  ++ +
Sbjct: 368 WFGVPILT-----WPIYAEQQLNAFRLVKEWGVGLGLRVD 402
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 Back     alignment and structure
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 Back     alignment and structure
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 Back     alignment and structure
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 Back     alignment and structure
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 Back     alignment and structure
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 Back     alignment and structure
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 Back     alignment and structure
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query231
3hbf_A454 Flavonoid 3-O-glucosyltransferase; glycosyltransfe 100.0
2vch_A480 Hydroquinone glucosyltransferase; glycosyltransfer 100.0
2pq6_A482 UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl 100.0
2c1x_A456 UDP-glucose flavonoid 3-O glycosyltransferase; WIN 100.0
2acv_A463 Triterpene UDP-glucosyl transferase UGT71G1; glyco 100.0
4amg_A400 Snogd; transferase, polyketide biosynthesis, GT1 f 100.0
2iya_A424 OLEI, oleandomycin glycosyltransferase; carbohydra 99.97
1iir_A415 Glycosyltransferase GTFB; rossmann fold; 1.80A {Am 99.95
1rrv_A416 Glycosyltransferase GTFD; GT-B, glycosyltransferas 99.94
2p6p_A384 Glycosyl transferase; X-RAY-diffraction,urdamycina 99.94
3rsc_A415 CALG2; TDP, enediyne, structural genomics, PSI-2, 99.94
3ia7_A402 CALG4; glycosysltransferase, calicheamicin, enediy 99.94
3h4t_A404 Glycosyltransferase GTFA, glycosyltransferase; van 99.94
3oti_A398 CALG3; calicheamicin, TDP, structural genomics, PS 99.93
4fzr_A398 SSFS6; structural genomics, PSI-biology, protein s 99.93
2yjn_A441 ERYCIII, glycosyltransferase; transferase, cytochr 99.93
2iyf_A430 OLED, oleandomycin glycosyltransferase; antibiotic 99.91
3tsa_A391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 99.91
2o6l_A170 UDP-glucuronosyltransferase 2B7; drug metabolism, 99.9
3otg_A412 CALG1; calicheamicin, TDP, structural genomics, PS 99.87
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 99.66
2jzc_A224 UDP-N-acetylglucosamine transferase subunit ALG13; 99.41
3hbm_A282 UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je 98.76
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 98.51
4gyw_A723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 96.83
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 96.46
1v4v_A376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 96.26
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 96.26
3q3e_A631 HMW1C-like glycosyltransferase; N-glycosylation; 2 96.24
4hwg_A385 UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc 95.07
3dzc_A396 UDP-N-acetylglucosamine 2-epimerase; structural ge 94.6
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 94.23
3ot5_A403 UDP-N-acetylglucosamine 2-epimerase; structural ge 94.18
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 93.5
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 93.0
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 92.69
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 92.69
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 92.17
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 91.99
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 91.21
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 91.18
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 90.41
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 88.65
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 86.58
1psw_A348 ADP-heptose LPS heptosyltransferase II; structural 86.46
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 85.76
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 81.3
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 80.79
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* Back     alignment and structure
Probab=100.00  E-value=8.4e-49  Score=356.16  Aligned_cols=134  Identities=28%  Similarity=0.408  Sum_probs=124.3

Q ss_pred             CcccHHhhcCCCCCeEEEEecccCCCCCHHHHHHHHHHHhhCCCeEEEEEeCC-----ccccccccCCCceEEcCcccCh
Q 047142           94 DPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGD-----ASRLNQTCGDTGQILPWSWCDQ  168 (231)
Q Consensus        94 ~~~~~~wl~~~~~~~vvyvs~Gs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----~~~~~~~~~~~~~v~~~~w~Pq  168 (231)
                      ++++.+||+.++++++|||||||...++.+++.+++.++++++++|+|+++.+     +++|.+++++|+++++  |+||
T Consensus       260 ~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~--w~Pq  337 (454)
T 3hbf_A          260 EHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKIVA--WAPQ  337 (454)
T ss_dssp             TTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHTTTTEEEES--SCCH
T ss_pred             hHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhcCCceEEEe--eCCH
Confidence            56799999999889999999999999999999999999999999999999875     4566677788999998  9999


Q ss_pred             hhhcccCCcceEEeCCCcchHHHHHHhCceEEeecccccchHHHHHHhhhcceEEEecccC
Q 047142          169 LRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKEI  229 (231)
Q Consensus       169 ~~iL~h~~v~~fitHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~  229 (231)
                      .++|+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|+.++.+.
T Consensus       338 ~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~  398 (454)
T 3hbf_A          338 VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGV  398 (454)
T ss_dssp             HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGS
T ss_pred             HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCC
Confidence            9999999999999999999999999999999999999999999999999789999997644
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Back     alignment and structure
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Back     alignment and structure
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Back     alignment and structure
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Back     alignment and structure
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* Back     alignment and structure
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* Back     alignment and structure
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Back     alignment and structure
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A Back     alignment and structure
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 231
d2pq6a1473 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe 9e-13
d2pq6a1 473 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe 0.002
d2vcha1471 c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera 2e-11
d2c1xa1450 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc 5e-11
d2c1xa1 450 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc 5e-04
d2acva1461 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf 6e-09
d2acva1 461 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf 3e-04
d1iira_401 c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol 3e-06
d1rrva_401 c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am 3e-05
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

 Score = 64.8 bits (156), Expect = 9e-13
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 7/182 (3%)

Query: 55  QLLNQLEPPVTYILANVELSWRIRIELGCNSQEKTNSDNDPDDIQWLDSQPVDFVLNISL 114
             L+   P +  I     L  +       +S +      D + + WL+S+    V+ ++ 
Sbjct: 236 NALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNF 295

Query: 115 GSFLSVSSAQMDEILAGLQMSGVRFLRVARGDASRLNQT-------CGDTGQILPWSWCD 167
           GS   ++  Q+ E   GL      FL + R D                   + L  SWC 
Sbjct: 296 GSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCP 355

Query: 168 QLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKK 227
           Q ++  H S GGFLTH G NS  +     +    + F  DQ  +   I   W+IG  +  
Sbjct: 356 QDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT 415

Query: 228 EI 229
            +
Sbjct: 416 NV 417
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 Back     information, alignment and structure
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 Back     information, alignment and structure
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 Back     information, alignment and structure
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 Back     information, alignment and structure
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 Back     information, alignment and structure
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 Back     information, alignment and structure
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query231
d2c1xa1450 UDP glucose:flavonoid 3-o-glucosyltransferase {Gra 100.0
d2pq6a1473 (Iso)flavonoid glycosyltransferase {Medicago trunc 100.0
d2vcha1471 Hydroquinone glucosyltransferase {Thale cress (Ara 100.0
d2acva1461 Triterpene UDP-glucosyl transferase UGT71G1 {Medic 100.0
d1rrva_401 TDP-vancosaminyltransferase GftD {Amycolatopsis or 99.97
d1iira_401 UDP-glucosyltransferase GtfB {Amycolatopsis orient 99.97
d1pn3a_391 TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi 99.96
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 99.6
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 92.51
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 88.03
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 85.72
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=100.00  E-value=2.2e-42  Score=306.57  Aligned_cols=137  Identities=25%  Similarity=0.359  Sum_probs=120.7

Q ss_pred             CCcccHHhhcCCCCCeEEEEecccCCCCCHHHHHHHHHHHhhCCCeEEEEEeCC-----ccccccccCCCceEEcCcccC
Q 047142           93 NDPDDIQWLDSQPVDFVLNISLGSFLSVSSAQMDEILAGLQMSGVRFLRVARGD-----ASRLNQTCGDTGQILPWSWCD  167 (231)
Q Consensus        93 ~~~~~~~wl~~~~~~~vvyvs~Gs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----~~~~~~~~~~~~~v~~~~w~P  167 (231)
                      .++++..|+...+.+++||+||||....+.+++.+++.+++..+++|+|++...     ++++..+.+.|+++..  |+|
T Consensus       251 ~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~--~~p  328 (450)
T d2c1xa1         251 NTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVP--WAP  328 (450)
T ss_dssp             ---CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEES--CCC
T ss_pred             chhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCCccccCChhhhhhccccccccc--cCC
Confidence            456788999998889999999999999999999999999999999999998654     2333445677888988  999


Q ss_pred             hhhhcccCCcceEEeCCCcchHHHHHHhCceEEeecccccchHHHHHHhhhcceEEEecccCCC
Q 047142          168 QLRISCHSSAGGFLTHRGSNSILKIFMLALLCSLFLFSLDQHPNSNQIVGNWKIGKRMKKEIGT  231 (231)
Q Consensus       168 q~~iL~h~~v~~fitHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~t  231 (231)
                      |.++|.||++++||||||+||++||+++|||||++|+++||+.||+|+++.+|+|+.++++..|
T Consensus       329 q~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t  392 (450)
T d2c1xa1         329 QAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT  392 (450)
T ss_dssp             HHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred             hHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcC
Confidence            9999999999999999999999999999999999999999999999998755999999887654
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure